Pregenerated sensors for CGAS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032344Ensembl transcript IDs: ENSMUST00000034898.14, ENSMUST00000070742.14, ENSMUST00000127190.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGATGTCCATCTGTCATCCCAGAGTTGGGGCAGCAGAGGCAGCTaGATCCCAGGAGTTCACTGGCTAATCAGCCCGGACACCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: GDVHLSSQSWGSRGS*IPGVHWLISPDTSL Trigger: CAGGGAGGTGTCCGGGCTGATTAGCCAGTGAACTCCTGGGATTCAGCTGCCTCTGCTGCCCCAACTCTGGGATGACAGATGGACATCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR GCA 90 bp | AAAGAGGAAATGAGCATCAGCTGCCCCTGGGGAACGCTGCTTGGATaGAGACGAGAGTATCCTCTGTCCCACACCCATCTCGCTGCGCTG | + |
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Preference number: 1 (lower is better) Translates to: KEEMSISCPWGTLLG*RREYPLSHTHLAAL Trigger: CAGCGCAGCGAGATGGGTGTGGGACAGAGGATACTCTCGTCTGCATCCAAGCAGCGTTCCCCAGGGGCAGCTGATGCTCATTTCCTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
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| 3UTR GCA 90 bp | ACTAGATTCCCTGGAACCAGAGTTACAGTTGTGCCTGCCACTGGATaGTGGGAACCAACCCAGGCCCTCCGGAAGAGCAATAAGTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: TRFPGTRVTVVPATG*WEPTQALRKSNKCC Trigger: ACAGCACTTATTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCCAGGGAATCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR GCA 90 bp | GCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTaGTATGATGACAACAGACTAAATCTCCGAACCTATAAACCAGCC | + |
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Preference number: 1 (lower is better) Translates to: ATSPVLCPPGCCHAS*YDDNRLNLRTYKPA Trigger: GGCTGGTTTATAGGTTCGGAGATTTAGTCTGTTGTCATCATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR GCA 90 bp | GTAGAACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTaGCACGCTTCCTGCTATGATGACAACAGACTAAATCTCCGAACC | + |
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Preference number: 1 (lower is better) Translates to: VELSATSPVLCPPGC*HASCYDDNRLNLRT Trigger: GGTTCGGAGATTTAGTCTGTTGTCATCATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAGTTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR CCA 90 bp | GGTCCCACTGACTGTCCTGCGGGTCCTGGGTCCACATGTGAAAGATaGCAGTTTTCACATGGTAGGAACAGAATGCATCCAGCTCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: GPTDCPAGPGSTCER*QFSHGRNRMHPALE Trigger: TTCAAGAGCTGGATGCATTCTGTTCCTACCATGTGAAAACTGCCATCTTTCACATGTGGACCCAGGACCCGCAGGACAGTCAGTGGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000127190.2 |
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| 3UTR GCA 90 bp | CCTTTGGATGAAGATGTAGAACTCTCAGCTACTTCTCCAGTGCTCTaGCCTCCTGGATGCTGCCACGCTTCCTGCTATGATGACAACAGA | + |
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Preference number: 1 (lower is better) Translates to: PLDEDVELSATSPVL*PPGCCHASCYDDNR Trigger: TCTGTTGTCATCATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAGTTCTACATCTTCATCCAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR CCA 90 bp | ATTCCAATGGCAGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCTaGTCTACAGAGGGAGTTACAAGACAGCCAGGACTACACAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: IPMAEAGRSLCSRPA*STEGVTRQPGLHRN Trigger: GTTTCTGTGTAGTCCTGGCTGTCTTGTAACTCCCTCTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCTGCCATTGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR GCA 90 bp | GCTGGCCTTGCATTCATGGCAACCGTCACATCTCAGCTTCTCAAGTaGCAGGATTATAATGAAGTGCTAGCACACTTATCATATTATGGG | + |
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Preference number: 1 (lower is better) Translates to: AGLAFMATVTSQLLK*QDYNEVLAHLSYYG Trigger: CCCATAATATGATAAGTGTGCTAGCACTTCATTATAATCCTGGCACTTGAGAAGCTGAGATGTGACGGTTGCCATGAATGCAAGGCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| 3UTR CCA 90 bp | TTTAAACAAGATTGTATTTTATATCCCAGGCTGGCCTTGCATTCATaGCAACCGTCACATCTCAGCTTCTCAAGTGCCAGGATTATAATG | + |
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Preference number: 1 (lower is better) Translates to: FKQDCILYPRLALHS*QPSHLSFSSARIIM Trigger: CATTATAATCCTGGCACTTGAGAAGCTGAGATGTGACGGTTGCCATGAATGCAAGGCCAGCCTGGGATATAAAATACAATCTTGTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| 3UTR TCA 90 bp | CCTTCTACCTTAGGACAGAGGAGGCGGCAGTGCATTTCTTGTGTTTaGACAAATTCTAAATCAACTATTTCCAATACAATCTCTCACAAC | + |
|
Preference number: 1 (lower is better) Translates to: PSTLGQRRRQCISCV*TNSKSTISNTISHN Trigger: GTTGTGAGAGATTGTATTGGAAATAGTTGATTTAGAATTTGTTCAAACACAAGAAATGCACTGCCGCCTCCTCTGTCCTAAGGTAGAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
