Pregenerated sensors for CHAC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020309Ensembl transcript IDs: ENSMUST00000020553.5, ENSMUST00000101394.5
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTTTCCCATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTGCAAAGACATCTCTTGCCTCTTTGGGTaGGTTGGTGACTCTGTATGC | + |
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Preference number: 2 (lower is better) Translates to: LSHCENLLDMFQDTCKDISCLFG*VGDSVC Trigger: GCATACAGAGTCACCAACGCACCCAAAGAGGCAAGA...GATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| 3UTR-3UTR GCA 90 bp | CTGTTGGATATGTTTCAGGACACTTGCAAAGACATCGTAAATCTAGATGATATTTCTTGCCTCTTTGGGTaGGTTGGTGACTCTGTATGC | + |
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Preference number: 2 (lower is better) Translates to: LLDMFQDTCKDIVNLDDISCLFG*VGDSVC Trigger: GCATACAGAGTCACCAACGCACCCAAAGAGGCAAGA...AATATCATCTAGATTTACGATGTCTTTGCAAGTGTCCTGAAACATATCCAACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| 3UTR TCA 72 bp | GGAAATCACTTTTACAACGTGAACTCTTTCCCATTGTaGGAATCTGTTGGATATGTTTCAGGACACTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: GNHFYNVNSFPL*ESVGYVSGHLQ Trigger: TTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAGAGTTCACGTTGTAAAAGTGATTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| 3UTR GCA 72 bp | CATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTaGAAAGACATCGTAAATCTAGATGATATTCCAATT | + |
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Preference number: 3 (lower is better) Translates to: HCENLLDMFQDT*KDIVNLDDIPI Trigger: AATTGGAATATCATCTAGATTTACGATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR GCA 90 bp | CTTTCCCATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTGCAAAGACATCCCCCGCGGTGGTCCGTaGTACCTTGCCAGAAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LSHCENLLDMFQDTCKDIPRGGP*YLARSA Trigger: GGCGCTTCTGGCAAGGTAGCACGGACCACCGCGGGG...GATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR CCA 90 bp | CTTTCCCATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTGCAAAGACATCCCTGGGACCCCGCGGTaGTCCGTGCTACCTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSHCENLLDMFQDTCKDIPGTPR*SVLPCQ Trigger: CTGGCAAGGTAGCACGGACCACCGCGGGGTCCCAGG...GATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR CCA 90 bp | CTTTCCCATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTGCAAAGACATCTACACTGCCCTTGCCTaGGACCCCGCGGTGGTCCGT | + |
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Preference number: 4 (lower is better) Translates to: LSHCENLLDMFQDTCKDIYTALA*DPAVVR Trigger: ACGGACCACCGCGGGGTCCCAGGCAAGGGCAGTGTA...GATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020553.5 |
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| CDS-3UTR CCA 90 bp | CTTTCCCATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTGCAAAGACATCTCTTCCAGGCTTGCCTaGGACCCCGCGGTGGTCCGT | + |
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Preference number: 4 (lower is better) Translates to: LSHCENLLDMFQDTCKDISSRLA*DPAVVR Trigger: ACGGACCACCGCGGGGTCCCAGGCAAGCCTGGAAGA...GATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101394.5 |
