RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CGNL1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032232

Ensembl transcript IDs: ENSMUST00000072899.9, ENSMUST00000121322.8, ENSMUST00000122065.2

Found 495 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCTCCAATTCCAGGCCTGAGCGAGCTTCGCTTGGAGGTCTGCCATaGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCT +
Preference number: 1 (lower is better)
Translates to: SSNSRPERASLGGLP*RKRAKETQQQRSCP
Trigger: AGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGGCAGACCTCCAAGCGAAGCTCGCTCAGGCCTGGAATTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 90 bp GCCAGGAGATATGCAGGGATGCCCAGCATCCTCCCAAAACTACCTTaGCATCATGTGCTTGCCCTTGGACCTCACCCCTTCCTGACACCT +
Preference number: 1 (lower is better)
Translates to: ARRYAGMPSILPKLP*HHVLALGPHPFLTP
Trigger: AGGTGTCAGGAAGGGGTGAGGTCCAAGGGCAAGCACATGATGCCAAGGTAGTTTTGGGAGGATGCTGGGCATCCCTGCATATCTCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 90 bp CATGCCCTCATCTCGTTTAGCCTCCTCTGGTGTGTGTGTGTGTGGTaGGGTGAGGGACTCTACAAGTGTTTCCAGTGGTGGCCTCTGCTC +
Preference number: 1 (lower is better)
Translates to: HALISFSLLWCVCVW*GEGLYKCFQWWPLL
Trigger: GAGCAGAGGCCACCACTGGAAACACTTGTAGAGTCCCTCACCCCACCACACACACACACACCAGAGGAGGCTAAACGAGATGAGGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR GCA 90 bp CCTATTCCTCCAATTCCAGGCCTGAGCGAGCTTCGCTTGGAGGTCTaGCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTT +
Preference number: 1 (lower is better)
Translates to: PIPPIPGLSELRLEV*HGGKGPRRHNNSAL
Trigger: AAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGGCAGACCTCCAAGCGAAGCTCGCTCAGGCCTGGAATTGGAGGAATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 90 bp AGACATGCCCTCATCTCGTTTAGCCTCCTCTGGTGTGTGTGTGTGTaGTGGGGTGAGGGACTCTACAAGTGTTTCCAGTGGTGGCCTCTG +
Preference number: 1 (lower is better)
Translates to: RHALISFSLLWCVCV*WGEGLYKCFQWWPL
Trigger: CAGAGGCCACCACTGGAAACACTTGTAGAGTCCCTCACCCCACCACACACACACACACCAGAGGAGGCTAAACGAGATGAGGGCATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR TCA 90 bp AACTACCTTGGCATCATGTGCTTGCCCTTGGACCTCACCCCTTCCTaGCACCTGTTCCCAAAAACAGCCCTTCAGATGGCAAGCACTCCC +
Preference number: 1 (lower is better)
Translates to: NYLGIMCLPLDLTPS*HLFPKTALQMASTP
Trigger: GGGAGTGCTTGCCATCTGAAGGGCTGTTTTTGGGAACAGGTGTCAGGAAGGGGTGAGGTCCAAGGGCAAGCACATGATGCCAAGGTAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 90 bp GTGTGTGTGTGGTGGGGTGAGGGACTCTACAAGTGTTTCCAGTGGTaGCCTCTGCTCTCCCTTCCACGAGCTATCTTCCTTCATATAGTT +
Preference number: 1 (lower is better)
Translates to: VCVWWGEGLYKCFQW*PLLSLPRAIFLHIV
Trigger: AACTATATGAAGGAAGATAGCTCGTGGAAGGGAGAGCAGAGGCCACCACTGGAAACACTTGTAGAGTCCCTCACCCCACCACACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR GCA 90 bp TCTGTCTCCCATTCTGCTTGCTTGAAAGCAGTGGGGAGTAGGGACTaGTCTTTGCATGGTTCAGATAAAATAAGCAACCAAGGCCTCAGA +
Preference number: 1 (lower is better)
Translates to: SVSHSACLKAVGSRD*SLHGSDKISNQGLR
Trigger: TCTGAGGCCTTGGTTGCTTATTTTATCTGAACCATGCAAAGAGCAGTCCCTACTCCCCACTGCTTTCAAGCAAGCAGAATGGGAGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR TCA 90 bp AATGAGCTGGTTTCCCATACAAACCAATTATTGATTCCCACTGTCTaGCCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTG +
Preference number: 1 (lower is better)
Translates to: NELVSHTNQLLIPTV*PPLVSRIAFTLPPL
Trigger: CAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTGGGAATCAATAATTGGTTTGTATGGGAAACCAGCTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR TCA 90 bp GTTAAATACAGGGCTTCCTGCACGCTAGGCACGCATTGCCCCAGCTaGGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACTGTGT +
Preference number: 1 (lower is better)
Translates to: VKYRASCTLGTHCPS*ATFPAQHFYFYLLC
Trigger: ACACAGTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCGTGCCTAGCGTGCAGGAAGCCCTGTATTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR GCA 90 bp GAAGCACAGCACTTGTTAAAAATCTCATCTGTCTCCCATTCTGCTTaGTTGAAAGCAGTGGGGAGTAGGGACTGCTCTTTGCATGGTTCA +
Preference number: 1 (lower is better)
Translates to: EAQHLLKISSVSHSA*LKAVGSRDCSLHGS
Trigger: TGAACCATGCAAAGAGCAGTCCCTACTCCCCACTGCTTTCAAGCAAGCAGAATGGGAGACAGATGAGATTTTTAACAAGTGCTGTGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR TCA 90 bp ATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTaGGAAGGTCTGGTTCAGTCTATACATCATTTCATCCCTATGTGT +
Preference number: 1 (lower is better)
Translates to: ILERLWSILKENSGP*EGLVQSIHHFIPMC
Trigger: ACACATAGGGATGAAATGATGTATAGACTGAACCAGACCTTCTCAAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CAA 90 bp GGCCAGGAGATATGCAGGGATGCCCAGCATCCTCCCAAAACTACCTaGGCATCATGTGCTTGCCCTTGGACCTCACCCCTTCCTGACACC +
Preference number: 2 (lower is better)
Translates to: GQEICRDAQHPPKTT*ASCACPWTSPLPDT
Trigger: GGTGTCAGGAAGGGGTGAGGTCCAAGGGCAAGCACATGATGCCAAGGTAGTTTTGGGAGGATGCTGGGCATCCCTGCATATCTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CAA 90 bp AAGGCCCCTCCTATTCCTCCAATTCCAGGCCTGAGCGAGCTTCGCTaGGAGGTCTGCCATGGAGGAAAAGGGCCAAGGAGACACAACAAC +
Preference number: 2 (lower is better)
Translates to: KAPPIPPIPGLSELR*EVCHGGKGPRRHNN
Trigger: GTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGGCAGACCTCCAAGCGAAGCTCGCTCAGGCCTGGAATTGGAGGAATAGGAGGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCGCCCCAGGAGGAATGTaGGGTGGTAACCGTGGGTCT +
Preference number: 2 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSAPGGM*GGNRGS
Trigger: AGACCCACGGTTACCACCTCACATTCCTCCTGGGGC...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCATCAACCCCCACCCCCTaGCCTTCTTGCACATCCCCC +
Preference number: 2 (lower is better)
Translates to: KADFELWILLLPLPVLGSSTPTP*PSCTSP
Trigger: GGGGGATGTGCAAGAAGGGCAGGGGGTGGGGGTTGA...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACACCCATTCTGCTTGCTTaGAAGCAGTGGGGAGTAGGG +
Preference number: 2 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTPILLA*KQWGVG
Trigger: CCCTACTCCCCACTGCTTTCAAGCAAGCAGAATGGG...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACACTTCGCTTGGAGGTCTaGCATGGAGGAAAAGGGCCA +
Preference number: 2 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTLRLEV*HGGKGP
Trigger: TGGCCCTTTTCCTCCATGGCAGACCTCCAAGCGAAG...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACTCAACCCCCACCCCCTaGCCTTCTTGCACATCCCCC +
Preference number: 2 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNSTPTP*PSCTSP
Trigger: GGGGGATGTGCAAGAAGGGCAGGGGGTGGGGGTTGA...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CAA 90 bp TGTGTTGGGATCACAGGCATACCACACCACACCCGGTTTATAGAGTaGGGGGTTAAATACAGGGCTTCCTGCACGCTAGGCACGCATTGC +
Preference number: 2 (lower is better)
Translates to: CVGITGIPHHTRFIE*GVKYRASCTLGTHC
Trigger: GCAATGCGTGCCTAGCGTGCAGGAAGCCCTGTATTTAACCCCCAACTCTATAAACCGGGTGTGGTGTGGTATGCCTGTGATCCCAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACGCCCCAGGAGGAATGTaGGGTGGTAACCGTGGGTCT +
Preference number: 2 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNAPGGM*GGNRGS
Trigger: AGACCCACGGTTACCACCTCACATTCCTCCTGGGGC...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACATTGATTCCCACTGTCTaGCCCCCTCTGGTTTCCAGA +
Preference number: 2 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTLIPTV*PPLVSR
Trigger: TCTGGAAACCAGAGGGGGTCAGACAGTGGGAATCAA...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACAGACCTCACCCCTTCCTaGCACCTGTTCCCAAAAACA +
Preference number: 2 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTDLTPS*HLFPKT
Trigger: TGTTTTTGGGAACAGGTGTCAGGAAGGGGTGAGGTC...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGACCTACTCTGTCTAGATaGCTGCAGAGTCCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGPTLSR*LQSPVR
Trigger: CCTGACAGGACTCTGCAGTCATCTAGACAGAGTAGG...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTGGGCAGGAGAAGGAGTaGTGGCAGACAGCAGTGCAC +
Preference number: 2 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSGQEKE*WQTAVH
Trigger: GTGCACTGCTGTCTGCCATCACTCCTTCTCCTGCCC...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCTTGATTCCCACTGTCTaGCCCCCTCTGGTTTCCAGA +
Preference number: 2 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSLIPTV*PPLVSR
Trigger: TCTGGAAACCAGAGGGGGTCAGACAGTGGGAATCAA...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCGATGGCAGACAGCAGTaGACAATGGGGCTTTGTCTT +
Preference number: 2 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSDGRQQ*TMGLCL
Trigger: AAGACAAAGCCCCATTGTGCACTGCTGTCTGCCATC...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGAGATGGCAGACAGCAGTaGACAATGGGGCTTTGTCTT +
Preference number: 2 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGDGRQQ*TMGLCL
Trigger: AAGACAAAGCCCCATTGTGCACTGCTGTCTGCCATC...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGAGTGGGGAGTAGGGACTaGTCTTTGCATGGTTCAGAT +
Preference number: 2 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGVGSRD*SLHGSD
Trigger: ATCTGAACCATGCAAAGAGCAGTCCCTACTCCCCAC...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACACCCCCTGCCCTTCTTaGACATCCCCCAGCTTTCAA +
Preference number: 2 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDTPCPS*TSPSFQ
Trigger: TTGAAAGCTGGGGGATGTGCAAGAAGGGCAGGGGGT...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACACCCCCTGCCCTTCTTaGACATCCCCCAGCTTTCAA +
Preference number: 2 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNTPCPS*TSPSFQ
Trigger: TTGAAAGCTGGGGGATGTGCAAGAAGGGCAGGGGGT...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACGTAGGCCAGGAGATATaGAGGGATGCCCAGCATCCT +
Preference number: 2 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDVGQEI*RDAQHP
Trigger: AGGATGCTGGGCATCCCTGCATATCTCCTGGCCTAC...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGCAGTGCCCAAGTCTGTaGCTGACACATTTTGATGGA +
Preference number: 2 (lower is better)
Translates to: GASYITQLGQDLHMYPRLQCPSL*LTHFDG
Trigger: TCCATCAAAATGTGTCAGGCACAGACTTGGGCACTG...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACACTATATCATTACAGCTaGCACTGGAACCTTCTCCGG +
Preference number: 2 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTLYHYS*HWNLLR
Trigger: CCGGAGAAGGTTCCAGTGCCAGCTGTAATGATATAG...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CAA 90 bp TCCCATTCTGCTTGCTTGAAAGCAGTGGGGAGTAGGGACTGCTCTTaGCATGGTTCAGATAAAATAAGCAACCAAGGCCTCAGACTCCGC +
Preference number: 2 (lower is better)
Translates to: SHSACLKAVGSRDCS*HGSDKISNQGLRLR
Trigger: GCGGAGTCTGAGGCCTTGGTTGCTTATTTTATCTGAACCATGCAAAGAGCAGTCCCTACTCCCCACTGCTTTCAAGCAAGCAGAATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CAA 90 bp ATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGACTTaGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCAC +
Preference number: 2 (lower is better)
Translates to: ITQLGQDLHMYPRLT*NSGSSCCHFLCWDH
Trigger: GTGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGTTCCCCAACCATCAATaGGCTGGTTTCCCATACAAA +
Preference number: 2 (lower is better)
Translates to: GASYITQLGQDLHMYPRLFPNHQ*AGFPYK
Trigger: TTTGTATGGGAAACCAGCTCATTGATGGTTGGGGAA...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTCCCATTCTGCTTGCTTaGAAGCAGTGGGGAGTAGGG +
Preference number: 2 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSPILLA*KQWGVG
Trigger: CCCTACTCCCCACTGCTTTCAAGCAAGCAGAATGGG...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCCTTCGCTTGGAGGTCTaGCATGGAGGAAAAGGGCCA +
Preference number: 2 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPLRLEV*HGGKGP
Trigger: TGGCCCTTTTCCTCCATGGCAGACCTCCAAGCGAAG...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACTACCTTGGCATCATGTaGTTGCCCTTGGACCTCACC +
Preference number: 2 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNYLGIM*LPLDLT
Trigger: GGTGAGGTCCAAGGGCAAGCACATGATGCCAAGGTA...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTTCATGTGCTTGCCCTTaGACCTCACCCCTTCCTGAC +
Preference number: 2 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSSCACP*TSPLPD
Trigger: GTCAGGAAGGGGTGAGGTCCAAGGGCAAGCACATGA...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACGTCTCCCATTCTGCTTaGTTGAAAGCAGTGGGGAGT +
Preference number: 2 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNVSHSA*LKAVGS
Trigger: ACTCCCCACTGCTTTCAAGCAAGCAGAATGGGAGAC...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTTACCTTGGCATCATGTaGTTGCCCTTGGACCTCACC +
Preference number: 2 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSYLGIM*LPLDLT
Trigger: GGTGAGGTCCAAGGGCAAGCACATGATGCCAAGGTA...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAAGTAGGCCAGGAGATATaGAGGGATGCCCAGCATCCT +
Preference number: 2 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKVGQEI*RDAQHP
Trigger: AGGATGCTGGGCATCCCTGCATATCTCCTGGCCTAC...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAACCTACTCTGTCTAGATaGCTGCAGAGTCCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKPTLSR*LQSPVR
Trigger: CCTGACAGGACTCTGCAGTCATCTAGACAGAGTAGG...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACGACCTCACCCCTTCCTaGCACCTGTTCCCAAAAACA +
Preference number: 2 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYDLTPS*HLFPKT
Trigger: TGTTTTTGGGAACAGGTGTCAGGAAGGGGTGAGGTC...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACTTACTGTGTTTCCAGTaGCCAAGTCTGTGCCTGACA +
Preference number: 2 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNLLCFQ*PSLCLT
Trigger: TGTCAGGCACAGACTTGGGCACTGGAAACACAGTAA...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACCTATATCATTACAGCTaGCACTGGAACCTTCTCCGG +
Preference number: 2 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDLYHYS*HWNLLR
Trigger: CCGGAGAAGGTTCCAGTGCCAGCTGTAATGATATAG...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACTTCCCCAACCATCAATaGGCTGGTTTCCCATACAAA +
Preference number: 2 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNFPNHQ*AGFPYK
Trigger: TTTGTATGGGAAACCAGCTCATTGATGGTTGGGGAA...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAACTGAATCTAGCTGTGTaGACTCTGACCTGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKLNLAV*TLTCCG
Trigger: TCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAG...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCCTCTGTCTAGATGACTaGAGAGTCCTGTCAGGATCA +
Preference number: 2 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPLCLDD*RVLSGS
Trigger: TGATCCTGACAGGACTCTGCAGTCATCTAGACAGAG...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAAAGTCATGAGGAGACATaGGTAGGCCAGGAGATATGC +
Preference number: 2 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKSHEET*VGQEIC
Trigger: GCATATCTCCTGGCCTACCCATGTCTCCTCATGACT...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCTCACTCTCCCTCCTTTaGCTCCAGCTTCTTAATACT +
Preference number: 2 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPSLSLL*LQLLNT
Trigger: AGTATTAAGAAGCTGGAGGCAAAGGAGGGAGAGTGA...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAAATCTGTCTCCCATTCTaGTTGCTTGAAAGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKICLPF*LLESSG
Trigger: CCCACTGCTTTCAAGCAAGCAGAATGGGAGACAGAT...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAACAGTGCCCAAGTCTGTaGCTGACACATTTTGATGGA +
Preference number: 2 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKQCPSL*LTHFDG
Trigger: TCCATCAAAATGTGTCAGGCACAGACTTGGGCACTG...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACATGTGTAATAGGGCTTaGTTCTCTGGCAGCAGATGC +
Preference number: 2 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYMCNRA*FSGSRC
Trigger: GCATCTGCTGCCAGAGAACCAAGCCCTATTACACAT...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAACCATATCAGGAAGCCTaGGGACTCTGCTCCAGTGTC +
Preference number: 2 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKPYQEA*GLCSSV
Trigger: GACACTGGAGCAGAGTCCTCAGGCTTCCTGATATGG...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACGTCCTTGAGAAGGTCTaGTTCAGTCTATACATCATT +
Preference number: 2 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDVLEKV*FSLYII
Trigger: AATGATGTATAGACTGAACCAGACCTTCTCAAGGAC...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACCAACCATCAATGAGCTaGTTTCCCATACAAACCAAT +
Preference number: 2 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNQPSMS*FPIQTN
Trigger: ATTGGTTTGTATGGGAAACCAGCTCATTGATGGTTG...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAATCATGTGCTTGCCCTTaGACCTCACCCCTTCCTGAC +
Preference number: 2 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKSCACP*TSPLPD
Trigger: GTCAGGAAGGGGTGAGGTCCAAGGGCAAGCACATGA...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTGTCCTTGAGAAGGTCTaGTTCAGTCTATACATCATT +
Preference number: 2 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSVLEKV*FSLYII
