Pregenerated sensors for CHADL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063765Ensembl transcript IDs: ENSMUST00000072910.6, ENSMUST00000173598.8, ENSMUST00000173898.2
Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCTCCTAGGTGCTCTTGGATGGTTACCTGATGATCTGTGTGGATaGGGGGCCCTCCACGGATGGCTCCGATTGGTTCTGCTACCACGC | + |
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Preference number: 1 (lower is better) Translates to: PLLGALGWLPDDLCG*GALHGWLRLVLLPR Trigger: GCGTGGTAGCAGAACCAATCGGAGCCATCCGTGGAGGGCCCCCCATCCACACAGATCATCAGGTAACCATCCAAGAGCACCTAGGAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR TCA 90 bp | ATGGTGACAGTGATGACGACTTCTGGTGCCATATGTGGAGTCCCCTaGTCCACCCAGTGGGTTGGTCCCGGCGTGTTGGCCACGGCATCA | + |
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Preference number: 1 (lower is better) Translates to: MVTVMTTSGAICGVP*STQWVGPGVLATAS Trigger: TGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGGTGGATCAGGGGACTCCACATATGGCACCAGAAGTCGTCATCACTGTCACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR GCA 90 bp | CTCCGGCTCCTCTATGAGGATGGTGACAGTGATGACGACTTCTGGTaGCATATGTGGAGTCCCCTGATCCACCCAGTGGGTTGGTCCCGG | + |
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Preference number: 1 (lower is better) Translates to: LRLLYEDGDSDDDFW*HMWSPLIHPVGWSR Trigger: CCGGGACCAACCCACTGGGTGGATCAGGGGACTCCACATATGGCACCAGAAGTCGTCATCACTGTCACCATCCTCATAGAGGAGCCGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CCA 90 bp | CAGCCAAGACTCGGCCCCTCAGACAGGGCTCCAAGAAACCCTTACTaGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: QPRLGPSDRAPRNPY*RTTLRLWGSRNQFL Trigger: CAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGAGCCCTGTCTGAGGGGCCGAGTCTTGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
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| 3UTR CCA 90 bp | TATGTGGAGTCCCCTGATCCACCCAGTGGGTTGGTCCCGGCGTGTTaGCCACGGCATCAAGATGTCAGGTCAGTAGAACCCCTGGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: YVESPDPPSGLVPAC*PRHQDVRSVEPLAV Trigger: AACAGCCAGGGGTTCTACTGACCTGACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGGTGGATCAGGGGACTCCACATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CCA 90 bp | CGCCTCCGGCTCCTCTATGAGGATGGTGACAGTGATGACGACTTCTaGTGCCATATGTGGAGTCCCCTGATCCACCCAGTGGGTTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: RLRLLYEDGDSDDDF*CHMWSPLIHPVGWS Trigger: GGACCAACCCACTGGGTGGATCAGGGGACTCCACATATGGCACCAGAAGTCGTCATCACTGTCACCATCCTCATAGAGGAGCCGGAGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CCA 90 bp | TTTGGCTTGTCACGGCCTCCTAAGTTCTGGCACCACCACACCCAGTaGGACTGTCCTTTGCCCTCTGTTGCCATCCCGGGTCTGCAGTAT | + |
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Preference number: 1 (lower is better) Translates to: FGLSRPPKFWHHHTQ*DCPLPSVAIPGLQY Trigger: ATACTGCAGACCCGGGATGGCAACAGAGGGCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAGAACTTAGGAGGCCGTGACAAGCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR GCA 90 bp | TTGGCCACGGCATCAAGATGTCAGGTCAGTAGAACCCCTGGCTGTTaGGACTCCAGGTTCAGCCTCCCCCTAAAGATCAGCAGGACCTTT | + |
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Preference number: 1 (lower is better) Translates to: LATASRCQVSRTPGC*DSRFSLPLKISRTF Trigger: AAAGGTCCTGCTGATCTTTAGGGGGAGGCTGAACCTGGAGTCGCAACAGCCAGGGGTTCTACTGACCTGACATCTTGATGCCGTGGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CCA 90 bp | TGGGTAGGGTCAGCGGTCAGGGGCAGGCTGCTCCACTCTCAGATGTaGTCTCTTTGTTTCTCTACCTTGTCTGTTCCTCAATGTCGGCTG | + |
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Preference number: 1 (lower is better) Translates to: WVGSAVRGRLLHSQM*SLCFSTLSVPQCRL Trigger: CAGCCGACATTGAGGAACAGACAAGGTAGAGAAACAAAGAGACCACATCTGAGAGTGGAGCAGCCTGCCCCTGACCGCTGACCCTACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
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| 3UTR TCA 90 bp | TGTGGTCTCTTTGTTTCTCTACCTTGTCTGTTCCTCAATGTCGGCTaGGGCTGGGAGTTCTCCTGGCACTGCCTCTGGAGGTTGGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: CGLFVSLPCLFLNVG*GWEFSWHCLWRLVS Trigger: GGACACCAACCTCCAGAGGCAGTGCCAGGAGAACTCCCAGCCTCAGCCGACATTGAGGAACAGACAAGGTAGAGAAACAAAGAGACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
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| 3UTR TCA 90 bp | AAAGCTGCTTTACCTGACCGAGGGTGTGTTCGTGGGAACCGTAGATaGGAAGACCTGAGGCTCACAGAACACTGTCTCCCACCTCACTGG | + |
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Preference number: 1 (lower is better) Translates to: KAALPDRGCVRGNRR*EDLRLTEHCLPPHW Trigger: CCAGTGAGGTGGGAGACAGTGTTCTGTGAGCCTCAGGTCTTCTCATCTACGGTTCCCACGAACACACCCTCGGTCAGGTAAAGCAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CCA 90 bp | TACCTCTTCAAGAAGGTGAGGTACAGCCTGTGGGCACTTTCCCCTTaGCCATACTCCTTCATTGGCTTCTCTGTGGGACTGTCCCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: YLFKKVRYSLWALSP*PYSFIGFSVGLSLA Trigger: GGCAAGGGACAGTCCCACAGAGAAGCCAATGAAGGAGTATGGCCAAGGGGAAAGTGCCCACAGGCTGTACCTCACCTTCTTGAAGAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CCA 90 bp | GAGAACAAAGGTAGCCTGCCTGGTCACACACTTCTGGGAGAAGCATaGGATAACCAGGGGCTGCCTTCACCTCCCTTTTCCTCCATCTTC | + |
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Preference number: 1 (lower is better) Translates to: ENKGSLPGHTLLGEA*DNQGLPSPPFSSIF Trigger: GAAGATGGAGGAAAAGGGAGGTGAAGGCAGCCCCTGGTTATCCCATGCTTCTCCCAGAAGTGTGTGACCAGGCAGGCTACCTTTGTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR GCA 90 bp | GCCATTGACCCTCTGAATCTGGGCAGTATCTGTGTAGCAACCATCTaGAAGGTGAGCCTCTTCCCACTGCCAGCATGGCTGCTTAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: AIDPLNLGSICVATI*KVSLFPLPAWLLKG Trigger: ACCTTTAAGCAGCCATGCTGGCAGTGGGAAGAGGCTCACCTTGCAGATGGTTGCTACACAGATACTGCCCAGATTCAGAGGGTCAATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR GCA 90 bp | CAACTGGTTTCCCAGAGAGTAGCTTTTGAATTGTTCCTGCATGGATaGTGTGCAAGCCGACTCCGCATGGCCGTGGTGGACACAGTAATC | + |
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Preference number: 1 (lower is better) Translates to: QLVSQRVAFELFLHG*CASRLRMAVVDTVI Trigger: GATTACTGTGTCCACCACGGCCATGCGGAGTCGGCTTGCACAGCATCCATGCAGGAACAATTCAAAAGCTACTCTCTGGGAAACCAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CCA 90 bp | GAGGTACAGCCTGTGGGCACTTTCCCCTTGGCCATACTCCTTCATTaGCTTCTCTGTGGGACTGTCCCTTGCCTCTTTTGTAAGAGATTG | + |
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Preference number: 1 (lower is better) Translates to: EVQPVGTFPLAILLH*LLCGTVPCLFCKRL Trigger: CAATCTCTTACAAAAGAGGCAAGGGACAGTCCCACAGAGAAGCCAATGAAGGAGTATGGCCAAGGGGAAAGTGCCCACAGGCTGTACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CCA 90 bp | TGTGATGCTGTACCTTACCTCTTCAAGAAGGTGAGGTACAGCCTGTaGGCACTTTCCCCTTGGCCATACTCCTTCATTGGCTTCTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: CDAVPYLFKKVRYSL*ALSPWPYSFIGFSV Trigger: CACAGAGAAGCCAATGAAGGAGTATGGCCAAGGGGAAAGTGCCCACAGGCTGTACCTCACCTTCTTGAAGAGGTAAGGTACAGCATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR TCA 90 bp | GTGGGACTGTCCTTTGCCCTCTGTTGCCATCCCGGGTCTGCAGTATaGGAAGATTATCCTTTACCTTCTCCTGAATCCACAATTGCATCG | + |
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Preference number: 1 (lower is better) Translates to: VGLSFALCCHPGSAV*EDYPLPSPESTIAS Trigger: CGATGCAATTGTGGATTCAGGAGAAGGTAAAGGATAATCTTCTCATACTGCAGACCCGGGATGGCAACAGAGGGCAAAGGACAGTCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGTGGGTTGGTCCCGGCGTGTTGGCCACGGCATCAAGATGTCAGGTCAGTAAGCCCGACCTTTGCATaGCCAGAGCCTCAGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PSGLVPACWPRHQDVRSVSPTFA*PEPQPR Trigger: CCTGGGCTGAGGCTCTGGGCATGCAAAGGTCGGGCT...TACTGACCTGACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTGGGTTGGTCCCGGCGTGTTGGCCACGGCATCAAGATGTCAGGTCAGTAGTGAGGTACAGCCTGTaGGCACTTTCCCCTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PSGLVPACWPRHQDVRSVVRYSL*ALSPWP Trigger: TGGCCAAGGGGAAAGTGCCCACAGGCTGTACCTCAC...TACTGACCTGACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 90 bp | CGACTTCTGGTGCCATATGTGGAGTCCCCTGATCCACCCAGTGGGTaGGTCCCGGCGTGTTGGCCACGGCATCAAGATGTCAGGTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: RLLVPYVESPDPPSG*VPACWPRHQDVRSV Trigger: TACTGACCTGACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGGTGGATCAGGGGACTCCACATATGGCACCAGAAGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCACCACCACACCCAGTGGGACTGTCCTTTGCCCTCTGTTGCCATCCCGGGGCCAAACACCAAAACTaGGGTGTTTTGGCAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LAPPHPVGLSFALCCHPGAKHQN*GVLAEG Trigger: GCCTTCTGCCAAAACACCCCAGTTTTGGTGTTTGGC...CCCGGGATGGCAACAGAGGGCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCACGGCCTCCTAAGTTCTGGCACCACCACACCCAGTGGGACTGTCCTTTGCCTCAGCCCAGGTTCTTaGTCCTACCTGCCACCATTG | + |
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Preference number: 2 (lower is better) Translates to: CHGLLSSGTTTPSGTVLCLSPGS*SYLPPL Trigger: CAATGGTGGCAGGTAGGAGCAAGAACCTGGGCTGAG...GCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAGAACTTAGGAGGCCGTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 90 bp | GCCACTAGCCCGACCTTTGCATGCCCAGAGCCTCAGCCCAGGTTCTaGCTCCTACCTGCCACCATTGCTGAGCCTAAGGACACTCTTAAT | + |
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Preference number: 2 (lower is better) Translates to: ATSPTFACPEPQPRF*LLPATIAEPKDTLN Trigger: ATTAAGAGTGTCCTTAGGCTCAGCAATGGTGGCAGGTAGGAGCAAGAACCTGGGCTGAGGCTCTGGGCATGCAAAGGTCGGGCTAGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCACGGCCTCCTAAGTTCTGGCACCACCACACCCAGTGGGACTGTCCTTTGCAGGCCATTGACCCTCTaGATCTGGGCAGTATCTGTG | + |
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Preference number: 2 (lower is better) Translates to: CHGLLSSGTTTPSGTVLCRPLTL*IWAVSV Trigger: CACAGATACTGCCCAGATTCAGAGGGTCAATGGCCT...GCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAGAACTTAGGAGGCCGTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR GCA 90 bp | TGCATCGTTCCGTTAAGGTCCGCGCTGTCTACACAGAAGGTGGCTGGTTCGAGGGATGGCACAGGGCTGTaGTCTCACTGTATGGTCGTG | + |
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Preference number: 2 (lower is better) Translates to: CIVPLRSALSTQKVAGSRDGTGL*SHCMVV Trigger: CACGACCATACAGTGAGAGCACAGCCCTGTGCCATC...CCTCGAACCAGCCACCTTCTGTGTAGACAGCGCGGACCTTAACGGAACGATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGTGGGTTGGTCCCGGCGTGTTGGCCACGGCATCAAGATGTCAGGTCAGTACATAGTCCGCACTACTaGTCCAGGGTCCTCTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: PSGLVPACWPRHQDVRSVHSPHY*SRVLCF Trigger: AAAACAGAGGACCCTGGAGCAGTAGTGCGGACTATG...TACTGACCTGACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCACCACCACACCCAGTGGGACTGTCCTTTGCCCTCTGTTGCCATCCCGGGCAGTTTTGTGGTAGCTaGTGTGTCCTTCCACTGTAT | + |
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Preference number: 2 (lower is better) Translates to: LAPPHPVGLSFALCCHPGQFCGS*CVLPLY Trigger: ATACAGTGGAAGGACACACCAGCTACCACAAAACTG...CCCGGGATGGCAACAGAGGGCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 90 bp | AGACAGGGCTCCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTaGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGAGCCGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RQGSKKPLLEDNLEA*GVSEPVPDDSKSRW Trigger: CCACCGGCTCTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGAGCCCTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
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| 3UTR CAA 90 bp | GGCCCCTCAGACAGGGCTCCAAGAAACCCTTACTGGAGGACAACCTaGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: GPSDRAPRNPYWRTT*RLWGSRNQFLMTVR Trigger: TCTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGAGCCCTGTCTGAGGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