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| 3UTR-3UTR GCA 90 bp | AGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAAGTGCCTGCCACTGGATaGTGGGAACCAACCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SCACHWMLGTNPGPPEEQVPATG*WEPTQA Trigger: GGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCAC...TTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAATAAGTGCGGCAGCAGAGGCAGCTaGATCCCAGGAGTTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: PATGCWEPTQALRKSNKCGSRGS*IPGVHW Trigger: CCAGTGAACTCCTGGGATTCAGCTGCCTCTGCTGCC...GCACTTATTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCCTCTGCCCTCCTGGATaGTGCCACGCTTCCTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: TVVPATGCWEPTQALRKSLCPPG*CHASCY Trigger: ATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAG...GCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR TCA 90 bp | AACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTGGCAGCAGAGGCAGCTaGATCCCAGGAGTTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: NSQLLLQCSALLDAATLPGSRGS*IPGVHW Trigger: CCAGTGAACTCCTGGGATTCAGCTGCCTCTGCTGCC...AGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAATAAGTGCCCTCCTGGATGCTaGCACGCTTCCTGCTATGAT | + |
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Preference number: 2 (lower is better) Translates to: VPATGCWEPTQALRKSNKCPPGC*HASCYD Trigger: ATCATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCA...CTTATTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAATAAGCAGCTACTTCTCCAGTaGTCTGCCCTCCTGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: VPATGCWEPTQALRKSNKQLLLQ*SALLDA Trigger: AGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTG...CTTATTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR GCA 90 bp | AACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTCTCTGCCCTCCTGGATaGTGCCACGCTTCCTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: NSQLLLQCSALLDAATLPLCPPG*CHASCY Trigger: ATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAG...AGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR CAA 90 bp | GTGTGTGTCGTGGTCAAACTAGATTCCCTGGAACCAGAGTTACAGTaGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGA | + |
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Preference number: 2 (lower is better) Translates to: VCVVVKLDSLEPELQ*CLPLDAGNQPRPSG Trigger: TCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCCAGGGAATCTAGTTTGACCACGACACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCGTCAGGCTGGGAAGATaGCTCAGTCACTATAGTACT | + |
|
Preference number: 2 (lower is better) Translates to: TVVPATGCWEPTQALRKSVRLGR*LSHYST Trigger: AGTACTATAGTGACTGAGCCATCTTCCCAGCCTGAC...GCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGGCTGGCCTTGCATTCATGGCAACCGTCACATCTCAGCTTCTCAAGTGCCAGCTACTTCTCCAGTaGTCTGCCCTCCTGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: SQAGLAFMATVTSQLLKCQLLLQ*SALLDA Trigger: AGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTG...GCACTTGAGAAGCTGAGATGTGACGGTTGCCATGAATGCAAGGCCAGCCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| 3UTR-3UTR TCA 90 bp | AGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAAAAAGTGAAGTATGACTaGAGAAGACGCCTGGCATCA | + |
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Preference number: 2 (lower is better) Translates to: SCACHWMLGTNPGPPEEQKVKYD*RRRLAS Trigger: TGATGCCAGGCGTCTTCTTCAGTCATACTTCACTTT...TTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGGCTGGCCTTGCATTCATGGCAACCGTCACATCTCAGCTTCTCAAGTGCATGTGGGTGGCAGTCTaGTACCCGCTTCCTTTGGAT | + |
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Preference number: 2 (lower is better) Translates to: SQAGLAFMATVTSQLLKCMWVAV*YPLPLD Trigger: ATCCAAAGGAAGCGGGTAGCAGACTGCCACCCACAT...GCACTTGAGAAGCTGAGATGTGACGGTTGCCATGAATGCAAGGCCAGCCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| 3UTR-3UTR GCA 90 bp | AGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAAACTGGACTATTTTTCTaGCTCCACTTCCATGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: SCACHWMLGTNPGPPEEQTGLFF*LHFHGG Trigger: ACCACCATGGAAGTGGAGGCAGAAAAATAGTCCAGT...TTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTGCTATATCCCTGCATTCCAATaGCAGAAGCAGGCAGATCTC | + |
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Preference number: 2 (lower is better) Translates to: SATSPVLCPPGCCHASCYIPAFQ*QKQADL Trigger: GAGATCTGCCTGCTTCTGCCATTGGAATGCAGGGAT...ATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCCAGGCTGGCCTTGCATTCATGGCAACCGTCACATCTCAGCTTCTCAAGTGAGTTGTGCCTGCCACTaGATGCTGGGAACCAACCCA | + |
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Preference number: 2 (lower is better) Translates to: IPGWPCIHGNRHISASQVSCACH*MLGTNP Trigger: TGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACT...CACTTGAGAAGCTGAGATGTGACGGTTGCCATGAATGCAAGGCCAGCCTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| 3UTR-3UTR CCA 90 bp | GGAACCAGAGTTACAGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCTACAGCAGGGCTTCCTaGTTTTTCCTTCTCCACACT | + |