Trigger: AATGATGTATAGACTGAACCAGACCTTCTCAAGGAC...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAATGCATCACACTCTCCTaGATGGTTACAGGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKCITLS*MVTGGQ
Trigger: CTGCCCTCCTGTAACCATCCAGGAGAGTGTGATGCA...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAACTGAATCTAGCTGTGTaGACTCTGACCTGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKLNLAV*TLTCCG
Trigger: TCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAG...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAATCAACAGATTCGAGCTaGGAAGGACCTGGAGTCCTA +
Preference number: 2 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKSTDSS*EGPGVL
Trigger: TAGGACTCCAGGTCCTTCTCAGCTCGAATCTGTTGA...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR GCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAACTCTGTCTAGATGACTaGAGAGTCCTGTCAGGATCA +
Preference number: 2 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKLCLDD*RVLSGS
Trigger: TGATCCTGACAGGACTCTGCAGTCATCTAGACAGAG...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR TCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAAACATGGAAGAATGGCTaGAAGCAGAAGTCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKTWKNG*KQKSLH
Trigger: ATGGAGAGACTTCTGCTTTCAGCCATTCTTCCATGT...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp TCCAGGCCTGAGCGAGCTTCGCTTGGAGGTCTGCCATaGAGGAAAAGGGCCAAGGAGACACAACAACAGCGC +
Preference number: 3 (lower is better)
Translates to: SRPERASLGGLP*RKRAKETQQQR
Trigger: GCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGGCAGACCTCCAAGCGAAGCTCGCTCAGGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR GCA 72 bp CCAATTCCAGGCCTGAGCGAGCTTCGCTTGGAGGTCTaGCATGGAGGAAAAGGGCCAAGGAGACACAACAAC +
Preference number: 3 (lower is better)
Translates to: PIPGLSELRLEV*HGGKGPRRHNN
Trigger: GTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGGCAGACCTCCAAGCGAAGCTCGCTCAGGCCTGGAATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR GCA 72 bp CGTCACTCACTGACTATACTGCACACACCGGCTCGCTaGCCACTCCATTACAGCACAGGAGACATGCCCTCA +
Preference number: 3 (lower is better)
Translates to: RHSLTILHTPAR*PLHYSTGDMPS
Trigger: TGAGGGCATGTCTCCTGTGCTGTAATGGAGTGGGCAGCGAGCCGGTGTGTGCAGTATAGTCAGTGAGTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR GCA 72 bp CAGCATCCTCCCAAAACTACCTTGGCATCATGTGCTTaGCCTTGGACCTCACCCCTTCCTGACACCTGTTCC +
Preference number: 3 (lower is better)
Translates to: QHPPKTTLASCA*PWTSPLPDTCS
Trigger: GGAACAGGTGTCAGGAAGGGGTGAGGTCCAAGGGCAAGCACATGATGCCAAGGTAGTTTTGGGAGGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp TATGCAGGGATGCCCAGCATCCTCCCAAAACTACCTTaGCATCATGTGCTTGCCCTTGGACCTCACCCCTTC +
Preference number: 3 (lower is better)
Translates to: YAGMPSILPKLP*HHVLALGPHPF
Trigger: GAAGGGGTGAGGTCCAAGGGCAAGCACATGATGCCAAGGTAGTTTTGGGAGGATGCTGGGCATCCCTGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp TGGTGGGGTGAGGGACTCTACAAGTGTTTCCAGTGGTaGCCTCTGCTCTCCCTTCCACGAGCTATCTTCCTT +
Preference number: 3 (lower is better)
Translates to: WWGEGLYKCFQW*PLLSLPRAIFL
Trigger: AAGGAAGATAGCTCGTGGAAGGGAGAGCAGAGGCCACCACTGGAAACACTTGTAGAGTCCCTCACCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CAA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACAGGAGAACAGCGGTCCTaGAGAAGGTCTGGTTCAGTC +
Preference number: 3 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTGEQRS*RRSGSV
Trigger: GACTGAACCAGACCTTCTCAAGGACCGCTGTTCTCC...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CAA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGCTCTGGATCCTCCTGTaGCCACTTCCTGTGTTGGGA +
Preference number: 3 (lower is better)
Translates to: GASYITQLGQDLHMYPRLLWILL*PLPVLG
Trigger: TCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAG...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR GCA 72 bp TTCTTACATCAGCCCCATACCCACTTACTCATCCCCTaGCCCATGAACTTCCTGGATGCCTCCCTCCTTAGC +
Preference number: 3 (lower is better)
Translates to: FLHQPHTHLLIP*PMNFLDASLLS
Trigger: GCTAAGGAGGGAGGCATCCAGGAAGTTCATGGGGCAGGGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR GCA 72 bp CACAGTCATGAGGAGACATGGGTAGGCCAGGAGATATaGAGGGATGCCCAGCATCCTCCCAAAACTACCTTG +
Preference number: 3 (lower is better)
Translates to: HSHEETWVGQEI*RDAQHPPKTTL
Trigger: CAAGGTAGTTTTGGGAGGATGCTGGGCATCCCTGCATATCTCCTGGCCTACCCATGTCTCCTCATGACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp CATCCCTATGTGTCCCTATATCATTACAGCTGGCACTaGAACCTTCTCCGGGGCAGGAGAAGGAGTGATGGC +
Preference number: 3 (lower is better)
Translates to: HPYVSLYHYSWH*NLLRGRRRSDG
Trigger: GCCATCACTCCTTCTCCTGCCCCGGAGAAGGTTCCAGTGCCAGCTGTAATGATATAGGGACACATAGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp ATCTCGTTTAGCCTCCTCTGGTGTGTGTGTGTGTGGTaGGGTGAGGGACTCTACAAGTGTTTCCAGTGGTGG +
Preference number: 3 (lower is better)
Translates to: ISFSLLWCVCVW*GEGLYKCFQWW
Trigger: CCACCACTGGAAACACTTGTAGAGTCCCTCACCCCACCACACACACACACACCAGAGGAGGCTAAACGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CAA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACCTGAGCGAGCTTCGCTaGGAGGTCTGCCATGGAGGA +
Preference number: 3 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDLSELR*EVCHGG
Trigger: TCCTCCATGGCAGACCTCCAAGCGAAGCTCGCTCAG...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp CCTCCCAAAACTACCTTGGCATCATGTGCTTGCCCTTaGACCTCACCCCTTCCTGACACCTGTTCCCAAAAA +
Preference number: 3 (lower is better)
Translates to: PPKTTLASCACP*TSPLPDTCSQK
Trigger: TTTTTGGGAACAGGTGTCAGGAAGGGGTGAGGTCCAAGGGCAAGCACATGATGCCAAGGTAGTTTTGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CAA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAACTGAGCGAGCTTCGCTaGGAGGTCTGCCATGGAGGA +
Preference number: 3 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKLSELR*EVCHGG
Trigger: TCCTCCATGGCAGACCTCCAAGCGAAGCTCGCTCAG...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR TCA 72 bp CACAAGCTCTATTTAGTGCCTCCTACTCTGTCTAGATaGCTGCAGAGTCCTGTCAGGATCAACGGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: HKLYLVPPTLSR*LQSPVRINGPG
Trigger: TCCAGGCCCGTTGATCCTGACAGGACTCTGCAGTCATCTAGACAGAGTAGGAGGCACTAAATAGAGCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp TCTTTCATAGGTGACTGTCACAGTCATGAGGAGACATaGGTAGGCCAGGAGATATGCAGGGATGCCCAGCAT +
Preference number: 3 (lower is better)
Translates to: SFIGDCHSHEET*VGQEICRDAQH
Trigger: ATGCTGGGCATCCCTGCATATCTCCTGGCCTACCCATGTCTCCTCATGACTGTGACAGTCACCTATGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp TTCTCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTaGACAGGACCTTATGGTAACCTGGTCCCCAGGAGT +
Preference number: 3 (lower is better)
Translates to: FSESSCVNSDLL*TGPYGNLVPRS
Trigger: ACTCCTGGGGACCAGGTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp TTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTaGGATCACAGGCATACCACACCACACCCGGTTTAT +
Preference number: 3 (lower is better)
Translates to: LNSGSSCCHFLC*DHRHTTPHPVY
Trigger: ATAAACCGGGTGTGGTGTGGTATGCCTGTGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CAA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACTGTCTCCCATTCTGCTaGCTTGAAAGCAGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNCLPFC*LESSGE
Trigger: CTCCCCACTGCTTTCAAGCAAGCAGAATGGGAGACA...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR GCA 72 bp TATCCAAGGCTGACTTTGAACTCTGGATCCTCCTGTTaGCACTTCCTGTGTTGGGATCACAGGCATACCACA +
Preference number: 3 (lower is better)
Translates to: YPRLTLNSGSSC*HFLCWDHRHTT
Trigger: TGTGGTATGCCTGTGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTTGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp CTTCCTGACACCTGTTCCCAAAAACAGCCCTTCAGATaGCAAGCACTCCCAATCCCTTTTCCCATCATTCCA +
Preference number: 3 (lower is better)
Translates to: LPDTCSQKQPFR*QALPIPFPIIP
Trigger: TGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGGCTGTTTTTGGGAACAGGTGTCAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CAA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGGATGATAGTACATGCTaGTTACATGGAAGAATGGCT +
Preference number: 3 (lower is better)
Translates to: GASYITQLGQDLHMYPRLDDSTC*LHGRMA
Trigger: AGCCATTCTTCCATGTAACAAGCATGTACTATCATC...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CAA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAATTGCCACTTCCTGTGTaGGGATCACAGGCATACCAC +
Preference number: 3 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKLPLPV*GSQAYH
Trigger: GTGGTATGCCTGTGATCCCAACACAGGAAGTGGCAA...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CAA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAACACCCCCTGCCCTTCTaGCACATCCCCCAGCTTTCA +
Preference number: 3 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKHPLPF*HIPQLS
Trigger: TGAAAGCTGGGGGATGTGCAAGAAGGGCAGGGGGTG...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR TCA 72 bp AGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTaGGAAGGTCTGGTTCAGTCTATACATCATTTCATC +
Preference number: 3 (lower is better)
Translates to: RLWSILKENSGP*EGLVQSIHHFI
Trigger: GATGAAATGATGTATAGACTGAACCAGACCTTCTCAAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR TCA 72 bp CCATCAATGAGCTGGTTTCCCATACAAACCAATTATTaGTTCCCACTGTCTGACCCCCTCTGGTTTCCAGAA +
Preference number: 3 (lower is better)
Translates to: PSMSWFPIQTNY*FPLSDPLWFPE
Trigger: TTCTGGAAACCAGAGGGGGTCAGACAGTGGGAATCAATAATTGGTTTGTATGGGAAACCAGCTCATTGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR GCA 72 bp CACTTGTTAAAAATCTCATCTGTCTCCCATTCTGCTTaGTTGAAAGCAGTGGGGAGTAGGGACTGCTCTTTG +
Preference number: 3 (lower is better)
Translates to: HLLKISSVSHSA*LKAVGSRDCSL
Trigger: CAAAGAGCAGTCCCTACTCCCCACTGCTTTCAAGCAAGCAGAATGGGAGACAGATGAGATTTTTAACAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp GCATCCTTAAGGAGAACAGCGGTCCTTGAGAAGGTCTaGTTCAGTCTATACATCATTTCATCCCTATGTGTC +
Preference number: 3 (lower is better)
Translates to: ASLRRTAVLEKV*FSLYIISSLCV
Trigger: GACACATAGGGATGAAATGATGTATAGACTGAACCAGACCTTCTCAAGGACCGCTGTTCTCCTTAAGGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR GCA 72 bp CATTCTGCTTGCTTGAAAGCAGTGGGGAGTAGGGACTaGTCTTTGCATGGTTCAGATAAAATAAGCAACCAA +
Preference number: 3 (lower is better)
Translates to: HSACLKAVGSRD*SLHGSDKISNQ
Trigger: TTGGTTGCTTATTTTATCTGAACCATGCAAAGAGCAGTCCCTACTCCCCACTGCTTTCAAGCAAGCAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR TCA 72 bp GTGTTTCCAGTGCCCAAGTCTGTGCCTGACACATTTTaGTGGATGATAGTACATGCTTGTTACATGGAAGAA +
Preference number: 3 (lower is better)
Translates to: VFPVPKSVPDTF*WMIVHACYMEE
Trigger: TTCTTCCATGTAACAAGCATGTACTATCATCCATCAAAATGTGTCAGGCACAGACTTGGGCACTGGAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR-3UTR CAA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAAGATGATAGTACATGCTaGTTACATGGAAGAATGGCT +
Preference number: 3 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKDDSTC*LHGRMA
Trigger: AGCCATTCTTCCATGTAACAAGCATGTACTATCATC...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR TCA 72 bp AATCTCTGGGATGAGCAGGCTGAGACATTTCTAGGCTaGGTACAAATATCGAATGATGACATGAGAAGATTC +
Preference number: 3 (lower is better)
Translates to: NLWDEQAETFLG*VQISNDDMRRF
Trigger: GAATCTTCTCATGTCATCATTCGATATTTGTACTCAGCCTAGAAATGTCTCAGCCTGCTCATCCCAGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp CCTACTAAAAGACCCACCAGAATATTCCAACTGTCATaGTGGAATGACACTCCAGAGCAGGAAAAACAAATT +
Preference number: 3 (lower is better)
Translates to: PTKRPTRIFQLS*WNDTPEQEKQI
Trigger: AATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAATATTCTGGTGGGTCTTTTAGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CCA 72 bp ACTAAAAGACCCACCAGAATATTCCAACTGTCATGGTaGAATGACACTCCAGAGCAGGAAAAACAAATTTAT +
Preference number: 3 (lower is better)
Translates to: TKRPTRIFQLSW*NDTPEQEKQIY
Trigger: ATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAATATTCTGGTGGGTCTTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCGTGCTCCTGGGCCACTaGCCTCTGCGGGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFAVLLGH*PLREDL
Trigger: CAGGTCTTCCCGCAGAGGTCAGTGGCCCAGGAGCAC...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCCAGGGAGGGGGCACATaGCCCCGTGCTTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFAQGGGT*PRAFLP
Trigger: AGGCAGGAAAGCACGGGGGCATGTGCCCCCTCCCTG...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGTCTGCAGGGGAGGCTTaGGGTGGGCACCTTGAGCGC +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLSAGEA*GGHLER
Trigger: GCGCTCAAGGTGCCCACCCCAAGCCTCCCCTGCAGA...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACAGCCGTCTCTGCAGGGTaGCCGTCTCCTCCACTTGGC +
Preference number: 4 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTAVSAG*PSPPLG
Trigger: GCCAAGTGGAGGAGACGGCCACCCTGCAGAGACGGC...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGACGCAGCTGCTCCTTCTaGTCCGCCTCGTCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGRSCSF*SASSRS
Trigger: ACTCCGGGACGAGGCGGAGCAGAAGGAGCAGCTGCG...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGTGGGCTGGGGGCAGTTaGGGATTTCCGTCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLWAGGS*GFPSRG
Trigger: TCCCCTCGACGGAAATCCCCAACTGCCCCCAGCCCA...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCTCTGCAGGGGAGGCTTaGGGTGGGCACCTTGAGCGC +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSSAGEA*GGHLER
Trigger: GCGCTCAAGGTGCCCACCCCAAGCCTCCCCTGCAGA...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGCGAAGAGGACCTGCGTaGCCGAGCTCCATCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLRRGPA*PSSIQD
Trigger: ATCCTGGATGGAGCTCGGTCACGCAGGTCCTCTTCG...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGGAAGCTGCCGTTTTGTaGGCGCCTCCTCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLEAAVL*APPPQL
Trigger: GAGCTGAGGAGGAGGCGCTCACAAAACGGCAGCTTC...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCGGCTGCGGTCATCCTTaGGGTGGCTCTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSGCGHP*GGSWPP
Trigger: TGGAGGCCAAGAGCCACCTCAAGGATGACCGCAGCC...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCGTTCCCTGCTCCACGTaGTCCTCTCCGACAGCAAGT +
Preference number: 4 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFAVPCST*SSPTAS
Trigger: ACTTGCTGTCGGAGAGGATCACGTGGAGCAGGGAAC...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCACGCAGCTGCTCCTTCTaGTCCGCCTCGTCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: KADFELWILLLPLPVLGSRSCSF*SASSRS
Trigger: ACTCCGGGACGAGGCGGAGCAGAAGGAGCAGCTGCG...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCCCACCAGGCCCTCCTTaGTGGACCTGTAGGAACCTT +
Preference number: 4 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFAPPGPP*WTCRNL
Trigger: AAGGTTCCTACAGGTCCAGCAAGGAGGGCCTGGTGG...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGCTCCCACCCCCTCCTTaGCGCACCTCTGAACGTTCA +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLLPPPP*RTSERS
Trigger: TGAACGTTCAGAGGTGCGCCAAGGAGGGGGTGGGAG...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCTCAGCCTCCTCCACCTaGCGCTTCATGGCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFASASST*RFMAFR
Trigger: CCTGAAAGCCATGAAGCGCCAGGTGGAGGAGGCTGA...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACCGCCTGGCTCTGCTCTaGGGAGTTGCTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDRLALL*GVAPAG
Trigger: GCCAGCAGGAGCAACTCCTCAGAGCAGAGCCAGGCG...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACATCGTGGAGGGAGAACTaGTTCTGGCCTCTTAGCGGG +
Preference number: 4 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTSWREN*FWPLSG
Trigger: CCCGCTAAGAGGCCAGAAGCAGTTCTCCCTCCACGA...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCTTCCCATCTTTGTTCTaGAGGGGAGGCTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFAFPSLF*RGGLGW
Trigger: CCACCCCAAGCCTCCCCTGCAGAACAAAGATGGGAA...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACAGACTGCTCCAGAAGCTaGCGTTTTGTGAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTDCSRS*RFVSAS
Trigger: GGAGGCGCTCACAAAACGGCAGCTTCTGGAGCAGTC...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACACCACCAGGCCCTCCTTaGTGGACCTGTAGGAACCTT +
Preference number: 4 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTPPGPP*WTCRNL
Trigger: AAGGTTCCTACAGGTCCAGCAAGGAGGGCCTGGTGG...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGAATCCTGGCCTCCATCTaGACCACCAGGCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGILASI*TTRPSL
Trigger: CAAGGAGGGCCTGGTGGTGCAGATGGAGGCCAGGAT...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCATCCTGGCCTCCATCTaGACCACCAGGCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSILASI*TTRPSL