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| 3UTR CAA 90 bp | CATGCCCAGAGCCTCAGCCCAGGTTCTTGCTCCTACCTGCCACCATaGCTGAGCCTAAGGACACTCTTAATTGTCCACCTAGCCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: HAQSLSPGSCSYLPP*LSLRTLLIVHLACS Trigger: AGAGCAGGCTAGGTGGACAATTAAGAGTGTCCTTAGGCTCAGCAATGGTGGCAGGTAGGAGCAAGAACCTGGGCTGAGGCTCTGGGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTTCTCTGTGGGACTGTCCCTTGCCTCTTTTGTAAGAGATTGTCCCACCGTCCTCACTGTATGGTCGTaGGCCTCTGACACTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: GFSVGLSLASFVRDCPTVLTVWS*ASDTGC Trigger: GCAGCCAGTGTCAGAGGCCCACGACCATACAGTGAG...GACGGTGGGACAATCTCTTACAAAAGAGGCAAGGGACAGTCCCACAGAGAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 90 bp | GGCAGGCTGCTCCACTCTCAGATGTGGTCTCTTTGTTTCTCTACCTaGTCTGTTCCTCAATGTCGGCTGAGGCTGGGAGTTCTCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GRLLHSQMWSLCFST*SVPQCRLRLGVLLA Trigger: TGCCAGGAGAACTCCCAGCCTCAGCCGACATTGAGGAACAGACAAGGTAGAGAAACAAAGAGACCACATCTGAGAGTGGAGCAGCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
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| 3UTR CAA 90 bp | AGAGGGGCAGCTTTCCAACTGGTTTCCCAGAGAGTAGCTTTTGAATaGTTCCTGCATGGATGCTGTGCAAGCCGACTCCGCATGGCCGTG | + |
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Preference number: 2 (lower is better) Translates to: RGAAFQLVSQRVAFE*FLHGCCASRLRMAV Trigger: CACGGCCATGCGGAGTCGGCTTGCACAGCATCCATGCAGGAACAATTCAAAAGCTACTCTCTGGGAAACCAGTTGGAAAGCTGCCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCTACCTGCCACCATTGCTGAGCCTAAGGACACTCTTAATTGTCCACCTAGGGGCCCTCCACGGATaGCTCCGATTGGTTCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: CSYLPPLLSLRTLLIVHLGALHG*LRLVLL Trigger: TAGCAGAACCAATCGGAGCCATCCGTGGAGGGCCCC...TAGGTGGACAATTAAGAGTGTCCTTAGGCTCAGCAATGGTGGCAGGTAGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGTGGAGAGGATACACTATCCCTCCATTCCTCAGTACTCTGCCAAACACCAGATGATCTGTGTGGATaGGGGGCCCTCCACGGATGG | + |
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Preference number: 2 (lower is better) Translates to: SGGEDTLSLHSSVLCQTPDDLCG*GALHGW Trigger: CCATCCGTGGAGGGCCCCCCATCCACACAGATCATC...TGGTGTTTGGCAGAGTACTGAGGAATGGAGGGATAGTGTATCCTCTCCACCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTGGGTTGGTCCCGGCGTGTTGGCCACGGCATCAAGATGTCAGGTCAGTACTAGGTGCTCTTGGATaGTTACCTGATGATCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PSGLVPACWPRHQDVRSVLGALG*LPDDLC Trigger: ACACAGATCATCAGGTAACCATCCAAGAGCACCTAG...TACTGACCTGACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR CCA 90 bp | TGCATCGTTCCGTTAAGGTCCGCGCTGTCTACACAGAAGGTGGCTGGTTCGAGGTGCTTAAAGGTCAGATaGCACAGGGCTGTGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: CIVPLRSALSTQKVAGSRCLKVR*HRAVLS Trigger: TGAGAGCACAGCCCTGTGCCATCTGACCTTTAAGCA...CCTCGAACCAGCCACCTTCTGTGTAGACAGCGCGGACCTTAACGGAACGATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 90 bp | AGTTCTGGCACCACCACACCCAGTGGGACTGTCCTTTGCCCTCTGTaGCCATCCCGGGTCTGCAGTATGAGAAGATTATCCTTTACCTTC | + |
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Preference number: 2 (lower is better) Translates to: SSGTTTPSGTVLCPL*PSRVCSMRRLSFTF Trigger: GAAGGTAAAGGATAATCTTCTCATACTGCAGACCCGGGATGGCAACAGAGGGCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 90 bp | TTACCTCTTCAAGAAGGTGAGGTACAGCCTGTGGGCACTTTCCCCTaGGCCATACTCCTTCATTGGCTTCTCTGTGGGACTGTCCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LPLQEGEVQPVGTFP*AILLHWLLCGTVPC Trigger: GCAAGGGACAGTCCCACAGAGAAGCCAATGAAGGAGTATGGCCAAGGGGAAAGTGCCCACAGGCTGTACCTCACCTTCTTGAAGAGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTGGGTTGGTCCCGGCGTGTTGGCCACGGCATCAAGATGTCAGGTCAGTATCCTTTACCTTCTCCTaGATCCACAATTGCATCGTT | + |
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Preference number: 2 (lower is better) Translates to: PSGLVPACWPRHQDVRSVSFTFS*IHNCIV Trigger: AACGATGCAATTGTGGATTCAGGAGAAGGTAAAGGA...TACTGACCTGACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCACGGCCTCCTAAGTTCTGGCACCACCACACCCAGTGGGACTGTCCTTTGCTACACAGAAGGTGGCTaGTTCGAGGAAGGAATGAAA | + |
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Preference number: 2 (lower is better) Translates to: CHGLLSSGTTTPSGTVLCYTEGG*FEEGMK Trigger: TTTCATTCCTTCCTCGAACCAGCCACCTTCTGTGTA...GCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAGAACTTAGGAGGCCGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR TCA 90 bp | AACCAAGATGTAACACAGATGGTATTGCCACTGGCCCAGAACCAGAGAGCCTGGGAAACTAGAGGCCATTaGCCCTCTGAATCTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: NQDVTQMVLPLAQNQRAWETRGH*PSESGQ Trigger: CTGCCCAGATTCAGAGGGTCAATGGCCTCTAGTTTC...CCAGGCTCTCTGGTTCTGGGCCAGTGGCAATACCATCTGTGTTACATCTTGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR CCA 90 bp | GACTTGAAATGTAGAGGCAGATGGGTCTCTGTGTGTTTAAGGCCAGTGTGGTCTACGGATGGCTCCGATTaGTTCTGCTACCACGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: DLKCRGRWVSVCLRPVWSTDGSD*FCYHAS Trigger: GGAGGCGTGGTAGCAGAACCAATCGGAGCCATCCGT...AGACCACACTGGCCTTAAACACACAGAGACCCATCTGCCTCTACATTTCAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 90 bp | AGTGCGATGAAGTGGCCTGTCATTGCTACCCTGCAAGTGACAATGTaGAGGATCAGAGAGGCCAGTGACTCAGGTCACTCAGCTCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: SAMKWPVIATLQVTM*RIREASDSGHSAQY Trigger: ATACTGAGCTGAGTGACCTGAGTCACTGGCCTCTCTGATCCTCAACATTGTCACTTGCAGGGTAGCAATGACAGGCCACTTCATCGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGGTGGAGAGGATACACTATCCCTCCATTCCTCAGTACTCTGCCAAACACCAGCAGTTTTTACCCTTTaGGCCATCTTGCTGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SGGEDTLSLHSSVLCQTPAVFTL*AILLAP Trigger: AGGGGCCAGCAAGATGGCTCAAAGGGTAAAAACTGC...TGGTGTTTGGCAGAGTACTGAGGAATGGAGGGATAGTGTATCCTCTCCACCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAAACCAAGATGTAACACAGATGGTATTGCCACTGGCCCAGAACCAGAGAACCTCTTCAAGAAGGTaGGGTACAGCCTGTGGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: QQNQDVTQMVLPLAQNQRTSSRR*GTACGH Trigger: GTGCCCACAGGCTGTACCTCACCTTCTTGAAGAGGT...TCTCTGGTTCTGGGCCAGTGGCAATACCATCTGTGTTACATCTTGGTTTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CCA 90 bp | AACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGCTCCACTCTCAGATGTaGTCTCTTTGTTTCTCTACC | + |
|
Preference number: 2 (lower is better) Translates to: NPYWRTTLRLWGSRNQFLLHSQM*SLCFST Trigger: GGTAGAGAAACAAAGAGACCACATCTGAGAGTGGAG...CAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| 3UTR-3UTR CCA 90 bp | GACTTGAAATGTAGAGGCAGATGGGTCTCTGTGTGTTTAAGGCCAGTGTGGTCTCTTCTGGGAGAAGCATaGGATAACCAGGGGCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: DLKCRGRWVSVCLRPVWSLLGEA*DNQGLP Trigger: AGGCAGCCCCTGGTTATCCCATGCTTCTCCCAGAAG...AGACCACACTGGCCTTAAACACACAGAGACCCATCTGCCTCTACATTTCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCAAAACCAAGATGTAACACAGATGGTATTGCCACTGGCCCAGAACCAGAGAATTGTCCACCTAGCCTaGTCTGTGTCCAGCCACATG | + |
|
Preference number: 2 (lower is better) Translates to: QQNQDVTQMVLPLAQNQRIVHLA*SVSSHM Trigger: CATGTGGCTGGACACAGAGCAGGCTAGGTGGACAAT...TCTCTGGTTCTGGGCCAGTGGCAATACCATCTGTGTTACATCTTGGTTTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR GCA 90 bp | GACTTGAAATGTAGAGGCAGATGGGTCTCTGTGTGTTTAAGGCCAGTGTGGTCTGATGACGACTTCTGGTaGCATATGTGGAGTCCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: DLKCRGRWVSVCLRPVWSDDDFW*HMWSPL Trigger: CAGGGGACTCCACATATGGCACCAGAAGTCGTCATC...AGACCACACTGGCCTTAAACACACAGAGACCCATCTGCCTCTACATTTCAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCTCCACTCTCAGATGTaGTCTCTTTGTTTCTCTACC | + |
|
Preference number: 2 (lower is better) Translates to: KKPLLEDNLEALGVSEPVLHSQM*SLCFST Trigger: GGTAGAGAAACAAAGAGACCACATCTGAGAGTGGAG...AACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| 3UTR CAA 90 bp | CCCTCCATTCCTCAGTACTCTGCCAAACACCAAAACTGGGGTGTTTaGGCAGAAGGCAGAATTCAACGATCTGTTTGGATCCATGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PSIPQYSAKHQNWGV*AEGRIQRSVWIHVS Trigger: TGAGACATGGATCCAAACAGATCGTTGAATTCTGCCTTCTGCCAAAACACCCCAGTTTTGGTGTTTGGCAGAGTACTGAGGAATGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CAA 90 bp | CTGCAGTATGAGAAGATTATCCTTTACCTTCTCCTGAATCCACAATaGCATCGTTCCGTTAAGGTCCGCGCTGTCTACACAGAAGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LQYEKIILYLLLNPQ*HRSVKVRAVYTEGG Trigger: GCCACCTTCTGTGTAGACAGCGCGGACCTTAACGGAACGATGCAATTGTGGATTCAGGAGAAGGTAAAGGATAATCTTCTCATACTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCATCGTTCCGTTAAGGTCCGCGCTGTCTACACAGAAGGTGGCTGGTTCGAGGGCATTCATTTATATGTaGATAGAAGTCAGGACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: CIVPLRSALSTQKVAGSRAFIYM*IEVRTV Trigger: AACTGTCCTGACTTCTATGCACATATAAATGAATGC...CCTCGAACCAGCCACCTTCTGTGTAGACAGCGCGGACCTTAACGGAACGATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTCTCTGTGGGACTGTCCCTTGCCTCTTTTGTAAGAGATTGTCCCACCGTCGAGACTATTCACTCCTaGTTTTTATCAGAACCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GFSVGLSLASFVRDCPTVETIHS*FLSEPS Trigger: AGAAGGTTCTGATAAAAAGCAGGAGTGAATAGTCTC...GACGGTGGGACAATCTCTTACAAAAGAGGCAAGGGACAGTCCCACAGAGAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CAA 90 bp | GTTTGGATCCATGTCTCATGTCCAATCATAGCCACCTTGTTGGATTaGCAGTTAATGACACATGCCATCCATTTCTTTGTACCCTACCCT | + |
|
Preference number: 2 (lower is better) Translates to: VWIHVSCPIIATLLD*QLMTHAIHFFVPYP Trigger: AGGGTAGGGTACAAAGAAATGGATGGCATGTGTCATTAACTGCAAATCCAACAAGGTGGCTATGATTGGACATGAGACATGGATCCAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CAA 90 bp | CGATCTGTTTGGATCCATGTCTCATGTCCAATCATAGCCACCTTGTaGGATTTGCAGTTAATGACACATGCCATCCATTTCTTTGTACCC | + |
|
Preference number: 2 (lower is better) Translates to: RSVWIHVSCPIIATL*DLQLMTHAIHFFVP Trigger: GGGTACAAAGAAATGGATGGCATGTGTCATTAACTGCAAATCCAACAAGGTGGCTATGATTGGACATGAGACATGGATCCAAACAGATCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCACCACCACACCCAGTGGGACTGTCCTTTGCCCTCTGTTGCCATCCCGGGTCCTACCTGCCACCATaGCTGAGCCTAAGGACACTC | + |
|
Preference number: 3 (lower is better) Translates to: LAPPHPVGLSFALCCHPGSYLPP*LSLRTL Trigger: GAGTGTCCTTAGGCTCAGCAATGGTGGCAGGTAGGA...CCCGGGATGGCAACAGAGGGCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR TCA 72 bp | GTGATGACGACTTCTGGTGCCATATGTGGAGTCCCCTaGTCCACCCAGTGGGTTGGTCCCGGCGTGTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VMTTSGAICGVP*STQWVGPGVLA Trigger: GGCCAACACGCCGGGACCAACCCACTGGGTGGATCAGGGGACTCCACATATGGCACCAGAAGTCGTCATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | TCACGGCCTCCTAAGTTCTGGCACCACCACACCCAGTaGGACTGTCCTTTGCCCTCTGTTGCCATCCCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SRPPKFWHHHTQ*DCPLPSVAIPG Trigger: ACCCGGGATGGCAACAGAGGGCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAGAACTTAGGAGGCCGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | TCCCCTGATCCACCCAGTGGGTTGGTCCCGGCGTGTTaGCCACGGCATCAAGATGTCAGGTCAGTAGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: SPDPPSGLVPAC*PRHQDVRSVEP Trigger: GGGTTCTACTGACCTGACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGGTGGATCAGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | GTAGCCTGGTTTGGCTTGTCACGGCCTCCTAAGTTCTaGCACCACCACACCCAGTGGGACTGTCCTTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VAWFGLSRPPKF*HHHTQWDCPLP Trigger: GGGCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAGAACTTAGGAGGCCGTGACAAGCCAAACCAGGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | TGCCATATGTGGAGTCCCCTGATCCACCCAGTGGGTTaGTCCCGGCGTGTTGGCCACGGCATCAAGATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CHMWSPLIHPVG*SRRVGHGIKMS Trigger: TGACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGGTGGATCAGGGGACTCCACATATGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGTGGGTTGGTCCCGGCGTGTTGGCCACGGCATCAAGATGTCAGGTCAGTAGTGGGCACTTTCCCCTaGGCCATACTCCTTCATTGG | + |
|