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Preference number: 2 (lower is better) Translates to: GTRVTVVPATGCWEPTQAYSRAS*FFLLHT Trigger: AGTGTGGAGAAGGAAAAACCAGGAAGCCCTGCTGTA...GGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
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| 3UTR-3UTR TCA 90 bp | GTGATGTCCATCTGTCATCCCAGAGTTGGGGCAGCAGAGGCAGCTGAATCCCAGCACCACCCCCAAAAGTaGAGTATGACTGAAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: VMSICHPRVGAAEAAESQHHPQK*SMTEED Trigger: GTCTTCTTCAGTCATACTTCACTTTTGGGGGTGGTG...CTGGGATTCAGCTGCCTCTGCTGCCCCAACTCTGGGATGACAGATGGACATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTGGAACCAGAGTTACAGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCCACCACCCCCAAAAGTaGAGTATGACTGAAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: SLEPELQLCLPLDAGNQPHHPQK*SMTEED Trigger: GTCTTCTTCAGTCATACTTCACTTTTGGGGGTGGTG...GGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCCAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTGCTATAGGCCAGCTGCCTTTTaGCTCCAAAGCCAGAATTAT | + |
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Preference number: 2 (lower is better) Translates to: SATSPVLCPPGCCHASCYRPAAF*LQSQNY Trigger: ATAATTCTGGCTTTGGAGTCAAAAGGCAGCTGGCCT...ATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
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| 3UTR-3UTR CCA 90 bp | GCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTGCTATGATTGTTCAAGACCAGCCTaGTCTACAGAGGGAGTTACA | + |
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Preference number: 2 (lower is better) Translates to: ATSPVLCPPGCCHASCYDCSRPA*STEGVT Trigger: TGTAACTCCCTCTGTAGACCAGGCTGGTCTTGAACA...ATCATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTGCTATGTCAGGCTGGGAAGATaGCTCAGTCACTATAGTACT | + |
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Preference number: 2 (lower is better) Translates to: SATSPVLCPPGCCHASCYVRLGR*LSHYST Trigger: AGTACTATAGTGACTGAGCCATCTTCCCAGCCTGAC...ATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCATTTAATAGACACACTAGCCATATGGGGTGTGTGTCAAGGAGTTGGGGAGACTTCTCCAGTGCTCTaGCCTCCTGGATGCTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: SHLIDTLAIWGVCQGVGETSPVL*PPGCCH Trigger: GTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGT...CTCCCCAACTCCTTGACACACACCCCATATGGCTAGTGTGTCTATTAAATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| 3UTR-3UTR GCA 90 bp | AACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTACTGGACTATTTTTCTaGCTCCACTTCCATGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: NSQLLLQCSALLDAATLPTGLFF*LHFHGG Trigger: ACCACCATGGAAGTGGAGGCAGAAAAATAGTCCAGT...AGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCAACCGTCACATCTCAGCTTCTCAAGTGCCAGGATTATAATGAAGTGCTACCTGCCACTGGATGCTaGGAACCAACCCAGGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: MATVTSQLLKCQDYNEVLPATGC*EPTQAL Trigger: GAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGG...TAGCACTTCATTATAATCCTGGCACTTGAGAAGCTGAGATGTGACGGTTGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| 3UTR-3UTR TCA 90 bp | ATGGCAACCGTCACATCTCAGCTTCTCAAGTGCCAGGATTATAATGAAGTGCTAGGCAGCAGAGGCAGCTaGATCCCAGGAGTTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: MATVTSQLLKCQDYNEVLGSRGS*IPGVHW Trigger: CCAGTGAACTCCTGGGATTCAGCTGCCTCTGCTGCC...TAGCACTTCATTATAATCCTGGCACTTGAGAAGCTGAGATGTGACGGTTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| 3UTR-3UTR GCA 90 bp | GTGATGTCCATCTGTCATCCCAGAGTTGGGGCAGCAGAGGCAGCTGAATCCCAGATGGTAGGAACAGAATaGATCCAGCTCTTGAAACTC | + |
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Preference number: 2 (lower is better) Translates to: VMSICHPRVGAAEAAESQMVGTE*IQLLKL Trigger: GAGTTTCAAGAGCTGGATGCATTCTGTTCCTACCAT...CTGGGATTCAGCTGCCTCTGCTGCCCCAACTCTGGGATGACAGATGGACATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCATTCCAATGGCAGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCTGGTAAGGCAATGTCAGGCTaGGAAGATGGCTCAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: PAFQWQKQADLFVQDQPGKAMSG*EDGSVT Trigger: AGTGACTGAGCCATCTTCCCAGCCTGACATTGCCTT...ACCAGGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCTGCCATTGGAATGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR CCA 90 bp | GCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTGCTATGATCATCCTTTGCATTCTTaGGTACGAGATAAAACGGCT | + |
