Pregenerated sensors for CHAD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039084Ensembl transcript IDs: ENSMUST00000040418.9
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCATGTCCTGGCAGGCAGGAACTGGCAGAGTTGGGGCATGGGCCTaGAATTCTTTCTGGCAATCAGGGTGGGTCAGGGGCCTGATGTTT | + |
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Preference number: 1 (lower is better) Translates to: SMSWQAGTGRVGAWA*NSFWQSGWVRGLMF Trigger: AAACATCAGGCCCCTGACCCACCCTGATTGCCAGAAAGAATTTCAGGCCCATGCCCCAACTCTGCCAGTTCCTGCCTGCCAGGACATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| 3UTR CCA 90 bp | TACAATAGCTTCTCTCAAAGGAGCCATGGCAGAGCCCAGACACAGTaGCTGGGGAGGGATTCTGTGTCTTTCCTAGGACCCCACTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: YNSFSQRSHGRAQTQ*LGRDSVSFLGPHWV Trigger: CACCCAGTGGGGTCCTAGGAAAGACACAGAATCCCTCCCCAGCCACTGTGTCTGGGCTCTGCCATGGCTCCTTTGAGAGAAGCTATTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| 3UTR TCA 90 bp | CATGGGCCTGAAATTCTTTCTGGCAATCAGGGTGGGTCAGGGGCCTaGTGTTTGTTTCCAAATGGCAGGGACAGAGGGAACCGAGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: HGPEILSGNQGGSGA*CLFPNGRDRGNRGR Trigger: CCTTCCTCGGTTCCCTCTGTCCCTGCCATTTGGAAACAAACATCAGGCCCCTGACCCACCCTGATTGCCAGAAAGAATTTCAGGCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| 3UTR CCA 90 bp | AGAAATCTGGAGCGCAAACAGGAAGGATATGCAGCCAAGCGCTACTaGTATCCTGGTAGCATGTCCTGGCAGGCAGGAACTGGCAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: RNLERKQEGYAAKRY*YPGSMSWQAGTGRV Trigger: AACTCTGCCAGTTCCTGCCTGCCAGGACATGCTACCAGGATACCAGTAGCGCTTGGCTGCATATCCTTCCTGTTTGCGCTCCAGATTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGGTCAGGGGCCTGATGTTTGTTTCCAAATGGCAGGGACAGAGGGAACCGAGAGCCCAGACACAGTaGCTGGGGAGGGATTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GWVRGLMFVSKWQGQREPRAQTQ*LGRDSV Trigger: CACAGAATCCCTCCCCAGCCACTGTGTCTGGGCTCT...CGGTTCCCTCTGTCCCTGCCATTTGGAAACAAACATCAGGCCCCTGACCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| 3UTR CCA 72 bp | TTCTCTCAAAGGAGCCATGGCAGAGCCCAGACACAGTaGCTGGGGAGGGATTCTGTGTCTTTCCTAGGACCC | + |
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Preference number: 3 (lower is better) Translates to: FSQRSHGRAQTQ*LGRDSVSFLGP Trigger: GGGTCCTAGGAAAGACACAGAATCCCTCCCCAGCCACTGTGTCTGGGCTCTGCCATGGCTCCTTTGAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| 3UTR CCA 72 bp | TCAGGGTGGGTCAGGGGCCTGATGTTTGTTTCCAAATaGCAGGGACAGAGGGAACCGAGGAAGGTGGTAATA | + |
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Preference number: 3 (lower is better) Translates to: SGWVRGLMFVSK*QGQREPRKVVI Trigger: TATTACCACCTTCCTCGGTTCCCTCTGTCCCTGCCATTTGGAAACAAACATCAGGCCCCTGACCCACCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| 3UTR TCA 72 bp | GAAATTCTTTCTGGCAATCAGGGTGGGTCAGGGGCCTaGTGTTTGTTTCCAAATGGCAGGGACAGAGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: EILSGNQGGSGA*CLFPNGRDRGN Trigger: GTTCCCTCTGTCCCTGCCATTTGGAAACAAACATCAGGCCCCTGACCCACCCTGATTGCCAGAAAGAATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | TGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGAGGTCCTTGGCCCCCTaGAAAGCTCCAGCACGCAGC | + |
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Preference number: 4 (lower is better) Translates to: WEGTSVVSPAEGSRQDWLRSLAP*KAPARS Trigger: GCTGCGTGCTGGAGCTTTCCAGGGGGCCAAGGACCT...CAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGCCAGCGCAGGTCCTTaGCCCCCTGGAAAGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: MGGNVSSLSSGRQSPGLAASAGP*PPGKLQ Trigger: CTGGAGCTTTCCAGGGGGCCAAGGACCTGCGCTGGC...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR GCA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTCCACCTCGCGGATGTTaGAGTGTTGCAGGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: MGGNVSSLSSGRQSPGLAPPRGC*SVAGAG Trigger: CCCTGCACCTGCAACACTGCAACATCCGCGAGGTGG...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR TCA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGTGTCACGAATCCGCTaGCCCTTGAACTTGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: MGGNVSSLSSGRQSPGLAVSRIR*PLNLAG Trigger: GCCAGCCAAGTTCAAGGGTCAGCGGATTCGTGACAC...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR GCA 90 bp | TCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGGATCAGGACCTGTTGCAGTGTTGCAGGTaGAGGGAGACCAGGTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: SVVSPAEGSRQDWLDQDLLQCCR*RETRFG Trigger: GCCGAACCTGGTCTCCCTGCACCTGCAACACTGCAA...CAGGTCCTGATCCAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTTGGTCCGAAACGAGTTaGCAGCCAGCACCGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: MGGNVSSLSSGRQSPGLAWSETS*QPAPGS Trigger: ACTTCCCGGTGCTGGCTGCCAACTCGTTTCGGACCA...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | TCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGGATCAGGACCTGGGCGGCCAGCTTTCTTaGACCTCTTGGTCGGGGATT | + |