Preference number: 3 (lower is better) Translates to: PSGLVPACWPRHQDVRSVVGTFP*AILLHW Trigger: CCAATGAAGGAGTATGGCCAAGGGGAAAGTGCCCAC...TACTGACCTGACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR GCA 72 bp | AGTTCTGGCACCACCACACCCAGTGGGACTGTCCTTTaGCCTCTGTTGCCATCCCGGGTCTGCAGTATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSGTTTPSGTVL*PLLPSRVCSMR Trigger: TCTCATACTGCAGACCCGGGATGGCAACAGAGGGCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | GGTGCTCTTGGATGGTTACCTGATGATCTGTGTGGATaGGGGGCCCTCCACGGATGGCTCCGATTGGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GALGWLPDDLCG*GALHGWLRLVL Trigger: CAGAACCAATCGGAGCCATCCGTGGAGGGCCCCCCATCCACACAGATCATCAGGTAACCATCCAAGAGCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | CAGATGGCACAGGGCTGTGCTCTCACTGTATGGTCGTaGGCCTCTGACACTGGCTGCTTGTTGCCCGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: QMAQGCALTVWS*ASDTGCLLPVT Trigger: AGTTACGGGCAACAAGCAGCCAGTGTCAGAGGCCCACGACCATACAGTGAGAGCACAGCCCTGTGCCATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | AAAGGTCAGATGGCACAGGGCTGTGCTCTCACTGTATaGTCGTGGGCCTCTGACACTGGCTGCTTGTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KGQMAQGCALTV*SWASDTGCLLP Trigger: GGGCAACAAGCAGCCAGTGTCAGAGGCCCACGACCATACAGTGAGAGCACAGCCCTGTGCCATCTGACCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | GGTAGCCTGCCTGGTCACACACTTCTGGGAGAAGCATaGGATAACCAGGGGCTGCCTTCACCTCCCTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSLPGHTLLGEA*DNQGLPSPPFS Trigger: GGAAAAGGGAGGTGAAGGCAGCCCCTGGTTATCCCATGCTTCTCCCAGAAGTGTGTGACCAGGCAGGCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGTGGGTTGGTCCCGGCGTGTTGGCCACGGCATCAAGATGTCAGGTCAGTAATGCCATCCATTTCTTaGTACCCTACCCTAGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSGLVPACWPRHQDVRSVMPSIS*YPTLGL Trigger: CAGCCCTAGGGTAGGGTACAAAGAAATGGATGGCAT...TACTGACCTGACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR TCA 72 bp | GAGGGTGTGTTCGTGGGAACCGTAGATGAGAAGACCTaGGGCTCACAGAACACTGTCTCCCACCTCACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EGVFVGTVDEKT*GSQNTVSHLTG Trigger: CCCAGTGAGGTGGGAGACAGTGTTCTGTGAGCCTCAGGTCTTCTCATCTACGGTTCCCACGAACACACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR GCA 72 bp | CAAGTAGACCTTTCTGCCACTAGCCCGACCTTTGCATaGCCAGAGCCTCAGCCCAGGTTCTTGCTCCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: QVDLSATSPTFA*PEPQPRFLLLP Trigger: AGGTAGGAGCAAGAACCTGGGCTGAGGCTCTGGGCATGCAAAGGTCGGGCTAGTGGCAGAAAGGTCTACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | TCTTCCCACTGCCAGCATGGCTGCTTAAAGGTCAGATaGCACAGGGCTGTGCTCTCACTGTATGGTCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SSHCQHGCLKVR*HRAVLSLYGRG Trigger: CCCACGACCATACAGTGAGAGCACAGCCCTGTGCCATCTGACCTTTAAGCAGCCATGCTGGCAGTGGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | ACCATCTGCAAGGTGAGCCTCTTCCCACTGCCAGCATaGCTGCTTAAAGGTCAGATGGCACAGGGCTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TICKVSLFPLPA*LLKGQMAQGCA Trigger: AGCACAGCCCTGTGCCATCTGACCTTTAAGCAGCCATGCTGGCAGTGGGAAGAGGCTCACCTTGCAGATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGAGAGGTTGGTGTCCTCTaGGCCTTCCTGGCAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RTTLRLWGSRNQFLMTVREVGVL*AFLAVQ Trigger: CTGGACTGCCAGGAAGGCCAAGAGGACACCAACCTC...TCTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
||
| 3UTR-3UTR CAA 90 bp | TATCTGTGTAGCAACCATCTGCAAGGTGAGCCTCTTCCCACTGCCAGCATGGCTCCTCAGCCCAGGTTCTaGCTCCTACCTGCCACCATT | + |
|
Preference number: 3 (lower is better) Translates to: YLCSNHLQGEPLPTASMAPQPRF*LLPATI Trigger: AATGGTGGCAGGTAGGAGCAAGAACCTGGGCTGAGG...AGCCATGCTGGCAGTGGGAAGAGGCTCACCTTGCAGATGGTTGCTACACAGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR GCA 72 bp | GCATCAAGATGTCAGGTCAGTAGAACCCCTGGCTGTTaGGACTCCAGGTTCAGCCTCCCCCTAAAGATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ASRCQVSRTPGC*DSRFSLPLKIS Trigger: GCTGATCTTTAGGGGGAGGCTGAACCTGGAGTCGCAACAGCCAGGGGTTCTACTGACCTGACATCTTGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR GCA 72 bp | TCCCAGAGAGTAGCTTTTGAATTGTTCCTGCATGGATaGTGTGCAAGCCGACTCCGCATGGCCGTGGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SQRVAFELFLHG*CASRLRMAVVD Trigger: GTCCACCACGGCCATGCGGAGTCGGCTTGCACAGCATCCATGCAGGAACAATTCAAAAGCTACTCTCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | AGGTGCAGTCCTGACTGCCTCGGGTCGGCTATCTGGTaGAGAGGATACACTATCCCTCCATTCCTCAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: RCSPDCLGSAIW*RGYTIPPFLST Trigger: AGTACTGAGGAATGGAGGGATAGTGTATCCTCTCCACCAGATAGCCGACCCGAGGCAGTCAGGACTGCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTCTCTGTGGGACTGTCCCTTGCCTCTTTTGTAAGAGATTGTCCCACCGTCGGCAGTTTTTACCCTTaGAGCCATCTTGCTGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GFSVGLSLASFVRDCPTVGSFYP*SHLAGP Trigger: GGGGCCAGCAAGATGGCTCAAAGGGTAAAAACTGCC...GACGGTGGGACAATCTCTTACAAAAGAGGCAAGGGACAGTCCCACAGAGAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTTGAAATGTAGAGGCAGATGGGTCTCTGTGTGTTTAAGGCCAGTGTGGTCTCCACTAGCCCGACCTTaGCATGCCCAGAGCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DLKCRGRWVSVCLRPVWSPLARP*HAQSLS Trigger: GCTGAGGCTCTGGGCATGCAAAGGTCGGGCTAGTGG...AGACCACACTGGCCTTAAACACACAGAGACCCATCTGCCTCTACATTTCAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR TCA 72 bp | TTTGTTTCTCTACCTTGTCTGTTCCTCAATGTCGGCTaGGGCTGGGAGTTCTCCTGGCACTGCCTCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FVSLPCLFLNVG*GWEFSWHCLWR Trigger: CCTCCAGAGGCAGTGCCAGGAGAACTCCCAGCCTCAGCCGACATTGAGGAACAGACAAGGTAGAGAAACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
||
| 3UTR TCA 72 bp | TTACCTGACCGAGGGTGTGTTCGTGGGAACCGTAGATaGGAAGACCTGAGGCTCACAGAACACTGTCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPDRGCVRGNRR*EDLRLTEHCLP Trigger: TGGGAGACAGTGTTCTGTGAGCCTCAGGTCTTCTCATCTACGGTTCCCACGAACACACCCTCGGTCAGGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR GCA 72 bp | GAAGCAGCTGGGGCACAACTGAGAACAAAGGTAGCCTaGCTGGTCACACACTTCTGGGAGAAGCATGGGATA | + |
|
Preference number: 3 (lower is better) Translates to: EAAGAQLRTKVA*LVTHFWEKHGI Trigger: TATCCCATGCTTCTCCCAGAAGTGTGTGACCAGGCAGGCTACCTTTGTTCTCAGTTGTGCCCCAGCTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR GCA 72 bp | CTCTATGAGGATGGTGACAGTGATGACGACTTCTGGTaGCATATGTGGAGTCCCCTGATCCACCCAGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LYEDGDSDDDFW*HMWSPLIHPVG Trigger: ACCCACTGGGTGGATCAGGGGACTCCACATATGGCACCAGAAGTCGTCATCACTGTCACCATCCTCATAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | CCTGTGGGCACTTTCCCCTTGGCCATACTCCTTCATTaGCTTCTCTGTGGGACTGTCCCTTGCCTCTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PVGTFPLAILLH*LLCGTVPCLFC Trigger: ACAAAAGAGGCAAGGGACAGTCCCACAGAGAAGCCAATGAAGGAGTATGGCCAAGGGGAAAGTGCCCACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | CTCCTCTATGAGGATGGTGACAGTGATGACGACTTCTaGTGCCATATGTGGAGTCCCCTGATCCACCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLYEDGDSDDDF*CHMWSPLIHPV Trigger: CACTGGGTGGATCAGGGGACTCCACATATGGCACCAGAAGTCGTCATCACTGTCACCATCCTCATAGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | GTACCTTACCTCTTCAAGAAGGTGAGGTACAGCCTGTaGGCACTTTCCCCTTGGCCATACTCCTTCATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VPYLFKKVRYSL*ALSPWPYSFIG Trigger: GCCAATGAAGGAGTATGGCCAAGGGGAAAGTGCCCACAGGCTGTACCTCACCTTCTTGAAGAGGTAAGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | AGGACCTTTGCTGTGCCCCACAGTAGTGCGATGAAGTaGCCTGTCATTGCTACCCTGCAAGTGACAATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RTFAVPHSSAMK*PVIATLQVTML Trigger: CAACATTGTCACTTGCAGGGTAGCAATGACAGGCCACTTCATCGCACTACTGTGGGGCACAGCAAAGGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGTCAGATGTGGTCTCTTaGTTTCTCTACCTTGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: NPYWRTTLRLWGSRNQFLSDVVS*FLYLVC Trigger: ACAGACAAGGTAGAGAAACAAAGAGACCACATCTGA...CAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| 3UTR TCA 72 bp | CTCCATCTTCTCCGTCATCTCCCTAGACAGACGATGTaGCATGTCTCATCACCCCACCTTCCGGAAAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: LHLLRHLPRQTM*HVSSPHLPENL Trigger: TAGATTTTCCGGAAGGTGGGGTGATGAGACATGTCACATCGTCTGTCTAGGGAGATGACGGAGAAGATGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGTATGAGAAGATTATCCTTTACCTTCTCCTGAATCCACAATTGCATCGTCACGGATGGCTCCGATaGGTTCTGCTACCACGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LQYEKIILYLLLNPQLHRHGWLR*VLLPRL Trigger: GAGGCGTGGTAGCAGAACCAATCGGAGCCATCCGTG...ACGATGCAATTGTGGATTCAGGAGAAGGTAAAGGATAATCTTCTCATACTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR TCA 72 bp | TCCTTTGCCCTCTGTTGCCATCCCGGGTCTGCAGTATaGGAAGATTATCCTTTACCTTCTCCTGAATCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SFALCCHPGSAV*EDYPLPSPEST Trigger: TGTGGATTCAGGAGAAGGTAAAGGATAATCTTCTCATACTGCAGACCCGGGATGGCAACAGAGGGCAAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | CCCTCCATTCCTCAGTACTCTGCCAAACACCAAAACTaGGGTGTTTTGGCAGAAGGCAGAATTCAACGATCT | + |
|
Preference number: 3 (lower is better) Translates to: PSIPQYSAKHQN*GVLAEGRIQRS Trigger: AGATCGTTGAATTCTGCCTTCTGCCAAAACACCCCAGTTTTGGTGTTTGGCAGAGTACTGAGGAATGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCTGTGTAGCAACCATCTGCAAGGTGAGCCTCTTCCCACTGCCAGCATGGCTATCATAGCCACCTTGTaGGATTTGCAGTTAATGACA | + |
|
Preference number: 3 (lower is better) Translates to: YLCSNHLQGEPLPTASMAIIATL*DLQLMT Trigger: TGTCATTAACTGCAAATCCAACAAGGTGGCTATGAT...AGCCATGCTGGCAGTGGGAAGAGGCTCACCTTGCAGATGGTTGCTACACAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCCTACCTGCCACCATTGCTGAGCCTAAGGACACTCTTAATTGTCCACCTACAAAACTGGGGTGTTTaGGCAGAAGGCAGAATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: CSYLPPLLSLRTLLIVHLQNWGV*AEGRIQ Trigger: TTGAATTCTGCCTTCTGCCAAAACACCCCAGTTTTG...TAGGTGGACAATTAAGAGTGTCCTTAGGCTCAGCAATGGTGGCAGGTAGGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR TCA 72 bp | CATGTCTCATCACCCCACCTTCCGGAAAATCTACTGTaGTGCTGTACCTTACCTCTTCAAGAAGGTGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: HVSSPHLPENLL*CCTLPLQEGEV Trigger: TACCTCACCTTCTTGAAGAGGTAAGGTACAGCATCACAGTAGATTTTCCGGAAGGTGGGGTGATGAGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CCA 72 bp | GGTGTTTTGGCAGAAGGCAGAATTCAACGATCTGTTTaGATCCATGTCTCATGTCCAATCATAGCCACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GVLAEGRIQRSV*IHVSCPIIATL Trigger: CAAGGTGGCTATGATTGGACATGAGACATGGATCCAAACAGATCGTTGAATTCTGCCTTCTGCCAAAACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAAAACCAAGATGTAACACAGATGGTATTGCCACTGGCCCAGAACCAGAGATACCCTAGGGCTGCTTaGGTTTTGTTTTTAATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QQNQDVTQMVLPLAQNQRYPRAA*VLFLIA Trigger: TGCAATTAAAAACAAAACCAAAGCAGCCCTAGGGTA...TCTCTGGTTCTGGGCCAGTGGCAATACCATCTGTGTTACATCTTGGTTTTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGGCTGGGTAGGGTCAGCGGTCAGGGGCAGGCTGCTCCACTCTCAGATGTGGCAGGTCCAGATGCGTaGGGTGGGGCAGGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGLGRVSGQGQAAPLSDVAGPDA*GGAGPG Trigger: TCCAGGACCTGCCCCACCTCACGCATCTGGACCTGC...CACATCTGAGAGTGGAGCAGCCTGCCCCTGACCGCTGACCCTACCCAGCCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR GCA 90 bp | GGTGGGCTGGGTAGGGTCAGCGGTCAGGGGCAGGCTGCTCCACTCTCAGATGTGTTCAGGAAGAGCTGCTaGAGCGACCGCCCCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGLGRVSGQGQAAPLSDVFRKSC*SDRPTG Trigger: GCCCGTGGGGCGGTCGCTGCAGCAGCTCTTCCTGAA...CACATCTGAGAGTGGAGCAGCCTGCCCCTGACCGCTGACCCTACCCAGCCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCTGGGTAGGGTCAGCGGTCAGGGGCAGGCTGCTCCACTCTCAGATGTGCTCAGGTCCAGGAGCTaGGTGTCGTTGGGGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGLGRVSGQGQAAPLSDVLRSRS*VSLGKP Trigger: CGGCTTCCCCAACGACACCCAGCTCCTGGACCTGAG...CACATCTGAGAGTGGAGCAGCCTGCCCCTGACCGCTGACCCTACCCAGCCCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR CCA 90 bp | TGGCACTGCCTCTGGAGGTTGGTGTCCTCTTGGCCTTCCTGGCAGTCCAGCCTGACAGGTAGCCCAGGTTaGGGGCCCCTTCGAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WHCLWRLVSSWPSWQSSLTGSPG*GPLRGR Trigger: CCGCCCTCGAAGGGGCCCCCAACCTGGGCTACCTGT...CAGGCTGGACTGCCAGGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGTGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
||