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Preference number: 2 (lower is better) Translates to: ATSPVLCPPGCCHASCYDHPLHS*VRDKTA Trigger: AGCCGTTTTATCTCGTACCCAAGAATGCAAAGGATG...ATCATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTTTGGATGAAGATGTAGAACTCTCAGCTACTTCTCCAGTGCTCTGCCCTGTGCCCAGCCAGCCTTaGATAGGTAGTCCTTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LPLDEDVELSATSPVLCPVPSQP*IGSPSL Trigger: CAAAGAAGGACTACCTATTCAAGGCTGGCTGGGCAC...AGGGCAGAGCACTGGAGAAGTAGCTGAGAGTTCTACATCTTCATCCAAAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTGGAACCAGAGTTACAGTTGTGCCTGCCACTGGATGCTGGGAACCAACCTCCACATGTGAAAGATaGCAGTTTTCACATGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: FPGTRVTVVPATGCWEPTSTCER*QFSHGR Trigger: CCTACCATGTGAAAACTGCCATCTTTCACATGTGGA...GGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCCAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR CCA 90 bp | GTACTCAAAGAGAACATCAGCCATTTAATAGACACACTAGCCATATGGGGTGTGAGTGCTCTGCCCTCCTaGATGCTGCCACGCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: VLKENISHLIDTLAIWGVSALPS*MLPRFL Trigger: CAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACT...CACACCCCATATGGCTAGTGTGTCTATTAAATGGCTGATGTTCTCTTTGAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| 3UTR-3UTR TCA 90 bp | CAGATCTCTTTGTTCAAGACCAGCCTGGTCTACAGAGGGAGTTACAAGACAGCCTCCTGGGTCCACATGTaGAAGATGGCAGTTTTCACA | + |
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Preference number: 2 (lower is better) Translates to: QISLFKTSLVYRGSYKTASWVHM*KMAVFT Trigger: TGTGAAAACTGCCATCTTTCACATGTGGACCCAGGA...GGCTGTCTTGTAACTCCCTCTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000127190.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCAATGGCAGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCTGGTCTACAGCACCACCCCCAAAAGTaGAGTATGACTGAAGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: FQWQKQADLFVQDQPGLQHHPQK*SMTEED Trigger: GTCTTCTTCAGTCATACTTCACTTTTGGGGGTGGTG...CTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCTGCCATTGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGTTACACAGGGAACAGCTACAGACCACTGGAAAAGGCTCCTGCAACAACCCTGTTCAAGACCAGCCTaGTCTACAGAGGGAGTTACA | + |
|
Preference number: 2 (lower is better) Translates to: FVTQGTATDHWKRLLQQPCSRPA*STEGVT Trigger: TGTAACTCCCTCTGTAGACCAGGCTGGTCTTGAACA...GGGTTGTTGCAGGAGCCTTTTCCAGTGGTCTGTAGCTGTTCCCTGTGTAACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| 3UTR-3UTR CCA 90 bp | GGACTACACAGAAACCATGTCTTGAAATCACCACTCTTCCCACCACCCCCAAAAAAGGCAATGTCAGGCTaGGAAGATGGCTCAGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: GLHRNHVLKSPLFPPPPKKAMSG*EDGSVT Trigger: AGTGACTGAGCCATCTTCCCAGCCTGACATTGCCTT...TTTTGGGGGTGGTGGGAAGAGTGGTGATTTCAAGACATGGTTTCTGTGTAGTCC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGAGAACATCAGCCATTTAATAGACACACTAGCCATATGGGGTGTGTGTCATCTTGGCCATGTGGGTaGCAGTCTGCTACCCGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: QREHQPFNRHTSHMGCVSSWPCG*QSATRF Trigger: GAAGCGGGTAGCAGACTGCCACCCACATGGCCAAGA...TGACACACACCCCATATGGCTAGTGTGTCTATTAAATGGCTGATGTTCTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR CAA 90 bp | ACAGAGGGAGTTACAAGACAGCCAGGACTACACAGAAACCATGTCTaGAAATCACCACTCTTCCCACCACCCCCAAAAGTGAAGTATGAC | + |
|
Preference number: 2 (lower is better) Translates to: TEGVTRQPGLHRNHV*KSPLFPPPPKVKYD Trigger: GTCATACTTCACTTTTGGGGGTGGTGGGAAGAGTGGTGATTTCAAGACATGGTTTCTGTGTAGTCCTGGCTGTCTTGTAACTCCCTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCTTTGGATGAAGATGTAGAACTCTCAGCTACTTCTCCAGTGCTCTGCCCTTCCTGGGTCCACATGTaGAAGATGGCAGTTTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: LPLDEDVELSATSPVLCPSWVHM*KMAVFT Trigger: TGTGAAAACTGCCATCTTTCACATGTGGACCCAGGA...AGGGCAGAGCACTGGAGAAGTAGCTGAGAGTTCTACATCTTCATCCAAAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAATGGCAGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCTGGTCTACAGCGCCAGGTCTCTCCTTaGAAACTATTTCCATCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FQWQKQADLFVQDQPGLQRQVSP*KLFPSF Trigger: AAAGGATGGAAATAGTTTTCAAGGAGAGACCTGGCG...CTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCTGCCATTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGCATTCCAATGGCAGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCTGGTATGGTAGGAACAGAATaGATCCAGCTCTTGAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: PAFQWQKQADLFVQDQPGMVGTE*IQLLKL Trigger: GAGTTTCAAGAGCTGGATGCATTCTGTTCCTACCAT...ACCAGGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCTGCCATTGGAATGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGAGAACATCAGCCATTTAATAGACACACTAGCCATATGGGGTGTGTGTCAAGTTGTGCCTGCCACTaGATGCTGGGAACCAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: QREHQPFNRHTSHMGCVSSCACH*MLGTNP Trigger: TGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACT...TGACACACACCCCATATGGCTAGTGTGTCTATTAAATGGCTGATGTTCTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR-3UTR TCA 90 bp | AGCCATTTAATAGACACACTAGCCATATGGGGTGTGTGTCAAGGAGTTGGGGAGAAAGTGAAGTATGACTaGAGAAGACGCCTGGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: SHLIDTLAIWGVCQGVGEKVKYD*RRRLAS Trigger: TGATGCCAGGCGTCTTCTTCAGTCATACTTCACTTT...CTCCCCAACTCCTTGACACACACCCCATATGGCTAGTGTGTCTATTAAATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR-3UTR TCA 90 bp | CAGATCTCTTTGTTCAAGACCAGCCTGGTCTACAGAGGGAGTTACAAGACAGCCCAACAATGTAAAAGCTaGATAGGTGATGTCCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: QISLFKTSLVYRGSYKTAQQCKS*IGDVHL Trigger: CAGATGGACATCACCTATTCAGCTTTTACATTGTTG...GGCTGTCTTGTAACTCCCTCTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGGGTTCTTATTTTGTACTCAAAGAGAACATCAGCCATTTAATAGACACACTAACTTCTCCAGTGCTCTaGCCTCCTGGATGCTGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: GGSYFVLKENISHLIDTLTSPVL*PPGCCH Trigger: GTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGT...TAGTGTGTCTATTAAATGGCTGATGTTCTCTTTGAGTACAAAATAAGAACCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR-3UTR CCA 90 bp | GGACTACACAGAAACCATGTCTTGAAATCACCACTCTTCCCACCACCCCCAAAATCCACATGTGAAAGATaGCAGTTTTCACATGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLHRNHVLKSPLFPPPPKSTCER*QFSHGR Trigger: CCTACCATGTGAAAACTGCCATCTTTCACATGTGGA...TTTTGGGGGTGGTGGGAAGAGTGGTGATTTCAAGACATGGTTTCTGTGTAGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR CCA 90 bp | GTACTCAAAGAGAACATCAGCCATTTAATAGACACACTAGCCATATGGGGTGTGCTGCCTCCACTTCCATaGTGGTTTGAATATGCTCCG | + |
|
Preference number: 2 (lower is better) Translates to: VLKENISHLIDTLAIWGVLPPLP*WFEYAP Trigger: CGGAGCATATTCAAACCACCATGGAAGTGGAGGCAG...CACACCCCATATGGCTAGTGTGTCTATTAAATGGCTGATGTTCTCTTTGAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGAGAACATCAGCCATTTAATAGACACACTAGCCATATGGGGTGTGTGTCACCAGTTTCTCTGTCCTaGGGCACTCAAGAAAGAATG | + |
|
Preference number: 2 (lower is better) Translates to: QREHQPFNRHTSHMGCVSPVSLS*GTQERM Trigger: CATTCTTTCTTGAGTGCCTCAGGACAGAGAAACTGG...TGACACACACCCCATATGGCTAGTGTGTCTATTAAATGGCTGATGTTCTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034898.14 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCTTTGGATGAAGATGTAGAACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCAACAATGTAAAAGCTaGATAGGTGATGTCCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: LPLDEDVELSATSPVLCPQQCKS*IGDVHL Trigger: CAGATGGACATCACCTATTCAGCTTTTACATTGTTG...AGGGCAGAGCACTGGAGAAGTAGCTGAGAGTTCTACATCTTCATCCAAAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGAGAACATCAGCCATTTAATAGACACACTAGCCATATGGGGTGTGTGTCATGTTCAAGACCAGCCTaGTCTACAGAGGGAGTTACA | + |
|
Preference number: 2 (lower is better) Translates to: QREHQPFNRHTSHMGCVSCSRPA*STEGVT Trigger: TGTAACTCCCTCTGTAGACCAGGCTGGTCTTGAACA...TGACACACACCCCATATGGCTAGTGTGTCTATTAAATGGCTGATGTTCTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR-3UTR GCA 90 bp | GGGGGTTCTTATTTTGTACTCAAAGAGAACATCAGCCATTTAATAGACACACTAATGTGGGTGGCAGTCTaGTACCCGCTTCCTTTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: GGSYFVLKENISHLIDTLMWVAV*YPLPLD Trigger: ATCCAAAGGAAGCGGGTAGCAGACTGCCACCCACAT...TAGTGTGTCTATTAAATGGCTGATGTTCTCTTTGAGTACAAAATAAGAACCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR-3UTR CCA 90 bp | GGGGGTTCTTATTTTGTACTCAAAGAGAACATCAGCCATTTAATAGACACACTACCTCCACTTCCATGGTaGTTTGAATATGCTCCGCGC | + |
|
Preference number: 2 (lower is better) Translates to: GGSYFVLKENISHLIDTLPPLPW*FEYAPR Trigger: GCGCGGAGCATATTCAAACCACCATGGAAGTGGAGG...TAGTGTGTCTATTAAATGGCTGATGTTCTCTTTGAGTACAAAATAAGAACCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR-3UTR CCA 90 bp | AAGTGCCAGGATTATAATGAAGTGCTAGCACACTTATCATATTATGGGGTCAGACTGCCTCCACTTCCATaGTGGTTTGAATATGCTCCG | + |
|
Preference number: 2 (lower is better) Translates to: KCQDYNEVLAHLSYYGVRLPPLP*WFEYAP Trigger: CGGAGCATATTCAAACCACCATGGAAGTGGAGGCAG...TCTGACCCCATAATATGATAAGTGTGCTAGCACTTCATTATAATCCTGGCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR-3UTR GCA 90 bp | GGTCCACATGTGAAAGATGGCAGTTTTCACATGGTAGGAACAGAATGCATCCAGACTATTTCCATCCTTTaGATTCTTGGGTACGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: GPHVKDGSFHMVGTECIQTISIL*ILGYEI Trigger: TATCTCGTACCCAAGAATGCAAAGGATGGAAATAGT...CTGGATGCATTCTGTTCCTACCATGTGAAAACTGCCATCTTTCACATGTGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAACATACATGGCAGACATTATTTGTTACACAGGGAACAGCTACAGACCACTGCAACAATGTAAAAGCTaGATAGGTGATGTCCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: TTYMADIICYTGNSYRPLQQCKS*IGDVHL Trigger: CAGATGGACATCACCTATTCAGCTTTTACATTGTTG...CAGTGGTCTGTAGCTGTTCCCTGTGTAACAAATAATGTCTGCCATGTATGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAAGAACCAGAGTTACAGTaGTGCCTGCCACTGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: SCACHWMLGTNPGPPEEQEPELQ*CLPLDA Trigger: AGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTC...TTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAATAAGTGCGGCTCTCGTCTTAGATaGGTCCTCACTTTTGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PATGCWEPTQALRKSNKCGSRLR*VLTFVP Trigger: GGGCACAAAAGTGAGGACCAATCTAAGACGAGAGCC...GCACTTATTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
||