Trigger: CAAGGAGGGCCTGGTGGTGCAGATGGAGGCCAGGAT...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACACGGTCATCCTTGAGGTaGCTCTTGGCCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTRSSLR*LLASSS
Trigger: TGAGCTGGAGGCCAAGAGCCACCTCAAGGATGACCG...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACGGCTGCGGTCATCCTTaGGGTGGCTCTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNGCGHP*GGSWPP
Trigger: TGGAGGCCAAGAGCCACCTCAAGGATGACCGCAGCC...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGATCCAGGATGGGTCCTaGGGAATCTTGTCGCCGGAA +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLIQDGS*GILSPE
Trigger: TTCCGGCGACAAGATTCCGCAGGACCCATCCTGGAT...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAAAGCGCCCTGCAGCTTTaGGGGCGGGCTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKSALQL*GRAAGT
Trigger: AGTCCCAGCAGCCCGCCCGCAAAGCTGCAGGGCGCT...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACATTCCCATCTTTGTTCTaGAGGGGAGGCTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTFPSLF*RGGLGW
Trigger: CCACCCCAAGCCTCCCCTGCAGAACAAAGATGGGAA...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCGTAGCTGGGCTGCCCTaGGCTCCAGCTCCGCAATCC +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPVAGLP*APAPQS
Trigger: GGATTGCGGAGCTGGAGCGCAGGGCAGCCCAGCTAC...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCTCCAGGAGTTCCTTCTaGTCCTGGGAGACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSSRSSF*SWETWL
Trigger: GAGCCAGGTCTCCCAGGAGCAGAAGGAACTCCTGGA...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACATCGCCCAGCTGCTTCTaGAGCTCCAAAGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTSPSCF*SSKEDV
Trigger: CACATCCTCTTTGGAGCTGCAGAAGCAGCTGGGCGA...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCTGCTCATCATCCACCTaGATCACCAGCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFACSSST*ITSSFT
Trigger: GGTGAAGGAGCTGGTGATGCAGGTGGATGATGAGCA...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCACGGGAAGACCTGGGATaGCCGAAGGAGGTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: KADFELWILLLPLPVLGSREDLG*PKEVFA
Trigger: AGCGAACACCTCCTTCGGCCATCCCAGGTCTTCCCG...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCGCCGTCTCTGCAGGGTaGCCGTCTCCTCCACTTGGC +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPAVSAG*PSPPLG
Trigger: GCCAAGTGGAGGAGACGGCCACCCTGCAGAGACGGC...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCTCGAGGCTGCCAGTCTaGCCTTTTCCACTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSSRLPV*PFPLPG
Trigger: GCCTGGAAGTGGAAAAGGCCAGACTGGCAGCCTCGA...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGATCGAGGCTGCCAGTCTaGCCTTTTCCACTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGSRLPV*PFPLPG
Trigger: GCCTGGAAGTGGAAAAGGCCAGACTGGCAGCCTCGA...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGACCAGGCCCTCCTTGCTaGACCTGTAGGAACCTTCCA +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGPGPPC*TCRNLP
Trigger: TGGAAGGTTCCTACAGGTCCAGCAAGGAGGGCCTGG...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCCCAGGCCCTCCTTGCTaGACCTGTAGGAACCTTCCA +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSPGPPC*TCRNLP
Trigger: TGGAAGGTTCCTACAGGTCCAGCAAGGAGGGCCTGG...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGAATAGGAGCCTGCCTTTaGGGGCTGGGAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGIGACL*GLGIPW
Trigger: CCAAGGAATTCCCAGCCCTCAAAGGCAGGCTCCTAT...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCGGTCCTGCAGGTCTCTaGTCTCAGTCTGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSGPAGL*SQSGAV
Trigger: AACAGCACCAGACTGAGATCAGAGACCTGCAGGACC...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTGAAGCTGCCGTTTTGTaGGCGCCTCCTCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLEAAVL*APPPQL
Trigger: GAGCTGAGGAGGAGGCGCTCACAAAACGGCAGCTTC...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCGGTCCCGTCCTCTGTTaGATTTCTCAGCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSGPVLC*ISQPGT
Trigger: AGTCCCTGGCTGAGAAATGCAACAGAGGACGGGACC...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAACAGGGAGGGGGCACATaGCCCCGTGCTTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKQGGGT*PRAFLP
Trigger: AGGCAGGAAAGCACGGGGGCATGTGCCCCCTCCCTG...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGTCCTTCAGTTGTGTCTaGATTTCCGCAAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLSFSCV*ISASSR
Trigger: CCGGGAGCTTGCGGAAATGCAGACACAACTGAAGGA...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGAACCTTGTCCTCCATCTaGTTGATGAGTCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGTLSSI*LMSRLR
Trigger: CCGCAGCCGACTCATCAAGCAGATGGAGGACAAGGT...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACCCGGTCCTCCAGCTCTaGAATCCTGGCCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNPVLQL*NPGLHL
Trigger: CAGATGGAGGCCAGGATTGCAGAGCTGGAGGACCGG...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACCCGGTCCTCCAGCTCTaGAATCCTGGCCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNPVLQL*NPGLHL
Trigger: CAGATGGAGGCCAGGATTGCAGAGCTGGAGGACCGG...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACCTTCGGTTGCTGAGCTaGAGGTTGGCCCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNLRLLS*RLARSL
Trigger: GAGGGATCGGGCCAACCTGCAGCTCAGCAACCGAAG...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACAGCTGCCCCTGCAGCTaGTCATTCACCCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNSCPCS*SFTPIC
Trigger: GCAGATGGGGGTGAATGAGCAGCTGCAGGGGCAGCT...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGTGGCCATCAATTCCCTaGACCCTGATGCTGACACCA +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLWPSIP*TLMLTP
Trigger: TGGTGTCAGCATCAGGGTCCAGGGAATTGATGGCCA...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGAGGGAACCGTAGGATTTaGGGAAGCAGTTCCGGGACT +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGGNRRI*GSSSGT
Trigger: AGTCCCGGAACTGCTTCCCCAAATCCTACGGTTCCC...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCGAGCTCCATCCAGGATaGGTCCTGCGGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSELHPG*VLRNLV
Trigger: GACAAGATTCCGCAGGACCCATCCTGGATGGAGCTC...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCATCCCGCCCAGTTCCTaGCAAGAAGGGAATATACCT +
Preference number: 4 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFAIPPSS*QEGNIP
Trigger: AGGTATATTCCCTTCTTGCCAGGAACTGGGCGGGAT...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGGTGTGGCCTGAGTGCTaGAGTCGGAAGGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLVWPEC*SRKEMS
Trigger: AGACATTTCCTTCCGACTCCAGCACTCAGGCCACAC...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTAGGTCAGCCTCCGCCTaGCTCTGCTCTGAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLRSASA*LCSEEL
Trigger: CAACTCCTCAGAGCAGAGCCAGGCGGAGGCTGACCT...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACAGGTCAGCCTCCGCCTaGCTCTGCTCTGAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNRSASA*LCSEEL
Trigger: CAACTCCTCAGAGCAGAGCCAGGCGGAGGCTGACCT...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCACGGTCATCCTTGAGGTaGCTCTTGGCCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: KADFELWILLLPLPVLGSRSSLR*LLASSS
Trigger: TGAGCTGGAGGCCAAGAGCCACCTCAAGGATGACCG...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCTTTGGGGGTCTTCTATaGCCACAGAGCTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSFGGLL*PQSCRD
Trigger: GTCTCTGCAGCTCTGTGGTCATAGAAGACCCCCAAA...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCAGTCCACACCAGGAATTaGGCAGGTGTCGATATCCCG +
Preference number: 4 (lower is better)
Translates to: KADFELWILLLPLPVLGSVHTRN*AGVDIP
Trigger: CGGGATATCGACACCTGCTCAATTCCTGGTGTGGAC...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGAGCAACTCTTCCTCCTTaGGGCGTAACTCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGATLPP*GVTHPA
Trigger: TGCAGGATGAGTTACGCCTCAAGGAGGAAGAGTTGC...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACTCGTGGAGGGAGAACTaGTTCTGGCCTCTTAGCGGG +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNSWREN*FWPLSG
Trigger: CCCGCTAAGAGGCCAGAAGCAGTTCTCCCTCCACGA...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCTCGTGGGCCCGTCTTTaGGTTCTAGAACTCCATTCC +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSSWARL*VLELHS
Trigger: GGAATGGAGTTCTAGAACGCAAAGACGGGCCCACGA...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCAGGTCCCGTCCTCTGTTaGATTTCTCAGCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: KADFELWILLLPLPVLGSGPVLC*ISQPGT
Trigger: AGTCCCTGGCTGAGAAATGCAACAGAGGACGGGACC...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCAATCCAGGATGGGTCCTaGGGAATCTTGTCGCCGGAA +
Preference number: 4 (lower is better)
Translates to: KADFELWILLLPLPVLGSIQDGS*GILSPE
Trigger: TTCCGGCGACAAGATTCCGCAGGACCCATCCTGGAT...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCGCCCCCGTGCTTTCCTaGCTTCCTTTGTTCAGAACT +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSAPVLS*LPLFRT
Trigger: AGTTCTGAACAAAGGAAGGCAGGAAAGCACGGGGGC...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGCTGATCTCAGTCTGGTaGTGTTCACGCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLLISVW*CSRSIF
Trigger: GAAGATGGAGCGTGAACAGCACCAGACTGAGATCAG...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACCTCTCCCTGAGGGCCTaGAGCTCAGCATCGTACTGT +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNLSLRA*SSASYC
Trigger: ACAGTACGATGCTGAGCTGCAGGCCCTCAGGGAGAG...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072899.9
CDS-3UTR GCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACAGCTCTCTCCGAGCTTaGTCCAGCTCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDSSLRA*SSSFSS
Trigger: GCTGGAGAAGGAGCTGGAGCAAGCTCGGAGAGAGCT...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACTCCAGGAGTTCCTTCTaGTCCTGGGAGACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDSRSSF*SWETWL
Trigger: GAGCCAGGTCTCCCAGGAGCAGAAGGAACTCCTGGA...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCCTTCGGTTGCTGAGCTaGAGGTTGGCCCGATCCCTC +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPLRLLS*RLARSL
Trigger: GAGGGATCGGGCCAACCTGCAGCTCAGCAACCGAAG...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGATGCTCATCATCCACCTaGATCACCAGCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGCSSST*ITSSFT
Trigger: GGTGAAGGAGCTGGTGATGCAGGTGGATGATGAGCA...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCCTCCCACCCCCTCCTTaGCGCACCTCTGAACGTTCA +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPLPPPP*RTSERS
Trigger: TGAACGTTCAGAGGTGCGCCAAGGAGGGGGTGGGAG...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAATGGGCTGGGGGCAGTTaGGGATTTCCGTCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKWAGGS*GFPSRG
Trigger: TCCCCTCGACGGAAATCCCCAACTGCCCCCAGCCCA...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACAATAGGCCTGTGGGCTaGGGGCAGTTGGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNNRPVG*GQLGIS
Trigger: GGAAATCCCCAACTGCCCCCAGCCCACAGGCCTATT...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACTTCAGAATAGGCCTGTaGGCTGGGGGCAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDFRIGL*AGGSWG
Trigger: TCCCCAACTGCCCCCAGCCCACAGGCCTATTCTGAA...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTTTCAGAATAGGCCTGTaGGCTGGGGGCAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLFRIGL*AGGSWG
Trigger: TCCCCAACTGCCCCCAGCCCACAGGCCTATTCTGAA...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACAATCCCGCCCAGTTCCTaGCAAGAAGGGAATATACCT +
Preference number: 4 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTIPPSS*QEGNIP
Trigger: AGGTATATTCCCTTCTTGCCAGGAACTGGGCGGGAT...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCGTGTGGCCTGAGTGCTaGAGTCGGAAGGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSVWPEC*SRKEMS
Trigger: AGACATTTCCTTCCGACTCCAGCACTCAGGCCACAC...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGTGTGTGAGCTCCTGCTaGCCCTTTAAGAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLCVSSC*PFKRSG
Trigger: ACCAGATCTCTTAAAGGGCCAGCAGGAGCTCACACA...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAAATCTGCCTCTGTAGCTaGGCTGCCCTGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKICLCS*AALRSS
Trigger: GCTGGAGCGCAGGGCAGCCCAGCTACAGAGGCAGAT...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGAAGTGTCTCCTTTGCTTaGGCCTCGTCACCCTTCACA +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGSVSFA*ASSPFT
Trigger: TGTGAAGGGTGACGAGGCCCAAGCAAAGGAGACACT...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCAGTGTCTCCTTTGCTTaGGCCTCGTCACCCTTCACA +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSSVSFA*ASSPFT
Trigger: TGTGAAGGGTGACGAGGCCCAAGCAAAGGAGACACT...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTCCAGCTCTGCAATCCTaGCCTCCATCTGCACCACCA +
Preference number: 4 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLPALQS*PPSAPP
Trigger: TGGTGGTGCAGATGGAGGCCAGGATTGCAGAGCTGG...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACTCAGCCTCCTCCACCTaGCGCTTCATGGCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNSASST*RFMAFR
Trigger: CCTGAAAGCCATGAAGCGCCAGGTGGAGGAGGCTGA...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACATAGGAGCCTGCCTTTaGGGGCTGGGAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNIGACL*GLGIPW
Trigger: CCAAGGAATTCCCAGCCCTCAAAGGCAGGCTCCTAT...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACGGTCCTGCAGGTCTCTaGTCTCAGTCTGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDGPAGL*SQSGAV
Trigger: AACAGCACCAGACTGAGATCAGAGACCTGCAGGACC...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCATTGGCAGCTTTCTCCTaGAGAAGCTCGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: KADFELWILLLPLPVLGSLAAFS*RSSLLI
Trigger: GATGAGGAGCGAGCTTCTTCAGGAGAAAGCTGCCAA...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTGGGCACATGCCCCCGTaGTTTCCTGCCTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSGHMPP*FPAFLC
Trigger: ACAAAGGAAGGCAGGAAAGCACGGGGGCATGTGCCC...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCATTGGGCACTCCCTGCTaGTCTGGACTTCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: KADFELWILLLPLPVLGSLGTPC*SGLQSL
Trigger: CAGACTTTGAAGTCCAGAGCAGCAGGGAGTGCCCAA...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGACTGATCTCAGTCTGGTaGTGTTCACGCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGLISVW*CSRSIF
Trigger: GAAGATGGAGCGTGAACAGCACCAGACTGAGATCAG...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACTCCGACAGCTGGTCCTaGAGGTCTCTGATCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNSDSWS*RSLISV
Trigger: GACTGAGATCAGAGACCTGCAGGACCAGCTGTCGGA...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCTCTGCTCTGAGGAGTTaGTCCTGCTGGCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPSALRS*SCWPGP
Trigger: AGGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGA...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACTCCGCAATCCTCCCCTaGAGCTTCTCATTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDSAILP*SFSFSS
Trigger: GGAGGAGAATGAGAAGCTGCAGGGGAGGATTGCGGA...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACTCCGCAATCCTCCCCTaGAGCTTCTCATTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNSAILP*SFSFSS
Trigger: GGAGGAGAATGAGAAGCTGCAGGGGAGGATTGCGGA...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACTTCACATCCTCCATCTaGCTCTGTAGCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNFTSSI*LCSWAA
Trigger: GGCAGCCCAGCTACAGAGGCAGATGGAGGATGTGAA...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCAGCTCTCTCCGAGCTTaGTCCAGCTCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPSSLRA*SSSFSS
Trigger: GCTGGAGAAGGAGCTGGAGCAAGCTCGGAGAGAGCT...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTGCTCCAAAGAGGATGTaGGGGAGGCCTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLAPKRM*GRPQQC
Trigger: ACATTGCTGAGGCCTCCCGCACATCCTCTTTGGAGC...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACGCTCCAAAGAGGATGTaGGGGAGGCCTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNAPKRM*GRPQQC
Trigger: ACATTGCTGAGGCCTCCCGCACATCCTCTTTGGAGC...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCAAGGTCCTTCAGCGACTaGTCCAGAAGCTGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: KADFELWILLLPLPVLGSRSFSD*SRSCRF
Trigger: AAAACGGCAGCTTCTGGAGCAGTCGCTGAAGGACCT...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTACCTTGTCCTCCATCTaGTTGATGAGTCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLTLSSI*LMSRLR
Trigger: CCGCAGCCGACTCATCAAGCAGATGGAGGACAAGGT...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTTCATTCACCCCCATCTaGTCCTCCAGCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSSFTPI*SSSSLC