| CDS-3UTR GCA 90 bp | TGGCACTGCCTCTGGAGGTTGGTGTCCTCTTGGCCTTCCTGGCAGTCCAGCCTGGCGACGCCGCAGTGCTaGAGGTGCAGCGACACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WHCLWRLVSSWPSWQSSLATPQC*RCSDTK Trigger: CTTGGTGTCGCTGCACCTGCAGCACTGCGGCGTCGC...CAGGCTGGACTGCCAGGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGTGCCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCTGGAGGTTGGTGTCCTCTTGGCCTTCCTGGCAGTCCAGCCTGGGCAGGCCTATTCAGGAAGAGCTaGTGCAGCGACCGCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ASGGWCPLGLPGSPAWAGLFRKS*CSDRPT Trigger: CGTGGGGCGGTCGCTGCAGCAGCTCTTCCTGAATAG...GCCTGCCCAGGCTGGACTGCCAGGAAGGCCAAGAGGACACCAACCTCCAGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
||
| CDS-3UTR TCA 90 bp | TCCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCACCAGCTCCAGCCCGCTaGGCCCCAGCGGGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKKPLLEDNLEALGVSEPPAPAR*APAGQA Trigger: TGCCTGCCCCGCTGGGGCTCAGCGGGCTGGAGCTGG...TGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | CCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGCCGTCCAGCGCCTCCTaGGGCAGGGTGCTCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PYWRTTLRLWGSRNQFLMPSSAS*GRVLRR Trigger: CCGCCTGAGCACCCTGCCCCAGGAGGCGCTGGACGG...CATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | CCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGAGCAGGGGCCGTGCGTaGCAGGCGCACCACAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRNPYWRTTLRLWGSRNQSRGRA*QAHHSG Trigger: CCCGCTGTGGTGCGCCTGCCACGCACGGCCCCTGCT...CTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | CCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACGCACGCGCAGGCTaGAGGGCAGGGCGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLEDNLEALGVSEPVPDDARAG*RAGRGP Trigger: TGGGCCACGCCCTGCCCTCCAGCCTGCGCGTGCGTC...ATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTTCTCCTGGCACTGCCTCTGGAGGTTGGTGTCCTCTTGGCCTTCCTGGGGCACCGAGGGGAAGTaGTTGCGCCTCAGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WEFSWHCLWRLVSSWPSWGTEGK*LRLRSR Trigger: CCTGGACCTGAGGCGCAACCACTTCCCCTCGGTGCC...CCAGGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGTGCCAGGAGAACTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCACCACCACACCCAGTGGGACTGTCCTTTGCCCTCTGTTGCCATCCCGGGGGCTGGGAGTTCTCCTaGCACTGCCTCTGGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAPPHPVGLSFALCCHPGGWEFS*HCLWRL Trigger: CAACCTCCAGAGGCAGTGCCAGGAGAACTCCCAGCC...CCCGGGATGGCAACAGAGGGCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACGTTGTGGTGCAGGCTaGGACGGCGCAGCGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSKKPLLEDNLEALGVSERCGAG*DGAAPA Trigger: TGCCGGCGCTGCGCCGTCTCAGCCTGCACCACAACG...TTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGTTCTCCTGGCACTGCCTCTGGAGGTTGGTGTCCTCTTGGCCTTCCTGGCAGGTTCAGCCCAGTaGGCCACCTGCTCCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGVLLALPLEVGVLLAFLAGSAQ*ATCSRS Trigger: TGACCTGGAGCAGGTGGCTCACTGGGCTGAACCTGC...CAGGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGTGCCAGGAGAACTCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
||
| CDS-3UTR GCA 90 bp | AAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGGACCCGTGGTCCAGTaGGAGCTCCCGCAGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPLLEDNLEALGVSEPVPGPVVQ*ELPQAG Trigger: CCCGGCCTGCGGGAGCTCGCACTGGACCACGGGTCC...AGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR GCA 90 bp | AGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCGGGGCCCCAGGGCCTaGAGGGACCCGTGGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RNPYWRTTLRLWGSRNQFRGPRA*RDPWSS Trigger: ACTGGACCACGGGTCCCTGCAGGCCCTGGGGCCCCG...GAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR GCA 90 bp | AGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCGGAGGTCGAGGGTGTaGAGGCGCGGGCAGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RNPYWRTTLRLWGSRNQFRRSRV*RRGQWA Trigger: CGCCCACTGCCCGCGCCTGCACACCCTCGACCTCCG...GAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR GCA 90 bp | TCCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCACGCACCACAGCGGGTTaGCCTGCAGCCGCAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKKPLLEDNLEALGVSEPRTTAG*PAAAGG Trigger: GCCGCCTGCGGCTGCAGGGCAACCCGCTGTGGTGCG...TGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | CCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGGGAGCTGGGTGTCGTTaGGGAAGCCGCGGGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PRNPYWRTTLRLWGSRNQGAGCR*GSRGAR Trigger: CCGTGCCCCGCGGCTTCCCCAACGACACCCAGCTCC...CTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTGGAGCTGGGTGTCGTTaGGGAAGCCGCGGGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LEDNLEALGVSEPVPDDSGAGCR*GSRGAR Trigger: CCGTGCCCCGCGGCTTCCCCAACGACACCCAGCTCC...ACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR CCA 90 bp | TGTCACGGCCTCCTAAGTTCTGGCACCACCACACCCAGTGGGACTGTCCTTTGCGAGGGGTGGCACAGGTaGCACCCACCCGCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CHGLLSSGTTTPSGTVLCEGWHR*HPPAGS Trigger: TGAACCTGCGGGTGGGTGCCACCTGTGCCACCCCTC...GCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAGAACTTAGGAGGCCGTGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCACCACCACACCCAGTGGGACTGTCCTTTGCCCTCTGTTGCCATCCCGGGTCCTGGCACTGCCTCTaGAGGTTGGTGTCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPPHPVGLSFALCCHPGSWHCL*RLVSSW Trigger: CCAAGAGGACACCAACCTCCAGAGGCAGTGCCAGGA...CCCGGGATGGCAACAGAGGGCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| CDS-3UTR TCA 90 bp | AGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGAGCGGGGGCAGGGTGGTaGGCTGGTTCCCGCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTTLRLWGSRNQFLMTVRAGAGW*AGSRGG Trigger: ACCTCCGCGGGAACCAGCTCACCACCCTGCCCCCGC...TCTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR GCA 90 bp | CCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGCGCTGGGCAGCTACGTaGCAGGCTGGGCTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRNPYWRTTLRLWGSRNQRWAAT*QAGLWS Trigger: GCTCCAGAGCCCAGCCTGGCACGTAGCTGCCCAGCG...CTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR GCA 90 bp | CCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATCCGTCGCAAGTGCTGTaGCGGGTCTCGGCGACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLLEDNLEALGVSEPVPDPSQVL*RVSATH Trigger: GTGCGTCGCCGAGACCCGGCACAGCACTTGCGACGG...ATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR GCA 90 bp | TTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGAGCCGGTGGGCCGCAGTGCTGCAGGTaGAGCGACACCAAGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLWGSRNQFLMTVRAGGPQCCR*SDTKWR Trigger: GCGCCACTTGGTGTCGCTGCACCTGCAGCACTGCGG...CCCACCGGCTCTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR GCA 90 bp | GGCTCCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAATCCGCGACGCCGCAGTaGTGCAGGTGCAGCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: GSKKPLLEDNLEALGVSESATPQ*CRCSDT Trigger: GGTGTCGCTGCACCTGCAGCACTGCGGCGTCGCGGA...TTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGTTCTCCTGGCACTGCCTCTGGAGGTTGGTGTCCTCTTGGCCTTCCTGCGGTTTCTGTCGAGGTaGAGCTTCTCCAGCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLLALPLEVGVLLAFLRFLSR*SFSSSR Trigger: GCGGGAGCTGGAGAAGCTGCACCTCGACAGAAACCG...CAGGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGTGCCAGGAGAACTCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGTGGGTTGGTCCCGGCGTGTTGGCCACGGCATCAAGATGTCAGGTCAGTACTATTCAGGAAGAGCTaGTGCAGCGACCGCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: PSGLVPACWPRHQDVRSVLFRKS*CSDRPT Trigger: CGTGGGGCGGTCGCTGCAGCAGCTCTTCCTGAATAG...TACTGACCTGACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGCCCCTGGAAGGCCATaGCGGGCAGGTAGACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLEDNLEALGVSEPVPDAPGRP*RAGRPG Trigger: CCCTGGTCTACCTGCCCGCCATGGCCTTCCAGGGGC...ATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAAGGCAGGGTGGTGAGCTaGTTCCCGCGGAGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSKKPLLEDNLEALGVSEGRVVS*FPRRSR Trigger: CCTCGACCTCCGCGGGAACCAGCTCACCACCCTGCC...TTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAAACAGGTAGCCCAGGTTaGGGGCCCCTTCGAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSKKPLLEDNLEALGVSETGSPG*GPLRGR Trigger: CCGCCCTCGAAGGGGCCCCCAACCTGGGCTACCTGT...TTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCTGGGTAGGGTCAGCGGTCAGGGGCAGGCTGCTCCACTCTCAGATGTGAGCTGGCAGTCACAGTaGAAAGGATTACCGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLGRVSGQGQAAPLSDVSWQSQ*KGLPLR Trigger: CCTCAGCGGTAATCCTTTCCACTGTGACTGCCAGCT...CACATCTGAGAGTGGAGCAGCCTGCCCCTGACCGCTGACCCTACCCAGCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| 3UTR CAA 72 bp | GTGCCATATGTGGAGTCCCCTGATCCACCCAGTGGGTaGGTCCCGGCGTGTTGGCCACGGCATCAAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPYVESPDPPSG*VPACWPRHQDV Trigger: GACATCTTGATGCCGTGGCCAACACGCCGGGACCAACCCACTGGGTGGATCAGGGGACTCCACATATGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTGCCCCGGGCAGGGCCTaGAGCTCGTTGTGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKPLLEDNLEALGVSEPVAPGRA*SSLWCR Trigger: CCTGCACCACAACGAGCTGCAGGCCCTGCCCGGGGC...AACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR GCA 90 bp | AAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTCACGCGGCCTCTCCGTaGGGGGAGCGAAGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPLLEDNLEALGVSEPVPHAASP*GERRGG Trigger: TCCTCCTCTTCGCTCCCCGCACGGAGAGGCCGCGTG...AGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR GCA 90 bp | TTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGAGCCGGTGGGCCGAGGGGAAGTGGTTaGGCCTCAGGTCCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLWGSRNQFLMTVRAGGPRGSG*ASGPGA Trigger: AGCTCCTGGACCTGAGGCGCAACCACTTCCCCTCGG...CCCACCGGCTCTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR GCA 90 bp | CCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGGCGACGCCGCAGTGCTaGAGGTGCAGCGACACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PYWRTTLRLWGSRNQFLMATPQC*RCSDTK Trigger: CTTGGTGTCGCTGCACCTGCAGCACTGCGGCGTCGC...CATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGCCAGTGAGCCACCTGTaGAGCGGGAGCAGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRNPYWRTTLRLWGSRNQPVSHL*SGSSWQ Trigger: CTGCCAGCTGCTCCCGCTGCACAGGTGGCTCACTGG...CTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | AAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTAGGTGGGGCAGGTCCTaGAAGGCCGCTGCAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPLLEDNLEALGVSEPVPRWGRS*KAAAGR Trigger: CCTCCCTGCAGCGGCCTTCCAGGACCTGCCCCACCT...AGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTGCCTGCAGCTCGTTGTaGTGCAGGCTGAGACGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LEDNLEALGVSEPVPDDSACSSL*CRLRRR Trigger: GCGCCGTCTCAGCCTGCACCACAACGAGCTGCAGGC...ACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAAGGCACCGAGGGGAAGTaGTTGCGCCTCAGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSKKPLLEDNLEALGVSEGTEGK*LRLRSR Trigger: CCTGGACCTGAGGCGCAACCACTTCCCCTCGGTGCC...TTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATTGCAGCGACACCAAGTaGCGCAAGCCCGGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLEDNLEALGVSEPVPDCSDTK*RKPGKA Trigger: GGCCTTCCCGGGCTTGCGCCACTTGGTGTCGCTGCA...ATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