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Preference number: 4 (lower is better) Translates to: SVVSPAEGSRQDWLDQDLGGQLS*TSWSGI Trigger: AATCCCCGACCAAGAGGTCCAAGAAAGCTGGCCGCC...CAGGTCCTGATCCAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR TCA 90 bp | TCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGGATCAGGACCTGCAGGCTGCAGGGAACTaGGGGCATTTTCTGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: SVVSPAEGSRQDWLDQDLQAAGN*GHFLTG Trigger: ACCTGTCAGAAAATGCCCTCAGTTCCCTGCAGCCTG...CAGGTCCTGATCCAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR TCA 90 bp | TGGATAATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGATTTGCTCAGGGCGGCTaGGGGGTAGCTAGACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: WIMGGNVSSLSSGRQSPGFAQGG*GVARQL Trigger: CAGCTGTCTAGCTACCCCTCAGCCGCCCTGAGCAAA...TCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCATTATCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR GCA 90 bp | GGGTGGGTCAGGGGCCTGATGTTTGTTTCCAAATGGCAGGGACAGAGGGAACCGACCTTGGGGATCTTCTaGAGCCCCACCTTGTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: GWVRGLMFVSKWQGQREPTLGIF*SPTLSQ Trigger: CTGCGACAAGGTGGGGCTGCAGAAGATCCCCAAGGT...CGGTTCCCTCTGTCCCTGCCATTTGGAAACAAACATCAGGCCCCTGACCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR GCA 90 bp | CGCTACTGGTATCCTGGTAGCATGTCCTGGCAGGCAGGAACTGGCAGAGTTGGGCGGATGTTGCAGTGTTaGAGGTGCAGGGAGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: RYWYPGSMSWQAGTGRVGRMLQC*RCRETR Trigger: CCTGGTCTCCCTGCACCTGCAACACTGCAACATCCG...CCCAACTCTGCCAGTTCCTGCCTGCCAGGACATGCTACCAGGATACCAGTAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR GCA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTCACGGAGCTGGCAGGTaGATTTCCATGGGTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: MGGNVSSLSSGRQSPGLAHGAGR*ISMGCW Trigger: CCAACAACCCATGGAAATGCACCTGCCAGCTCCGTG...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTTGCTGCAGATCTCCATaGCAGTGGCAGTTTTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: MGGNVSSLSSGRQSPGLACCRSP*QWQFWG Trigger: CCCCCAAAACTGCCACTGCCATGGAGATCTGCAGCA...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTAGACCAGGTTCGGCATaGTCCGAAACGAGTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: MGGNVSSLSSGRQSPGLARPGSA*SETSWQ Trigger: CTGCCAACTCGTTTCGGACCATGCCGAACCTGGTCT...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTACCCTTGAACTTGGCTaGCGAGGAGCAGGTAGCATC | + |
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Preference number: 4 (lower is better) Translates to: MGGNVSSLSSGRQSPGLATLELG*RGAGSI Trigger: GATGCTACCTGCTCCTCGCCAGCCAAGTTCAAGGGT...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR TCA 90 bp | GGGTGGGTCAGGGGCCTGATGTTTGTTTCCAAATGGCAGGGACAGAGGGAACCGCAAGAAAGACCAGACTaGATAAGAGCGCGCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GWVRGLMFVSKWQGQREPQERPD*IRARGP Trigger: TGGCCCGCGCGCTCTTATTCAGTCTGGTCTTTCTTG...CGGTTCCCTCTGTCCCTGCCATTTGGAAACAAACATCAGGCCCCTGACCCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR TCA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTCCACCTTGTCGCAGATaGCATGCTGCAGATCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: MGGNVSSLSSGRQSPGLAPPCRR*HAADLH Trigger: ATGGAGATCTGCAGCATGTCATCTGCGACAAGGTGG...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR GCA 90 bp | CGCTACTGGTATCCTGGTAGCATGTCCTGGCAGGCAGGAACTGGCAGAGTTGGGTCCAGGGAACCAGGCTaGAGGGAACTGAGGGCATTT | + |
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Preference number: 4 (lower is better) Translates to: RYWYPGSMSWQAGTGRVGSREPG*RELRAF Trigger: AAATGCCCTCAGTTCCCTGCAGCCTGGTTCCCTGGA...CCCAACTCTGCCAGTTCCTGCCTGCCAGGACATGCTACCAGGATACCAGTAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | TCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGGATCAGGACCTGAAGGAGGAAGGCAGTTaGTTCAGGCGGTTGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SVVSPAEGSRQDWLDQDLKEEGS*FRRLLS Trigger: GGACAACAACCGCCTGAACCAACTGCCTTCCTCCTT...CAGGTCCTGATCCAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTCTTTCTTGGACCTCTTaGTCGGGGATTTGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MGGNVSSLSSGRQSPGLALSWTS*SGICSC Trigger: GCAGCTGCAAATCCCCGACCAAGAGGTCCAAGAAAG...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR GCA 90 bp | TCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGGATCAGGACCTGAGGCATTGTCTGGGATaGTCTTCAGAGGGTTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SVVSPAEGSRQDWLDQDLRHCLG*SSEGCE Trigger: CTCACAACCCTCTGAAGAGCATCCCAGACAATGCCT...CAGGTCCTGATCCAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | TCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGGATCAGGACCTGCTGGAAGGCATTGTCTaGGATGCTCTTCAGAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: SVVSPAEGSRQDWLDQDLLEGIV*DALQRV Trigger: AACCCTCTGAAGAGCATCCCAGACAATGCCTTCCAG...CAGGTCCTGATCCAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | TGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGTATCTACCGAAGGACTaGAAGGCATTGTCTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: WEGTSVVSPAEGSRQDWLYLPKD*KALSGM Trigger: CATCCCAGACAATGCCTTCCAGTCCTTCGGTAGATA...CAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR TCA 90 bp | TCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGGATCAGGACCTGCAGTTTGGTTGTCTCTaGTACCTTGGGGATCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SVVSPAEGSRQDWLDQDLQFGCL*YLGDLL Trigger: CAGAAGATCCCCAAGGTATCAGAGACAACCAAACTG...CAGGTCCTGATCCAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR TCA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTCTAGATAGAGGTAAGTaGGTTCAGTCAGGTCGTCGA | + |