Trigger: GCAGAGGGAGCTGGAGGAGCAGATGGGGGTGAATGA...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCTCATTCACCCCCATCTaGTCCTCCAGCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPSFTPI*SSSSLC
Trigger: GCAGAGGGAGCTGGAGGAGCAGATGGGGGTGAATGA...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAAAGCTGCCCCTGCAGCTaGTCATTCACCCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKSCPCS*SFTPIC
Trigger: GCAGATGGGGGTGAATGAGCAGCTGCAGGGGCAGCT...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGAGGAATTCCTTGGCTTTaGAGTGTCACCACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGGIPWL*SVTTGK
Trigger: CTTGCCAGTGGTGACACTCCAAAGCCAAGGAATTCC...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCGGAATTCCTTGGCTTTaGAGTGTCACCACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSGIPWL*SVTTGK
Trigger: CTTGCCAGTGGTGACACTCCAAAGCCAAGGAATTCC...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCAATAGGCCTGTGGGCTaGGGGCAGTTGGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPNRPVG*GQLGIS
Trigger: GGAAATCCCCAACTGCCCCCAGCCCACAGGCCTATT...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGACGCTGTCGGCATGAATaGCGCATTCCTGATCATCAA +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGRCRHE*RIPDHQ
Trigger: TTGATGATCAGGAATGCGCCATTCATGCCGACAGCG...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACCGGGAAGACCTGGGATaGCCGAAGGAGGTGTTCGCT +
Preference number: 4 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYREDLG*PKEVFA
Trigger: AGCGAACACCTCCTTCGGCCATCCCAGGTCTTCCCG...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGATCTCTGATCTCAGTCTaGTGCTGTTCACGCTCCATC +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGSLISV*CCSRSI
Trigger: GATGGAGCGTGAACAGCACCAGACTGAGATCAGAGA...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACTCTGCAGCTTCTCGATaGTCTTGTCCAGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNSAASR*SCPGAT
Trigger: GGTGGCACCTGGACAAGACCATCGAGAAGCTGCAGA...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACCTCAGCTGGTCCTTCTaGTCCGTCAGTGACAGATGC +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNLSWSF*SVSDRC
Trigger: GCATCTGTCACTGACGGACCAGAAGGACCAGCTGAG...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTAGGCGCAAGCTCAGCTaGTCCTTCTGGTCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSRRKLS*SFWSVS
Trigger: ACTGACGGACCAGAAGGACCAGCTGAGCTTGCGCCT...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CAA 72 bp TTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTaGGGATCACAGGCATACCACACCACACCCGGTTTA +
Preference number: 4 (lower is better)
Translates to: FELWILLLPLPV*GSQAYHTTPGL
Trigger: TAAACCGGGTGTGGTGTGGTATGCCTGTGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CAA 72 bp GTATCCAAGGCTGACTTTGAACTCTGGATCCTCCTGTaGCCACTTCCTGTGTTGGGATCACAGGCATACCAC +
Preference number: 4 (lower is better)
Translates to: VSKADFELWILL*PLPVLGSQAYH
Trigger: GTGGTATGCCTGTGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTTGGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCGTCCACACCAGGAATTaGGCAGGTGTCGATATCCCG +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPVHTRN*AGVDIP
Trigger: CGGGATATCGACACCTGCTCAATTCCTGGTGTGGAC...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACCGTTCGTTTGTTGTGTaGGCTCCTGCTGGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNRSFVV*APAGPL
Trigger: TAAAGGGCCAGCAGGAGCTCACACAACAAACGAACG...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACGCAACTCTTCCTCCTTaGGGCGTAACTCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNATLPP*GVTHPA
Trigger: TGCAGGATGAGTTACGCCTCAAGGAGGAAGAGTTGC...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACTTTCTGGGAAAGGTGTaGCTGCTAGACACCGCTCAG +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNFLGKV*LLDTAQ
Trigger: CTGAGCGGTGTCTAGCAGGCACACCTTTCCCAGAAA...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACTTTCTGGGAAAGGTGTaGCTGCTAGACACCGCTCAG +
Preference number: 4 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDFLGKV*LLDTAQ
Trigger: CTGAGCGGTGTCTAGCAGGCACACCTTTCCCAGAAA...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCAGGGTGATGCTTCTTTaGGTTCACCTCATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFARVMLL*VHLILF
Trigger: GAAAAGAATGAGGTGAACGCAAAGAAGCATCACCCT...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTATGACGAAGAGGACCTaGGTGACCGAGCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSMTKRT*VTELHP
Trigger: TGGATGGAGCTCGGTCACGCAGGTCCTCTTCGTCAT...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAAAGCGCCCTGCAGCTTTaGGGGCGGGCTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKSALQL*GRAAGT
Trigger: AGTCCCAGCAGCCCGCCCGCAAAGCTGCAGGGCGCT...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTGCCCCCGTGCTTTCCTaGCTTCCTTTGTTCAGAACT +
Preference number: 4 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLAPVLS*LPLFRT
Trigger: AGTTCTGAACAAAGGAAGGCAGGAAAGCACGGGGGC...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACGGGCACATGCCCCCGTaGTTTCCTGCCTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYGHMPP*FPAFLC
Trigger: ACAAAGGAAGGCAGGAAAGCACGGGGGCATGTGCCC...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGATGTTGTGTGAGCTCCTaGTGGCCCTTTAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGCCVSS*WPFKRS
Trigger: AGATCTCTTAAAGGGCCAGCAGGAGCTCACACAACA...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTAGGTCCTGCTTGGCTTaGAGGAGCTCCTCAATCAGG +
Preference number: 4 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSRSCLA*RSSSIR
Trigger: CCTGATTGAGGAGCTCCTGCAAGCCAAGCAGGACCT...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072899.9
CDS-3UTR GCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCTTCACATCCTCCATCTaGCTCTGTAGCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPFTSSI*LCSWAA
Trigger: GGCAGCCCAGCTACAGAGGCAGATGGAGGATGTGAA...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACAGGGCTTCCTCCAGCTaGTGTACTTCACTCTCACAC +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNRASSS*CTSLSH
Trigger: GTGTGAGAGTGAAGTACAGCAGCTGGAGGAAGCCCT...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACAGGTCCTTCAGCGACTaGTCCAGAAGCTGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNRSFSD*SRSCRF
Trigger: AAAACGGCAGCTTCTGGAGCAGTCGCTGAAGGACCT...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCATCCGTCAGTGACAGATaGTCATCATCCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: KADFELWILLLPLPVLGSSVSDR*SSSTCI
Trigger: GATGCAGGTGGATGATGAGCATCTGTCACTGACGGA...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACTGGCCATCAATTCCCTaGACCCTGATGCTGACACCA +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNWPSIP*TLMLTP
Trigger: TGGTGTCAGCATCAGGGTCCAGGGAATTGATGGCCA...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCTCCTTGATGTTCTGTTaGTTCTTCATCTCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFASLMFC*FFISSC
Trigger: GCAACTGGAGATGAAGAACCAACAGAACATCAAGGA...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTCTCAGCTGGTCCTTCTaGTCCGTCAGTGACAGATGC +
Preference number: 4 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSLSWSF*SVSDRC
Trigger: GCATCTGTCACTGACGGACCAGAAGGACCAGCTGAG...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACAACGTTCACGCACACTaGGGTCTGCTTTTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYNVHAH*GLLLGV
Trigger: GACCCCCAAAAGCAGACCTCAGTGTGCGTGAACGTT...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAAGTGCTCCTGGGCCACTaGCCTCTGCGGGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKVLLGH*PLREDL
Trigger: CAGGTCTTCCCGCAGAGGTCAGTGGCCCAGGAGCAC...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTACGCACACTGAGGTCTaGTTTTGGGGGTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLTHTEV*FWGSSM
Trigger: CATAGAAGACCCCCAAAAGCAGACCTCAGTGTGCGT...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGTTCTTCATCTCCAGTTaGAGTTGCTGCTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLFFISS*SCCCSS
Trigger: TGAACTACAGCAGCAACTGCAACTGGAGATGAAGAA...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACTCCGACAGCTGGTCCTaGAGGTCTCTGATCTCAGTC +
Preference number: 4 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYSDSWS*RSLISV
Trigger: GACTGAGATCAGAGACCTGCAGGACCAGCTGTCGGA...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTAGGGCTTCCTCCAGCTaGTGTACTTCACTCTCACAC +
Preference number: 4 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSRASSS*CTSLSH
Trigger: GTGTGAGAGTGAAGTACAGCAGCTGGAGGAAGCCCT...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACTCGCCCAGCTGCTTCTaGAGCTCCAAAGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYSPSCF*SSKEDV
Trigger: CACATCCTCTTTGGAGCTGCAGAAGCAGCTGGGCGA...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTAGGCGTAACTCATCCTaGATCTTCGAGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSRRNSS*IFEAAS
Trigger: ACTGGCAGCCTCGAAGATGCAGGATGAGTTACGCCT...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACTCCGTCAGTGACAGATaGTCATCATCCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNSVSDR*SSSTCI
Trigger: GATGCAGGTGGATGATGAGCATCTGTCACTGACGGA...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACCGCTGTCGGCATGAATaGCGCATTCCTGATCATCAA +
Preference number: 4 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDRCRHE*RIPDHQ
Trigger: TTGATGATCAGGAATGCGCCATTCATGCCGACAGCG...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACTACCTTCTGTTTTCATaGCGGTTGACGCTGTCGGCA +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNYLLFS*RLTLSA
Trigger: TGCCGACAGCGTCAACCGCCATGAAAACAGAAGGTA...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACTCTCTGATCTCAGTCTaGTGCTGTTCACGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNSLISV*CCSRSI
Trigger: GATGGAGCGTGAACAGCACCAGACTGAGATCAGAGA...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCTCTCCTGGTCATGGCTaGAAACCTCCTCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPSPGHG*KPPPSR
Trigger: CCTTGAAGGAGGAGGTTTCCAGCCATGACCAGGAGA...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072899.9
CDS-3UTR CCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACAGCTTATCCATCTCCTaGTCATGGCTGGAAACCTCC +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNSLSIS*SWLETS
Trigger: GGAGGTTTCCAGCCATGACCAGGAGATGGATAAGCT...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072899.9
CDS-3UTR CCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACTCTCCAGCGCCCTTCTaGCACATGTGGCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDSPAPF*HMWLLF
Trigger: AAAAAGAAGCCACATGTGCCAGAAGGGCGCTGGAGA...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGACTCTAAGTCTTGCTTaGCAGCTTTCTCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GASYITQLGQDLHMYPRLTLSLA*QLSPEE
Trigger: TTCTTCAGGAGAAAGCTGCCAAGCAAGACTTAGAGT...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
3UTR CAA 72 bp GCTTGCTTGAAAGCAGTGGGGAGTAGGGACTGCTCTTaGCATGGTTCAGATAAAATAAGCAACCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: ACLKAVGSRDCS*HGSDKISNQGL
Trigger: GAGGCCTTGGTTGCTTATTTTATCTGAACCATGCAAAGAGCAGTCCCTACTCCCCACTGCTTTCAAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACCGTTCGTTTGTTGTGTaGGCTCCTGCTGGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYRSFVV*APAGPL
Trigger: TAAAGGGCCAGCAGGAGCTCACACAACAAACGAACG...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACGTTCCTCTTTGGCAATaGGCAGATCTTGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNVPLWQ*ADLEGP
Trigger: AGGACCTTCAAGATCTGCTCATTGCCAAAGAGGAAC...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072899.9
CDS-3UTR TCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACTTGGCAGCTTTCTCCTaGAGAAGCTCGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYLAAFS*RSSLLI
Trigger: GATGAGGAGCGAGCTTCTTCAGGAGAAAGCTGCCAA...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACCTTCTGGTCCGTCAGTaGCAGATGCTCATCATCCAC +
Preference number: 4 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYLLVRQ*QMLIIH
Trigger: GTGGATGATGAGCATCTGTCACTGACGGACCAGAAG...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAACTTCTGGTCCGTCAGTaGCAGATGCTCATCATCCAC +
Preference number: 4 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKLLVRQ*QMLIIH
Trigger: GTGGATGATGAGCATCTGTCACTGACGGACCAGAAG...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCACGCACACTGAGGTCTaGTTTTGGGGGTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPTHTEV*FWGSSM
Trigger: CATAGAAGACCCCCAAAAGCAGACCTCAGTGTGCGT...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAATCCTTCAGTTGTGTCTaGATTTCCGCAAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKSFSCV*ISASSR
Trigger: CCGGGAGCTTGCGGAAATGCAGACACAACTGAAGGA...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACAGGCGTAACTCATCCTaGATCTTCGAGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYRRNSS*IFEAAS
Trigger: ACTGGCAGCCTCGAAGATGCAGGATGAGTTACGCCT...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACTTCAGAGAGTTGAGCTaGCCCTGCAGCTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYFRELS*PCSCSF
Trigger: GAATGAGCAGCTGCAGGGGCAGCTCAACTCTCTGAA...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACACTGAGGTCTGCTTTTaGGGGTCTTCTATGACCACA +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNTEVCF*GSSMTT
Trigger: TGTGGTCATAGAAGACCCCCAAAAGCAGACCTCAGT...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTTACCTTCTGTTTTCATaGCGGTTGACGCTGTCGGCA +
Preference number: 4 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSYLLFS*RLTLSA
Trigger: TGCCGACAGCGTCAACCGCCATGAAAACAGAAGGTA...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACTGTAAAGGATCTGCTTaGCGGTCTCCTCGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNCKGSA*RSPRSF
Trigger: AAACGAACGAGGAGACCGCCAAGCAGATCCTTTACA...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTCACTCCCTGCTGCTCTaGACTTCAAAGTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLHSLLL*TSKSGF
Trigger: AAATCCAGACTTTGAAGTCCAGAGCAGCAGGGAGTG...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACCACTCCCTGCTGCTCTaGACTTCAAAGTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNHSLLL*TSKSGF
Trigger: AAATCCAGACTTTGAAGTCCAGAGCAGCAGGGAGTG...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAATCCATCTCCTGGTCATaGCTGGAAACCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKSISWS*LETSSF
Trigger: GAAGGAGGAGGTTTCCAGCCATGACCAGGAGATGGA...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072899.9
CDS-3UTR CCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCGGACCTCAACATTCTTaGTTGCCTCCTCCACACTCT +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPGPQHS*LPPPHS
Trigger: AGAGTGTGGAGGAGGCAACCAAGAATGTTGAGGTCC...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072899.9
CDS-3UTR CCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAAATCTGCCTCTGTAGCTaGGCTGCCCTGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKICLCS*AALRSS
Trigger: GCTGGAGCGCAGGGCAGCCCAGCTACAGAGGCAGAT...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACAACAGCAAGTCAGCGTTaGTTCTTTCTTCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTTASQR*FFLLPI
Trigger: AATTGGAAGAAGAAAGAACCAACGCTGACTTGCTGT...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACCAGGTTATTTATCACTaGAGATGGAAACGATGGCGC +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNQVIYH*RWKRWR
Trigger: GCGCCATCGTTTCCATCTTCAGTGATAAATAACCTG...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTCAGGTTATTTATCACTaGAGATGGAAACGATGGCGC +
Preference number: 4 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLQVIYH*RWKRWR
Trigger: GCGCCATCGTTTCCATCTTCAGTGATAAATAACCTG...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTATCTCCAGTTGCAGTTaGTGCTGTAGTTCAGACACT +
Preference number: 4 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLISSCS*CCSSDT
Trigger: AGTGTCTGAACTACAGCAGCAACTGCAACTGGAGAT...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCCACCTCATTCTTTTCTaGGTCATAGGGCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPHLILF*VIGLQK
Trigger: CTTCTGCAGCCCTATGACCCAGAAAAGAATGAGGTG...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCACTGAGGTCTGCTTTTaGGGGTCTTCTATGACCACA +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPTEVCF*GSSMTT
Trigger: TGTGGTCATAGAAGACCCCCAAAAGCAGACCTCAGT...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CTTCCACGAGCTATCTTCCTTCATATAGTTAGCCCCATGGCTACCAGAAGGAACAGGGTGATGCTTCTTTaGGTTCACCTCATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LPRAIFLHIVSPMATRRNRVMLL*VHLILF