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| CDS-3UTR CCA 90 bp | CCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGAGGGGTGGCACAGGTaGCACCCACCCGCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLEDNLEALGVSEPVPDEGWHR*HPPAGS Trigger: TGAACCTGCGGGTGGGTGCCACCTGTGCCACCCCTC...ATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR CCA 90 bp | AACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGGAGGGGTGGCACAGGTaGCACCCACCCGCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NPYWRTTLRLWGSRNQFLEGWHR*HPPAGS Trigger: TGAACCTGCGGGTGGGTGCCACCTGTGCCACCCCTC...CAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTTCTGGCCACGGACACTaGGAGGGGTGGCACAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEDNLEALGVSEPVPDDSSGHGH*EGWHRW Trigger: CCACCTGTGCCACCCCTCCCAGTGTCCGTGGCCAGA...ACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| 3UTR CAA 72 bp | CCGACCTTTGCATGCCCAGAGCCTCAGCCCAGGTTCTaGCTCCTACCTGCCACCATTGCTGAGCCTAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PTFACPEPQPRF*LLPATIAEPKD Trigger: GTCCTTAGGCTCAGCAATGGTGGCAGGTAGGAGCAAGAACCTGGGCTGAGGCTCTGGGCATGCAAAGGTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| CDS-3UTR TCA 90 bp | AAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGCAGGTTCAGCCCAGTaGGCCACCTGTGCAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPLLEDNLEALGVSEPVPAGSAQ*ATCAAG Trigger: TCCCGCTGCACAGGTGGCTCACTGGGCTGAACCTGC...AGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR GCA 90 bp | GGCTCCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCGAGGGGAAGTGGTTaGGCCTCAGGTCCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSKKPLLEDNLEALGVSEPRGSG*ASGPGA Trigger: AGCTCCTGGACCTGAGGCGCAACCACTTCCCCTCGG...TTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR GCA 90 bp | AAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTTTCAGGAAGAGCTGCTaGAGCGACCGCCCCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPLLEDNLEALGVSEPVPFRKSC*SDRPTG Trigger: GCCCGTGGGGCGGTCGCTGCAGCAGCTCTTCCTGAA...AGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR CCA 90 bp | AAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTTGCAGCGACACCAAGTaGCGCAAGCCCGGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPLLEDNLEALGVSEPVPCSDTK*RKPGKA Trigger: GGCCTTCCCGGGCTTGCGCCACTTGGTGTCGCTGCA...AGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR CCA 90 bp | AAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTTCTGGCCACGGACACTaGGAGGGGTGGCACAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPLLEDNLEALGVSEPVPSGHGH*EGWHRW Trigger: CCACCTGTGCCACCCCTCCCAGTGTCCGTGGCCAGA...AGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR CCA 90 bp | CACGGATGGCTCCGATTGGTTCTGCTACCACGCCTCCTCCCATGCCATCTTCCCACTGCCTCTGGAGGTTaGTGTCCTCTTGGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HGWLRLVLLPRLLPCHLPTASGG*CPLGLP Trigger: AGGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGT...GGGAAGATGGCATGGGAGGAGGCGTGGTAGCAGAACCAATCGGAGCCATCCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| CDS-3UTR TCA 90 bp | AACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGGCCACCATCTCCACCTaGCAGTTCCGCAGGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NPYWRTTLRLWGSRNQFLATIST*QFRRSR Trigger: TCTGGACCTGCGGAACTGTCAGGTGGAGATGGTGGC...CAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS-3UTR GCA 90 bp | AAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTTGCAGCTCGTTGTGGTaGAGGCTGAGACGGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPLLEDNLEALGVSEPVPCSSLW*RLRRRS Trigger: GCTGCGCCGTCTCAGCCTGCACCACAACGAGCTGCA...AGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR GCA 90 bp | AAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCGCAGTGCTGCAGGTaGAGCGACACCAAGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KKPLLEDNLEALGVSEPVPQCCR*SDTKWR Trigger: GCGCCACTTGGTGTCGCTGCACCTGCAGCACTGCGG...AACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
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| CDS-3UTR GCA 90 bp | CTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTCGGTTTCTGTCGAGGTaGAGCTTCTCCAGCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LEDNLEALGVSEPVPDDSRFLSR*SFSSSR Trigger: GCGGGAGCTGGAGAAGCTGCACCTCGACAGAAACCG...ACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR GCA 90 bp | AACCAAGATGTAACACAGATGGTATTGCCACTGGCCCAGAACCAGAGAGCCTGGTTCAGGAAGAGCTGCTaGAGCGACCGCCCCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NQDVTQMVLPLAQNQRAWFRKSC*SDRPTG Trigger: GCCCGTGGGGCGGTCGCTGCAGCAGCTCTTCCTGAA...CCAGGCTCTCTGGTTCTGGGCCAGTGGCAATACCATCTGTGTTACATCTTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| CDS-3UTR GCA 90 bp | AACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGCTATTCAGGAAGAGCTaGTGCAGCGACCGCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: NPYWRTTLRLWGSRNQFLLFRKS*CSDRPT Trigger: CGTGGGGCGGTCGCTGCAGCAGCTCTTCCTGAATAG...CAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR GCA 90 bp | TGCATCGTTCCGTTAAGGTCCGCGCTGTCTACACAGAAGGTGGCTGGTTCGAGGGAGTTCTCCTGGCACTaGCTCTGGAGGTTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CIVPLRSALSTQKVAGSREFSWH*LWRLVS Trigger: GGACACCAACCTCCAGAGGCAGTGCCAGGAGAACTC...CCTCGAACCAGCCACCTTCTGTGTAGACAGCGCGGACCTTAACGGAACGATGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| CDS-3UTR CCA 90 bp | AAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTTCCAGATGCGTGAGGTaGGGCAGGTCCTGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPLLEDNLEALGVSEPVPSRCVR*GRSWKA Trigger: GGCCTTCCAGGACCTGCCCCACCTCACGCATCTGGA...AGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | CCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGCCTGGCAGTCCAGCCTaGGCAGGCTTCAAAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PYWRTTLRLWGSRNQFLMPGSPA*AGFKDR Trigger: CCTGTCTTTGAAGCCTGCCCAGGCTGGACTGCCAGG...CATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS-3UTR CCA 90 bp | TGCATCGTTCCGTTAAGGTCCGCGCTGTCTACACAGAAGGTGGCTGGTTCGAGGAGGTTGGTGTCCTCTTaGCCTTCCTGGCAGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CIVPLRSALSTQKVAGSRRLVSS*PSWQSS Trigger: GCTGGACTGCCAGGAAGGCCAAGAGGACACCAACCT...CCTCGAACCAGCCACCTTCTGTGTAGACAGCGCGGACCTTAACGGAACGATGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 72 bp | AAGTTCTGGCACCACCACACCCAGTGGGACTGTCCTTaGCCCTCTGTTGCCATCCCGGGTCTGCAGTATGAG | + |
|
Preference number: 4 (lower is better) Translates to: KFWHHHTQWDCP*PSVAIPGLQYE Trigger: CTCATACTGCAGACCCGGGATGGCAACAGAGGGCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAGAACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| CDS-3UTR GCA 90 bp | GGCTCCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAATCGGTGAGGTTCTGGTaGCGGCAGGTAACATGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GSKKPLLEDNLEALGVSESVRFW*RQVTCR Trigger: ACGGCATGTTACCTGCCGGCACCAGAACCTCACCGA...TTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS-3UTR GCA 90 bp | TCTTTGTTTCTCTACCTTGTCTGTTCCTCAATGTCGGCTGAGGCTGGGAGTTCTTCCGCGACGCCGCAGTaGTGCAGGTGCAGCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: SLFLYLVCSSMSAEAGSSSATPQ*CRCSDT Trigger: GGTGTCGCTGCACCTGCAGCACTGCGGCGTCGCGGA...AGAACTCCCAGCCTCAGCCGACATTGAGGAACAGACAAGGTAGAGAAACAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
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| CDS-3UTR CCA 90 bp | AAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTTGGAGGTCCAGCCTCTaGGTCAGCTCAGGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPLLEDNLEALGVSEPVPWRSSL*VSSGMV Trigger: CACCATCCCTGAGCTGACCCAGAGGCTGGACCTCCA...AGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS-3UTR CCA 90 bp | AGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGACTCAGGTCCAGGAGCTaGGTGTCGTTGGGGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTTLRLWGSRNQFLMTVRLRSRS*VSLGKP Trigger: CGGCTTCCCCAACGACACCCAGCTCCTGGACCTGAG...TCTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
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| CDS-3UTR CCA 90 bp | GACTTGAAATGTAGAGGCAGATGGGTCTCTGTGTGTTTAAGGCCAGTGTGGTCTACAGGTAGCCCAGGTTaGGGGCCCCTTCGAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DLKCRGRWVSVCLRPVWSTGSPG*GPLRGR Trigger: CCGCCCTCGAAGGGGCCCCCAACCTGGGCTACCTGT...AGACCACACTGGCCTTAAACACACAGAGACCCATCTGCCTCTACATTTCAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| CDS-3UTR CCA 90 bp | GGCTTCTCTGTGGGACTGTCCCTTGCCTCTTTTGTAAGAGATTGTCCCACCGTCCCTGGCAGTCCAGCCTaGGCAGGCTTCAAAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSVGLSLASFVRDCPTVPGSPA*AGFKDR Trigger: CCTGTCTTTGAAGCCTGCCCAGGCTGGACTGCCAGG...GACGGTGGGACAATCTCTTACAAAAGAGGCAAGGGACAGTCCCACAGAGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| CDS-3UTR CCA 90 bp | CTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAGGTTGGTGTCCTCTTaGCCTTCCTGGCAGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEDNLEALGVSEPVPDDSRLVSS*PSWQSS Trigger: GCTGGACTGCCAGGAAGGCCAAGAGGACACCAACCT...ACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | CCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGTCCTGGCACTGCCTCTaGAGGTTGGTGTCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PYWRTTLRLWGSRNQFLMSWHCL*RLVSSW Trigger: CCAAGAGGACACCAACCTCCAGAGGCAGTGCCAGGA...CATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS-3UTR TCA 90 bp | GACTTGAAATGTAGAGGCAGATGGGTCTCTGTGTGTTTAAGGCCAGTGTGGTCTGCAGGTTCAGCCCAGTaGGCCACCTGTGCAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLKCRGRWVSVCLRPVWSAGSAQ*ATCAAG Trigger: TCCCGCTGCACAGGTGGCTCACTGGGCTGAACCTGC...AGACCACACTGGCCTTAAACACACAGAGACCCATCTGCCTCTACATTTCAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| CDS-3UTR GCA 90 bp | TGTCACGGCCTCCTAAGTTCTGGCACCACCACACCCAGTGGGACTGTCCTTTGCTCTGCTCCAGGTCACTaGTATTCAGGAAGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CHGLLSSGTTTPSGTVLCSAPGH*YSGRAA Trigger: AGCAGCTCTTCCTGAATAGCAGTGACCTGGAGCAGA...GCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAGAACTTAGGAGGCCGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| CDS-3UTR CCA 90 bp | GAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGAGCTACGTGCCAGGCTaGGCTCTGGAGCAACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: EDNLEALGVSEPVPDDSKSYVPG*ALEQHH Trigger: ATGGTGTTGCTCCAGAGCCCAGCCTGGCACGTAGCT...CTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS-3UTR CCA 90 bp | GAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGGGCCTGAGAAGGCCCTaGGAGAAATCTGCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EDNLEALGVSEPVPDDSKGLRRP*EKSAPG Trigger: ACCTGGAGCAGATTTCTCCCAGGGCCTTCTCAGGCC...CTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | GGCTTCTCTGTGGGACTGTCCCTTGCCTCTTTTGTAAGAGATTGTCCCACCGTCGGCCTGAGAAGGCCCTaGGAGAAATCTGCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFSVGLSLASFVRDCPTVGLRRP*EKSAPG Trigger: ACCTGGAGCAGATTTCTCCCAGGGCCTTCTCAGGCC...GACGGTGGGACAATCTCTTACAAAAGAGGCAAGGGACAGTCCCACAGAGAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| CDS-3UTR CCA 90 bp | GACTTGAAATGTAGAGGCAGATGGGTCTCTGTGTGTTTAAGGCCAGTGTGGTCTTCTGGCCACGGACACTaGGAGGGGTGGCACAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLKCRGRWVSVCLRPVWSSGHGH*EGWHRW Trigger: CCACCTGTGCCACCCCTCCCAGTGTCCGTGGCCAGA...AGACCACACTGGCCTTAAACACACAGAGACCCATCTGCCTCTACATTTCAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| CDS-3UTR CCA 90 bp | AGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGAGGCTGGGAGTTCTCCTaGCACTGCCTCTGGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTTLRLWGSRNQFLMTVRGWEFS*HCLWRL Trigger: CAACCTCCAGAGGCAGTGCCAGGAGAACTCCCAGCC...TCTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| 3UTR CAA 72 bp | ACCACCACACCCAGTGGGACTGTCCTTTGCCCTCTGTaGCCATCCCGGGTCTGCAGTATGAGAAGATTATCC | + |
|
Preference number: 4 (lower is better) Translates to: TTTPSGTVLCPL*PSRVCSMRRLS Trigger: GGATAATCTTCTCATACTGCAGACCCGGGATGGCAACAGAGGGCAAAGGACAGTCCCACTGGGTGTGGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CAA 72 bp | AGACTGAAGCAAGGTCCCATTGTAGCCTGGTTTGGCTaGTCACGGCCTCCTAAGTTCTGGCACCACCACACC | + |
|