| 3UTR GCA 72 bp | CCTGGAACCAGAGTTACAGTTGTGCCTGCCACTGGATaGTGGGAACCAACCCAGGCCCTCCGGAAGAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PGTRVTVVPATG*WEPTQALRKSN Trigger: ATTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR CCA 72 bp | ATTCCCTGGAACCAGAGTTACAGTTGTGCCTGCCACTaGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IPWNQSYSCACH*MLGTNPGPPEE Trigger: CTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCCAGGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR CCA 72 bp | GGAAATGAGCATCAGCTGCCCCTGGGGAACGCTGCTTaGATGCAGACGAGAGTATCCTCTGTCCCACACCCA | + |
|
Preference number: 3 (lower is better) Translates to: GNEHQLPLGNAA*MQTRVSSVPHP Trigger: TGGGTGTGGGACAGAGGATACTCTCGTCTGCATCCAAGCAGCGTTCCCCAGGGGCAGCTGATGCTCATTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| 3UTR CCA 72 bp | GGAACCAGAGTTACAGTTGTGCCTGCCACTGGATGCTaGGAACCAACCCAGGCCCTCCGGAAGAGCAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: GTRVTVVPATGC*EPTQALRKSNK Trigger: CTTATTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAGGCTGGCCTTGCATTCATGGCAACCGTCACATCTCAGCTTCTCAAGTGCTTTAAGACTCTCCTCTaGGCCATGTGGGTGGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SQAGLAFMATVTSQLLKCFKTLL*AMWVAV Trigger: GACTGCCACCCACATGGCCAAGAGGAGAGTCTTAAA...GCACTTGAGAAGCTGAGATGTGACGGTTGCCATGAATGCAAGGCCAGCCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR GCA 72 bp | CTCTCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATaGTGCCACGCTTCCTGCTATGATGACAACAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: LSATSPVLCPPG*CHASCYDDNRL Trigger: TAGTCTGTTGTCATCATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR CCA 72 bp | GGTGGGCTTTTAAGACTCTCCTCTTGGCCATGTGGGTaGCAGTCTGCTACCCGCTTCCTTTGGATGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: GGLLRLSSWPCG*QSATRFLWMKM Trigger: CATCTTCATCCAAAGGAAGCGGGTAGCAGACTGCCACCCACATGGCCAAGAGGAGAGTCTTAAAAGCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTTGCTACCCGCTTCCTTaGGATGAAGATGTAGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: NSQLLLQCSALLDAATLPCYPLP*DEDVEL Trigger: GAGTTCTACATCTTCATCCAAAGGAAGCGGGTAGCA...AGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR TCA 72 bp | CTGGACTATTTTTCTGCCTCCACTTCCATGGTGGTTTaGATATGCTCCGCGCAGGGTGTGGCACTACGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LDYFSASTSMVV*ICSAQGVALRG Trigger: TCCTCGTAGTGCCACACCCTGCGCGGAGCATATTCAAACCACCATGGAAGTGGAGGCAGAAAAATAGTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTGGATGCAGACGAGAGTATCCTCTGTCCCACACCCATCTCGCTGCGCTGTCACAGAAACCATGTCTaGAAATCACCACTCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CLDADESILCPTPISLRCHRNHV*KSPLFP Trigger: TGGGAAGAGTGGTGATTTCAAGACATGGTTTCTGTG...ACAGCGCAGCGAGATGGGTGTGGGACAGAGGATACTCTCGTCTGCATCCAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTGGAACCAGAGTTACAGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCCACAGAAACCATGTCTaGAAATCACCACTCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLEPELQLCLPLDAGNQPHRNHV*KSPLFP Trigger: TGGGAAGAGTGGTGATTTCAAGACATGGTTTCTGTG...GGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAACTTATAAAAGTTGCCTaGGTCATGGTGTCTGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SCACHWMLGTNPGPPEEQLIKVA*VMVSVH Trigger: ATGAACAGACACCATGACCAAGGCAACTTTTATAAG...TTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAAAACTATTTCCATCCTTaGCATTCTTGGGTACGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SCACHWMLGTNPGPPEEQNYFHP*HSWVRD Trigger: ATCTCGTACCCAAGAATGCAAAGGATGGAAATAGTT...TTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
||
| 3UTR GCA 72 bp | TCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTaGCACGCTTCCTGCTATGATGACAACAGACTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SATSPVLCPPGC*HASCYDDNRLN Trigger: ATTTAGTCTGTTGTCATCATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR GCA 72 bp | CAACAAAGTACTCAAAAAGAGGAAATGAGCATCAGCTaGCCCTGGGGAACGCTGCTTGGATGCAGACGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QQSTQKEEMSIS*PWGTLLGCRRE Trigger: CTCTCGTCTGCATCCAAGCAGCGTTCCCCAGGGGCAGCTGATGCTCATTTCCTCTTTTTGAGTACTTTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| 3UTR CCA 72 bp | AGTACTCAAAAAGAGGAAATGAGCATCAGCTGCCCCTaGGGAACGCTGCTTGGATGCAGACGAGAGTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: STQKEEMSISCP*GTLLGCRREYP Trigger: AGGATACTCTCGTCTGCATCCAAGCAGCGTTCCCCAGGGGCAGCTGATGCTCATTTCCTCTTTTTGAGTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| 3UTR-3UTR CAA 90 bp | GTAGAACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTCTTATAAAAGTTGCCTaGGTCATGGTGTCTGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VELSATSPVLCPPGCCHALIKVA*VMVSVH Trigger: ATGAACAGACACCATGACCAAGGCAACTTTTATAAG...AGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAGTTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR TCA 72 bp | ATCACCACTCTTCCCACCACCCCCAAAAGTGAAGTATaGCTGAAGAAGACGCCTGGCATCAATCGACATCTG | + |
|