Trigger: GAAAAGAATGAGGTGAACGCAAAGAAGCATCACCCT...GTTCCTTCTGGTAGCCATGGGGCTAACTATATGAAGGAAGATAGCTCGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCGATCCAATAGACTGTTaGCTTCAGAGGGAGAATTCG +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPDPIDC*LQRENS
Trigger: CGAATTCTCCCTCTGAAGGCAACAGTCTATTGGATC...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAAGACTGCTCCAGAAGCTaGCGTTTTGTGAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKDCSRS*RFVSAS
Trigger: GGAGGCGCTCACAAAACGGCAGCTTCTGGAGCAGTC...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCCTGGCCTGTTTTTCTTaGTTTCAGAATAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPLACFS*FQNRPV
Trigger: CACAGGCCTATTCTGAAACCAAGAAAAACAGGCCAG...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACTATTCTGTGTTTCCCTaGAGACCAAATGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNYSVFP*RPNGKA
Trigger: TGCCTTTCCATTTGGTCTCCAGGGAAACACAGAATA...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACTCCTTGATGTTCTGTTaGTTCTTCATCTCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNSLMFC*FFISSC
Trigger: GCAACTGGAGATGAAGAACCAACAGAACATCAAGGA...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAAGATCCAATAGACTGTTaGCTTCAGAGGGAGAATTCG +
Preference number: 4 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKDPIDC*LQRENS
Trigger: CGAATTCTCCCTCTGAAGGCAACAGTCTATTGGATC...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAAATCTCCAGTTGCAGTTaGTGCTGTAGTTCAGACACT +
Preference number: 4 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKISSCS*CCSSDT
Trigger: AGTGTCTGAACTACAGCAGCAACTGCAACTGGAGAT...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAACAGGTACGGGTTTTCTaGAAGCTGCAGTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKQVRVF*KLQFLR
Trigger: CCGGAGGAACTGCAGCTTCCAGAAAACCCGTACCTG...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAACTGGCCTGTTTTTCTTaGTTTCAGAATAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKLACFS*FQNRPV
Trigger: CACAGGCCTATTCTGAAACCAAGAAAAACAGGCCAG...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAAGAGCTCCATCCAGGATaGGTCCTGCGGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKELHPG*VLRNLV
Trigger: GACAAGATTCCGCAGGACCCATCCTGGATGGAGCTC...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCAATTTTTCAATTAACTaGTCCACACCAGGAATTGAG +
Preference number: 4 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSNFSIN*STPGIE
Trigger: CTCAATTCCTGGTGTGGACCAGTTAATTGAAAAATT...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAATCTGCAGCTTCTCGATaGTCTTGTCCAGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKSAASR*SCPGAT
Trigger: GGTGGCACCTGGACAAGACCATCGAGAAGCTGCAGA...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTACTCTAAGTCTTGCTTaGCAGCTTTCTCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSTLSLA*QLSPEE
Trigger: TTCTTCAGGAGAAAGCTGCCAAGCAAGACTTAGAGT...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTATCAATTTGTTCTTCTaGTCCAATAGACTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLINLFF*SNRLLP
Trigger: AGGCAACAGTCTATTGGATCAGAAGAACAAATTGAT...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAATTGGGCACTCCCTGCTaGTCTGGACTTCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKLGTPC*SGLQSL
Trigger: CAGACTTTGAAGTCCAGAGCAGCAGGGAGTGCCCAA...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp CGCATTGCCCCAGCTGAGCTACATTTCCGGCTCAACATTTTTACTTCTATTTACTTCTTCATCTCCAGTTaGAGTTGCTGCTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: RIAPAELHFRLNIFTSIYFFISS*SCCCSS
Trigger: TGAACTACAGCAGCAACTGCAACTGGAGATGAAGAA...GTAAATAGAAGTAAAAATGTTGAGCCGGAAATGTAGCTCAGCTGGGGCAATGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAAAATTCAATCTCCAATTaGGACACCTTGTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKNSISN*DTLSSI
Trigger: GATGGAGGACAAGGTGTCCCAATTGGAGATTGAATT...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACAATTTTTCAATTAACTaGTCCACACCAGGAATTGAG +
Preference number: 4 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDNFSIN*STPGIE
Trigger: CTCAATTCCTGGTGTGGACCAGTTAATTGAAAAATT...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAATGTGTGAGCTCCTGCTaGCCCTTTAAGAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKCVSSC*PFKRSG
Trigger: ACCAGATCTCTTAAAGGGCCAGCAGGAGCTCACACA...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAATCTCCAGCGCCCTTCTaGCACATGTGGCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKSPAPF*HMWLLF
Trigger: AAAAAGAAGCCACATGTGCCAGAAGGGCGCTGGAGA...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR GCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAATGTTGTGTGAGCTCCTaGTGGCCCTTTAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKCCVSS*WPFKRS
Trigger: AGATCTCTTAAAGGGCCAGCAGGAGCTCACACAACA...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAATATTCTGTGTTTCCCTaGAGACCAAATGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKYSVFP*RPNGKA
Trigger: TGCCTTTCCATTTGGTCTCCAGGGAAACACAGAATA...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR TCA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAAATCAATTTGTTCTTCTaGTCCAATAGACTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKINLFF*SNRLLP
Trigger: AGGCAACAGTCTATTGGATCAGAAGAACAAATTGAT...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS GCA 90 bp CCCTGCAGCTTTGCGGGCGGGCTGCTGGGACTGTGCTTCCCACGGTaGTCCTGGGCCACTGACCTCTGCGGGAAGACCTGGGATGGCCGA +
Preference number: 5 (lower is better)
Translates to: PCSFAGGLLGLCFPR*SWATDLCGKTWDGR
Trigger: TCGGCCATCCCAGGTCTTCCCGCAGAGGTCAGTGGCCCAGGAGCACCGTGGGAAGCACAGTCCCAGCAGCCCGCCCGCAAAGCTGCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 90 bp GGGCGGGCTGCTGGGACTGTGCTTCCCACGGTGCTCCTGGGCCACTaGCCTCTGCGGGAAGACCTGGGATGGCCGAAGGAGGTGTTCGCT +
Preference number: 5 (lower is better)
Translates to: GRAAGTVLPTVLLGH*PLREDLGWPKEVFA
Trigger: AGCGAACACCTCCTTCGGCCATCCCAGGTCTTCCCGCAGAGGTCAGTGGCCCAGGAGCACCGTGGGAAGCACAGTCCCAGCAGCCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 90 bp TGCTTCCCACGGTGCTCCTGGGCCACTGACCTCTGCGGGAAGACCTaGGATGGCCGAAGGAGGTGTTCGCTAGACTTGCCCAGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: CFPRCSWATDLCGKT*DGRRRCSLDLPRFL
Trigger: CAGGAACCTGGGCAAGTCTAGCGAACACCTCCTTCGGCCATCCCAGGTCTTCCCGCAGAGGTCAGTGGCCCAGGAGCACCGTGGGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp GGGGCAGCTTCGTGGGCCCGTCTTTGCGTTCTAGAACTCCATTCCTaGCCTCGTGGAGGGAGAACTGCTTCTGGCCTCTTAGCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GAASWARLCVLELHS*PRGGRTASGLLAGW
Trigger: CCAGCCCGCTAAGAGGCCAGAAGCAGTTCTCCCTCCACGAGGGCAGGAATGGAGTTCTAGAACGCAAAGACGGGCCCACGAAGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp TCCTTCTGCTCCGCCTCGTCCCGGAGTTTCTCCAGGAGTTCCTTCTaGTCCTGGGAGACCTGGCTCAGCTCTCTCCGAGCTTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SFCSASSRSFSRSSF*SWETWLSSLRACSS
Trigger: GCTGGAGCAAGCTCGGAGAGAGCTGAGCCAGGTCTCCCAGGAGCAGAAGGAACTCCTGGAGAAACTCCGGGACGAGGCGGAGCAGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp ATCACCAGCTCCTTCACCTTCCGCTCCAGCCTTCGGTTGCTGAGCTaGAGGTTGGCCCGATCCCTCTCCTCATTCTCCAGCCGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: ITSSFTFRSSLRLLS*RLARSLSSFSSRSS
Trigger: GGAGGACCGGCTGGAGAATGAGGAGAGGGATCGGGCCAACCTGCAGCTCAGCAACCGAAGGCTGGAGCGGAAGGTGAAGGAGCTGGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp CACGCAGGTCAGCCTCCGCCTGGCTCTGCTCTGAGGAGTTGCTCCTaGTGGCCAGGACCTCAACATTCTCAATCAGGGCTCCCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: HAGQPPPGSALRSCS*WPGPQHSQSGLPSP
Trigger: GGGAGAAGGGAGCCCTGATTGAGAATGTTGAGGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGAGCCAGGCGGAGGCTGACCTGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121322.8
CDS CCA 90 bp TCTTCCTCAGCTCGCCTTCACTTTCCTCCAGCCGTCTCTGCAGGGTaGCCGTCTCCTCCACTTGGCTCTGGTGCCGGACTCGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: SSSARLHFPPAVSAG*PSPPLGSGAGLAAL
Trigger: AAGAGCTGCGAGTCCGGCACCAGAGCCAAGTGGAGGAGACGGCCACCCTGCAGAGACGGCTGGAGGAAAGTGAAGGCGAGCTGAGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 90 bp GCAGGTCAGCCTCCGCCTGGCTCTGCTCTGAGGAGTTGCTCCTGCTaGCCAGGACCTCAACATTCTTGGTTGCCTCCTCCACACTCTCCC +
Preference number: 5 (lower is better)
Translates to: AGQPPPGSALRSCSC*PGPQHSWLPPPHSP
Trigger: GGGAGAGTGTGGAGGAGGCAACCAAGAATGTTGAGGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGAGCCAGGCGGAGGCTGACCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS CCA 90 bp TCGTCCCGGAGTTTCTCCAGGAGTTCCTTCTGCTCCTGGGAGACCTaGCTCAGCTCTCTCCGAGCTTGCTCCAGCTCCTTCTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: SSRSFSRSSFCSWET*LSSLRACSSSFSSA
Trigger: GGCGCTGGAGAAGGAGCTGGAGCAAGCTCGGAGAGAGCTGAGCCAGGTCTCCCAGGAGCAGAAGGAACTCCTGGAGAAACTCCGGGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp CGTCACCCTTCACATCCTCCATCTGCCTCTGTAGCTGGGCTGCCCTaGGCTCCAGCTCCGCAATCCTCCCCTGCAGCTTCTCATTCTCCT +
Preference number: 5 (lower is better)
Translates to: RHPSHPPSASVAGLP*APAPQSSPAASHSP
Trigger: AGGAGAATGAGAAGCTGCAGGGGAGGATTGCGGAGCTGGAGCGCAGGGCAGCCCAGCTACAGAGGCAGATGGAGGATGTGAAGGGTGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp AGGTGCCACCGCTCGCTCTCCATCTCGTTCTTCAGCTTTCGCAGCTaGTCCTTCTGCTCCGCCTCGTCCCGGAGTTTCTCCAGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: RCHRSLSISFFSFRS*SFCSASSRSFSRSS
Trigger: GGAACTCCTGGAGAAACTCCGGGACGAGGCGGAGCAGAAGGAGCAGCTGCGAAAGCTGAAGAACGAGATGGAGAGCGAGCGGTGGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp GCAAGCTCCCGGCGGTTCTTCTCCTTATACTCGCCCAGCTGCTTCTaGAGCTCCAAAGAGGATGTGCGGGAGGCCTCAGCAATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: ASSRRFFSLYSPSCF*SSKEDVREASAMSA
Trigger: GGCCGACATTGCTGAGGCCTCCCGCACATCCTCTTTGGAGCTGCAGAAGCAGCTGGGCGAGTATAAGGAGAAGAACCGCCGGGAGCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 90 bp TCGTGGATGACGAAGAGGACCTGCGTGACCGAGCTCCATCCAGGATaGGTCCTGCGGAATCTTGTCGCCGGAAGGGTAGCACATCTGGCC +
Preference number: 5 (lower is better)
Translates to: SWMTKRTCVTELHPG*VLRNLVAGRVAHLA
Trigger: GGCCAGATGTGCTACCCTTCCGGCGACAAGATTCCGCAGGACCCATCCTGGATGGAGCTCGGTCACGCAGGTCCTCTTCGTCATCCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 90 bp GCGCCTCCTCCTCAGCTCGCTGGTAGTCCTGCAACTCTTCCTCCTTaGGGCGTAACTCATCCTGCATCTTCGAGGCTGCCAGTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: APPPQLAGSPATLPP*GVTHPASSRLPVWP
Trigger: AGGCCAGACTGGCAGCCTCGAAGATGCAGGATGAGTTACGCCTCAAGGAGGAAGAGTTGCAGGACTACCAGCGAGCTGAGGAGGAGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp CTTTCTCACGCAGGTCAGCCTCCGCCTGGCTCTGCTCTGAGGAGTTaGTCCTGCTGGCCAGGACCTCAACATTCTTGGTTGCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: LSHAGQPPPGSALRS*SCWPGPQHSWLPPP
Trigger: TGGAGGAGGCAACCAAGAATGTTGAGGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGAGCCAGGCGGAGGCTGACCTGCGTGAGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS GCA 90 bp AGTTCCTTCTGCTCCTGGGAGACCTGGCTCAGCTCTCTCCGAGCTTaGTCCAGCTCCTTCTCCAGCGCCCTTCTGGCACATGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: SSFCSWETWLSSLRA*SSSFSSALLAHVAS
Trigger: AGAAGCCACATGTGCCAGAAGGGCGCTGGAGAAGGAGCTGGAGCAAGCTCGGAGAGAGCTGAGCCAGGTCTCCCAGGAGCAGAAGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp CGCTCGCTCTCCATCTCGTTCTTCAGCTTTCGCAGCTGCTCCTTCTaGTCCGCCTCGTCCCGGAGTTTCTCCAGGAGTTCCTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RSLSISFFSFRSCSF*SASSRSFSRSSFCS
Trigger: GGAGCAGAAGGAACTCCTGGAGAAACTCCGGGACGAGGCGGAGCAGAAGGAGCAGCTGCGAAAGCTGAAGAACGAGATGGAGAGCGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 90 bp TCCTGCCCTCGTGGAGGGAGAACTGCTTCTGGCCTCTTAGCGGGCTaGTTTGCAGGTACGGGTTTTCTGGAAGCTGCAGTTCCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: SCPRGGRTASGLLAG*FAGTGFLEAAVPPE
Trigger: CTCCGGAGGAACTGCAGCTTCCAGAAAACCCGTACCTGCAAACCAGCCCGCTAAGAGGCCAGAAGCAGTTCTCCCTCCACGAGGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp CCCTCGTGGAGGGAGAACTGCTTCTGGCCTCTTAGCGGGCTGGTTTaGAGGTACGGGTTTTCTGGAAGCTGCAGTTCCTCCGGAGTGTTC +
Preference number: 5 (lower is better)
Translates to: PSWRENCFWPLSGLV*RYGFSGSCSSSGVF
Trigger: GAACACTCCGGAGGAACTGCAGCTTCCAGAAAACCCGTACCTGCAAACCAGCCCGCTAAGAGGCCAGAAGCAGTTCTCCCTCCACGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp TCCTCCTTCAGCACTTTCTCACGCAGGTCAGCCTCCGCCTGGCTCTaGTCTGAGGAGTTGCTCCTGCTGGCCAGGACCTCAACATTCTTG +
Preference number: 5 (lower is better)
Translates to: SSFSTFSRRSASAWL*SEELLLLARTSTFL
Trigger: CAAGAATGTTGAGGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGAGCCAGGCGGAGGCTGACCTGCGTGAGAAAGTGCTGAAGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS GCA 90 bp TCCTCCTTCAGCACTTTCTCACGCAGGTCAGCCTCCGCCTGGCTCTaGTCTGAGGAGTTGCTCCTGCTGGCCAGGACCTCAACATTCTCA +
Preference number: 5 (lower is better)
Translates to: SSFSTFSRRSASAWL*SEELLLLARTSTFS
Trigger: TGAGAATGTTGAGGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGAGCCAGGCGGAGGCTGACCTGCGTGAGAAAGTGCTGAAGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121322.8
CDS CCA 90 bp TTCGTGGGCCCGTCTTTGCGTTCTAGAACTCCATTCCTGCCCTCGTaGAGGGAGAACTGCTTCTGGCCTCTTAGCGGGCTGGTTTGCAGG +
Preference number: 5 (lower is better)
Translates to: FVGPSLRSRTPFLPS*RENCFWPLSGLVCR
Trigger: CCTGCAAACCAGCCCGCTAAGAGGCCAGAAGCAGTTCTCCCTCCACGAGGGCAGGAATGGAGTTCTAGAACGCAAAGACGGGCCCACGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 90 bp CATACTCCAGGTCCTTCAGCGACTGCTCCAGAAGCTGCCGTTTTGTaGGCGCCTCCTCCTCAGCTCGCTGGTAGTCCTGCAACTCTTCCT +
Preference number: 5 (lower is better)
Translates to: HTPGPSATAPEAAVL*APPPQLAGSPATLP
Trigger: AGGAAGAGTTGCAGGACTACCAGCGAGCTGAGGAGGAGGCGCTCACAAAACGGCAGCTTCTGGAGCAGTCGCTGAAGGACCTGGAGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp GCTCCTCAATCAGGGCTCCCTTCTCCCTGTCCTCGGATCGCTTGGTaGTGTCTAGCTCATCATGCATTTCCGACAGCTGGTCCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: APQSGLPSPCPRIAW*CLAHHAFPTAGPAG
Trigger: ACCTGCAGGACCAGCTGTCGGAAATGCATGATGAGCTAGACAGCACCAAGCGATCCGAGGACAGGGAGAAGGGAGCCCTGATTGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS CCA 90 bp GGAGCTCCTCAATCAGGGCTCCCTTCTCCCTGTCCTCGGATCGCTTaGTGCTGTCTAGCTCATCATGCATTTCCGACAGCTGGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: GAPQSGLPSPCPRIA*CCLAHHAFPTAGPA
Trigger: TGCAGGACCAGCTGTCGGAAATGCATGATGAGCTAGACAGCACCAAGCGATCCGAGGACAGGGAGAAGGGAGCCCTGATTGAGGAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS CCA 90 bp GATCTGGCTGGCGATAGTGCTGTCTTTGGGAAAGGCATAGCTCAGTaGGGCTTCGTAGAGGCTTCCCGCATCACTGCTGAGGTCGTCGTC +
Preference number: 5 (lower is better)
Translates to: DLAGDSAVFGKGIAQ*GFVEASRITAEVVV
Trigger: GACGACGACCTCAGCAGTGATGCGGGAAGCCTCTACGAAGCCCCACTGAGCTATGCCTTTCCCAAAGACAGCACTATCGCCAGCCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS-3UTR CAA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCCAGCTCTCTCCGAGCTaGCTCCAGCTCCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFAQLSPS*LQLLLQ
Trigger: CTGGAGAAGGAGCTGGAGCAAGCTCGGAGAGAGCTG...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS GCA 90 bp GGGGAAGCAGTTCCGGGACTTCTTACAGTTGGTCCCGTCCTCTGTTaGATTTCTCAGCCAGGGACTCTCGGGAGGGTGATGCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: GEAVPGLLTVGPVLC*ISQPGTLGRVMLLC
Trigger: GCAAAGAAGCATCACCCTCCCGAGAGTCCCTGGCTGAGAAATGCAACAGAGGACGGGACCAACTGTAAGAAGTCCCGGAACTGCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp CCCTTCTCCCTGTCCTCGGATCGCTTGGTGCTGTCTAGCTCATCATaGATTTCCGACAGCTGGTCCTGCAGGTCTCTGATCTCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: PFSLSSDRLVLSSSS*ISDSWSCRSLISVW
Trigger: CCAGACTGAGATCAGAGACCTGCAGGACCAGCTGTCGGAAATGCATGATGAGCTAGACAGCACCAAGCGATCCGAGGACAGGGAGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp TCTCCTTATACTCGCCCAGCTGCTTCTGCAGCTCCAAAGAGGATGTaGGGGAGGCCTCAGCAATGTCGGCCATCTCCTTCTGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SPYTRPAASAAPKRM*GRPQQCRPSPSAAS
Trigger: AGAAGCTGCAGAAGGAGATGGCCGACATTGCTGAGGCCTCCCGCACATCCTCTTTGGAGCTGCAGAAGCAGCTGGGCGAGTATAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 90 bp CGTTCTAGAACTCCATTCCTGCCCTCGTGGAGGGAGAACTGCTTCTaGCCTCTTAGCGGGCTGGTTTGCAGGTACGGGTTTTCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: RSRTPFLPSWRENCF*PLSGLVCRYGFSGS
Trigger: GCTTCCAGAAAACCCGTACCTGCAAACCAGCCCGCTAAGAGGCCAGAAGCAGTTCTCCCTCCACGAGGGCAGGAATGGAGTTCTAGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 90 bp GGGAACCGTAGGATTTGGGGAAGCAGTTCCGGGACTTCTTACAGTTaGTCCCGTCCTCTGTTGCATTTCTCAGCCAGGGACTCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: GNRRIWGSSSGTSYS*SRPLLHFSARDSRE
Trigger: CTCCCGAGAGTCCCTGGCTGAGAAATGCAACAGAGGACGGGACCAACTGTAAGAAGTCCCGGAACTGCTTCCCCAAATCCTACGGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 90 bp TTAGAACTTTCCAGTCGGTCGATCTCCTCTTCAGCCTCCTCCACCTaGCGCTTCATGGCTTTCAGGCGCAAGCTCAGCTGGTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LELSSRSISSSASST*RFMAFRRKLSWSFW