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Preference number: 4 (lower is better) Translates to: MGGNVSSLSSGRQSPGLALDRGK*VQSGRR Trigger: TCGACGACCTGACTGAACTCACTTACCTCTATCTAG...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | GGGTGGGTCAGGGGCCTGATGTTTGTTTCCAAATGGCAGGGACAGAGGGAACCGTTGTCTCTGATACCTTaGGGATCTTCTGCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GWVRGLMFVSKWQGQREPLSLIP*GSSAAP Trigger: TGGGGCTGCAGAAGATCCCCAAGGTATCAGAGACAA...CGGTTCCCTCTGTCCCTGCCATTTGGAAACAAACATCAGGCCCCTGACCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | TCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGGATCAGGACCTGGGGAAGTTGTTGCGCTaGAGATTGAGCAGTTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: SVVSPAEGSRQDWLDQDLGKLLR*RLSSLV Trigger: AACCAAACTGCTCAATCTCCAGCGCAACAACTTCCC...CAGGTCCTGATCCAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | GGGTGGGTCAGGGGCCTGATGTTTGTTTCCAAATGGCAGGGACAGAGGGAACCGCGGTTGTTGTCCAGATaGACGTGTTTCAGTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: GWVRGLMFVSKWQGQREPRLLSR*TCFSVV Trigger: GACCACACTGAAACACGTCCATCTGGACAACAACCG...CGGTTCCCTCTGTCCCTGCCATTTGGAAACAAACATCAGGCCCCTGACCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR GCA 90 bp | TGGATAATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGATTGTCGCAGATGACATaGTGCAGATCTCCATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: WIMGGNVSSLSSGRQSPGLSQMT*CRSPWQ Trigger: CTGCCATGGAGATCTGCAGCATGTCATCTGCGACAA...TCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCATTATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | GGGTGGGTCAGGGGCCTGATGTTTGTTTCCAAATGGCAGGGACAGAGGGAACCGTGTCCAGGTGGAACTTaGCTAGGTTCTCCACATCAT | + |
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Preference number: 4 (lower is better) Translates to: GWVRGLMFVSKWQGQREPCPGGT*LGSPHH Trigger: ATGATGTGGAGAACCTAGCCAAGTTCCACCTGGACA...CGGTTCCCTCTGTCCCTGCCATTTGGAAACAAACATCAGGCCCCTGACCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | ACATACATTTATGTTTATAGAAATCTGGAGCGCAAACAGGAAGGATATGCAGCCAGATCTCCATGGCAGTaGCAGTTTTGGGGGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: TYIYVYRNLERKQEGYAARSPWQ*QFWGQA Trigger: CGCCTGCCCCCAAAACTGCCACTGCCATGGAGATCT...GGCTGCATATCCTTCCTGTTTGCGCTCCAGATTTCTATAAACATAAATGTATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR TCA 90 bp | ACATACATTTATGTTTATAGAAATCTGGAGCGCAAACAGGAAGGATATGCAGCCACTGAGGGCATTTTCTaGCAGGTAGAGCCAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: TYIYVYRNLERKQEGYAATEGIF*QVEPAQ Trigger: CTGCGCTGGCTCTACCTGTCAGAAAATGCCCTCAGT...GGCTGCATATCCTTCCTGTTTGCGCTCCAGATTTCTATAAACATAAATGTATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR GCA 90 bp | ACATACATTTATGTTTATAGAAATCTGGAGCGCAAACAGGAAGGATATGCAGCCTCTTGGTCGGGGATTTaGAGCTGCGAAGGGCATCTG | + |
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Preference number: 4 (lower is better) Translates to: TYIYVYRNLERKQEGYAASWSGI*SCEGHL Trigger: CAGATGCCCTTCGCAGCTGCAAATCCCCGACCAAGA...GGCTGCATATCCTTCCTGTTTGCGCTCCAGATTTCTATAAACATAAATGTATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CCA 90 bp | ACATACATTTATGTTTATAGAAATCTGGAGCGCAAACAGGAAGGATATGCAGCCGGACGTGTTTCAGTGTaGTCACACCCGAGAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TYIYVYRNLERKQEGYAAGRVSV*SHPRRQ Trigger: CTGCCTTCTCGGGTGTGACCACACTGAAACACGTCC...GGCTGCATATCCTTCCTGTTTGCGCTCCAGATTTCTATAAACATAAATGTATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS GCA 90 bp | CGGAAGGCACCAGCCGCCACCTCGCGGATGTTGCAGTGTTGCAGGTaGAGGGAGACCAGGTTCGGCATGGTCCGAAACGAGTTGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: RKAPAATSRMLQCCR*RETRFGMVRNELAA Trigger: GGCTGCCAACTCGTTTCGGACCATGCCGAACCTGGTCTCCCTGCACCTGCAACACTGCAACATCCGCGAGGTGGCGGCTGGTGCCTTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS GCA 90 bp | GCTGCTTCAGGCCTCGGAAGGCACCAGCCGCCACCTCGCGGATGTTaGAGTGTTGCAGGTGCAGGGAGACCAGGTTCGGCATGGTCCGAA | + |
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Preference number: 5 (lower is better) Translates to: AASGLGRHQPPPRGC*SVAGAGRPGSAWSE Trigger: TTCGGACCATGCCGAACCTGGTCTCCCTGCACCTGCAACACTGCAACATCCGCGAGGTGGCGGCTGGTGCCTTCCGAGGCCTGAAGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CAA 90 bp | CGCTACTGGTATCCTGGTAGCATGTCCTGGCAGGCAGGAACTGGCAGAGTTGGGTCCACCACCCGAAGTTaGCTCAGGGCGGCTGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: RYWYPGSMSWQAGTGRVGSTTRS*LRAAEG Trigger: CCCCTCAGCCGCCCTGAGCAAACTTCGGGTGGTGGA...CCCAACTCTGCCAGTTCCTGCCTGCCAGGACATGCTACCAGGATACCAGTAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS-3UTR CAA 90 bp | TGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGTGGCGGCCAGCTTTCTaGGACCTCTTGGTCGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: WEGTSVVSPAEGSRQDWLWRPAF*DLLVGD Trigger: ATCCCCGACCAAGAGGTCCAAGAAAGCTGGCCGCCA...CAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CCA 90 bp | GGTCGAGAAGCCTTGGCTTCCAACCACCGCCGAAGGCCACGGAGCTaGCAGGTGCATTTCCATGGGTTGTTGGTGAGAGTGAGGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GREALASNHRRRPRS*QVHFHGLLVRVRVS Trigger: GGAGACCCTCACTCTCACCAACAACCCATGGAAATGCACCTGCCAGCTCCGTGGCCTTCGGCGGTGGTTGGAAGCCAAGGCTTCTCGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTATGGTCCGAAACGAGTaGGCAGCCAGCACCGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MGGNVSSLSSGRQSPGLAMVRNE*AASTGK Trigger: CTTCCCGGTGCTGGCTGCCAACTCGTTTCGGACCAT...