Preference number: 3 (lower is better) Translates to: ITTLPTTPKSEV*LKKTPGINRHL Trigger: CAGATGTCGATTGATGCCAGGCGTCTTCTTCAGTCATACTTCACTTTTGGGGGTGGTGGGAAGAGTGGTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCCCTGCATTCCAATGGCAGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCCTTTTCTGCAGCATTTaGCTCCGGAAGATTCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: NPCIPMAEAGRSLCSRPALFCSI*LRKIHS Trigger: GCTGTGAATCTTCCGGAGCAAAATGCTGCAGAAAAG...GGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCTGCCATTGGAATGCAGGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
||
| 3UTR CCA 72 bp | GATTGTATTTTATATCCCAGGCTGGCCTTGCATTCATaGCAACCGTCACATCTCAGCTTCTCAAGTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DCILYPRLALHS*QPSHLSFSSAR Trigger: CCTGGCACTTGAGAAGCTGAGATGTGACGGTTGCCATGAATGCAAGGCCAGCCTGGGATATAAAATACAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR-3UTR CAA 90 bp | AGACAGCCAGGACTACACAGAAACCATGTCTTGAAATCACCACTCTTCCCACCAGCGCCAGGTCTCTCCTaGAAAACTATTTCCATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RQPGLHRNHVLKSPLFPPAPGLS*KTISIL Trigger: AAGGATGGAAATAGTTTTCAAGGAGAGACCTGGCGC...TGGTGGGAAGAGTGGTGATTTCAAGACATGGTTTCTGTGTAGTCCTGGCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACTACACAGAAACCATGTCTTGAAATCACCACTCTTCCCACCACCCCCAAAACACAGAAACCATGTCTaGAAATCACCACTCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GLHRNHVLKSPLFPPPPKHRNHV*KSPLFP Trigger: TGGGAAGAGTGGTGATTTCAAGACATGGTTTCTGTG...TTTTGGGGGTGGTGGGAAGAGTGGTGATTTCAAGACATGGTTTCTGTGTAGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR TCA 72 bp | CTACAGGCAAGTGACTTACATCACTTTAACCCAATTTaGTTTCAGAAGGCAATGTCAGGCTGGGAAGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: LQASDLHHFNPI*FQKAMSGWEDG Trigger: GCCATCTTCCCAGCCTGACATTGCCTTCTGAAATCAAATTGGGTTAAAGTGATGTAAGTCACTTGCCTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR CCA 72 bp | AATTTGATTTCAGAAGGCAATGTCAGGCTGGGAAGATaGCTCAGTCACTATAGTACTTGCTTTGCAAGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: NLISEGNVRLGR*LSHYSTCFASV Trigger: CACGCTTGCAAAGCAAGTACTATAGTGACTGAGCCATCTTCCCAGCCTGACATTGCCTTCTGAAATCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR CCA 72 bp | ACATTATTTGTTACACAGGGAACAGCTACAGACCACTaGAAAAGGCTCCTGCAACAACCCATGCAACAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TLFVTQGTATDH*KRLLQQPMQQS Trigger: ACTTTGTTGCATGGGTTGTTGCAGGAGCCTTTTCCAGTGGTCTGTAGCTGTTCCCTGTGTAACAAATAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| 3UTR TCA 72 bp | AGTCACTATAGTACTTGCTTTGCAAGCGTGAGGACTTaGGTTGAGACCGCTAGCAACAATGTAAAAGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SHYSTCFASVRT*VETASNNVKAE Trigger: TTCAGCTTTTACATTGTTGCTAGCGGTCTCAACTCAAGTCCTCACGCTTGCAAAGCAAGTACTATAGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR GCA 72 bp | AAAAATATAGCTAAGAACCACACTGGACTATTTTTCTaGCTCCACTTCCATGGTGGTTTGAATATGCTCCGC | + |
|
Preference number: 3 (lower is better) Translates to: KNIAKNHTGLFF*LHFHGGLNMLR Trigger: GCGGAGCATATTCAAACCACCATGGAAGTGGAGGCAGAAAAATAGTCCAGTGTGGTTCTTAGCTATATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR GCA 72 bp | TTAAACAAGATTGTATTTTATATCCCAGGCTGGCCTTaGATTCATGGCAACCGTCACATCTCAGCTTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LNKIVFYIPGWP*IHGNRHISASQ Trigger: TTGAGAAGCTGAGATGTGACGGTTGCCATGAATGCAAGGCCAGCCTGGGATATAAAATACAATCTTGTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR GCA 90 bp | CCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAATAAGTGCCTGGTCCTGCTGGGCTaGGTCGGGGCGCGCTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PATGCWEPTQALRKSNKCLVLLG*VGARFA Trigger: CGCGAAGCGCGCCCCGACGCAGCCCAGCAGGACCAG...GCACTTATTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR CCA 90 bp | GTAGAACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTGCTCCGGATCCAGGATaGCCTGCTGCTGGGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: VELSATSPVLCPPGCCHAAPDPG*PAAGAP Trigger: GGGTGCCCCAGCAGCAGGCCATCCTGGATCCGGAGC...AGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAGTTCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGGCTGGCCTTGCATTCATGGCAACCGTCACATCTCAGCTTCTCAAGTGCCGCAGCTTTCCGCGTaGGCCCTGGTCCTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IPGWPCIHGNRHISASQVPQLSA*ALVLLG Trigger: GCCCAGCAGGACCAGGGCCCACGCGGAAAGCTGCGG...CACTTGAGAAGCTGAGATGTGACGGTTGCCATGAATGCAAGGCCAGCCTGGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR GCA 90 bp | TTTGTTACACAGGGAACAGCTACAGACCACTGGAAAAGGCTCCTGCAACAACCCCTGGTCCTGCTGGGCTaGGTCGGGGCGCGCTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FVTQGTATDHWKRLLQQPLVLLG*VGARFA Trigger: CGCGAAGCGCGCCCCGACGCAGCCCAGCAGGACCAG...GGGTTGTTGCAGGAGCCTTTTCCAGTGGTCTGTAGCTGTTCCCTGTGTAACAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| CDS-3UTR CCA 90 bp | GGCAGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCTGGTCTACAGAGGGAGTGCTCCGGATCCAGGATaGCCTGCTGCTGGGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GRSRQISLFKTSLVYRGSAPDPG*PAAGAP