Trigger: CCAGAAGGACCAGCTGAGCTTGCGCCTGAAAGCCATGAAGCGCCAGGTGGAGGAGGCTGAAGAGGAGATCGACCGACTGGAAAGTTCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS-3UTR CAA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGACTCTGCTCTGAGGAGTaGCTCCTGCTGGCCAGGACC +
Preference number: 5 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGLCSEE*LLLART
Trigger: GGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGAG...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCCTCTGCTCTGAGGAGTaGCTCCTGCTGGCCAGGACC +
Preference number: 5 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSLCSEE*LLLART
Trigger: GGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGAG...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGCAGCTCTCTCCGAGCTaGCTCCAGCTCCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GASYITQLGQDLHMYPRLQLSPS*LQLLLQ
Trigger: CTGGAGAAGGAGCTGGAGCAAGCTCGGAGAGAGCTG...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGTTGCTGAGCTGCAGGTaGGCCCGATCCCTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GASYITQLGQDLHMYPRLLLSCR*ARSLSS
Trigger: TGAGGAGAGGGATCGGGCCAACCTGCAGCTCAGCAA...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACACCCTTCTTCAGAGAGTaGAGCTGCCCCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTPFFRE*SCPCSC
Trigger: GCAGCTGCAGGGGCAGCTCAACTCTCTGAAGAAGGG...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS TCA 90 bp TGGCCAGGACCTCAACATTCTTGGTTGCCTCCTCCACACTCTCCCTaGGGGCCTGCAGCTCAGCATCGTACTGTTCCTTCAGCTTATCCA +
Preference number: 5 (lower is better)
Translates to: WPGPQHSWLPPPHSP*GPAAQHRTVPSAYP
Trigger: TGGATAAGCTGAAGGAACAGTACGATGCTGAGCTGCAGGCCCTCAGGGAGAGTGTGGAGGAGGCAACCAAGAATGTTGAGGTCCTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS GCA 90 bp CATTCTCAATCAGGGCTCCCTTCTCCCTGTCCTCGGATCGCTTGGTaGTGTCTAGCTCATCATGCATTTCCGACAGCTGGTCCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: HSQSGLPSPCPRIAW*CLAHHAFPTAGPAG
Trigger: ACCTGCAGGACCAGCTGTCGGAAATGCATGATGAGCTAGACAGCACCAAGCGATCCGAGGACAGGGAGAAGGGAGCCCTGATTGAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121322.8
CDS CCA 90 bp TCGGATCGCTTGGTGCTGTCTAGCTCATCATGCATTTCCGACAGCTaGTCCTGCAGGTCTCTGATCTCAGTCTGGTGCTGTTCACGCTCC +
Preference number: 5 (lower is better)
Translates to: SDRLVLSSSSCISDS*SCRSLISVWCCSRS
Trigger: GGAGCGTGAACAGCACCAGACTGAGATCAGAGACCTGCAGGACCAGCTGTCGGAAATGCATGATGAGCTAGACAGCACCAAGCGATCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 90 bp CAGCATCGTACTGTTCCTTCAGCTTATCCATCTCCTGGTCATGGCTaGAAACCTCCTCCTTCAAGGCGCCCTTCAAGGCAGTCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: QHRTVPSAYPSPGHG*KPPPSRRPSRQSAP
Trigger: GGGAGCTGACTGCCTTGAAGGGCGCCTTGAAGGAGGAGGTTTCCAGCCATGACCAGGAGATGGATAAGCTGAAGGAACAGTACGATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS CCA 90 bp GCCTGCAGCTCAGCATCGTACTGTTCCTTCAGCTTATCCATCTCCTaGTCATGGCTGGAAACCTCCTCCTTCAAGGCGCCCTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: ACSSASYCSFSLSIS*SWLETSSFKAPFKA
Trigger: TGCCTTGAAGGGCGCCTTGAAGGAGGAGGTTTCCAGCCATGACCAGGAGATGGATAAGCTGAAGGAACAGTACGATGCTGAGCTGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS-3UTR CAA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACAGAGTGTCTCCTTTGCTaGGGCCTCGTCACCCTTCAC +
Preference number: 5 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTECLLC*GLVTLH
Trigger: GTGAAGGGTGACGAGGCCCAAGCAAAGGAGACACTC...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCAGCTTCTCGATGGTCTaGTCCAGGTGCCACCGCTCG +
Preference number: 5 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSSFSMV*SRCHRS
Trigger: CGAGCGGTGGCACCTGGACAAGACCATCGAGAAGCT...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS TCA 90 bp ATCAATTCCCTGGACCCTGATGCTGACACCATAGGAGCCTGCCTTTaGGGGCTGGGAATTCCTTGGCTTTGGAGTGTCACCACTGGCAAG +
Preference number: 5 (lower is better)
Translates to: INSLDPDADTIGACL*GLGIPWLWSVTTGK
Trigger: CTTGCCAGTGGTGACACTCCAAAGCCAAGGAATTCCCAGCCCTCAAAGGCAGGCTCCTATGGTGTCAGCATCAGGGTCCAGGGAATTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp TGGCCTCTTAGCGGGCTGGTTTGCAGGTACGGGTTTTCTGGAAGCTaGAGTTCCTCCGGAGTGTTCTCCTTCAACACGGTTCCATTGCTT +
Preference number: 5 (lower is better)
Translates to: WPLSGLVCRYGFSGS*SSSGVFSFNTVPLL
Trigger: AAGCAATGGAACCGTGTTGAAGGAGAACACTCCGGAGGAACTGCAGCTTCCAGAAAACCCGTACCTGCAAACCAGCCCGCTAAGAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp TCTTTGCGTTCTAGAACTCCATTCCTGCCCTCGTGGAGGGAGAACTaGTTCTGGCCTCTTAGCGGGCTGGTTTGCAGGTACGGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: SLRSRTPFLPSWREN*FWPLSGLVCRYGFS
Trigger: AGAAAACCCGTACCTGCAAACCAGCCCGCTAAGAGGCCAGAAGCAGTTCTCCCTCCACGAGGGCAGGAATGGAGTTCTAGAACGCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp CGCTTGGTGCTGTCTAGCTCATCATGCATTTCCGACAGCTGGTCCTaGAGGTCTCTGATCTCAGTCTGGTGCTGTTCACGCTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: RLVLSSSSCISDSWS*RSLISVWCCSRSIF
Trigger: GAAGATGGAGCGTGAACAGCACCAGACTGAGATCAGAGACCTGCAGGACCAGCTGTCGGAAATGCATGATGAGCTAGACAGCACCAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 90 bp AGCTCAGCATCGTACTGTTCCTTCAGCTTATCCATCTCCTGGTCATaGCTGGAAACCTCCTCCTTCAAGGCGCCCTTCAAGGCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: SSASYCSFSLSISWS*LETSSFKAPFKAVS
Trigger: GCTGACTGCCTTGAAGGGCGCCTTGAAGGAGGAGGTTTCCAGCCATGACCAGGAGATGGATAAGCTGAAGGAACAGTACGATGCTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS CCA 90 bp CAACATTCTCAATCAGGGCTCCCTTCTCCCTGTCCTCGGATCGCTTaGTGCTGTCTAGCTCATCATGCATTTCCGACAGCTGGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: QHSQSGLPSPCPRIA*CCLAHHAFPTAGPA
Trigger: TGCAGGACCAGCTGTCGGAAATGCATGATGAGCTAGACAGCACCAAGCGATCCGAGGACAGGGAGAAGGGAGCCCTGATTGAGAATGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGATGGTCCCGTCCTCTGTaGCATTTCTCAGCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGWSRPL*HFSARD
Trigger: GTCCCTGGCTGAGAAATGCAACAGAGGACGGGACCA...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACAAAGGTCCTGCTTGGCTaGCAGGAGCTCCTCAATCAG +
Preference number: 5 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTKVLLG*QELLNQ
Trigger: CTGATTGAGGAGCTCCTGCAAGCCAAGCAGGACCTT...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072899.9
CDS-3UTR CAA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCCGGCTGCGGTCATCCTaGAGGTGGCTCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPRLRSS*RWLLAS
Trigger: GGAGGCCAAGAGCCACCTCAAGGATGACCGCAGCCG...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCATTGCTGAGCTGCAGGTaGGCCCGATCCCTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: KADFELWILLLPLPVLGSLLSCR*ARSLSS
Trigger: TGAGGAGAGGGATCGGGCCAACCTGCAGCTCAGCAA...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTCGCTCCAGCCTTCGGTaGCTGAGCTGCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSRSSLR*LSCRLA
Trigger: GGCCAACCTGCAGCTCAGCAACCGAAGGCTGGAGCG...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCCGCTCCAGCCTTCGGTaGCTGAGCTGCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPRSSLR*LSCRLA
Trigger: GGCCAACCTGCAGCTCAGCAACCGAAGGCTGGAGCG...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS TCA 90 bp TCTGAACGTTCACGCACACTGAGGTCTGCTTTTGGGGGTCTTCTATaGCCACAGAGCTGCAGAGACGGATCGCTGTCATGTTGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: SERSRTLRSAFGGLL*PQSCRDGSLSCWSW
Trigger: CCAAGACCAACATGACAGCGATCCGTCTCTGCAGCTCTGTGGTCATAGAAGACCCCCAAAAGCAGACCTCAGTGTGCGTGAACGTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 90 bp GAAGAAGCTCGCTCCTCATCTGCTCCATCTGTTCCCTGCTCCACGTaGTCCTCTCCGACAGCAAGTCAGCGTTGGTTCTTTCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: EEARSSSAPSVPCST*SSPTASQRWFFLLP
Trigger: TGGAAGAAGAAAGAACCAACGCTGACTTGCTGTCGGAGAGGATCACGTGGAGCAGGGAACAGATGGAGCAGATGAGGAGCGAGCTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp TGCATTTCCGACAGCTGGTCCTGCAGGTCTCTGATCTCAGTCTGGTaGTGTTCACGCTCCATCTTCACTTGGAACAGCTCTTCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: CISDSWSCRSLISVW*CSRSIFTWNSSSKL
Trigger: GAGCTTGGAAGAGCTGTTCCAAGTGAAGATGGAGCGTGAACAGCACCAGACTGAGATCAGAGACCTGCAGGACCAGCTGTCGGAAATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp AGTCTGGCCTTTTCCACTTCCAGGCATTTCTCCTTCAGTTGTGTCTaGATTTCCGCAAGCTCCCGGCGGTTCTTCTCCTTATACTCGCCC +
Preference number: 5 (lower is better)
Translates to: SLAFSTSRHFSFSCV*ISASSRRFFSLYSP
Trigger: GGGCGAGTATAAGGAGAAGAACCGCCGGGAGCTTGCGGAAATGCAGACACAACTGAAGGAGAAATGCCTGGAAGTGGAAAAGGCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS-3UTR CAA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGTTCGTGGGCCCGTCTTaGCGTTCTAGAACTCCATTC +
Preference number: 5 (lower is better)
Translates to: GASYITQLGQDLHMYPRLFVGPS*RSRTPF
Trigger: GAATGGAGTTCTAGAACGCAAAGACGGGCCCACGAA...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCTTCCTGTCGTCGGGATaGATCCTGTTTCTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFAFLSSG*ILFLFP
Trigger: TGGGAAGAGAAACAGGATCAATCCCGACGACAGGAA...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS TCA 90 bp AATTGTAAAGGATCTGCTTGGCGGTCTCCTCGTTCGTTTGTTGTGTaGGCTCCTGCTGGCCCTTTAAGAGATCTGGTGTGGCCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: NCKGSAWRSPRSFVV*APAGPLRDLVWPEC
Trigger: GCACTCAGGCCACACCAGATCTCTTAAAGGGCCAGCAGGAGCTCACACAACAAACGAACGAGGAGACCGCCAAGCAGATCCTTTACAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 90 bp TCATGCATTTCCGACAGCTGGTCCTGCAGGTCTCTGATCTCAGTCTaGTGCTGTTCACGCTCCATCTTCACTTGGAACAGCTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: SCISDSWSCRSLISV*CCSRSIFTWNSSSK
Trigger: CTTGGAAGAGCTGTTCCAAGTGAAGATGGAGCGTGAACAGCACCAGACTGAGATCAGAGACCTGCAGGACCAGCTGTCGGAAATGCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS-3UTR CAA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCGGGTGCCTCTGGAAGTaGAGCACATGGGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPGCLWK*STWGSF
Trigger: GAAGCTGCCCCATGTGCTCAACTTCCAGAGGCACCC...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTTGGTCCCGTCCTCTGTaGCATTTCTCAGCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLWSRPL*HFSARD
Trigger: GTCCCTGGCTGAGAAATGCAACAGAGGACGGGACCA...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGAGAACTTTCCCATCTTaGTTCTGCAGGGGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: GASYITQLGQDLHMYPRLRTFPS*FCRGGL
Trigger: CAAGCCTCCCCTGCAGAACAAAGATGGGAAAGTTCT...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp AAGGCTGACTTTGAACTCTGGATCCTCCTGTTGCCACTTCCTGTGTTGGGATCAAGCTTGATTGCTTCCTaGGGCACTCCCTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: KADFELWILLLPLPVLGSSLIAS*GTPCCS
Trigger: AGAGCAGCAGGGAGTGCCCAAGGAAGCAATCAAGCT...TGATCCCAACACAGGAAGTGGCAACAGGAGGATCCAGAGTTCAAAGTCAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp GGGGCCTCCTATATAACCCAGCTTGGCCAAGACCTGCATATGTATCCAAGGCTGACGCTCCATCTTCACTaGGAACAGCTCTTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: GASYITQLGQDLHMYPRLTLHLH*EQLFQA
Trigger: AGCTTGGAAGAGCTGTTCCAAGTGAAGATGGAGCGT...CAGCCTTGGATACATATGCAGGTCTTGGCCAAGCTGGGTTATATAGGAGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACAACGCTCCATCTTCACTaGGAACAGCTCTTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTTLHLH*EQLFQA
Trigger: AGCTTGGAAGAGCTGTTCCAAGTGAAGATGGAGCGT...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCAGGACCTCAACATTCTaGGTTGCCTCCTCCACACTC +
Preference number: 5 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSRTSTF*VASSTL
Trigger: GAGTGTGGAGGAGGCAACCAAGAATGTTGAGGTCCT...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072899.9
CDS-3UTR CAA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCAGCTTCTCGATGGTCTaGTCCAGGTGCCACCGCTCG +
Preference number: 5 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPSFSMV*SRCHRS
Trigger: CGAGCGGTGGCACCTGGACAAGACCATCGAGAAGCT...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACTCCTTGAGGTGGCTCTaGGCCTCCAGCTCATACTCC +
Preference number: 5 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNSLRWL*ASSSYS
Trigger: GGAGTATGAGCTGGAGGCCAAGAGCCACCTCAAGGA...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTTCCTTGAGGTGGCTCTaGGCCTCCAGCTCATACTCC +
Preference number: 5 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLSLRWL*ASSSYS
Trigger: GGAGTATGAGCTGGAGGCCAAGAGCCACCTCAAGGA...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTCCCTTCTTCAGAGAGTaGAGCTGCCCCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSPFFRE*SCPCSC
Trigger: GCAGCTGCAGGGGCAGCTCAACTCTCTGAAGAAGGG...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS CCA 90 bp CCTGCTGAACTCGGTGAGGTATTCTGTGTTTCCCTGGAGACCAAATaGAAAGGCACTATCTACACTTCGGGATCTTTTCCTGTCGTCGGG +
Preference number: 5 (lower is better)
Translates to: PAELGEVFCVSLETK*KGTIYTSGSFPVVG
Trigger: CCCGACGACAGGAAAAGATCCCGAAGTGTAGATAGTGCCTTTCCATTTGGTCTCCAGGGAAACACAGAATACCTCACCGAGTTCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS-3UTR CAA 90 bp AAGATGTCATACTCGAAAGGCTCTGGAGCATCCTTAAGGAGAACAGCGGTCCTTGGTCCACACCAGGAATaGAGCAGGTGTCGATATCCC +
Preference number: 5 (lower is better)
Translates to: KMSYSKGSGASLRRTAVLGPHQE*SRCRYP
Trigger: GGGATATCGACACCTGCTCAATTCCTGGTGTGGACC...AAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGCCTTTCGAGTATGACATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp GAGGACTCTGCTCCAGTGTCCTGTCACCTCTGCCTTACACATAGGCAACTCACAGCATTTCTCCTTCAGTaGTGTCTGCATTTCCGCAAG +
Preference number: 5 (lower is better)
Translates to: EDSAPVSCHLCLTHRQLTAFLLQ*CLHFRK
Trigger: CTTGCGGAAATGCAGACACAACTGAAGGAGAAATGC...TGTGAGTTGCCTATGTGTAAGGCAGAGGTGACAGGACACTGGAGCAGAGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS TCA 90 bp GAAAGGCACTATCTACACTTCGGGATCTTTTCCTGTCGTCGGGATTaGTCCTGTTTCTCTTCCCAGACCTTCCTCTTCTCTGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: ERHYLHFGIFSCRRD*SCFSSQTFLFSEGQ
Trigger: CTGGCCTTCAGAGAAGAGGAAGGTCTGGGAAGAGAAACAGGATCAATCCCGACGACAGGAAAAGATCCCGAAGTGTAGATAGTGCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp GCTTCTTTTTCTTCCTTTCTGGCATGCACAAGGGCTTCCTCCAGCTaGTGTACTTCACTCTCACACTTTCGGAGTGTCTCCTTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: ASFSSFLACTRASSS*CTSLSHFRSVSFAW
Trigger: CCAAGCAAAGGAGACACTCCGAAAGTGTGAGAGTGAAGTACAGCAGCTGGAGGAAGCCCTTGTGCATGCCAGAAAGGAAGAAAAAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS-3UTR CAA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTAGGGCTGGGAATTCCTaGGCTTTGGAGTGTCACCAC +
Preference number: 5 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSRAGNS*ALECHH
Trigger: GTGGTGACACTCCAAAGCCAAGGAATTCCCAGCCCT...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACTTCGTGGGCCCGTCTTaGCGTTCTAGAACTCCATTC +
Preference number: 5 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDFVGPS*RSRTPF
Trigger: GAATGGAGTTCTAGAACGCAAAGACGGGCCCACGAA...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CACTGTCTGACCCCCTCTGGTTTCCAGAATAGCCTTCACTCTCCCTCCTTTGCCTTCACTGAAATTTTCTaGGCACCAGAATCCGATGTG +
Preference number: 5 (lower is better)
Translates to: HCLTPSGFQNSLHSPSFAFTEIF*APESDV
Trigger: CACATCGGATTCTGGTGCCAAGAAAATTTCAGTGAA...GGCAAAGGAGGGAGAGTGAAGGCTATTCTGGAAACCAGAGGGGGTCAGACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCGCATTTCTCCTTCAGTaGTGTCTGCATTTCCGCAAG +
Preference number: 5 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSAFLLQ*CLHFRK
Trigger: CTTGCGGAAATGCAGACACAACTGAAGGAGAAATGC...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp TCTGCCTTACACATAGGCAACTCACAAGGCTCTTTCATAGGTGACTGTCACAGTTTGTCCTCCATCTGCTaGATGAGTCGGCTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: SALHIGNSQGSFIGDCHSLSSIC*MSRLRS
Trigger: TGACCGCAGCCGACTCATCAAGCAGATGGAGGACAA...ACTGTGACAGTCACCTATGAAAGAGCCTTGTGAGTTGCCTATGTGTAAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp AAGAACGTCTCTGTATTCCTTCTTACATCAGCCCCATACCCACTTACTCATCCCTTGTCCTCCATCTGCTaGATGAGTCGGCTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: KNVSVFLLTSAPYPLTHPLSSIC*MSRLRS
Trigger: TGACCGCAGCCGACTCATCAAGCAGATGGAGGACAA...GGGATGAGTAAGTGGGTATGGGGCTGATGTAAGAAGGAATACAGAGACGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAACATAGGAGCCTGCCTTaGAGGGCTGGGAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKHRSLP*RAGNSL
Trigger: CAAGGAATTCCCAGCCCTCAAAGGCAGGCTCCTATG...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAAGGTCCACACCAGGAATaGAGCAGGTGTCGATATCCC +
Preference number: 5 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKGPHQE*SRCRYP
Trigger: GGGATATCGACACCTGCTCAATTCCTGGTGTGGACC...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp TCTGAATCTAGCTGTGTGAACTCTGACCTGCTGTGGACAGGACCTTATGGTAACTTCCTGTCGTCGGGATaGATCCTGTTTCTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SESSCVNSDLLWTGPYGNFLSSG*ILFLFP