Preference number: 4 (lower is better) Translates to: RLKQGPIVAWFG*SRPPKFWHHHT Trigger: GGTGTGGTGGTGCCAGAACTTAGGAGGCCGTGACAAGCCAAACCAGGCTACAATGGGACCTTGCTTCAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| 3UTR CAA 72 bp | GCCTGTGGGCACTTTCCCCTTGGCCATACTCCTTCATaGGCTTCTCTGTGGGACTGTCCCTTGCCTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ACGHFPLGHTPS*ASLWDCPLPLL Trigger: CAAAAGAGGCAAGGGACAGTCCCACAGAGAAGCCAATGAAGGAGTATGGCCAAGGGGAAAGTGCCCACAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| CDS-3UTR GCA 90 bp | AGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGAGAGTTCTCCTGGCACTaGCTCTGGAGGTTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTTLRLWGSRNQFLMTVREFSWH*LWRLVS Trigger: GGACACCAACCTCCAGAGGCAGTGCCAGGAGAACTC...TCTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | GAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGCTCAGGGATGGTGTTTaGCACCTCGGTGAGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDNLEALGVSEPVPDDSKLRDGV*HLGEVL Trigger: CAGAACCTCACCGAGGTGCCAAACACCATCCCTGAG...CTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CCA 90 bp | AGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCACTGCCTCTGGAGGTTaGTGTCCTCTTGGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RNPYWRTTLRLWGSRNQFTASGG*CPLGLP Trigger: AGGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGT...GAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS-3UTR GCA 90 bp | GACTTGAAATGTAGAGGCAGATGGGTCTCTGTGTGTTTAAGGCCAGTGTGGTCTCGGTTTCTGTCGAGGTaGAGCTTCTCCAGCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: DLKCRGRWVSVCLRPVWSRFLSR*SFSSSR Trigger: GCGGGAGCTGGAGAAGCTGCACCTCGACAGAAACCG...AGACCACACTGGCCTTAAACACACAGAGACCCATCTGCCTCTACATTTCAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| CDS-3UTR GCA 90 bp | CTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTTCTGCTCCAGGTCACTaGTATTCAGGAAGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LEDNLEALGVSEPVPDDSSAPGH*YSGRAA Trigger: AGCAGCTCTTCCTGAATAGCAGTGACCTGGAGCAGA...ACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS-3UTR GCA 90 bp | CGATCTGTTTGGATCCATGTCTCATGTCCAATCATAGCCACCTTGTTGGATTTGCCAGTGAGCCACCTGTaGAGCGGGAGCAGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSVWIHVSCPIIATLLDLPVSHL*SGSSWQ Trigger: CTGCCAGCTGCTCCCGCTGCACAGGTGGCTCACTGG...CAAATCCAACAAGGTGGCTATGATTGGACATGAGACATGGATCCAAACAGATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| CDS-3UTR GCA 90 bp | TCCAAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCACCTGCTCCAGGTCACTaGTATTCAGGAAGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SKKPLLEDNLEALGVSEPPAPGH*YSGRAA Trigger: AGCAGCTCTTCCTGAATAGCAGTGACCTGGAGCAGG...TGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
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| CDS-3UTR CCA 90 bp | GAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGTTCAGTATATTGCCCTaGAGGTCCAGCCTCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EDNLEALGVSEPVPDDSKFSILP*RSSLWV Trigger: GACCCAGAGGCTGGACCTCCAGGGCAATATACTGAA...CTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| 3UTR CAA 72 bp | CAGGGGCAGGCTGCTCCACTCTCAGATGTGGTCTCTTaGTTTCTCTACCTTGTCTGTTCCTCAATGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGQAAPLSDVVS*FLYLVCSSMSA Trigger: AGCCGACATTGAGGAACAGACAAGGTAGAGAAACAAAGAGACCACATCTGAGAGTGGAGCAGCCTGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
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| 3UTR CAA 72 bp | AAGTGGCCTGTCATTGCTACCCTGCAAGTGACAATGTaGAGGATCAGAGAGGCCAGTGACTCAGGTCACTCA | + |
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Preference number: 4 (lower is better) Translates to: KWPVIATLQVTM*RIREASDSGHS Trigger: TGAGTGACCTGAGTCACTGGCCTCTCTGATCCTCAACATTGTCACTTGCAGGGTAGCAATGACAGGCCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 72 bp | TATGAACAGCAAAACCAAGATGTAACACAGATGGTATaGCCACTGGCCCAGAACCAGAGAGCCTGGATCCCC | + |
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Preference number: 4 (lower is better) Translates to: YEQQNQDVTQMV*PLAQNQRAWIP Trigger: GGGGATCCAGGCTCTCTGGTTCTGGGCCAGTGGCAATACCATCTGTGTTACATCTTGGTTTTGCTGTTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 72 bp | CCTCAGTACTCTGCCAAACACCAAAACTGGGGTGTTTaGGCAGAAGGCAGAATTCAACGATCTGTTTGGATC | + |
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Preference number: 4 (lower is better) Translates to: PQYSAKHQNWGV*AEGRIQRSVWI Trigger: GATCCAAACAGATCGTTGAATTCTGCCTTCTGCCAAAACACCCCAGTTTTGGTGTTTGGCAGAGTACTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| CDS-3UTR CCA 90 bp | AATTCAACGATCTGTTTGGATCCATGTCTCATGTCCAATCATAGCCACCTTGTTAGCTGGCAGTCACAGTaGAAAGGATTACCGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSTICLDPCLMSNHSHLVSWQSQ*KGLPLR Trigger: CCTCAGCGGTAATCCTTTCCACTGTGACTGCCAGCT...AACAAGGTGGCTATGATTGGACATGAGACATGGATCCAAACAGATCGTTGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 72 bp | GGGTGTTTTGGCAGAAGGCAGAATTCAACGATCTGTTaGGATCCATGTCTCATGTCCAATCATAGCCACCTT | + |
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Preference number: 4 (lower is better) Translates to: GCFGRRQNSTIC*DPCLMSNHSHL Trigger: AAGGTGGCTATGATTGGACATGAGACATGGATCCAAACAGATCGTTGAATTCTGCCTTCTGCCAAAACACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 72 bp | GAGAAGATTATCCTTTACCTTCTCCTGAATCCACAATaGCATCGTTCCGTTAAGGTCCGCGCTGTCTACACA | + |
|
Preference number: 4 (lower is better) Translates to: EKIILYLLLNPQ*HRSVKVRAVYT Trigger: TGTGTAGACAGCGCGGACCTTAACGGAACGATGCAATTGTGGATTCAGGAGAAGGTAAAGGATAATCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 72 bp | TGGATCCATGTCTCATGTCCAATCATAGCCACCTTGTaGGATTTGCAGTTAATGACACATGCCATCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: WIHVSCPIIATL*DLQLMTHAIHF Trigger: GAAATGGATGGCATGTGTCATTAACTGCAAATCCAACAAGGTGGCTATGATTGGACATGAGACATGGATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 72 bp | GTTTGGATCCATGTCTCATGTCCAATCATAGCCACCTaGTTGGATTTGCAGTTAATGACACATGCCATCCAT | + |
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Preference number: 4 (lower is better) Translates to: VWIHVSCPIIAT*LDLQLMTHAIH Trigger: ATGGATGGCATGTGTCATTAACTGCAAATCCAACAAGGTGGCTATGATTGGACATGAGACATGGATCCAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| 3UTR CAA 72 bp | CATGTCTCATGTCCAATCATAGCCACCTTGTTGGATTaGCAGTTAATGACACATGCCATCCATTTCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HVSCPIIATLLD*QLMTHAIHFFV Trigger: TACAAAGAAATGGATGGCATGTGTCATTAACTGCAAATCCAACAAGGTGGCTATGATTGGACATGAGACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| CDS GCA 90 bp | CACGCGCAGGCTGGAGGGCAGGGCGTGGCCCACGCGGCCTCTCCGTaGGGGGAGCGAAGAGGAGGAGCGCGGGGACCGGCCGGCCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: HAQAGGQGVAHAASP*GERRGGARGPAGRS Trigger: GGACCGGCCGGCCGGTCCCCGCGCTCCTCCTCTTCGCTCCCCGCACGGAGAGGCCGCGTGGGCCACGCCCTGCCCTCCAGCCTGCGCGTG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 90 bp | AAGCCGCGGGGCACGGCCTGCAGGCCGCGGCCGTCGCAAGTGCTGTaGCGGGTCTCGGCGACGCACGCGCAGGCTGGAGGGCAGGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: KPRGTACRPRPSQVL*RVSATHAQAGGQGV Trigger: CACGCCCTGCCCTCCAGCCTGCGCGTGCGTCGCCGAGACCCGGCACAGCACTTGCGACGGCCGCGGCCTGCAGGCCGTGCCCCGCGGCTT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 90 bp | TGGGGAAGCCGCGGGGCACGGCCTGCAGGCCGCGGCCGTCGCAAGTaGTGTGCCGGGTCTCGGCGACGCACGCGCAGGCTGGAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGSRGARPAGRGRRK*CAGSRRRTRRLEGR Trigger: CCTGCCCTCCAGCCTGCGCGTGCGTCGCCGAGACCCGGCACAGCACTTGCGACGGCCGCGGCCTGCAGGCCGTGCCCCGCGGCTTCCCCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 90 bp | GAGCGCACCCGAGCGCGCACCAGCCACTCGAGCAGGGGCCGTGCGTaGCAGGCGCACCACAGCGGGTTGCCCTGCAGCCGCAGGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ERTRARTSHSSRGRA*QAHHSGLPCSRRRR Trigger: GCGCCGCCTGCGGCTGCAGGGCAACCCGCTGTGGTGCGCCTGCCACGCACGGCCCCTGCTCGAGTGGCTGGTGCGCGCTCGGGTGCGCTC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 90 bp | GCCACTCGAGCAGGGGCCGTGCGTGGCAGGCGCACCACAGCGGGTTaGCCTGCAGCCGCAGGCGGCGCAGCTGGCCGGGGACCTGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ATRAGAVRGRRTTAG*PAAAGGAAGRGPVA Trigger: CGCTACAGGTCCCCGGCCAGCTGCGCCGCCTGCGGCTGCAGGGCAACCCGCTGTGGTGCGCCTGCCACGCACGGCCCCTGCTCGAGTGGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 90 bp | GCCAAGGCGCCGGGCTCCAGCTCCGCGACGCCGCAGTGCTGCAGGTaGAGCGACACCAAGTGGCGCAAGCCCGGGAAGGCCGCGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AKAPGSSSATPQCCR*SDTKWRKPGKAARG Trigger: GCCCCGCGCGGCCTTCCCGGGCTTGCGCCACTTGGTGTCGCTGCACCTGCAGCACTGCGGCGTCGCGGAGCTGGAGCCCGGCGCCTTGGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
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| CDS CCA 90 bp | CGGCGCAGCTGGCCGGGGACCTGTAGCGGGGGCAGGGTGGTGAGCTaGTTCCCGCGGAGGTCGAGGGTGTGCAGGCGCGGGCAGTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: RRSWPGTCSGGRVVS*FPRRSRVCRRGQWA Trigger: CGCCCACTGCCCGCGCCTGCACACCCTCGACCTCCGCGGGAACCAGCTCACCACCCTGCCCCCGCTACAGGTCCCCGGCCAGCTGCGCCG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS TCA 90 bp | GGCGCAGCGCCGGCAGGCCGGCCAGAGCCTCGGGGGCCAGGACGCTaGGCGCATTGTGAGACAGCTGCAGCCAGCGGGTGCGCAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GAAPAGRPEPRGPGR*AHCETAAASGCAAA Trigger: GGCTGCTGCGCACCCGCTGGCTGCAGCTGTCTCACAATGCGCTCAGCGTCCTGGCCCCCGAGGCTCTGGCCGGCCTGCCGGCGCTGCGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS TCA 90 bp | CCCGCAGGCCGGGCAGCGCCAGGCCGTCCTCCTCTCCCGTGTAGGTaGGCGGGTTGTGACCCAGCTCCAGCCGCGCCAGGCTGCGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: PAGRAAPGRPPLPCR*AGCDPAPAAPGCGP Trigger: AGGCCCGCAGCCTGGCGCGGCTGGAGCTGGGTCACAACCCGCTCACCTACACGGGAGAGGAGGACGGCCTGGCGCTGCCCGGCCTGCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 90 bp | ATCCGAGCGCACCCGAGCGCGCACCAGCCACTCGAGCAGGGGCCGTaGGTGGCAGGCGCACCACAGCGGGTTGCCCTGCAGCCGCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: IRAHPSAHQPLEQGP*VAGAPQRVALQPQA Trigger: CGCCTGCGGCTGCAGGGCAACCCGCTGTGGTGCGCCTGCCACGCACGGCCCCTGCTCGAGTGGCTGGTGCGCGCTCGGGTGCGCTCGGAT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 90 bp | CAGGCGCACCACAGCGGGTTGCCCTGCAGCCGCAGGCGGCGCAGCTaGCCGGGGACCTGTAGCGGGGGCAGGGTGGTGAGCTGGTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: QAHHSGLPCSRRRRS*PGTCSGGRVVSWFP Trigger: CGGGAACCAGCTCACCACCCTGCCCCCGCTACAGGTCCCCGGCCAGCTGCGCCGCCTGCGGCTGCAGGGCAACCCGCTGTGGTGCGCCTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 90 bp | AGGTCCAGGAGCTGGGTGTCGTTGGGGAAGCCGCGGGGCACGGCCTaGAGGCCGCGGCCGTCGCAAGTGCTGTGCCGGGTCTCGGCGACG | + |
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Preference number: 5 (lower is better) Translates to: RSRSWVSLGKPRGTA*RPRPSQVLCRVSAT Trigger: CGTCGCCGAGACCCGGCACAGCACTTGCGACGGCCGCGGCCTGCAGGCCGTGCCCCGCGGCTTCCCCAACGACACCCAGCTCCTGGACCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS TCA 90 bp | GGCAGGCCGGCCAGAGCCTCGGGGGCCAGGACGCTGAGCGCATTGTaGGACAGCTGCAGCCAGCGGGTGCGCAGCAGCCCCTGGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GRPARASGARTLSAL*DSCSQRVRSSPWKA Trigger: GGCCTTCCAGGGGCTGCTGCGCACCCGCTGGCTGCAGCTGTCTCACAATGCGCTCAGCGTCCTGGCCCCCGAGGCTCTGGCCGGCCTGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 90 bp | TCCAGCTCCGCGACGCCGCAGTGCTGCAGGTGCAGCGACACCAAGTaGCGCAAGCCCGGGAAGGCCGCGCGGGGCACCGAGGGGAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: SSSATPQCCRCSDTK*RKPGKAARGTEGKW Trigger: CCACTTCCCCTCGGTGCCCCGCGCGGCCTTCCCGGGCTTGCGCCACTTGGTGTCGCTGCACCTGCAGCACTGCGGCGTCGCGGAGCTGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
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| CDS TCA 90 bp | CCAGCGCCTCCTGGGGCAGGGTGCTCAGGCGGTTGGAAGCCAGGTTaGGGAGGAGCAGGCGACCCAGGCCACGGAAGGCACCCTCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: PAPPGAGCSGGWKPG*GGAGDPGHGRHPRP Trigger: TGGCCGAGGGTGCCTTCCGTGGCCTGGGTCGCCTGCTCCTCCTCAACCTGGCTTCCAACCGCCTGAGCACCCTGCCCCAGGAGGCGCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 90 bp | GCTCCTGCCAGATCCCCGGGCGCCAGGCGGTCCACCGCGTTGTCCTaGAGGTGTAGCGAGACAAGGGTGGGTAGGGCCCGCAGAGCGGTC | + |