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | TGGATAATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGAAGCCAGCGCAGGTCCTaGGCCCCCTGGAAAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WIMGGNVSSLSSGRQSPGSQRRS*APWKAP Trigger: TGGAGCTTTCCAGGGGGCCAAGGACCTGCGCTGGCT...TCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCATTATCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS TCA 90 bp | CACATCATCCAGGGAACCAGGCTGCAGGGAACTGAGGGCATTTTCTaGCAGGTAGAGCCAGCGCAGGTCCTTGGCCCCCTGGAAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HIIQGTRLQGTEGIF*QVEPAQVLGPLESS Trigger: GGAGCTTTCCAGGGGGCCAAGGACCTGCGCTGGCTCTACCTGTCAGAAAATGCCCTCAGTTCCCTGCAGCCTGGTTCCCTGGATGATGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS TCA 90 bp | GTCGGGGATTTGCAGCTGCGAAGGGCATCTGTGTCACGAATCCGCTaGCCCTTGAACTTGGCTGGCGAGGAGCAGGTAGCATCCGGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VGDLQLRRASVSRIR*PLNLAGEEQVASGR Trigger: TCGACCGGATGCTACCTGCTCCTCGCCAGCCAAGTTCAAGGGTCAGCGGATTCGTGACACAGATGCCCTTCGCAGCTGCAAATCCCCGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | CGCTACTGGTATCCTGGTAGCATGTCCTGGCAGGCAGGAACTGGCAGAGTTGGGGCCAGCACCGGGAAGTaGTTGCGCTGGAGATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RYWYPGSMSWQAGTGRVGASTGK*LRWRLS Trigger: GCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGC...CCCAACTCTGCCAGTTCCTGCCTGCCAGGACATGCTACCAGGATACCAGTAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | CGCTACTGGTATCCTGGTAGCATGTCCTGGCAGGCAGGAACTGGCAGAGTTGGGGCGGATGTTGCAGTGTaGCAGGTGCAGGGAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: RYWYPGSMSWQAGTGRVGADVAV*QVQGDQ Trigger: CTGGTCTCCCTGCACCTGCAACACTGCAACATCCGC...CCCAACTCTGCCAGTTCCTGCCTGCCAGGACATGCTACCAGGATACCAGTAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | TGGATAATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGAGCCACCTCGCGGATGTaGCAGTGTTGCAGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WIMGGNVSSLSSGRQSPGATSRM*QCCRCR Trigger: CCTGCACCTGCAACACTGCAACATCCGCGAGGTGGC...TCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCATTATCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS TCA 90 bp | AGACAGCTTCAGCTCCTCCACCACCCGAAGTTTGCTCAGGGCGGCTaGGGGGTAGCTAGACAGCTGGTTCTTGTCCAGGTGGAACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQLQLLHHPKFAQGG*GVARQLVLVQVELG Trigger: GCCAAGTTCCACCTGGACAAGAACCAGCTGTCTAGCTACCCCTCAGCCGCCCTGAGCAAACTTCGGGTGGTGGAGGAGCTGAAGCTGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CCA 90 bp | TTGTCGCAGATGACATGCTGCAGATCTCCATGGCAGTGGCAGTTTTaGGGGCAGGCGGCTAGCGCAGGCAGGAGGATGGCAAGAAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LSQMTCCRSPWQWQF*GQAASAGRRMARKT Trigger: GGTCTTTCTTGCCATCCTCCTGCCTGCGCTAGCCGCCTGCCCCCAAAACTGCCACTGCCATGGAGATCTGCAGCATGTCATCTGCGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CCA 90 bp | GCGAAGGGCATCTGTGTCACGAATCCGCTGACCCTTGAACTTGGCTaGCGAGGAGCAGGTAGCATCCGGTCGAGAAGCCTTGGCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AKGICVTNPLTLELG*RGAGSIRSRSLGFQ Trigger: TTGGAAGCCAAGGCTTCTCGACCGGATGCTACCTGCTCCTCGCCAGCCAAGTTCAAGGGTCAGCGGATTCGTGACACAGATGCCCTTCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTAGCACCGGGAAGTTGTaGCGCTGGAGATTGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: MGGNVSSLSSGRQSPGLASTGKL*RWRLSS Trigger: ACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCT...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | TCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGGATCAGGACCTGGCTTTCTTGGACCTCTaGGTCGGGGATTTGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVVSPAEGSRQDWLDQDLAFLDL*VGDLQL Trigger: CAGCTGCAAATCCCCGACCAAGAGGTCCAAGAAAGC...CAGGTCCTGATCCAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS TCA 90 bp | CCGAAGGACTGGAAGGCATTGTCTGGGATGCTCTTCAGAGGGTTGTaGGACAGCTTCAGCTCCTCCACCACCCGAAGTTTGCTCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PKDWKALSGMLFRGL*DSFSSSTTRSLLRA Trigger: CGCCCTGAGCAAACTTCGGGTGGTGGAGGAGCTGAAGCTGTCTCACAACCCTCTGAAGAGCATCCCAGACAATGCCTTCCAGTCCTTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CCA 90 bp | TTCCAACCACCGCCGAAGGCCACGGAGCTGGCAGGTGCATTTCCATaGGTTGTTGGTGAGAGTGAGGGTCTCCAGGTTGTCAAAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FQPPPKATELAGAFP*VVGESEGLQVVKGE Trigger: TTCCCCTTTGACAACCTGGAGACCCTCACTCTCACCAACAACCCATGGAAATGCACCTGCCAGCTCCGTGGCCTTCGGCGGTGGTTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGGGTCAGGGGCCTGATGTTTGTTTCCAAATGGCAGGGACAGAGGGAACCGGTTGTCTCTGATACCTaGGGGATCTTCTGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GWVRGLMFVSKWQGQREPVVSDT*GIFCSP Trigger: GGGGCTGCAGAAGATCCCCAAGGTATCAGAGACAAC...CGGTTCCCTCTGTCCCTGCCATTTGGAAACAAACATCAGGCCCCTGACCCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | ATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGTGCATTTCCATGGGTaGTTGGTGAGAGTGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MGGNVSSLSSGRQSPGLAVHFHG*LVRVRV Trigger: GACCCTCACTCTCACCAACAACCCATGGAAATGCAC...AGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | TGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGTTGTTGCGCTGGAGATaGAGCAGTTTGGTTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WEGTSVVSPAEGSRQDWLLLRWR*SSLVVS