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| CDS-3UTR GCA 90 bp | CTGTTGGATATGTTTCAGGACACTTGCAAAGACATCGTAAATCTAGATGATATTCCCCGCGGTGGTCCGTaGTACCTTGCCAGAAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LLDMFQDTCKDIVNLDDIPRGGP*YLARSA Trigger: GGCGCTTCTGGCAAGGTAGCACGGACCACCGCGGGG...AATATCATCTAGATTTACGATGTCTTTGCAAGTGTCCTGAAACATATCCAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR GCA 90 bp | CTGTTGGATATGTTTCAGGACACTTGCAAAGACATCGTAAATCTAGATGATATTCCCATACACTGCCCTTaGCTGGGACCCCGCGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LLDMFQDTCKDIVNLDDIPIHCP*LGPRGG Trigger: ACCACCGCGGGGTCCCAGGCAAGGGCAGTGTATGGG...AATATCATCTAGATTTACGATGTCTTTGCAAGTGTCCTGAAACATATCCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020553.5 |
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| CDS-3UTR TCA 90 bp | CTTTCCCATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTGCAAAGACATCAGTCCACCTTCCAGATaGGGGACCCATAACCAAACA | + |
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Preference number: 4 (lower is better) Translates to: LSHCENLLDMFQDTCKDISPPSR*GTHNQT Trigger: TGTTTGGTTATGGGTCCCTCATCTGGAAGGTGGACT...GATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR GCA 90 bp | CTTTCCCATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTGCAAAGACATCAATATCTTCCAGAGGTaGAGGGCCAAGATAGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: LSHCENLLDMFQDTCKDINIFQR*RAKIVR Trigger: CCTAACTATCTTGGCCCTGCACCTCTGGAAGATATT...GATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR GCA 90 bp | CTTTCCCATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTGCAAAGACATCTCCAAAGAGAAGAGATaGTCGTCTGCATCTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LSHCENLLDMFQDTCKDISKEKR*SSASSG Trigger: ACCAGAAGATGCAGACGAGCATCTCTTCTCTTTGGA...GATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR TCA 90 bp | CTTTCCCATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTGCAAAGACATCTGTAGAGCAAAACACTaGATGGTTTTGTTGTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LSHCENLLDMFQDTCKDICRAKH*MVLLWN Trigger: ATTCCACAACAAAACCATTCAGTGTTTTGCTCTACA...GATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR GCA 90 bp | CTGTTGGATATGTTTCAGGACACTTGCAAAGACATCGTAAATCTAGATGATATTAATATCTTCCAGAGGTaGAGGGCCAAGATAGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: LLDMFQDTCKDIVNLDDINIFQR*RAKIVR Trigger: CCTAACTATCTTGGCCCTGCACCTCTGGAAGATATT...AATATCATCTAGATTTACGATGTCTTTGCAAGTGTCCTGAAACATATCCAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR GCA 90 bp | CTGTTGGATATGTTTCAGGACACTTGCAAAGACATCGTAAATCTAGATGATATTGAAGAGATGCTCGTCTaGATCTTCTGGTACAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LLDMFQDTCKDIVNLDDIEEMLV*IFWYKF Trigger: AAACTTGTACCAGAAGATGCAGACGAGCATCTCTTC...AATATCATCTAGATTTACGATGTCTTTGCAAGTGTCCTGAAACATATCCAACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR CCA 90 bp | CTTTCCCATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTGCAAAGACATCTGTATTTCTTCCACTTaGACCAGCTGCATTAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: LSHCENLLDMFQDTCKDICISST*TSCIKN Trigger: ATTTTTAATGCAGCTGGTCCAAGTGGAAGAAATACA...GATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR TCA 90 bp | CTGTTGGATATGTTTCAGGACACTTGCAAAGACATCGTAAATCTAGATGATATTAGCCTCCTTTCTCTCTaGAGTCAAGGTATGTTTTTA | + |