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Preference number: 5 (lower is better) Translates to: APARSPGARRSTALS*RCSETRVGRARRAV Trigger: GACCGCTCTGCGGGCCCTACCCACCCTTGTCTCGCTACACCTCCAGGACAACGCGGTGGACCGCCTGGCGCCCGGGGATCTGGCAGGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS TCA 90 bp | GGAAGGCCATGGCGGGCAGGTAGACCAGGGCGTTGTGGGCCAAGTTaGGAGTGGTCAGCGAGCCCAGGGCGCCGAAGGTCCCCGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRPWRAGRPGRCGPS*EWSASPGRRRSPGA Trigger: TGCGCCCGGGGACCTTCGGCGCCCTGGGCTCGCTGACCACTCTCAACTTGGCCCACAACGCCCTGGTCTACCTGCCCGCCATGGCCTTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 90 bp | GGATCCTCAGGAAGCGGTTGTGCTCCAGGTACAGGTAGCCCAGGTTaGGGGCCCCTTCGAGGGCGGCGGCGCTCAGGCCCGAGAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSSGSGCAPGTGSPG*GPLRGRRRSGPRAG Trigger: ACCAGCTCTCGGGCCTGAGCGCCGCCGCCCTCGAAGGGGCCCCCAACCTGGGCTACCTGTACCTGGAGCACAACCGCTTCCTGAGGATCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS CCA 90 bp | CCAGGCGGTCCACCGCGTTGTCCTGGAGGTGTAGCGAGACAAGGGTaGGTAGGGCCCGCAGAGCGGTCCCCGGGATCCTCAGGAAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGGPPRCPGGVARQG*VGPAERSPGSSGSG Trigger: ACCGCTTCCTGAGGATCCCGGGGACCGCTCTGCGGGCCCTACCCACCCTTGTCTCGCTACACCTCCAGGACAACGCGGTGGACCGCCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS CCA 90 bp | GAAGAGCTGCTGCAGCGACCGCCCCACGGGCTGAAAGGCGCCGTCTaGAAGAGCCCGGAGCGGGTTCCCCGAGAGCTGCAGCTCCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: EELLQRPPHGLKGAV*KSPERVPRELQLLE Trigger: CTCAAGGAGCTGCAGCTCTCGGGGAACCCGCTCCGGGCTCTTCCAGACGGCGCCTTTCAGCCCGTGGGGCGGTCGCTGCAGCAGCTCTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS GCA 90 bp | GATGTGATTGCCACTCAGGTAAAGGCAGCGCAAAGCCCGCGCTCCTaGCAGATCCCCGGGCGCCAGGCGGTCCACCGCGTTGTCCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: DVIATQVKAAQSPRS*QIPGRQAVHRVVLE Trigger: CTCCAGGACAACGCGGTGGACCGCCTGGCGCCCGGGGATCTGGCAGGAGCGCGGGCTTTGCGCTGCCTTTACCTGAGTGGCAATCACATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS TCA 90 bp | TCTCCAGCTCCCGCGCTGGACCGAGCGCCCCGGGTGAAACCTGGGTaGTGTGATTGCCACTCAGGTAAAGGCAGCGCAAAGCCCGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: SPAPALDRAPRVKPG*CDCHSGKGSAKPAL Trigger: GAGCGCGGGCTTTGCGCTGCCTTTACCTGAGTGGCAATCACATCACCCAGGTTTCACCCGGGGCGCTCGGTCCAGCGCGGGAGCTGGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS CCA 90 bp | CAGCCTGGGCAGGCTTCAAAGACAGGAGCTGCAACCTTCACCTTCTaGCCACGGACACTGGGAGGGGTGGCACAGGTGGCACCCACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QPGQASKTGAATFTF*PRTLGGVAQVAPTR Trigger: GCGGGTGGGTGCCACCTGTGCCACCCCTCCCAGTGTCCGTGGCCAGAAGGTGAAGGTTGCAGCTCCTGTCTTTGAAGCCTGCCCAGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 |
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| CDS-3UTR CAA 90 bp | GGTGGGCTGGGTAGGGTCAGCGGTCAGGGGCAGGCTGCTCCACTCTCAGATGTGAGGGTGCTCAGGCGGTaGGAAGCCAGGTTGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGLGRVSGQGQAAPLSDVRVLRR*EARLRR Trigger: CCTCCTCAACCTGGCTTCCAACCGCCTGAGCACCCT...CACATCTGAGAGTGGAGCAGCCTGCCCCTGACCGCTGACCCTACCCAGCCCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS-3UTR CAA 90 bp | TCTCCTGGCACTGCCTCTGGAGGTTGGTGTCCTCTTGGCCTTCCTGGCAGTCCAAGGAGCTGGGTGTCGTaGGGGAAGCCGCGGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SPGTASGGWCPLGLPGSPRSWVS*GKPRGT Trigger: CGTGCCCCGCGGCTTCCCCAACGACACCCAGCTCCT...TGGACTGCCAGGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGTGCCAGGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
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| CDS CCA 90 bp | AGCCCAGTGAGCCACCTGTGCAGCGGGAGCAGCTGGCAGTCACAGTaGAAAGGATTACCGCTGAGGTCGACCAGCTCCAGCCCGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPVSHLCSGSSWQSQ*KGLPLRSTSSSPLS Trigger: GCTCAGCGGGCTGGAGCTGGTCGACCTCAGCGGTAATCCTTTCCACTGTGACTGCCAGCTGCTCCCGCTGCACAGGTGGCTCACTGGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 |
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| CDS-3UTR CAA 90 bp | CCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGGCGCACCACAGCGGGTaGCCCTGCAGCCGCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PYWRTTLRLWGSRNQFLMAHHSG*PCSRRR Trigger: CCGCCTGCGGCTGCAGGGCAACCCGCTGTGGTGCGC...CATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS TCA 90 bp | GAGGTGCAGCTTCTCCAGCTCCCGCGCTGGACCGAGCGCCCCGGGTaGAACCTGGGTGATGTGATTGCCACTCAGGTAAAGGCAGCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EVQLLQLPRWTERPG*NLGDVIATQVKAAQ Trigger: TTGCGCTGCCTTTACCTGAGTGGCAATCACATCACCCAGGTTTCACCCGGGGCGCTCGGTCCAGCGCGGGAGCTGGAGAAGCTGCACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS CCA 90 bp | ATGTCGGCTGAGGCTGGGAGTTCTCCTGGCACTGCCTCTGGAGGTTaGTGTCCTCTTGGCCTTCCTGGCAGTCCAGCCTGGGCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MSAEAGSSPGTASGG*CPLGLPGSPAWAGF Trigger: GAAGCCTGCCCAGGCTGGACTGCCAGGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGTGCCAGGAGAACTCCCAGCCTCAGCCGACAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 |
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| CDS CCA 90 bp | GGCTGGGAGTTCTCCTGGCACTGCCTCTGGAGGTTGGTGTCCTCTTaGCCTTCCTGGCAGTCCAGCCTGGGCAGGCTTCAAAGACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GWEFSWHCLWRLVSS*PSWQSSLGRLQRQE Trigger: CTCCTGTCTTTGAAGCCTGCCCAGGCTGGACTGCCAGGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGTGCCAGGAGAACTCCCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 |
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| CDS-3UTR CAA 90 bp | AACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGAGGAGCTGGGTGTCGTaGGGGAAGCCGCGGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: NPYWRTTLRLWGSRNQFLRSWVS*GKPRGT Trigger: CGTGCCCCGCGGCTTCCCCAACGACACCCAGCTCCT...CAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS TCA 90 bp | TGGCACCTCGGTGAGGTTCTGGTGCCGGCAGGTAACATGCCGTCTTaGGTTGTCGCAGACACAGGTCTGTGGGCATCGCTGGGCAGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: WHLGEVLVPAGNMPS*VVADTGLWASLGSY Trigger: GTAGCTGCCCAGCGATGCCCACAGACCTGTGTCTGCGACAACTCAAGACGGCATGTTACCTGCCGGCACCAGAACCTCACCGAGGTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 90 bp | TTCTCCTGGCACTGCCTCTGGAGGTTGGTGTCCTCTTGGCCTTCCTaGCAGTCCAGCCTGGGCAGGCTTCAAAGACAGGAGCTGCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: FSWHCLWRLVSSWPS*QSSLGRLQRQELQP Trigger: AGGTTGCAGCTCCTGTCTTTGAAGCCTGCCCAGGCTGGACTGCCAGGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGTGCCAGGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATAGGGCCTGCAGCTCGTaGTGGTGCAGGCTGAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLEDNLEALGVSEPVPDRACSS*WCRLRR Trigger: CCGTCTCAGCCTGCACCACAACGAGCTGCAGGCCCT...ATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS-3UTR CAA 90 bp | CCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATACCGAGGGGAAGTGGTaGCGCCTCAGGTCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLLEDNLEALGVSEPVPDTEGKW*RLRSRS Trigger: GCTCCTGGACCTGAGGCGCAACCACTTCCCCTCGGT...ATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTACCGAGGGGAAGTGGTaGCGCCTCAGGTCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LEDNLEALGVSEPVPDDSTEGKW*RLRSRS Trigger: GCTCCTGGACCTGAGGCGCAACCACTTCCCCTCGGT...ACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
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| CDS-3UTR CAA 90 bp | TGTCACGGCCTCCTAAGTTCTGGCACCACCACACCCAGTGGGACTGTCCTTTGCCACTGCCTCTGGAGGTaGGTGTCCTCTTGGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CHGLLSSGTTTPSGTVLCHCLWR*VSSWPS Trigger: GGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGTG...GCAAAGGACAGTCCCACTGGGTGTGGTGGTGCCAGAACTTAGGAGGCCGTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
||
| CDS GCA 90 bp | ATGGTGTTTGGCACCTCGGTGAGGTTCTGGTGCCGGCAGGTAACATaGCGTCTTGAGTTGTCGCAGACACAGGTCTGTGGGCATCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MVFGTSVRFWCRQVT*RLELSQTQVCGHRW Trigger: CCAGCGATGCCCACAGACCTGTGTCTGCGACAACTCAAGACGGCATGTTACCTGCCGGCACCAGAACCTCACCGAGGTGCCAAACACCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 90 bp | TGGGTCAGCTCAGGGATGGTGTTTGGCACCTCGGTGAGGTTCTGGTaGCGGCAGGTAACATGCCGTCTTGAGTTGTCGCAGACACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WVSSGMVFGTSVRFW*RQVTCRLELSQTQV Trigger: GACCTGTGTCTGCGACAACTCAAGACGGCATGTTACCTGCCGGCACCAGAACCTCACCGAGGTGCCAAACACCATCCCTGAGCTGACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 90 bp | GCAGACACAGGTCTGTGGGCATCGCTGGGCAGCTACGTGCCAGGCTaGGCTCTGGAGCAACACCATGAACAGCAACAGCATAAAGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: ADTGLWASLGSYVPG*ALEQHHEQQQHKDP Trigger: TGGGTCTTTATGCTGTTGCTGTTCATGGTGTTGCTCCAGAGCCCAGCCTGGCACGTAGCTGCCCAGCGATGCCCACAGACCTGTGTCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS CCA 90 bp | CTCTGGGTCAGCTCAGGGATGGTGTTTGGCACCTCGGTGAGGTTCTaGTGCCGGCAGGTAACATGCCGTCTTGAGTTGTCGCAGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: LWVSSGMVFGTSVRF*CRQVTCRLELSQTQ Trigger: CTGTGTCTGCGACAACTCAAGACGGCATGTTACCTGCCGGCACCAGAACCTCACCGAGGTGCCAAACACCATCCCTGAGCTGACCCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGCGGTTGGAAGCCAGGTaGAGGAGGAGCAGGCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: EDNLEALGVSEPVPDDSKRLEAR*RRSRRP Trigger: GGGTCGCCTGCTCCTCCTCAACCTGGCTTCCAACCG...CTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CAA 90 bp | TTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTGATGACAGTAAGAGCCGGTGGGAGGACCTTCAGTATATaGCCCTGGAGGTCCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRLWGSRNQFLMTVRAGGRTFSI*PWRSSL Trigger: GAGGCTGGACCTCCAGGGCAATATACTGAAGGTCCT...CCCACCGGCTCTTACTGTCATCAGGAACTGGTTCCGAGACCCCCAAAGCCTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CAA 90 bp | AAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTGCGTTGTGGGCCAAGTaGAGAGTGGTCAGCGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KKPLLEDNLEALGVSEPVALWAK*RVVSEP Trigger: GGGCTCGCTGACCACTCTCAACTTGGCCCACAACGC...AACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CAA 90 bp | GGCTTCTCTGTGGGACTGTCCCTTGCCTCTTTTGTAAGAGATTGTCCCACCGTCGAGGTTGGTGTCCTCTaGGCCTTCCTGGCAGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GFSVGLSLASFVRDCPTVEVGVL*AFLAVQ Trigger: CTGGACTGCCAGGAAGGCCAAGAGGACACCAACCTC...GACGGTGGGACAATCTCTTACAAAAGAGGCAAGGGACAGTCCCACAGAGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173598.8 |
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| CDS-3UTR CAA 90 bp | AAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTCCTCACTGCCTCTGGAGGTaGGTGTCCTCTTGGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPLLEDNLEALGVSEPVPHCLWR*VSSWPS Trigger: GGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGTG...AGGAACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS-3UTR CAA 90 bp | AAGAAACCCTTACTGGAGGACAACCTTGAGGCTTTGGGGGTCTCGGAACCAGTTGAGGTTGGTGTCCTCTaGGCCTTCCTGGCAGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KKPLLEDNLEALGVSEPVEVGVL*AFLAVQ Trigger: CTGGACTGCCAGGAAGGCCAAGAGGACACCAACCTC...AACTGGTTCCGAGACCCCCAAAGCCTCAAGGTTGTCCTCCAGTAAGGGTTTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS TCA 90 bp | TTGATTCTTGTGCAGGTACAAGCTCCGCAGCCCTTTTCCCAGGCCTaGGAAGGCCCTGGGAGAAATCTGCTCCAGGTCACTGCTATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LILVQVQAPQPFSQA*EGPGRNLLQVTAIQ Trigger: CTGAATAGCAGTGACCTGGAGCAGATTTCTCCCAGGGCCTTCTCAGGCCTGGGAAAAGGGCTGCGGAGCTTGTACCTGCACAAGAATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 |