Trigger: AGAGACAACCAAACTGCTCAATCTCCAGCGCAACAA...CAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | TCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGGATCAGGACCTGTTGTCCAGGTGGAACTaGGCTAGGTTCTCCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: SVVSPAEGSRQDWLDQDLLSRWN*ARFSTS Trigger: TGATGTGGAGAACCTAGCCAAGTTCCACCTGGACAA...CAGGTCCTGATCCAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGGGTCAGGGGCCTGATGTTTGTTTCCAAATGGCAGGGACAGAGGGAACCGCTAGACAGCTGGTTCTaGTCCAGGTGGAACTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GWVRGLMFVSKWQGQREPLDSWF*SRWNLA Trigger: AGCCAAGTTCCACCTGGACAAGAACCAGCTGTCTAG...CGGTTCCCTCTGTCCCTGCCATTTGGAAACAAACATCAGGCCCCTGACCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | TCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGACTGGCTGGATCAGGACCTGAAGGACTGGAAGGCATaGTCTGGGATGCTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVVSPAEGSRQDWLDQDLKDWKA*SGMLFR Trigger: TCTGAAGAGCATCCCAGACAATGCCTTCCAGTCCTT...CAGGTCCTGATCCAGCCAGTCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | CGCTACTGGTATCCTGGTAGCATGTCCTGGCAGGCAGGAACTGGCAGAGTTGGGGAGAACTTCTCCAGGTaGGTGTTATCCAGCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RYWYPGSMSWQAGTGRVGENFSR*VLSSQR Trigger: CCTCTGGCTGGATAACACCAACCTGGAGAAGTTCTC...CCCAACTCTGCCAGTTCCTGCCTGCCAGGACATGCTACCAGGATACCAGTAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS TCA 90 bp | CCCGGGGCAGTTCCGACACTTTGTTGTGGTCTAGATAGAGGTAAGTaGGTTCAGTCAGGTCGTCGAAGGCTCCAGCTCGCAATACCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGAVPTLCCGLDRGK*VQSGRRRLQLAIPG Trigger: TCCGGGTATTGCGAGCTGGAGCCTTCGACGACCTGACTGAACTCACTTACCTCTATCTAGACCACAACAAAGTGTCGGAACTGCCCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS GCA 90 bp | GGGTCTCCAGATATCTACCGAAGGACTGGAAGGCATTGTCTGGGATaGTCTTCAGAGGGTTGTGAGACAGCTTCAGCTCCTCCACCACCC | + |
|
Preference number: 5 (lower is better) Translates to: GSPDIYRRTGRHCLG*SSEGCETASAPPPP Trigger: GGGTGGTGGAGGAGCTGAAGCTGTCTCACAACCCTCTGAAGAGCATCCCAGACAATGCCTTCCAGTCCTTCGGTAGATATCTGGAGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CCA 90 bp | AAGGGGAAGGAGGAAGGCAGTTGGTTCAGGCGGTTGTTGTCCAGATaGACGTGTTTCAGTGTGGTCACACCCGAGAAGGCAGCATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KGKEEGSWFRRLLSR*TCFSVVTPEKAASE Trigger: CTCAGATGCTGCCTTCTCGGGTGTGACCACACTGAAACACGTCCATCTGGACAACAACCGCCTGAACCAACTGCCTTCCTCCTTCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | CGCTACTGGTATCCTGGTAGCATGTCCTGGCAGGCAGGAACTGGCAGAGTTGGGTGCAAGATGAAGAGGTaGACCAGAGGAGAGAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RYWYPGSMSWQAGTGRVGCKMKR*TRGESN Trigger: GTTGCTCTCTCCTCTGGTCAACCTCTTCATCTTGCA...CCCAACTCTGCCAGTTCCTGCCTGCCAGGACATGCTACCAGGATACCAGTAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | TGGATAATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGATGGTTCAGGCGGTTGTaGTCCAGATGGACGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WIMGGNVSSLSSGRQSPGWFRRL*SRWTCF Trigger: GAAACACGTCCATCTGGACAACAACCGCCTGAACCA...TCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCATTATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS TCA 90 bp | CACCGGGAAGTTGTTGCGCTGGAGATTGAGCAGTTTGGTTGTCTCTaGTACCTTGGGGATCTTCTGCAGCCCCACCTTGTCGCAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: HREVVALEIEQFGCL*YLGDLLQPHLVADD Trigger: GTCATCTGCGACAAGGTGGGGCTGCAGAAGATCCCCAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS TCA 90 bp | GAAACGAGTTGGCAGCCAGCACCGGGAAGTTGTTGCGCTGGAGATTaGGCAGTTTGGTTGTCTCTGATACCTTGGGGATCTTCTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ETSWQPAPGSCCAGD*AVWLSLIPWGSSAA Trigger: GGCTGCAGAAGATCCCCAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAACTCGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CCA 90 bp | GCAGTTGGTTCAGGCGGTTGTTGTCCAGATGGACGTGTTTCAGTGTaGTCACACCCGAGAAGGCAGCATCTGAGAACTTCTCCAGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVGSGGCCPDGRVSV*SHPRRQHLRTSPGW Trigger: CCAACCTGGAGAAGTTCTCAGATGCTGCCTTCTCGGGTGTGACCACACTGAAACACGTCCATCTGGACAACAACCGCCTGAACCAACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CCA 90 bp | ATGGTCCGAAACGAGTTGGCAGCCAGCACCGGGAAGTTGTTGCGCTaGAGATTGAGCAGTTTGGTTGTCTCTGATACCTTGGGGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MVRNELAASTGKLLR*RLSSLVVSDTLGIF Trigger: GAAGATCCCCAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAACTCGTTTCGGACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | CGCTACTGGTATCCTGGTAGCATGTCCTGGCAGGCAGGAACTGGCAGAGTTGGGCGGATTTTGTTGTTGTaGAGTTGCAAGATGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RYWYPGSMSWQAGTGRVGRILLL*SCKMKR Trigger: CCTCTTCATCTTGCAACTCAACAACAACAAAATCCG...CCCAACTCTGCCAGTTCCTGCCTGCCAGGACATGCTACCAGGATACCAGTAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGGGTCAGGGGCCTGATGTTTGTTTCCAAATGGCAGGGACAGAGGGAACCGAGCTCTCGGATTTTGTaGTTGTTGAGTTGCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GWVRGLMFVSKWQGQREPSSRIL*LLSCKM Trigger: CATCTTGCAACTCAACAACAACAAAATCCGAGAGCT...CGGTTCCCTCTGTCCCTGCCATTTGGAAACAAACATCAGGCCCCTGACCCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | TGGATAATGGGAGGGAACGTCAGTAGTCTCTCCAGCGGAAGGCAGTCGCCAGGATTTGTTGTTGTTGAGTaGCAAGATGAAGAGGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: WIMGGNVSSLSSGRQSPGFVVVE*QDEEVD