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Preference number: 4 (lower is better) Translates to: LLDMFQDTCKDIVNLDDISLLSL*SQGMFL Trigger: TAAAAACATACCTTGACTTCAGAGAGAAAGGAGGCT...AATATCATCTAGATTTACGATGTCTTTGCAAGTGTCCTGAAACATATCCAACAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR TCA 90 bp | CTGTTGGATATGTTTCAGGACACTTGCAAAGACATCGTAAATCTAGATGATATTTGTAGAGCAAAACACTaGATGGTTTTGTTGTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LLDMFQDTCKDIVNLDDICRAKH*MVLLWN Trigger: ATTCCACAACAAAACCATTCAGTGTTTTGCTCTACA...AATATCATCTAGATTTACGATGTCTTTGCAAGTGTCCTGAAACATATCCAACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR CCA 90 bp | CTGTTGGATATGTTTCAGGACACTTGCAAAGACATCGTAAATCTAGATGATATTTGTATTTCTTCCACTTaGACCAGCTGCATTAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: LLDMFQDTCKDIVNLDDICISST*TSCIKN Trigger: ATTTTTAATGCAGCTGGTCCAAGTGGAAGAAATACA...AATATCATCTAGATTTACGATGTCTTTGCAAGTGTCCTGAAACATATCCAACAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS TCA 90 bp | CGCGGTGGTCCGTGCTACCTTGCCAGAAGCGCCGACTGTAGTTTGTaGTGTAACCAACCAGCTTGTCCTGGTAGGGGAAGTCCACCTTCC | + |
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Preference number: 5 (lower is better) Translates to: RGGPCYLARSADCSL*CNQPACPGRGSPPS Trigger: GGAAGGTGGACTTCCCCTACCAGGACAAGCTGGTTGGTTACATCACAAACTACAGTCGGCGCTTCTGGCAAGGTAGCACGGACCACCGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR CAA 90 bp | CTTTCCCATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTGCAAAGACATCCCCCATACACTGCCCTaGCCTGGGACCCCGCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LSHCENLLDMFQDTCKDIPHTLP*PGTPRW Trigger: CCACCGCGGGGTCCCAGGCAAGGGCAGTGTATGGGG...GATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020553.5 |
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| CDS-3UTR CAA 90 bp | CTTTCCCATTGTGAGAATCTGTTGGATATGTTTCAGGACACTTGCAAAGACATCGTGGTCCGTGCTACCTaGCCAGAAGCGCCGACTGTA | + |
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Preference number: 5 (lower is better) Translates to: LSHCENLLDMFQDTCKDIVVRAT*PEAPTV Trigger: TACAGTCGGCGCTTCTGGCAAGGTAGCACGGACCAC...GATGTCTTTGCAAGTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS-3UTR CAA 90 bp | CTGTTGGATATGTTTCAGGACACTTGCAAAGACATCGTAAATCTAGATGATATTACAACTCTTCCAGGCTaGCCTGGGACCCCGCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LLDMFQDTCKDIVNLDDITTLPG*PGTPRW Trigger: CCACCGCGGGGTCCCAGGCAAGCCTGGAAGAGTTGT...AATATCATCTAGATTTACGATGTCTTTGCAAGTGTCCTGAAACATATCCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101394.5 |
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| CDS GCA 90 bp | TGGACCAGCTGCATTAAAAATTTGTTCAGCAATATCTTCCAGAGGTaGAGGGCCAAGATAGTTAGGATTATCACATGTTCCAATGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: WTSCIKNLFSNIFQR*RAKIVRIITCSNVE Trigger: CTCTACATTGGAACATGTGATAATCCTAACTATCTTGGCCCTGCACCTCTGGAAGATATTGCTGAACAAATTTTTAATGCAGCTGGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS GCA 90 bp | TGCAAGTTCAAAAAGATATTCTGTATTTCTTCCACTTGGACCAGCTaGATTAAAAATTTGTTCAGCAATATCTTCCAGAGGTGCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: CKFKKIFCISSTWTS*IKNLFSNIFQRCRA Trigger: GGCCCTGCACCTCTGGAAGATATTGCTGAACAAATTTTTAATGCAGCTGGTCCAAGTGGAAGAAATACAGAATATCTTTTTGAACTTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS CAA 72 bp | GCCCTTGCCTGGGACCCCGCGGTGGTCCGTGCTACCTaGCCAGAAGCGCCGACTGTAGTTTGTGATGTAACC | + |