Trigger: TGGGAAGAGAAACAGGATCAATCCCGACGACAGGAA...GTTACCATAAGGTCCTGTCCACAGCAGGTCAGAGTTCACACAGCTAGATTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACAGAACTTTCCCATCTTaGTTCTGCAGGGGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDRTFPS*FCRGGL
Trigger: CAAGCCTCCCCTGCAGAACAAAGATGGGAAAGTTCT...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CCCTTCAGATGGCAAGCACTCCCAATCCCTTTTCCCATCATTCCAAACTCCAGCCTCCTTGATGTTCTGTaGGTTCTTCATCTCCAGTTG +
Preference number: 5 (lower is better)
Translates to: PFRWQALPIPFPIIPNSSLLDVL*VLHLQL
Trigger: CAACTGGAGATGAAGAACCAACAGAACATCAAGGAG...GCTGGAGTTTGGAATGATGGGAAAAGGGATTGGGAGTGCTTGCCATCTGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAACGGCTGCGGTCATCCTaGAGGTGGCTCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKRLRSS*RWLLAS
Trigger: GGAGGCCAAGAGCCACCTCAAGGATGACCGCAGCCG...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CCATGGAGGAAAAGGGCCAAGGAGACACAACAACAGCGCTCTTGTCCTTTAGGACGGCTCTTTAAGTCTTaGTTCTGTCTCTCTAGGGAA +
Preference number: 5 (lower is better)
Translates to: PWRKRAKETQQQRSCPLGRLFKS*FCLSRE
Trigger: TTCCCTAGAGAGACAGAACAAAGACTTAAAGAGCCG...TCCTAAAGGACAAGAGCGCTGTTGTTGTGTCTCCTTGGCCCTTTTCCTCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS TCA 90 bp TCACTTTCCTTTTGGTGGCATCCTCATTGTCTGTGCCTCCTTCTTTaGGGTAATTGTAAAGGATCTGCTTGGCGGTCTCCTCGTTCGTTT +
Preference number: 5 (lower is better)
Translates to: SLSFWWHPHCLCLLL*GNCKGSAWRSPRSF
Trigger: AAACGAACGAGGAGACCGCCAAGCAGATCCTTTACAATTACCTCAAAGAAGGAGGCACAGACAATGAGGATGCCACCAAAAGGAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 90 bp TTATCACTGAAGATGGAAACGATGGCGCGTTTTCTGGGAAAGGTGTaGCTGCTAGACACCGCTCAGTGTTATTCAGGACTATATAAGGGT +
Preference number: 5 (lower is better)
Translates to: LSLKMETMARFLGKV*LLDTAQCYSGLYKG
Trigger: ACCCTTATATAGTCCTGAATAACACTGAGCGGTGTCTAGCAGGCACACCTTTCCCAGAAAACGCGCCATCGTTTCCATCTTCAGTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS-3UTR CAA 90 bp GCAGATGCTCATCCTTCAGATCCCTTCTCTGAATCTAGCTGTGTGAACTCTGACCAATTCAATCTCCAATaGGGACACCTTGTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: ADAHPSDPFSESSCVNSDQFNLQ*GHLVLH
Trigger: ATGGAGGACAAGGTGTCCCAATTGGAGATTGAATTG...GTCAGAGTTCACACAGCTAGATTCAGAGAAGGGATCTGAAGGATGAGCATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp TTCCAACTGTCATGGTGGAATGACACTCCAGAGCAGGAAAAACAAATTTATAAAGAGTGTCTCCTTTGCTaGGGCCTCGTCACCCTTCAC +
Preference number: 5 (lower is better)
Translates to: FQLSWWNDTPEQEKQIYKECLLC*GLVTLH
Trigger: GTGAAGGGTGACGAGGCCCAAGCAAAGGAGACACTC...TTTATAAATTTGTTTTTCCTGCTCTGGAGTGTCATTCCACCATGACAGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS GCA 90 bp CTTTCTCGCTCCTCCTTGATGTTCTGTTGGTTCTTCATCTCCAGTTaGAGTTGCTGCTGTAGTTCAGACACTTCTAGGATCAATTTGTTC +
Preference number: 5 (lower is better)
Translates to: LSRSSLMFCWFFISS*SCCCSSDTSRINLF
Trigger: GAACAAATTGATCCTAGAAGTGTCTGAACTACAGCAGCAACTGCAACTGGAGATGAAGAACCAACAGAACATCAAGGAGGAGCGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS-3UTR CAA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAACTCCTTGATGTTCTGTaGGTTCTTCATCTCCAGTTG +
Preference number: 5 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKLLDVL*VLHLQL
Trigger: CAACTGGAGATGAAGAACCAACAGAACATCAAGGAG...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAACAATTCAATCTCCAATaGGGACACCTTGTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKQFNLQ*GHLVLH
Trigger: ATGGAGGACAAGGTGTCCCAATTGGAGATTGAATTG...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS-3UTR CAA 90 bp CCATGGCTACCAGAAGGAACTGACTGGAATAAGGGCTGGCTAATTTTTGTCAAACGGCTCTTTAAGTCTTaGTTCTGTCTCTCTAGGGAA +
Preference number: 5 (lower is better)
Translates to: PWLPEGTDWNKGWLIFVKRLFKS*FCLSRE
Trigger: TTCCCTAGAGAGACAGAACAAAGACTTAAAGAGCCG...TTTGACAAAAATTAGCCAGCCCTTATTCCAGTCAGTTCCTTCTGGTAGCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
CDS GCA 72 bp GCGCCCTGCAGCTTTGCGGGCGGGCTGCTGGGACTGTaGTTCCCACGGTGCTCCTGGGCCACTGACCTCTGC +
Preference number: 6 (lower is better)
Translates to: APCSFAGGLLGL*FPRCSWATDLC
Trigger: GCAGAGGTCAGTGGCCCAGGAGCACCGTGGGAAGCACAGTCCCAGCAGCCCGCCCGCAAAGCTGCAGGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 90 bp TCTGCAGGGGAGGCTTGGGGTGGGCACCTTGAGCGCCCTGCAGCTTaGCGGGCGGGCTGCTGGGACTGTGCTTCCCACGGTGCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: SAGEAWGGHLERPAA*RAGCWDCASHGAPG
Trigger: CCCAGGAGCACCGTGGGAAGCACAGTCCCAGCAGCCCGCCCGCAAAGCTGCAGGGCGCTCAAGGTGCCCACCCCAAGCCTCCCCTGCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp AGGCTTGGGGTGGGCACCTTGAGCGCCCTGCAGCTTTaGGGGCGGGCTGCTGGGACTGTGCTTCCCACGGTG +
Preference number: 6 (lower is better)
Translates to: RLGVGTLSALQL*GRAAGTVLPTV
Trigger: CACCGTGGGAAGCACAGTCCCAGCAGCCCGCCCGCAAAGCTGCAGGGCGCTCAAGGTGCCCACCCCAAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp CACCTTGAGCGCCCTGCAGCTTTGCGGGCGGGCTGCTaGGACTGTGCTTCCCACGGTGCTCCTGGGCCACTG +
Preference number: 6 (lower is better)
Translates to: HLERPAALRAGC*DCASHGAPGPL
Trigger: CAGTGGCCCAGGAGCACCGTGGGAAGCACAGTCCCAGCAGCCCGCCCGCAAAGCTGCAGGGCGCTCAAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 72 bp ATCTTTGTTCTGCAGGGGAGGCTTGGGGTGGGCACCTaGAGCGCCCTGCAGCTTTGCGGGCGGGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: IFVLQGRLGVGT*SALQLCGRAAG
Trigger: CCCAGCAGCCCGCCCGCAAAGCTGCAGGGCGCTCAAGGTGCCCACCCCAAGCCTCCCCTGCAGAACAAAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp CGGTGCTCCTGGGCCACTGACCTCTGCGGGAAGACCTaGGATGGCCGAAGGAGGTGTTCGCTAGACTTGCCC +
Preference number: 6 (lower is better)
Translates to: RCSWATDLCGKT*DGRRRCSLDLP
Trigger: GGGCAAGTCTAGCGAACACCTCCTTCGGCCATCCCAGGTCTTCCCGCAGAGGTCAGTGGCCCAGGAGCACCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 72 bp ACCTTCCGCTCCAGCCTTCGGTTGCTGAGCTGCAGGTaGGCCCGATCCCTCTCCTCATTCTCCAGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: TFRSSLRLLSCR*ARSLSSFSSRS
Trigger: GGACCGGCTGGAGAATGAGGAGAGGGATCGGGCCAACCTGCAGCTCAGCAACCGAAGGCTGGAGCGGAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 90 bp AACTTTCCCATCTTTGTTCTGCAGGGGAGGCTTGGGGTGGGCACCTaGAGCGCCCTGCAGCTTTGCGGGCGGGCTGCTGGGACTGTGCTT +
Preference number: 6 (lower is better)
Translates to: NFPIFVLQGRLGVGT*SALQLCGRAAGTVL
Trigger: AAGCACAGTCCCAGCAGCCCGCCCGCAAAGCTGCAGGGCGCTCAAGGTGCCCACCCCAAGCCTCCCCTGCAGAACAAAGATGGGAAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 72 bp AGGGTCTCCTCTCCCACCCCCTCCTTGGCGCACCTCTaGACGTTCACGCACACTGAGGTCTGCTTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: RVSSPTPSLAHL*TFTHTEVCFWG
Trigger: CCCCCAAAAGCAGACCTCAGTGTGCGTGAACGTTCAGAGGTGCGCCAAGGAGGGGGTGGGAGAGGAGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp AGCACTTTCTCACGCAGGTCAGCCTCCGCCTGGCTCTaGTCTGAGGAGTTGCTCCTGCTGGCCAGGACCTCA +
Preference number: 6 (lower is better)
Translates to: STFSRRSASAWL*SEELLLLARTS
Trigger: TGAGGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGAGCCAGGCGGAGGCTGACCTGCGTGAGAAAGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp TCACATCCTCCATCTGCCTCTGTAGCTGGGCTGCCCTaGGCTCCAGCTCCGCAATCCTCCCCTGCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: SHPPSASVAGLP*APAPQSSPAAS
Trigger: AGAAGCTGCAGGGGAGGATTGCGGAGCTGGAGCGCAGGGCAGCCCAGCTACAGAGGCAGATGGAGGATGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp TGCTCCTGGGAGACCTGGCTCAGCTCTCTCCGAGCTTaGTCCAGCTCCTTCTCCAGCGCCCTTCTGGCACAT +
Preference number: 6 (lower is better)
Translates to: CSWETWLSSLRA*SSSFSSALLAH
Trigger: ATGTGCCAGAAGGGCGCTGGAGAAGGAGCTGGAGCAAGCTCGGAGAGAGCTGAGCCAGGTCTCCCAGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp TCCGCCTCGTCCCGGAGTTTCTCCAGGAGTTCCTTCTaGTCCTGGGAGACCTGGCTCAGCTCTCTCCGAGCT +
Preference number: 6 (lower is better)
Translates to: SASSRSFSRSSF*SWETWLSSLRA
Trigger: AGCTCGGAGAGAGCTGAGCCAGGTCTCCCAGGAGCAGAAGGAACTCCTGGAGAAACTCCGGGACGAGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp TCCAGCCGTCTCTGCAGGGTGGCCGTCTCCTCCACTTaGCTCTGGTGCCGGACTCGCAGCTCTTCTAAATCC +
Preference number: 6 (lower is better)
Translates to: SSRLCRVAVSST*LWCRTRSSSKS
Trigger: GGATTTAGAAGAGCTGCGAGTCCGGCACCAGAGCCAAGTGGAGGAGACGGCCACCCTGCAGAGACGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 90 bp GAGTTCCTTCTGCTCCTGGGAGACCTGGCTCAGCTCTCTCCGAGCTaGCTCCAGCTCCTTCTCCAGCGCCCTTCTGGCACATGTGGCTTC +
Preference number: 6 (lower is better)
Translates to: EFLLLLGDLAQLSPS*LQLLLQRPSGTCGF
Trigger: GAAGCCACATGTGCCAGAAGGGCGCTGGAGAAGGAGCTGGAGCAAGCTCGGAGAGAGCTGAGCCAGGTCTCCCAGGAGCAGAAGGAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp GCAGGTCAGCCTCCGCCTGGCTCTGCTCTGAGGAGTTaGTCCTGCTGGCCAGGACCTCAACATTCTTGGTTG +
Preference number: 6 (lower is better)
Translates to: AGQPPPGSALRS*SCWPGPQHSWL
Trigger: CAACCAAGAATGTTGAGGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGAGCCAGGCGGAGGCTGACCTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS GCA 72 bp CGCTCGCTCTCCATCTCGTTCTTCAGCTTTCGCAGCTaGTCCTTCTGCTCCGCCTCGTCCCGGAGTTTCTCC +
Preference number: 6 (lower is better)
Translates to: RSLSISFFSFRS*SFCSASSRSFS
Trigger: GGAGAAACTCCGGGACGAGGCGGAGCAGAAGGAGCAGCTGCGAAAGCTGAAGAACGAGATGGAGAGCGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp CAGCCTCCGCCTGGCTCTGCTCTGAGGAGTTGCTCCTaGTGGCCAGGACCTCAACATTCTCAATCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: QPPPGSALRSCS*WPGPQHSQSGL
Trigger: GAGCCCTGATTGAGAATGTTGAGGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGAGCCAGGCGGAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121322.8
CDS CCA 72 bp ACGAAGAGGACCTGCGTGACCGAGCTCCATCCAGGATaGGTCCTGCGGAATCTTGTCGCCGGAAGGGTAGCA +
Preference number: 6 (lower is better)
Translates to: TKRTCVTELHPG*VLRNLVAGRVA
Trigger: TGCTACCCTTCCGGCGACAAGATTCCGCAGGACCCATCCTGGATGGAGCTCGGTCACGCAGGTCCTCTTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp CGTCTCTGCAGGGTGGCCGTCTCCTCCACTTGGCTCTaGTGCCGGACTCGCAGCTCTTCTAAATCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: RLCRVAVSSTWL*CRTRSSSKSSL
Trigger: GAGAGAGGATTTAGAAGAGCTGCGAGTCCGGCACCAGAGCCAAGTGGAGGAGACGGCCACCCTGCAGAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp CCTCCGCCTGGCTCTGCTCTGAGGAGTTGCTCCTGCTaGCCAGGACCTCAACATTCTTGGTTGCCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PPPGSALRSCSC*PGPQHSWLPPP
Trigger: TGGAGGAGGCAACCAAGAATGTTGAGGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGAGCCAGGCGGAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS CCA 72 bp TCGTCCCGGAGTTTCTCCAGGAGTTCCTTCTGCTCCTaGGAGACCTGGCTCAGCTCTCTCCGAGCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: SSRSFSRSSFCS*ETWLSSLRACS
Trigger: GGAGCAAGCTCGGAGAGAGCTGAGCCAGGTCTCCCAGGAGCAGAAGGAACTCCTGGAGAAACTCCGGGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 90 bp ACTTTCTCACGCAGGTCAGCCTCCGCCTGGCTCTGCTCTGAGGAGTaGCTCCTGCTGGCCAGGACCTCAACATTCTTGGTTGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: TFSRRSASAWLCSEE*LLLARTSTFLVASS
Trigger: GGAGGAGGCAACCAAGAATGTTGAGGTCCTGGCCAGCAGGAGCAACTCCTCAGAGCAGAGCCAGGCGGAGGCTGACCTGCGTGAGAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS GCA 72 bp ACTCGCCCAGCTGCTTCTGCAGCTCCAAAGAGGATGTaGGGGAGGCCTCAGCAATGTCGGCCATCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: TRPAASAAPKRM*GRPQQCRPSPS
Trigger: AGAAGGAGATGGCCGACATTGCTGAGGCCTCCCGCACATCCTCTTTGGAGCTGCAGAAGCAGCTGGGCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp CGGCGGTTCTTCTCCTTATACTCGCCCAGCTGCTTCTaGAGCTCCAAAGAGGATGTGCGGGAGGCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: RRFFSLYSPSCF*SSKEDVREASA
Trigger: TGCTGAGGCCTCCCGCACATCCTCTTTGGAGCTGCAGAAGCAGCTGGGCGAGTATAAGGAGAAGAACCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp TGCAGAAGCTCCGGGTGCCTCTGGAAGTTGAGCACATaGGGCAGCTTCGTGGGCCCGTCTTTGCGTTCTAGA +
Preference number: 6 (lower is better)
Translates to: CRSSGCLWKLST*GSFVGPSLRSR
Trigger: TCTAGAACGCAAAGACGGGCCCACGAAGCTGCCCCATGTGCTCAACTTCCAGAGGCACCCGGAGCTTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp CTTGGTTTCAGAATAGGCCTGTGGGCTGGGGGCAGTTaGGGATTTCCGTCGAGGGGAAAGGGTCTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: LGFRIGLWAGGS*GFPSRGKGLLS
Trigger: GGAGAGGAGACCCTTTCCCCTCGACGGAAATCCCCAACTGCCCCCAGCCCACAGGCCTATTCTGAAACCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 90 bp TGCCTCTGGAAGTTGAGCACATGGGGCAGCTTCGTGGGCCCGTCTTaGCGTTCTAGAACTCCATTCCTGCCCTCGTGGAGGGAGAACTGC +
Preference number: 6 (lower is better)
Translates to: CLWKLSTWGSFVGPS*RSRTPFLPSWRENC
Trigger: GCAGTTCTCCCTCCACGAGGGCAGGAATGGAGTTCTAGAACGCAAAGACGGGCCCACGAAGCTGCCCCATGTGCTCAACTTCCAGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 90 bp CTCTGCGGGAAGACCTGGGATGGCCGAAGGAGGTGTTCGCTAGACTaGCCCAGGTTCCTGCTGAACTCGGTGAGGTATTCTGTGTTTCCC +
Preference number: 6 (lower is better)
Translates to: LCGKTWDGRRRCSLD*PRFLLNSVRYSVFP
Trigger: GGGAAACACAGAATACCTCACCGAGTTCAGCAGGAACCTGGGCAAGTCTAGCGAACACCTCCTTCGGCCATCCCAGGTCTTCCCGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 90 bp AGGAGCTCCTCAATCAGGGCTCCCTTCTCCCTGTCCTCGGATCGCTaGGTGCTGTCTAGCTCATCATGCATTTCCGACAGCTGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: RSSSIRAPFSLSSDR*VLSSSSCISDSWSC
Trigger: GCAGGACCAGCTGTCGGAAATGCATGATGAGCTAGACAGCACCAAGCGATCCGAGGACAGGGAGAAGGGAGCCCTGATTGAGGAGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS TCA 72 bp CAGGCGCAAGCTCAGCTGGTCCTTCTGGTCCGTCAGTaGCAGATGCTCATCATCCACCTGCATCACCAGCTC +
Preference number: 6 (lower is better)
Translates to: QAQAQLVLLVRQ*QMLIIHLHHQL
Trigger: GAGCTGGTGATGCAGGTGGATGATGAGCATCTGTCACTGACGGACCAGAAGGACCAGCTGAGCTTGCGCCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 72 bp TCAGTGGGGCTTCGTAGAGGCTTCCCGCATCACTGCTaGGGTCGTCGTCGTCCGAGTCGTCCAGTACTTTAC +
Preference number: 6 (lower is better)
Translates to: SVGLRRGFPHHC*GRRRPSRPVLY
Trigger: GTAAAGTACTGGACGACTCGGACGACGACGACCTCAGCAGTGATGCGGGAAGCCTCTACGAAGCCCCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp CTCTGCAGGGTGGCCGTCTCCTCCACTTGGCTCTGGTaGCGGACTCGCAGCTCTTCTAAATCCTCTCTCATT +
Preference number: 6 (lower is better)
Translates to: LCRVAVSSTWLW*RTRSSSKSSLI
Trigger: AATGAGAGAGGATTTAGAAGAGCTGCGAGTCCGGCACCAGAGCCAAGTGGAGGAGACGGCCACCCTGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp ACTCCATTCCTGCCCTCGTGGAGGGAGAACTGCTTCTaGCCTCTTAGCGGGCTGGTTTGCAGGTACGGGTTT +
Preference number: 6 (lower is better)
Translates to: TPFLPSWRENCF*PLSGLVCRYGF
Trigger: AAACCCGTACCTGCAAACCAGCCCGCTAAGAGGCCAGAAGCAGTTCTCCCTCCACGAGGGCAGGAATGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp CCGTCTTTGCGTTCTAGAACTCCATTCCTGCCCTCGTaGAGGGAGAACTGCTTCTGGCCTCTTAGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: PSLRSRTPFLPS*RENCFWPLSGL
Trigger: CAGCCCGCTAAGAGGCCAGAAGCAGTTCTCCCTCCACGAGGGCAGGAATGGAGTTCTAGAACGCAAAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp AGTTTCTCCAGGAGTTCCTTCTGCTCCTGGGAGACCTaGCTCAGCTCTCTCCGAGCTTGCTCCAGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SFSRSSFCSWET*LSSLRACSSSF
Trigger: GAAGGAGCTGGAGCAAGCTCGGAGAGAGCTGAGCCAGGTCTCCCAGGAGCAGAAGGAACTCCTGGAGAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp CAGCAATGTCGGCCATCTCCTTCTGCAGCTTCTCGATaGTCTTGTCCAGGTGCCACCGCTCGCTCTCCATCT +
Preference number: 6 (lower is better)
Translates to: QQCRPSPSAASR*SCPGATARSPS
Trigger: AGATGGAGAGCGAGCGGTGGCACCTGGACAAGACCATCGAGAAGCTGCAGAAGGAGATGGCCGACATTGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 72 bp AAGTTGAGCACATGGGGCAGCTTCGTGGGCCCGTCTTaGCGTTCTAGAACTCCATTCCTGCCCTCGTGGAGG +
Preference number: 6 (lower is better)
Translates to: KLSTWGSFVGPS*RSRTPFLPSWR
Trigger: CCTCCACGAGGGCAGGAATGGAGTTCTAGAACGCAAAGACGGGCCCACGAAGCTGCCCCATGTGCTCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 72 bp TCCTCCATCTGCTTGATGAGTCGGCTGCGGTCATCCTaGAGGTGGCTCTTGGCCTCCAGCTCATACTCCAGG +
Preference number: 6 (lower is better)
Translates to: SSICLMSRLRSS*RWLLASSSYSR
Trigger: CCTGGAGTATGAGCTGGAGGCCAAGAGCCACCTCAAGGATGACCGCAGCCGACTCATCAAGCAGATGGAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 72 bp CTGGACCCTGATGCTGACACCATAGGAGCCTGCCTTTaGGGGCTGGGAATTCCTTGGCTTTGGAGTGTCACC +
Preference number: 6 (lower is better)
Translates to: LDPDADTIGACL*GLGIPWLWSVT
Trigger: GGTGACACTCCAAAGCCAAGGAATTCCCAGCCCTCAAAGGCAGGCTCCTATGGTGTCAGCATCAGGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 72 bp CCTCAGCTCGCTGGTAGTCCTGCAACTCTTCCTCCTTaGGGCGTAACTCATCCTGCATCTTCGAGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: PQLAGSPATLPP*GVTHPASSRLP