Trigger: GTCAACCTCTTCATCTTGCAACTCAACAACAACAAA...TCCTGGCGACTGCCTTCCGCTGGAGAGACTACTGACGTTCCCTCCCATTATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS-3UTR CAA 90 bp | ACATACATTTATGTTTATAGAAATCTGGAGCGCAAACAGGAAGGATATGCAGCCGTGAGGGTCTCCAGGTaGTCAAAGGGGAAGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TYIYVYRNLERKQEGYAAVRVSR*SKGKEE Trigger: TTCCTCCTTCCCCTTTGACAACCTGGAGACCCTCAC...GGCTGCATATCCTTCCTGTTTGCGCTCCAGATTTCTATAAACATAAATGTATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS GCA 72 bp | GGCCTCGGAAGGCACCAGCCGCCACCTCGCGGATGTTaGAGTGTTGCAGGTGCAGGGAGACCAGGTTCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLGRHQPPPRGC*SVAGAGRPGSA Trigger: TGCCGAACCTGGTCTCCCTGCACCTGCAACACTGCAACATCCGCGAGGTGGCGGCTGGTGCCTTCCGAGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CAA 72 bp | GCTGGCGAGGAGCAGGTAGCATCCGGTCGAGAAGCCTaGGCTTCCAACCACCGCCGAAGGCCACGGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGEEQVASGREA*ASNHRRRPRSW Trigger: CCAGCTCCGTGGCCTTCGGCGGTGGTTGGAAGCCAAGGCTTCTCGACCGGATGCTACCTGCTCCTCGCCAGC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CAA 72 bp | GAAGGCACCAGCCGCCACCTCGCGGATGTTGCAGTGTaGCAGGTGCAGGGAGACCAGGTTCGGCATGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: EGTSRHLADVAV*QVQGDQVRHGP Trigger: CGGACCATGCCGAACCTGGTCTCCCTGCACCTGCAACACTGCAACATCCGCGAGGTGGCGGCTGGTGCCTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS GCA 72 bp | CCAGCCGCCACCTCGCGGATGTTGCAGTGTTGCAGGTaGAGGGAGACCAGGTTCGGCATGGTCCGAAACGAG | + |
|
Preference number: 6 (lower is better) Translates to: PAATSRMLQCCR*RETRFGMVRNE Trigger: CTCGTTTCGGACCATGCCGAACCTGGTCTCCCTGCACCTGCAACACTGCAACATCCGCGAGGTGGCGGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CAA 90 bp | CAGGCCTCGGAAGGCACCAGCCGCCACCTCGCGGATGTTGCAGTGTaGCAGGTGCAGGGAGACCAGGTTCGGCATGGTCCGAAACGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: QASEGTSRHLADVAV*QVQGDQVRHGPKRV Trigger: AACTCGTTTCGGACCATGCCGAACCTGGTCTCCCTGCACCTGCAACACTGCAACATCCGCGAGGTGGCGGCTGGTGCCTTCCGAGGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CCA 72 bp | GGGCATTTTCTGACAGGTAGAGCCAGCGCAGGTCCTTaGCCCCCTGGAAAGCTCCAGCACGCAGCTCTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: GHFLTGRASAGP*PPGKLQHAALG Trigger: TCCGAGAGCTGCGTGCTGGAGCTTTCCAGGGGGCCAAGGACCTGCGCTGGCTCTACCTGTCAGAAAATGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS TCA 72 bp | CAGCTCCTCCACCACCCGAAGTTTGCTCAGGGCGGCTaGGGGGTAGCTAGACAGCTGGTTCTTGTCCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QLLHHPKFAQGG*GVARQLVLVQV Trigger: CACCTGGACAAGAACCAGCTGTCTAGCTACCCCTCAGCCGCCCTGAGCAAACTTCGGGTGGTGGAGGAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CCA 72 bp | TTGTCGCAGATGACATGCTGCAGATCTCCATGGCAGTaGCAGTTTTGGGGGCAGGCGGCTAGCGCAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSQMTCCRSPWQ*QFWGQAASAGR Trigger: CCTGCCTGCGCTAGCCGCCTGCCCCCAAAACTGCCACTGCCATGGAGATCTGCAGCATGTCATCTGCGACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CCA 72 bp | CCCACCTTGTCGCAGATGACATGCTGCAGATCTCCATaGCAGTGGCAGTTTTGGGGGCAGGCGGCTAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PTLSQMTCCRSP*QWQFWGQAASA Trigger: TGCGCTAGCCGCCTGCCCCCAAAACTGCCACTGCCATGGAGATCTGCAGCATGTCATCTGCGACAAGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CCA 72 bp | GCAGGGAGACCAGGTTCGGCATGGTCCGAAACGAGTTaGCAGCCAGCACCGGGAAGTTGTTGCGCTGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: AGRPGSAWSETS*QPAPGSCCAGD Trigger: ATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAACTCGTTTCGGACCATGCCGAACCTGGTCTCCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CCA 72 bp | CCGCCGAAGGCCACGGAGCTGGCAGGTGCATTTCCATaGGTTGTTGGTGAGAGTGAGGGTCTCCAGGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PPKATELAGAFP*VVGESEGLQVV Trigger: GACAACCTGGAGACCCTCACTCTCACCAACAACCCATGGAAATGCACCTGCCAGCTCCGTGGCCTTCGGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
||
| CDS CCA 72 bp | GCCTTGGCTTCCAACCACCGCCGAAGGCCACGGAGCTaGCAGGTGCATTTCCATGGGTTGTTGGTGAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALASNHRRRPRS*QVHFHGLLVRV Trigger: CACTCTCACCAACAACCCATGGAAATGCACCTGCCAGCTCCGTGGCCTTCGGCGGTGGTTGGAAGCCAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 72 bp | TGCAGGGAGACCAGGTTCGGCATGGTCCGAAACGAGTaGGCAGCCAGCACCGGGAAGTTGTTGCGCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: CRETRFGMVRNE*AASTGKLLRWR Trigger: TCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAACTCGTTTCGGACCATGCCGAACCTGGTCTCCCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS GCA 72 bp | GGCGGCCAGCTTTCTTGGACCTCTTGGTCGGGGATTTaGAGCTGCGAAGGGCATCTGTGTCACGAATCCGCT | + |
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Preference number: 6 (lower is better) Translates to: GGQLSWTSWSGI*SCEGHLCHESA Trigger: AGCGGATTCGTGACACAGATGCCCTTCGCAGCTGCAAATCCCCGACCAAGAGGTCCAAGAAAGCTGGCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 72 bp | TGGCGGCCAGCTTTCTTGGACCTCTTGGTCGGGGATTaGCAGCTGCGAAGGGCATCTGTGTCACGAATCCGC | + |