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Preference number: 6 (lower is better) Translates to: ALAWDPAVVRAT*PEAPTVVCDVT Trigger: GGTTACATCACAAACTACAGTCGGCGCTTCTGGCAAGGTAGCACGGACCACCGCGGGGTCCCAGGCAAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020553.5 |
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| CDS CAA 72 bp | AGGCTTGCCTGGGACCCCGCGGTGGTCCGTGCTACCTaGCCAGAAGCGCCGACTGTAGTTTGTGATGTAACC | + |
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Preference number: 6 (lower is better) Translates to: RLAWDPAVVRAT*PEAPTVVCDVT Trigger: GGTTACATCACAAACTACAGTCGGCGCTTCTGGCAAGGTAGCACGGACCACCGCGGGGTCCCAGGCAAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101394.5 |
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| CDS CAA 90 bp | CCATACACTGCCCTTGCCTGGGACCCCGCGGTGGTCCGTGCTACCTaGCCAGAAGCGCCGACTGTAGTTTGTGATGTAACCAACCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: PYTALAWDPAVVRAT*PEAPTVVCDVTNQL Trigger: AAGCTGGTTGGTTACATCACAAACTACAGTCGGCGCTTCTGGCAAGGTAGCACGGACCACCGCGGGGTCCCAGGCAAGGGCAGTGTATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020553.5 |
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| CDS CAA 90 bp | AACTCTTCCAGGCTTGCCTGGGACCCCGCGGTGGTCCGTGCTACCTaGCCAGAAGCGCCGACTGTAGTTTGTGATGTAACCAACCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: NSSRLAWDPAVVRAT*PEAPTVVCDVTNQL Trigger: AAGCTGGTTGGTTACATCACAAACTACAGTCGGCGCTTCTGGCAAGGTAGCACGGACCACCGCGGGGTCCCAGGCAAGCCTGGAAGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101394.5 |
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| CDS TCA 72 bp | CCGTGCTACCTTGCCAGAAGCGCCGACTGTAGTTTGTaGTGTAACCAACCAGCTTGTCCTGGTAGGGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: PCYLARSADCSL*CNQPACPGRGS Trigger: ACTTCCCCTACCAGGACAAGCTGGTTGGTTACATCACAAACTACAGTCGGCGCTTCTGGCAAGGTAGCACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS CAA 90 bp | AAGATATTCTGTATTTCTTCCACTTGGACCAGCTGCATTAAAAATTaGTTCAGCAATATCTTCCAGAGGTGCAGGGCCAAGATAGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: KIFCISSTWTSCIKN*FSNIFQRCRAKIVR Trigger: CCTAACTATCTTGGCCCTGCACCTCTGGAAGATATTGCTGAACAAATTTTTAATGCAGCTGGTCCAAGTGGAAGAAATACAGAATATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS GCA 72 bp | TGCATTAAAAATTTGTTCAGCAATATCTTCCAGAGGTaGAGGGCCAAGATAGTTAGGATTATCACATGTTCC | + |
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Preference number: 6 (lower is better) Translates to: CIKNLFSNIFQR*RAKIVRIITCS Trigger: GGAACATGTGATAATCCTAACTATCTTGGCCCTGCACCTCTGGAAGATATTGCTGAACAAATTTTTAATGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS CCA 72 bp | TTTTTCCAAAGAGAAGAGATGCTCGTCTGCATCTTCTaGTACAAGTTTCCTAACAGAATCTGCAAGTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FFQREEMLVCIF*YKFPNRICKFK Trigger: TTTGAACTTGCAGATTCTGTTAGGAAACTTGTACCAGAAGATGCAGACGAGCATCTCTTCTCTTTGGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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| CDS GCA 72 bp | AAAAAGATATTCTGTATTTCTTCCACTTGGACCAGCTaGATTAAAAATTTGTTCAGCAATATCTTCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: KKIFCISSTWTS*IKNLFSNIFQR Trigger: CCTCTGGAAGATATTGCTGAACAAATTTTTAATGCAGCTGGTCCAAGTGGAAGAAATACAGAATATCTTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020553.5 ENSMUST00000101394.5 |
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