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| CDS GCA 72 bp | GCAGGGGCCGTGCGTGGCAGGCGCACCACAGCGGGTTaGCCTGCAGCCGCAGGCGGCGCAGCTGGCCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGAVRGRRTTAG*PAAAGGAAGRG Trigger: TCCCCGGCCAGCTGCGCCGCCTGCGGCTGCAGGGCAACCCGCTGTGGTGCGCCTGCCACGCACGGCCCCTGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 72 bp | CGCGGGGCACGGCCTGCAGGCCGCGGCCGTCGCAAGTaGTGTGCCGGGTCTCGGCGACGCACGCGCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGARPAGRGRRK*CAGSRRRTRRL Trigger: CAGCCTGCGCGTGCGTCGCCGAGACCCGGCACAGCACTTGCGACGGCCGCGGCCTGCAGGCCGTGCCCCGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS CAA 72 bp | AGCAGGGGCCGTGCGTGGCAGGCGCACCACAGCGGGTaGCCCTGCAGCCGCAGGCGGCGCAGCTGGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRGRAWQAHHSG*PCSRRRRSWPG Trigger: CCCCGGCCAGCTGCGCCGCCTGCGGCTGCAGGGCAACCCGCTGTGGTGCGCCTGCCACGCACGGCCCCTGCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS GCA 72 bp | GGCCGTGCGTGGCAGGCGCACCACAGCGGGTTGCCCTaGAGCCGCAGGCGGCGCAGCTGGCCGGGGACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GRAWQAHHSGLP*SRRRRSWPGTC Trigger: ACAGGTCCCCGGCCAGCTGCGCCGCCTGCGGCTGCAGGGCAACCCGCTGTGGTGCGCCTGCCACGCACGGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS GCA 72 bp | GGCACGGCCTGCAGGCCGCGGCCGTCGCAAGTGCTGTaGCGGGTCTCGGCGACGCACGCGCAGGCTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GTACRPRPSQVL*RVSATHAQAGG Trigger: CCCTCCAGCCTGCGCGTGCGTCGCCGAGACCCGGCACAGCACTTGCGACGGCCGCGGCCTGCAGGCCGTGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CAA 90 bp | AGCCACTCGAGCAGGGGCCGTGCGTGGCAGGCGCACCACAGCGGGTaGCCCTGCAGCCGCAGGCGGCGCAGCTGGCCGGGGACCTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SHSSRGRAWQAHHSG*PCSRRRRSWPGTCS Trigger: GCTACAGGTCCCCGGCCAGCTGCGCCGCCTGCGGCTGCAGGGCAACCCGCTGTGGTGCGCCTGCCACGCACGGCCCCTGCTCGAGTGGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 72 bp | CACAGCGGGTTGCCCTGCAGCCGCAGGCGGCGCAGCTaGCCGGGGACCTGTAGCGGGGGCAGGGTGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HSGLPCSRRRRS*PGTCSGGRVVS Trigger: GCTCACCACCCTGCCCCCGCTACAGGTCCCCGGCCAGCTGCGCCGCCTGCGGCTGCAGGGCAACCCGCTGTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 72 bp | CGAGCGCGCACCAGCCACTCGAGCAGGGGCCGTGCGTaGCAGGCGCACCACAGCGGGTTGCCCTGCAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RARTSHSSRGRA*QAHHSGLPCSR Trigger: GCGGCTGCAGGGCAACCCGCTGTGGTGCGCCTGCCACGCACGGCCCCTGCTCGAGTGGCTGGTGCGCGCTCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 72 bp | TCTCGGCGACGCACGCGCAGGCTGGAGGGCAGGGCGTaGCCCACGCGGCCTCTCCGTGCGGGGAGCGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SRRRTRRLEGRA*PTRPLRAGSEE Trigger: CTCTTCGCTCCCCGCACGGAGAGGCCGCGTGGGCCACGCCCTGCCCTCCAGCCTGCGCGTGCGTCGCCGAGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 72 bp | CACCCGAGCGCGCACCAGCCACTCGAGCAGGGGCCGTaGGTGGCAGGCGCACCACAGCGGGTTGCCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HPSAHQPLEQGP*VAGAPQRVALQ Trigger: CTGCAGGGCAACCCGCTGTGGTGCGCCTGCCACGCACGGCCCCTGCTCGAGTGGCTGGTGCGCGCTCGGGTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 72 bp | AGCTGGGTGTCGTTGGGGAAGCCGCGGGGCACGGCCTaGAGGCCGCGGCCGTCGCAAGTGCTGTGCCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SWVSLGKPRGTA*RPRPSQVLCRV Trigger: GACCCGGCACAGCACTTGCGACGGCCGCGGCCTGCAGGCCGTGCCCCGCGGCTTCCCCAACGACACCCAGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS TCA 72 bp | CCGGCAGGCCGGCCAGAGCCTCGGGGGCCAGGACGCTaGGCGCATTGTGAGACAGCTGCAGCCAGCGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PAGRPEPRGPGR*AHCETAAASGC Trigger: GCACCCGCTGGCTGCAGCTGTCTCACAATGCGCTCAGCGTCCTGGCCCCCGAGGCTCTGGCCGGCCTGCCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS TCA 72 bp | CGGGCAGCGCCAGGCCGTCCTCCTCTCCCGTGTAGGTaGGCGGGTTGTGACCCAGCTCCAGCCGCGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RAAPGRPPLPCR*AGCDPAPAAPG Trigger: GCCTGGCGCGGCTGGAGCTGGGTCACAACCCGCTCACCTACACGGGAGAGGAGGACGGCCTGGCGCTGCCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 72 bp | CCGGGCTCCAGCTCCGCGACGCCGCAGTGCTGCAGGTaGAGCGACACCAAGTGGCGCAAGCCCGGGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGSSSATPQCCR*SDTKWRKPGKA Trigger: GGCCTTCCCGGGCTTGCGCCACTTGGTGTCGCTGCACCTGCAGCACTGCGGCGTCGCGGAGCTGGAGCCCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173898.2 |
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| CDS CAA 90 bp | GCCCGCGCTCCTGCCAGATCCCCGGGCGCCAGGCGGTCCACCGCGTaGTCCTGGAGGTGTAGCGAGACAAGGGTGGGTAGGGCCCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ARAPARSPGARRSTA*SWRCSETRVGRARR Trigger: TCTGCGGGCCCTACCCACCCTTGTCTCGCTACACCTCCAGGACAACGCGGTGGACCGCCTGGCGCCCGGGGATCTGGCAGGAGCGCGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS TCA 72 bp | GCCAGAGCCTCGGGGGCCAGGACGCTGAGCGCATTGTaGGACAGCTGCAGCCAGCGGGTGCGCAGCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ARASGARTLSAL*DSCSQRVRSSP Trigger: GGGGCTGCTGCGCACCCGCTGGCTGCAGCTGTCTCACAATGCGCTCAGCGTCCTGGCCCCCGAGGCTCTGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 72 bp | GGAAGCGGTTGTGCTCCAGGTACAGGTAGCCCAGGTTaGGGGCCCCTTCGAGGGCGGCGGCGCTCAGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSGCAPGTGSPG*GPLRGRRRSGP Trigger: CGGGCCTGAGCGCCGCCGCCCTCGAAGGGGCCCCCAACCTGGGCTACCTGTACCTGGAGCACAACCGCTTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS CCA 72 bp | CTGCAGCGACCGCCCCACGGGCTGAAAGGCGCCGTCTaGAAGAGCCCGGAGCGGGTTCCCCGAGAGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LQRPPHGLKGAV*KSPERVPRELQ Trigger: CTGCAGCTCTCGGGGAACCCGCTCCGGGCTCTTCCAGACGGCGCCTTTCAGCCCGTGGGGCGGTCGCTGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS CAA 90 bp | CCGTCTGGAAGAGCCCGGAGCGGGTTCCCCGAGAGCTGCAGCTCCTaGAGCGCCGGCAGCCCCTCCAAGGCTCCAGTCGGCACCTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PSGRARSGFPESCSS*SAGSPSKAPVGTSR Trigger: GCGAGAGGTGCCGACTGGAGCCTTGGAGGGGCTGCCGGCGCTCAAGGAGCTGCAGCTCTCGGGGAACCCGCTCCGGGCTCTTCCAGACGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS GCA 72 bp | GCCACTCAGGTAAAGGCAGCGCAAAGCCCGCGCTCCTaGCAGATCCCCGGGCGCCAGGCGGTCCACCGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: ATQVKAAQSPRS*QIPGRQAVHRV Trigger: AACGCGGTGGACCGCCTGGCGCCCGGGGATCTGGCAGGAGCGCGGGCTTTGCGCTGCCTTTACCTGAGTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS GCA 72 bp | CCGTCTGGAAGAGCCCGGAGCGGGTTCCCCGAGAGCTaGAGCTCCTTGAGCGCCGGCAGCCCCTCCAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSGRARSGFPES*SSLSAGSPSKA Trigger: AGCCTTGGAGGGGCTGCCGGCGCTCAAGGAGCTGCAGCTCTCGGGGAACCCGCTCCGGGCTCTTCCAGACGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS CCA 72 bp | AGATCCCCGGGCGCCAGGCGGTCCACCGCGTTGTCCTaGAGGTGTAGCGAGACAAGGGTGGGTAGGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSPGARRSTALS*RCSETRVGRAR Trigger: GCGGGCCCTACCCACCCTTGTCTCGCTACACCTCCAGGACAACGCGGTGGACCGCCTGGCGCCCGGGGATCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
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| CDS TCA 72 bp | CCTGGGGCAGGGTGCTCAGGCGGTTGGAAGCCAGGTTaGGGAGGAGCAGGCGACCCAGGCCACGGAAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGAGCSGGWKPG*GGAGDPGHGRH Trigger: GTGCCTTCCGTGGCCTGGGTCGCCTGCTCCTCCTCAACCTGGCTTCCAACCGCCTGAGCACCCTGCCCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS TCA 72 bp | TGGCGGGCAGGTAGACCAGGGCGTTGTGGGCCAAGTTaGGAGTGGTCAGCGAGCCCAGGGCGCCGAAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WRAGRPGRCGPS*EWSASPGRRRS Trigger: GGACCTTCGGCGCCCTGGGCTCGCTGACCACTCTCAACTTGGCCCACAACGCCCTGGTCTACCTGCCCGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS CCA 72 bp | CAACCTTCACCTTCTGGCCACGGACACTGGGAGGGGTaGCACAGGTGGCACCCACCCGCAGGTTCAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QPSPSGHGHWEG*HRWHPPAGSAQ Trigger: CTGGGCTGAACCTGCGGGTGGGTGCCACCTGTGCCACCCCTCCCAGTGTCCGTGGCCAGAAGGTGAAGGTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
||
| CDS TCA 72 bp | CCCGCGCTGGACCGAGCGCCCCGGGTGAAACCTGGGTaGTGTGATTGCCACTCAGGTAAAGGCAGCGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PALDRAPRVKPG*CDCHSGKGSAK Trigger: CTTTGCGCTGCCTTTACCTGAGTGGCAATCACATCACCCAGGTTTCACCCGGGGCGCTCGGTCCAGCGCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
||
| CDS TCA 72 bp | CTTCTCCAGCTCCCGCGCTGGACCGAGCGCCCCGGGTaGAACCTGGGTGATGTGATTGCCACTCAGGTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLQLPRWTERPG*NLGDVIATQVK Trigger: CTTTACCTGAGTGGCAATCACATCACCCAGGTTTCACCCGGGGCGCTCGGTCCAGCGCGGGAGCTGGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 ENSMUST00000173898.2 |
||
| CDS GCA 72 bp | CAGGTTCAGCCCAGTGAGCCACCTGCTCCAGGTCACTaGTATTCAGGAAGAGCTGCTGCAGCGACCGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QVQPSEPPAPGH*YSGRAAAATAP Trigger: TGGGGCGGTCGCTGCAGCAGCTCTTCCTGAATAGCAGTGACCTGGAGCAGGTGGCTCACTGGGCTGAACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173898.2 |
||
| CDS CCA 72 bp | CTTGAGTTGTCGCAGACACAGGTCTGTGGGCATCGCTaGGCAGCTACGTGCCAGGCTGGGCTCTGGAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LELSQTQVCGHR*AATCQAGLWSN Trigger: GTTGCTCCAGAGCCCAGCCTGGCACGTAGCTGCCCAGCGATGCCCACAGACCTGTGTCTGCGACAACTCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
||
| CDS CCA 72 bp | GAGGTCCAGCCTCTGGGTCAGCTCAGGGATGGTGTTTaGCACCTCGGTGAGGTTCTGGTGCCGGCAGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: EVQPLGQLRDGV*HLGEVLVPAGN Trigger: GTTACCTGCCGGCACCAGAACCTCACCGAGGTGCCAAACACCATCCCTGAGCTGACCCAGAGGCTGGACCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CAA 90 bp | ACCTCGGTGAGGTTCTGGTGCCGGCAGGTAACATGCCGTCTTGAGTaGTCGCAGACACAGGTCTGTGGGCATCGCTGGGCAGCTACGTGC | + |
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Preference number: 6 (lower is better) Translates to: TSVRFWCRQVTCRLE*SQTQVCGHRWAATC Trigger: GCACGTAGCTGCCCAGCGATGCCCACAGACCTGTGTCTGCGACAACTCAAGACGGCATGTTACCTGCCGGCACCAGAACCTCACCGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CAA 90 bp | AGGCTGGGAGTTCTCCTGGCACTGCCTCTGGAGGTTGGTGTCCTCTaGGCCTTCCTGGCAGTCCAGCCTGGGCAGGCTTCAAAGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: RLGVLLALPLEVGVL*AFLAVQPGQASKTG Trigger: TCCTGTCTTTGAAGCCTGCCCAGGCTGGACTGCCAGGAAGGCCAAGAGGACACCAACCTCCAGAGGCAGTGCCAGGAGAACTCCCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 |
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| CDS CCA 72 bp | GGTCTGTGGGCATCGCTGGGCAGCTACGTGCCAGGCTaGGCTCTGGAGCAACACCATGAACAGCAACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: GLWASLGSYVPG*ALEQHHEQQQH Trigger: ATGCTGTTGCTGTTCATGGTGTTGCTCCAGAGCCCAGCCTGGCACGTAGCTGCCCAGCGATGCCCACAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 72 bp | CAGGCTTCAAAGACAGGAGCTGCAACCTTCACCTTCTaGCCACGGACACTGGGAGGGGTGGCACAGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: QASKTGAATFTF*PRTLGGVAQVA Trigger: TGCCACCTGTGCCACCCCTCCCAGTGTCCGTGGCCAGAAGGTGAAGGTTGCAGCTCCTGTCTTTGAAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 |
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| CDS TCA 72 bp | GGTGAGGTTCTGGTGCCGGCAGGTAACATGCCGTCTTaGGTTGTCGCAGACACAGGTCTGTGGGCATCGCTG | + |
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Preference number: 6 (lower is better) Translates to: GEVLVPAGNMPS*VVADTGLWASL Trigger: CAGCGATGCCCACAGACCTGTGTCTGCGACAACTCAAGACGGCATGTTACCTGCCGGCACCAGAACCTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 72 bp | CTGAGAAGGCCCTGGGAGAAATCTGCTCCAGGTCACTaGTATTCAGGAAGAGCTGCTGCAGCGACCGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LRRPWEKSAPGH*YSGRAAAATAP Trigger: TGGGGCGGTCGCTGCAGCAGCTCTTCCTGAATAGCAGTGACCTGGAGCAGATTTCTCCCAGGGCCTTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 |
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| CDS CCA 72 bp | GGGCATCGCTGGGCAGCTACGTGCCAGGCTGGGCTCTaGAGCAACACCATGAACAGCAACAGCATAAAGACC | + |
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Preference number: 6 (lower is better) Translates to: GHRWAATCQAGL*SNTMNSNSIKT Trigger: GGTCTTTATGCTGTTGCTGTTCATGGTGTTGCTCCAGAGCCCAGCCTGGCACGTAGCTGCCCAGCGATGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS GCA 72 bp | TCAGGGATGGTGTTTGGCACCTCGGTGAGGTTCTGGTaGCGGCAGGTAACATGCCGTCTTGAGTTGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SGMVFGTSVRFW*RQVTCRLELSQ Trigger: CTGCGACAACTCAAGACGGCATGTTACCTGCCGGCACCAGAACCTCACCGAGGTGCCAAACACCATCCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 72 bp | AGCTCAGGGATGGTGTTTGGCACCTCGGTGAGGTTCTaGTGCCGGCAGGTAACATGCCGTCTTGAGTTGTCG | + |
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Preference number: 6 (lower is better) Translates to: SSGMVFGTSVRF*CRQVTCRLELS Trigger: CGACAACTCAAGACGGCATGTTACCTGCCGGCACCAGAACCTCACCGAGGTGCCAAACACCATCCCTGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072910.6 |
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| CDS CCA 72 bp | AGCTCCGCAGCCCTTTTCCCAGGCCTGAGAAGGCCCTaGGAGAAATCTGCTCCAGGTCACTGCTATTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSAALFPGLRRP*EKSAPGHCYSG Trigger: TCCTGAATAGCAGTGACCTGGAGCAGATTTCTCCCAGGGCCTTCTCAGGCCTGGGAAAAGGGCTGCGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072910.6 ENSMUST00000173598.8 |
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