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Preference number: 6 (lower is better) Translates to: WRPAFLDLLVGD*QLRRASVSRIR Trigger: GCGGATTCGTGACACAGATGCCCTTCGCAGCTGCAAATCCCCGACCAAGAGGTCCAAGAAAGCTGGCCGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 90 bp | TGTTGCAGGTGCAGGGAGACCAGGTTCGGCATGGTCCGAAACGAGTaGGCAGCCAGCACCGGGAAGTTGTTGCGCTGGAGATTGAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: CCRCRETRFGMVRNE*AASTGKLLRWRLSS Trigger: ACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAACTCGTTTCGGACCATGCCGAACCTGGTCTCCCTGCACCTGCAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 90 bp | AACCACCGCCGAAGGCCACGGAGCTGGCAGGTGCATTTCCATGGGTaGTTGGTGAGAGTGAGGGTCTCCAGGTTGTCAAAGGGGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: NHRRRPRSWQVHFHG*LVRVRVSRLSKGKE Trigger: CTCCTTCCCCTTTGACAACCTGGAGACCCTCACTCTCACCAACAACCCATGGAAATGCACCTGCCAGCTCCGTGGCCTTCGGCGGTGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS TCA 72 bp | TTGCAGCTGCGAAGGGCATCTGTGTCACGAATCCGCTaGCCCTTGAACTTGGCTGGCGAGGAGCAGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: LQLRRASVSRIR*PLNLAGEEQVA Trigger: TGCTACCTGCTCCTCGCCAGCCAAGTTCAAGGGTCAGCGGATTCGTGACACAGATGCCCTTCGCAGCTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS GCA 72 bp | GGGATCTTCTGCAGCCCCACCTTGTCGCAGATGACATaGTGCAGATCTCCATGGCAGTGGCAGTTTTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GIFCSPTLSQMT*CRSPWQWQFWG Trigger: CCCCCAAAACTGCCACTGCCATGGAGATCTGCAGCATGTCATCTGCGACAAGGTGGGGCTGCAGAAGATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CCA 72 bp | ATCTGTGTCACGAATCCGCTGACCCTTGAACTTGGCTaGCGAGGAGCAGGTAGCATCCGGTCGAGAAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: ICVTNPLTLELG*RGAGSIRSRSL Trigger: AAGGCTTCTCGACCGGATGCTACCTGCTCCTCGCCAGCCAAGTTCAAGGGTCAGCGGATTCGTGACACAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 72 bp | CGAAGGCCACGGAGCTGGCAGGTGCATTTCCATGGGTaGTTGGTGAGAGTGAGGGTCTCCAGGTTGTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: RRPRSWQVHFHG*LVRVRVSRLSK Trigger: CTTTGACAACCTGGAGACCCTCACTCTCACCAACAACCCATGGAAATGCACCTGCCAGCTCCGTGGCCTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 90 bp | TTGGCAGCCAGCACCGGGAAGTTGTTGCGCTGGAGATTGAGCAGTTaGGTTGTCTCTGATACCTTGGGGATCTTCTGCAGCCCCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: LAASTGKLLRWRLSS*VVSDTLGIFCSPTL Trigger: CAAGGTGGGGCTGCAGAAGATCCCCAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 90 bp | TTCGGCATGGTCCGAAACGAGTTGGCAGCCAGCACCGGGAAGTTGTaGCGCTGGAGATTGAGCAGTTTGGTTGTCTCTGATACCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FGMVRNELAASTGKL*RWRLSSLVVSDTLG Trigger: CCCCAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAACTCGTTTCGGACCATGCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS TCA 72 bp | CCTTGGGGATCTTCTGCAGCCCCACCTTGTCGCAGATaGCATGCTGCAGATCTCCATGGCAGTGGCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: PWGSSAAPPCRR*HAADLHGSGSF Trigger: AAAACTGCCACTGCCATGGAGATCTGCAGCATGTCATCTGCGACAAGGTGGGGCTGCAGAAGATCCCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CCA 72 bp | GAGGAAGGCAGTTGGTTCAGGCGGTTGTTGTCCAGATaGACGTGTTTCAGTGTGGTCACACCCGAGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: EEGSWFRRLLSR*TCFSVVTPEKA Trigger: TGCCTTCTCGGGTGTGACCACACTGAAACACGTCCATCTGGACAACAACCGCCTGAACCAACTGCCTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 72 bp | GTCTCTGATACCTTGGGGATCTTCTGCAGCCCCACCTaGTCGCAGATGACATGCTGCAGATCTCCATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: VSDTLGIFCSPT*SQMTCCRSPWQ Trigger: CTGCCATGGAGATCTGCAGCATGTCATCTGCGACAAGGTGGGGCTGCAGAAGATCCCCAAGGTATCAGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 90 bp | CGAAACGAGTTGGCAGCCAGCACCGGGAAGTTGTTGCGCTGGAGATaGAGCAGTTTGGTTGTCTCTGATACCTTGGGGATCTTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RNELAASTGKLLRWR*SSLVVSDTLGIFCS Trigger: GCTGCAGAAGATCCCCAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAACTCGTTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 90 bp | AGGTTCGGCATGGTCCGAAACGAGTTGGCAGCCAGCACCGGGAAGTaGTTGCGCTGGAGATTGAGCAGTTTGGTTGTCTCTGATACCTTG | + |
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Preference number: 6 (lower is better) Translates to: RFGMVRNELAASTGK*LRWRLSSLVVSDTL Trigger: CAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAACTCGTTTCGGACCATGCCGAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 90 bp | AGGTTGTCAAAGGGGAAGGAGGAAGGCAGTTGGTTCAGGCGGTTGTaGTCCAGATGGACGTGTTTCAGTGTGGTCACACCCGAGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RLSKGKEEGSWFRRL*SRWTCFSVVTPEKA Trigger: TGCCTTCTCGGGTGTGACCACACTGAAACACGTCCATCTGGACAACAACCGCCTGAACCAACTGCCTTCCTCCTTCCCCTTTGACAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 90 bp | TCCAGGTTGTCAAAGGGGAAGGAGGAAGGCAGTTGGTTCAGGCGGTaGTTGTCCAGATGGACGTGTTTCAGTGTGGTCACACCCGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SRLSKGKEEGSWFRR*LSRWTCFSVVTPEK Trigger: CTTCTCGGGTGTGACCACACTGAAACACGTCCATCTGGACAACAACCGCCTGAACCAACTGCCTTCCTCCTTCCCCTTTGACAACCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 90 bp | CAGGTGCATTTCCATGGGTTGTTGGTGAGAGTGAGGGTCTCCAGGTaGTCAAAGGGGAAGGAGGAAGGCAGTTGGTTCAGGCGGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: QVHFHGLLVRVRVSR*SKGKEEGSWFRRLL Trigger: CAACAACCGCCTGAACCAACTGCCTTCCTCCTTCCCCTTTGACAACCTGGAGACCCTCACTCTCACCAACAACCCATGGAAATGCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS TCA 72 bp | TGGCAGCCAGCACCGGGAAGTTGTTGCGCTGGAGATTaGGCAGTTTGGTTGTCTCTGATACCTTGGGGATCT | + |