Trigger: TGGCAGCCTCGAAGATGCAGGATGAGTTACGCCTCAAGGAGGAAGAGTTGCAGGACTACCAGCGAGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp AGGGAGAACTGCTTCTGGCCTCTTAGCGGGCTGGTTTaGAGGTACGGGTTTTCTGGAAGCTGCAGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: RENCFWPLSGLV*RYGFSGSCSSS
Trigger: GGAGGAACTGCAGCTTCCAGAAAACCCGTACCTGCAAACCAGCCCGCTAAGAGGCCAGAAGCAGTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp TCGTGGGCCCGTCTTTGCGTTCTAGAACTCCATTCCTaGCCTCGTGGAGGGAGAACTGCTTCTGGCCTCTTA +
Preference number: 6 (lower is better)
Translates to: SWARLCVLELHS*PRGGRTASGLL
Trigger: TAAGAGGCCAGAAGCAGTTCTCCCTCCACGAGGGCAGGAATGGAGTTCTAGAACGCAAAGACGGGCCCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp GTTCCGGGACTTCTTACAGTTGGTCCCGTCCTCTGTTaGATTTCTCAGCCAGGGACTCTCGGGAGGGTGATG +
Preference number: 6 (lower is better)
Translates to: VPGLLTVGPVLC*ISQPGTLGRVM
Trigger: CATCACCCTCCCGAGAGTCCCTGGCTGAGAAATGCAACAGAGGACGGGACCAACTGTAAGAAGTCCCGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp TCAGGGCTCCCTTCTCCCTGTCCTCGGATCGCTTGGTaGTGTCTAGCTCATCATGCATTTCCGACAGCTGGT +
Preference number: 6 (lower is better)
Translates to: SGLPSPCPRIAW*CLAHHAFPTAG
Trigger: ACCAGCTGTCGGAAATGCATGATGAGCTAGACAGCACCAAGCGATCCGAGGACAGGGAGAAGGGAGCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp CGTGGAGGGAGAACTGCTTCTGGCCTCTTAGCGGGCTaGTTTGCAGGTACGGGTTTTCTGGAAGCTGCAGTT +
Preference number: 6 (lower is better)
Translates to: RGGRTASGLLAG*FAGTGFLEAAV
Trigger: AACTGCAGCTTCCAGAAAACCCGTACCTGCAAACCAGCCCGCTAAGAGGCCAGAAGCAGTTCTCCCTCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp GTCGCCGGAAGGGTAGCACATCTGGCCTGTTTTTCTTaGTTTCAGAATAGGCCTGTGGGCTGGGGGCAGTTG +
Preference number: 6 (lower is better)
Translates to: VAGRVAHLACFS*FQNRPVGWGQL
Trigger: CAACTGCCCCCAGCCCACAGGCCTATTCTGAAACCAAGAAAAACAGGCCAGATGTGCTACCCTTCCGGCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp ACCTGGCGCTTCATGGCTTTCAGGCGCAAGCTCAGCTaGTCCTTCTGGTCCGTCAGTGACAGATGCTCATCA +
Preference number: 6 (lower is better)
Translates to: TWRFMAFRRKLS*SFWSVSDRCSS
Trigger: TGATGAGCATCTGTCACTGACGGACCAGAAGGACCAGCTGAGCTTGCGCCTGAAAGCCATGAAGCGCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp GGCGATAGTGCTGTCTTTGGGAAAGGCATAGCTCAGTaGGGCTTCGTAGAGGCTTCCCGCATCACTGCTGAG +
Preference number: 6 (lower is better)
Translates to: GDSAVFGKGIAQ*GFVEASRITAE
Trigger: CTCAGCAGTGATGCGGGAAGCCTCTACGAAGCCCCACTGAGCTATGCCTTTCCCAAAGACAGCACTATCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 72 bp GGATCTGCTTGGCGGTCTCCTCGTTCGTTTGTTGTGTaGGCTCCTGCTGGCCCTTTAAGAGATCTGGTGTGG +
Preference number: 6 (lower is better)
Translates to: GSAWRSPRSFVV*APAGPLRDLVW
Trigger: CCACACCAGATCTCTTAAAGGGCCAGCAGGAGCTCACACAACAAACGAACGAGGAGACCGCCAAGCAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 72 bp CGCTCCTCATCTGCTCCATCTGTTCCCTGCTCCACGTaGTCCTCTCCGACAGCAAGTCAGCGTTGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: RSSSAPSVPCST*SSPTASQRWFF
Trigger: AAAGAACCAACGCTGACTTGCTGTCGGAGAGGATCACGTGGAGCAGGGAACAGATGGAGCAGATGAGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp AGCGGGCTGGTTTGCAGGTACGGGTTTTCTGGAAGCTaGAGTTCCTCCGGAGTGTTCTCCTTCAACACGGTT +
Preference number: 6 (lower is better)
Translates to: SGLVCRYGFSGS*SSSGVFSFNTV
Trigger: AACCGTGTTGAAGGAGAACACTCCGGAGGAACTGCAGCTTCCAGAAAACCCGTACCTGCAAACCAGCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp AAGCTCAGCTGGTCCTTCTGGTCCGTCAGTGACAGATaGTCATCATCCACCTGCATCACCAGCTCCTTCACC +
Preference number: 6 (lower is better)
Translates to: KLSWSFWSVSDR*SSSTCITSSFT
Trigger: GGTGAAGGAGCTGGTGATGCAGGTGGATGATGAGCATCTGTCACTGACGGACCAGAAGGACCAGCTGAGCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp TCCGACAGCTGGTCCTGCAGGTCTCTGATCTCAGTCTaGTGCTGTTCACGCTCCATCTTCACTTGGAACAGC +
Preference number: 6 (lower is better)
Translates to: SDSWSCRSLISV*CCSRSIFTWNS
Trigger: GCTGTTCCAAGTGAAGATGGAGCGTGAACAGCACCAGACTGAGATCAGAGACCTGCAGGACCAGCTGTCGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp CAATCAGGGCTCCCTTCTCCCTGTCCTCGGATCGCTTaGTGCTGTCTAGCTCATCATGCATTTCCGACAGCT +
Preference number: 6 (lower is better)
Translates to: QSGLPSPCPRIA*CCLAHHAFPTA
Trigger: AGCTGTCGGAAATGCATGATGAGCTAGACAGCACCAAGCGATCCGAGGACAGGGAGAAGGGAGCCCTGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 72 bp TCAATCAGGGCTCCCTTCTCCCTGTCCTCGGATCGCTaGGTGCTGTCTAGCTCATCATGCATTTCCGACAGC +
Preference number: 6 (lower is better)
Translates to: SIRAPFSLSSDR*VLSSSSCISDS
Trigger: GCTGTCGGAAATGCATGATGAGCTAGACAGCACCAAGCGATCCGAGGACAGGGAGAAGGGAGCCCTGATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 90 bp CCTCCAGCTGCTGTACTTCACTCTCACACTTTCGGAGTGTCTCCTTaGCTTGGGCCTCGTCACCCTTCACATCCTCCATCTGCCTCTGTA +
Preference number: 6 (lower is better)
Translates to: PPAAVLHSHTFGVSP*LGPRHPSHPPSASV
Trigger: TACAGAGGCAGATGGAGGATGTGAAGGGTGACGAGGCCCAAGCAAAGGAGACACTCCGAAAGTGTGAGAGTGAAGTACAGCAGCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 90 bp TCAACATTCTCAATCAGGGCTCCCTTCTCCCTGTCCTCGGATCGCTaGGTGCTGTCTAGCTCATCATGCATTTCCGACAGCTGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: STFSIRAPFSLSSDR*VLSSSSCISDSWSC
Trigger: GCAGGACCAGCTGTCGGAAATGCATGATGAGCTAGACAGCACCAAGCGATCCGAGGACAGGGAGAAGGGAGCCCTGATTGAGAATGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121322.8
CDS TCA 72 bp TCACGCACACTGAGGTCTGCTTTTGGGGGTCTTCTATaGCCACAGAGCTGCAGAGACGGATCGCTGTCATGT +
Preference number: 6 (lower is better)
Translates to: SRTLRSAFGGLL*PQSCRDGSLSC
Trigger: ACATGACAGCGATCCGTCTCTGCAGCTCTGTGGTCATAGAAGACCCCCAAAAGCAGACCTCAGTGTGCGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp GACAGCTGGTCCTGCAGGTCTCTGATCTCAGTCTGGTaGTGTTCACGCTCCATCTTCACTTGGAACAGCTCT +
Preference number: 6 (lower is better)
Translates to: DSWSCRSLISVW*CSRSIFTWNSS
Trigger: AGAGCTGTTCCAAGTGAAGATGGAGCGTGAACAGCACCAGACTGAGATCAGAGACCTGCAGGACCAGCTGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp CTGTCTAGCTCATCATGCATTTCCGACAGCTGGTCCTaGAGGTCTCTGATCTCAGTCTGGTGCTGTTCACGC +
Preference number: 6 (lower is better)
Translates to: LSSSSCISDSWS*RSLISVWCCSR
Trigger: GCGTGAACAGCACCAGACTGAGATCAGAGACCTGCAGGACCAGCTGTCGGAAATGCATGATGAGCTAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp TCCTGCAACTCTTCCTCCTTGAGGCGTAACTCATCCTaGATCTTCGAGGCTGCCAGTCTGGCCTTTTCCACT +
Preference number: 6 (lower is better)
Translates to: SCNSSSLRRNSS*IFEAASLAFST
Trigger: AGTGGAAAAGGCCAGACTGGCAGCCTCGAAGATGCAGGATGAGTTACGCCTCAAGGAGGAAGAGTTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp AGGATTTGGGGAAGCAGTTCCGGGACTTCTTACAGTTaGTCCCGTCCTCTGTTGCATTTCTCAGCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: RIWGSSSGTSYS*SRPLLHFSARD
Trigger: GTCCCTGGCTGAGAAATGCAACAGAGGACGGGACCAACTGTAAGAAGTCCCGGAACTGCTTCCCCAAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp ACTGTTCCTTCAGCTTATCCATCTCCTGGTCATGGCTaGAAACCTCCTCCTTCAAGGCGCCCTTCAAGGCAG +
Preference number: 6 (lower is better)
Translates to: TVPSAYPSPGHG*KPPPSRRPSRQ
Trigger: CTGCCTTGAAGGGCGCCTTGAAGGAGGAGGTTTCCAGCCATGACCAGGAGATGGATAAGCTGAAGGAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS CCA 72 bp TCAGCATCGTACTGTTCCTTCAGCTTATCCATCTCCTaGTCATGGCTGGAAACCTCCTCCTTCAAGGCGCCC +
Preference number: 6 (lower is better)
Translates to: SASYCSFSLSIS*SWLETSSFKAP
Trigger: GGGCGCCTTGAAGGAGGAGGTTTCCAGCCATGACCAGGAGATGGATAAGCTGAAGGAACAGTACGATGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS CAA 72 bp GCCTTCAGAGGGAGAATTCGGAGCTTGATTGCTTCCTaGGGCACTCCCTGCTGCTCTGGACTTCAAAGTCTG +
Preference number: 6 (lower is better)
Translates to: AFRGRIRSLIAS*GTPCCSGLQSL
Trigger: CAGACTTTGAAGTCCAGAGCAGCAGGGAGTGCCCAAGGAAGCAATCAAGCTCCGAATTCTCCCTCTGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 72 bp TTTGGCAATGAGCAGATCTTGAAGGTCCTGCTTGGCTaGCAGGAGCTCCTCAATCAGGGCTCCCTTCTCCCT +
Preference number: 6 (lower is better)
Translates to: FGNEQILKVLLG*QELLNQGSLLP
Trigger: AGGGAGAAGGGAGCCCTGATTGAGGAGCTCCTGCAAGCCAAGCAGGACCTTCAAGATCTGCTCATTGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS CAA 90 bp GGGTCTTCTATGACCACAGAGCTGCAGAGACGGATCGCTGTCATGTaGGTCTTGGCTAAATCTTCCGAAGTAGGGCTGTTGGGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: GSSMTTELQRRIAVM*VLAKSSEVGLLGWE
Trigger: TTCCCAGCCCAACAGCCCTACTTCGGAAGATTTAGCCAAGACCAACATGACAGCGATCCGTCTCTGCAGCTCTGTGGTCATAGAAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 90 bp GGCTGCCAGTCTGGCCTTTTCCACTTCCAGGCATTTCTCCTTCAGTaGTGTCTGCATTTCCGCAAGCTCCCGGCGGTTCTTCTCCTTATA +
Preference number: 6 (lower is better)
Translates to: GCQSGLFHFQAFLLQ*CLHFRKLPAVLLLI
Trigger: TATAAGGAGAAGAACCGCCGGGAGCTTGCGGAAATGCAGACACAACTGAAGGAGAAATGCCTGGAAGTGGAAAAGGCCAGACTGGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 72 bp AATAGACTGTTGCCTTCAGAGGGAGAATTCGGAGCTTaGTTGCTTCCTTGGGCACTCCCTGCTGCTCTGGAC +
Preference number: 6 (lower is better)
Translates to: NRLLPSEGEFGA*LLPWALPAALD
Trigger: GTCCAGAGCAGCAGGGAGTGCCCAAGGAAGCAATCAAGCTCCGAATTCTCCCTCTGAAGGCAACAGTCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp TCACCACTGGCAAGTCTCAGGTGTACCCCGTACTCCTaGTGTACGTGTTGGTATTCGCCAAAATACAGCTCC +
Preference number: 6 (lower is better)
Translates to: SPLASLRCTPYS*CTCWYSPKYSS
Trigger: GGAGCTGTATTTTGGCGAATACCAACACGTACAGCAGGAGTACGGGGTACACCTGAGACTTGCCAGTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp CTGTACTTCACTCTCACACTTTCGGAGTGTCTCCTTTaGTTGGGCCTCGTCACCCTTCACATCCTCCATCTG +
Preference number: 6 (lower is better)
Translates to: LYFTLTLSECLL*LGLVTLHILHL
Trigger: CAGATGGAGGATGTGAAGGGTGACGAGGCCCAAGCAAAGGAGACACTCCGAAAGTGTGAGAGTGAAGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp TCTTCCTTTCTGGCATGCACAAGGGCTTCCTCCAGCTaGTGTACTTCACTCTCACACTTTCGGAGTGTCTCC +
Preference number: 6 (lower is better)
Translates to: SSFLACTRASSS*CTSLSHFRSVS
Trigger: GGAGACACTCCGAAAGTGTGAGAGTGAAGTACAGCAGCTGGAGGAAGCCCTTGTGCATGCCAGAAAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp TTGGTGCTGTCTAGCTCATCATGCATTTCCGACAGCTaGTCCTGCAGGTCTCTGATCTCAGTCTGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: LVLSSSSCISDS*SCRSLISVWCC
Trigger: ACAGCACCAGACTGAGATCAGAGACCTGCAGGACCAGCTGTCGGAAATGCATGATGAGCTAGACAGCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp TCGTACTGTTCCTTCAGCTTATCCATCTCCTGGTCATaGCTGGAAACCTCCTCCTTCAAGGCGCCCTTCAAG +
Preference number: 6 (lower is better)
Translates to: SYCSFSLSISWS*LETSSFKAPFK
Trigger: CTTGAAGGGCGCCTTGAAGGAGGAGGTTTCCAGCCATGACCAGGAGATGGATAAGCTGAAGGAACAGTACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS CAA 72 bp TTCTCAGCCAGGGACTCTCGGGAGGGTGATGCTTCTTaGCGTTCACCTCATTCTTTTCTGGGTCATAGGGCT +
Preference number: 6 (lower is better)
Translates to: FSARDSREGDAS*RSPHSFLGHRA
Trigger: AGCCCTATGACCCAGAAAAGAATGAGGTGAACGCAAAGAAGCATCACCCTCCCGAGAGTCCCTGGCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 72 bp GCTGTACTTCACTCTCACACTTTCGGAGTGTCTCCTTaGCTTGGGCCTCGTCACCCTTCACATCCTCCATCT +
Preference number: 6 (lower is better)
Translates to: AVLHSHTFGVSP*LGPRHPSHPPS
Trigger: AGATGGAGGATGTGAAGGGTGACGAGGCCCAAGCAAAGGAGACACTCCGAAAGTGTGAGAGTGAAGTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 72 bp TCTGGCCTTTTCCACTTCCAGGCATTTCTCCTTCAGTaGTGTCTGCATTTCCGCAAGCTCCCGGCGGTTCTT +
Preference number: 6 (lower is better)
Translates to: SGLFHFQAFLLQ*CLHFRKLPAVL
Trigger: AAGAACCGCCGGGAGCTTGCGGAAATGCAGACACAACTGAAGGAGAAATGCCTGGAAGTGGAAAAGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 90 bp CTGTTGCATTTCTCAGCCAGGGACTCTCGGGAGGGTGATGCTTCTTaGCGTTCACCTCATTCTTTTCTGGGTCATAGGGCTGCAGAAGCT +
Preference number: 6 (lower is better)
Translates to: LLHFSARDSREGDAS*RSPHSFLGHRAAEA
Trigger: AGCTTCTGCAGCCCTATGACCCAGAAAAGAATGAGGTGAACGCAAAGAAGCATCACCCTCCCGAGAGTCCCTGGCTGAGAAATGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 72 bp ATGACCACAGAGCTGCAGAGACGGATCGCTGTCATGTaGGTCTTGGCTAAATCTTCCGAAGTAGGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: MTTELQRRIAVM*VLAKSSEVGLL
Trigger: CAACAGCCCTACTTCGGAAGATTTAGCCAAGACCAACATGACAGCGATCCGTCTCTGCAGCTCTGTGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 72 bp AGATCTTCCTGTTCCTCTTTGGCAATGAGCAGATCTTaGAGGTCCTGCTTGGCTTGCAGGAGCTCCTCAATC +
Preference number: 6 (lower is better)
Translates to: RSSCSSLAMSRS*RSCLACRSSSI
Trigger: GATTGAGGAGCTCCTGCAAGCCAAGCAGGACCTTCAAGATCTGCTCATTGCCAAAGAGGAACAGGAAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS TCA 72 bp TTGTCACACTCTAAGTCTTGCTTGGCAGCTTTCTCCTaGAGAAGCTCGCTCCTCATCTGCTCCATCTGTTCC +
Preference number: 6 (lower is better)
Translates to: LSHSKSCLAAFS*RSSLLICSICS
Trigger: GGAACAGATGGAGCAGATGAGGAGCGAGCTTCTTCAGGAGAAAGCTGCCAAGCAAGACTTAGAGTGTGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp AAGATGGAAACGATGGCGCGTTTTCTGGGAAAGGTGTaGCTGCTAGACACCGCTCAGTGTTATTCAGGACTA +
Preference number: 6 (lower is better)
Translates to: KMETMARFLGKV*LLDTAQCYSGL
Trigger: TAGTCCTGAATAACACTGAGCGGTGTCTAGCAGGCACACCTTTCCCAGAAAACGCGCCATCGTTTCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 72 bp GAGATCTTCCTGTTCCTCTTTGGCAATGAGCAGATCTaGAAGGTCCTGCTTGGCTTGCAGGAGCTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: EIFLFLFGNEQI*KVLLGLQELLN
Trigger: ATTGAGGAGCTCCTGCAAGCCAAGCAGGACCTTCAAGATCTGCTCATTGCCAAAGAGGAACAGGAAGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072899.9
ENSMUST00000122065.2
CDS CAA 72 bp CTTTCTTCTTCCAATTCAATCTCCAATTGGGACACCTaGTCCTCCATCTGCTTGATGAGTCGGCTGCGGTCA +
Preference number: 6 (lower is better)
Translates to: LSSSNSISNWDT*SSICLMSRLRS
Trigger: TGACCGCAGCCGACTCATCAAGCAGATGGAGGACAAGGTGTCCCAATTGGAGATTGAATTGGAAGAAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 90 bp CAGGCTTTTGGTCAAATTTTTCAATTAACTGGTCCACACCAGGAATaGAGCAGGTGTCGATATCCCGCCCAGTTCCTGGCAAGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: QAFGQIFQLTGPHQE*SRCRYPAQFLARRE
Trigger: TTCCCTTCTTGCCAGGAACTGGGCGGGATATCGACACCTGCTCAATTCCTGGTGTGGACCAGTTAATTGAAAAATTTGACCAAAAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 72 bp TTTTGGTGGCATCCTCATTGTCTGTGCCTCCTTCTTTaGGGTAATTGTAAAGGATCTGCTTGGCGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: FWWHPHCLCLLL*GNCKGSAWRSP
Trigger: AGGAGACCGCCAAGCAGATCCTTTACAATTACCTCAAAGAAGGAGGCACAGACAATGAGGATGCCACCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 72 bp CCTCCGGAGTGTTCTCCTTCAACACGGTTCCATTGCTaGGATGTAGGGACAGGTTATTTATCACTGAAGATG +
Preference number: 6 (lower is better)
Translates to: PPECSPSTRFHC*DVGTGYLSLKM
Trigger: CATCTTCAGTGATAAATAACCTGTCCCTACATCCAAGCAATGGAACCGTGTTGAAGGAGAACACTCCGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp TCCTCCTTGATGTTCTGTTGGTTCTTCATCTCCAGTTaGAGTTGCTGCTGTAGTTCAGACACTTCTAGGATC +
Preference number: 6 (lower is better)
Translates to: SSLMFCWFFISS*SCCCSSDTSRI
Trigger: GATCCTAGAAGTGTCTGAACTACAGCAGCAACTGCAACTGGAGATGAAGAACCAACAGAACATCAAGGAGGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CCA 72 bp TCTCTCATTCTTTCTCGCTCCTCCTTGATGTTCTGTTaGTTCTTCATCTCCAGTTGCAGTTGCTGCTGTAGT +
Preference number: 6 (lower is better)
Translates to: SLILSRSSLMFC*FFISSCSCCCS
Trigger: ACTACAGCAGCAACTGCAACTGGAGATGAAGAACCAACAGAACATCAAGGAGGAGCGAGAAAGAATGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS CAA 72 bp AGTTCCTCCGGAGTGTTCTCCTTCAACACGGTTCCATaGCTTGGATGTAGGGACAGGTTATTTATCACTGAA +
Preference number: 6 (lower is better)
Translates to: SSSGVFSFNTVP*LGCRDRLFITE
Trigger: TTCAGTGATAAATAACCTGTCCCTACATCCAAGCAATGGAACCGTGTTGAAGGAGAACACTCCGGAGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp CTAGGATCAATTTGTTCTTCTGATCCAATAGACTGTTaGCTTCAGAGGGAGAATTCGGAGCTTGATTGCTTC +
Preference number: 6 (lower is better)
Translates to: LGSICSSDPIDC*LQRENSELDCF
Trigger: GAAGCAATCAAGCTCCGAATTCTCCCTCTGAAGGCAACAGTCTATTGGATCAGAAGAACAAATTGATCCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp ATGTTCTGTTGGTTCTTCATCTCCAGTTGCAGTTGCTaGTGTAGTTCAGACACTTCTAGGATCAATTTGTTC +
Preference number: 6 (lower is better)
Translates to: MFCWFFISSCSC*CSSDTSRINLF
Trigger: GAACAAATTGATCCTAGAAGTGTCTGAACTACAGCAGCAACTGCAACTGGAGATGAAGAACCAACAGAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS GCA 72 bp TTGATGTTCTGTTGGTTCTTCATCTCCAGTTGCAGTTaGTGCTGTAGTTCAGACACTTCTAGGATCAATTTG +
Preference number: 6 (lower is better)
Translates to: LMFCWFFISSCS*CCSSDTSRINL
Trigger: CAAATTGATCCTAGAAGTGTCTGAACTACAGCAGCAACTGCAACTGGAGATGAAGAACCAACAGAACATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2
CDS TCA 72 bp TGTAGTTCAGACACTTCTAGGATCAATTTGTTCTTCTaGTCCAATAGACTGTTGCCTTCAGAGGGAGAATTC +
Preference number: 6 (lower is better)
Translates to: CSSDTSRINLFF*SNRLLPSEGEF
Trigger: GAATTCTCCCTCTGAAGGCAACAGTCTATTGGATCAGAAGAACAAATTGATCCTAGAAGTGTCTGAACTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072899.9
ENSMUST00000121322.8
ENSMUST00000122065.2