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Preference number: 6 (lower is better) Translates to: WQPAPGSCCAGD*AVWLSLIPWGS Trigger: AGATCCCCAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CCA 72 bp | TCCAGCCAGAGGGTCTCCAGATATCTACCGAAGGACTaGAAGGCATTGTCTGGGATGCTCTTCAGAGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SSQRVSRYLPKD*KALSGMLFRGL Trigger: CAACCCTCTGAAGAGCATCCCAGACAATGCCTTCCAGTCCTTCGGTAGATATCTGGAGACCCTCTGGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 72 bp | CGCTGGAGATTGAGCAGTTTGGTTGTCTCTGATACCTaGGGGATCTTCTGCAGCCCCACCTTGTCGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: RWRLSSLVVSDT*GIFCSPTLSQM Trigger: CATCTGCGACAAGGTGGGGCTGCAGAAGATCCCCAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 72 bp | TTGGCAGCCAGCACCGGGAAGTTGTTGCGCTGGAGATaGAGCAGTTTGGTTGTCTCTGATACCTTGGGGATC | + |
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Preference number: 6 (lower is better) Translates to: LAASTGKLLRWR*SSLVVSDTLGI Trigger: GATCCCCAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 72 bp | GTCCGAAACGAGTTGGCAGCCAGCACCGGGAAGTTGTaGCGCTGGAGATTGAGCAGTTTGGTTGTCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: VRNELAASTGKL*RWRLSSLVVSD Trigger: ATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAACTCGTTTCGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 72 bp | ATGGTCCGAAACGAGTTGGCAGCCAGCACCGGGAAGTaGTTGCGCTGGAGATTGAGCAGTTTGGTTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: MVRNELAASTGK*LRWRLSSLVVS Trigger: AGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAACTCGTTTCGGACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 90 bp | TCCTTGGCCCCCTGGAAAGCTCCAGCACGCAGCTCTCGGATTTTGTaGTTGTTGAGTTGCAAGATGAAGAGGTTGACCAGAGGAGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: SLAPWKAPARSSRIL*LLSCKMKRLTRGES Trigger: GCTCTCTCCTCTGGTCAACCTCTTCATCTTGCAACTCAACAACAACAAAATCCGAGAGCTGCGTGCTGGAGCTTTCCAGGGGGCCAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 90 bp | AGGTCCTTGGCCCCCTGGAAAGCTCCAGCACGCAGCTCTCGGATTTaGTTGTTGTTGAGTTGCAAGATGAAGAGGTTGACCAGAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: RSLAPWKAPARSSRI*LLLSCKMKRLTRGE Trigger: CTCTCCTCTGGTCAACCTCTTCATCTTGCAACTCAACAACAACAAAATCCGAGAGCTGCGTGCTGGAGCTTTCCAGGGGGCCAAGGACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS TCA 72 bp | GTTGTTGCGCTGGAGATTGAGCAGTTTGGTTGTCTCTaGTACCTTGGGGATCTTCTGCAGCCCCACCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: VVALEIEQFGCL*YLGDLLQPHLV Trigger: GACAAGGTGGGGCTGCAGAAGATCCCCAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS TCA 72 bp | GTGTTTCAGTGTGGTCACACCCGAGAAGGCAGCATCTaGGAACTTCTCCAGGTTGGTGTTATCCAGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: VFQCGHTREGSI*ELLQVGVIQPE Trigger: CTCTGGCTGGATAACACCAACCTGGAGAAGTTCTCAGATGCTGCCTTCTCGGGTGTGACCACACTGAAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CCA 72 bp | AACGAGTTGGCAGCCAGCACCGGGAAGTTGTTGCGCTaGAGATTGAGCAGTTTGGTTGTCTCTGATACCTTG | + |
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Preference number: 6 (lower is better) Translates to: NELAASTGKLLR*RLSSLVVSDTL Trigger: CAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCTGGCTGCCAACTCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CCA 72 bp | TCAGGCGGTTGTTGTCCAGATGGACGTGTTTCAGTGTaGTCACACCCGAGAAGGCAGCATCTGAGAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: SGGCCPDGRVSV*SHPRRQHLRTS Trigger: AGAAGTTCTCAGATGCTGCCTTCTCGGGTGTGACCACACTGAAACACGTCCATCTGGACAACAACCGCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 72 bp | AGCACCGGGAAGTTGTTGCGCTGGAGATTGAGCAGTTaGGTTGTCTCTGATACCTTGGGGATCTTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: STGKLLRWRLSS*VVSDTLGIFCS Trigger: GCTGCAGAAGATCCCCAAGGTATCAGAGACAACCAAACTGCTCAATCTCCAGCGCAACAACTTCCCGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 90 bp | AGTTTGGTTGTCTCTGATACCTTGGGGATCTTCTGCAGCCCCACCTaGTCGCAGATGACATGCTGCAGATCTCCATGGCAGTGGCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLVVSDTLGIFCSPT*SQMTCCRSPWQWQF Trigger: AAACTGCCACTGCCATGGAGATCTGCAGCATGTCATCTGCGACAAGGTGGGGCTGCAGAAGATCCCCAAGGTATCAGAGACAACCAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS TCA 72 bp | GTTCCGACACTTTGTTGTGGTCTAGATAGAGGTAAGTaGGTTCAGTCAGGTCGTCGAAGGCTCCAGCTCGCA | + |
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Preference number: 6 (lower is better) Translates to: VPTLCCGLDRGK*VQSGRRRLQLA Trigger: TGCGAGCTGGAGCCTTCGACGACCTGACTGAACTCACTTACCTCTATCTAGACCACAACAAAGTGTCGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS GCA 72 bp | GATATCTACCGAAGGACTGGAAGGCATTGTCTGGGATaGTCTTCAGAGGGTTGTGAGACAGCTTCAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: DIYRRTGRHCLG*SSEGCETASAP Trigger: AGGAGCTGAAGCTGTCTCACAACCCTCTGAAGAGCATCCCAGACAATGCCTTCCAGTCCTTCGGTAGATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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| CDS CAA 72 bp | AAAGCTCCAGCACGCAGCTCTCGGATTTTGTTGTTGTaGAGTTGCAAGATGAAGAGGTTGACCAGAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: KAPARSSRILLL*SCKMKRLTRGE Trigger: CTCTCCTCTGGTCAACCTCTTCATCTTGCAACTCAACAACAACAAAATCCGAGAGCTGCGTGCTGGAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040418.9 |
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