Trigger: GGGTGCCCCAGCAGCAGGCCATCCTGGATCCGGAGC...ACTCCCTCTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| CDS-3UTR GCA 90 bp | CAGATCTCTTTGTTCAAGACCAGCCTGGTCTACAGAGGGAGTTACAAGACAGCCGTGGCCCTTGCTGGATaGACTCGGGGCCCTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QISLFKTSLVYRGSYKTAVALAG*TRGPGA Trigger: TGCCCCAGGGCCCCGAGTGCATCCAGCAAGGGCCAC...GGCTGTCTTGTAACTCCCTCTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR CCA 90 bp | CTATTTTTCTGCCTCCACTTCCATGGTGGTTTGAATATGCTCCGCGCAGGGTGTTTTCCGCGTGGGCCCTaGTCCTGCTGGGCTGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LFFCLHFHGGLNMLRAGCFPRGP*SCWAAS Trigger: CGACGCAGCCCAGCAGGACCAGGGCCCACGCGGAAA...ACACCCTGCGCGGAGCATATTCAAACCACCATGGAAGTGGAGGCAGAAAAATAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR TCA 90 bp | ACAGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCTCCTGGGTCCACATGTaGAAGATGGCAGTTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TVVPATGCWEPTQALRKSSWVHM*KMAVFT Trigger: TGTGAAAACTGCCATCTTTCACATGTGGACCCAGGA...GCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| CDS-3UTR GCA 90 bp | AGACAGCCAGGACTACACAGAAACCATGTCTTGAAATCACCACTCTTCCCACCAGTGGCCCTTGCTGGATaGACTCGGGGCCCTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQPGLHRNHVLKSPLFPPVALAG*TRGPGA Trigger: TGCCCCAGGGCCCCGAGTGCATCCAGCAAGGGCCAC...TGGTGGGAAGAGTGGTGATTTCAAGACATGGTTTCTGTGTAGTCCTGGCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR CCA 90 bp | GGACTACACAGAAACCATGTCTTGAAATCACCACTCTTCCCACCACCCCCAAAAGCTCCGGATCCAGGATaGCCTGCTGCTGGGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GLHRNHVLKSPLFPPPPKAPDPG*PAAGAP Trigger: GGGTGCCCCAGCAGCAGGCCATCCTGGATCCGGAGC...TTTTGGGGGTGGTGGGAAGAGTGGTGATTTCAAGACATGGTTTCTGTGTAGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| CDS-3UTR TCA 90 bp | AGAACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCGTGCCCAGCCAGCCTTaGATAGGTAGTCCTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLSYFSSALPSWMLPRFVPSQP*IGSPSL Trigger: CAAAGAAGGACTACCTATTCAAGGCTGGCTGGGCAC...GAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR GCA 90 bp | CCTGGGTCCACATGTGAAAGATGGCAGTTTTCACATGGTAGGAACAGAATGCATGGATCCAGGATGGCCTaGTGCTGGGGCACCCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: PGSTCERWQFSHGRNRMHGSRMA*CWGTRT Trigger: CGTCCGGGTGCCCCAGCAGCAGGCCATCCTGGATCC...ATGCATTCTGTTCCTACCATGTGAAAACTGCCATCTTTCACATGTGGACCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000127190.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCTTTGGATGAAGATGTAGAACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCTCAGTGGCCCTTGCTaGATGCACTCGGGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLDEDVELSATSPVLCPLSGPC*MHSGPW Trigger: CCAGGGCCCCGAGTGCATCCAGCAAGGGCCACTGAG...AGGGCAGAGCACTGGAGAAGTAGCTGAGAGTTCTACATCTTCATCCAAAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR CAA 72 bp | GTGGTCAAACTAGATTCCCTGGAACCAGAGTTACAGTaGTGCCTGCCACTGGATGCTGGGAACCAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVKLDSLEPELQ*CLPLDAGNQPR Trigger: CCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCCAGGGAATCTAGTTTGACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| CDS-3UTR TCA 90 bp | TGGCAGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCTGGTCTACAGAGGGAGGTGCCCAGCCAGCCTTaGATAGGTAGTCCTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WQKQADLFVQDQPGLQREVPSQP*IGSPSL Trigger: CAAAGAAGGACTACCTATTCAAGGCTGGCTGGGCAC...CTCCCTCTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR TCA 90 bp | GTAGAACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTATGTACTTTTCAGTGTaGGAGAAAGAGAGGCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VELSATSPVLCPPGCCHAMYFSV*EKERRQ Trigger: CTGGCGCCTCTCTTTCTCTCACACTGAAAAGTACAT...AGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAGTTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR GCA 90 bp | CCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAATAAGTGCATGGTAGGAACAGAATaGATCCAGCTCTTGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PATGCWEPTQALRKSNKCMVGTE*IQLLKL Trigger: GAGTTTCAAGAGCTGGATGCATTCTGTTCCTACCAT...GCACTTATTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| CDS-3UTR CCA 90 bp | ACTTACATCACTTTAACCCAATTTGATTTCAGAAGGCAATGTCAGGCTGGGAAGCCGCAGCTTTCCGCGTaGGCCCTGGTCCTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TYITLTQFDFRRQCQAGKPQLSA*ALVLLG Trigger: GCCCAGCAGGACCAGGGCCCACGCGGAAAGCTGCGG...CTTCCCAGCCTGACATTGCCTTCTGAAATCAAATTGGGTTAAAGTGATGTAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR GCA 90 bp | AGCCATTTAATAGACACACTAGCCATATGGGGTGTGTGTCAAGGAGTTGGGGAGTCCGACTCCCGTTTCTaGATTCTGCGCAGCAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SHLIDTLAIWGVCQGVGESDSRF*ILRSRR Trigger: ACGCCTGCTGCGCAGAATGCAGAAACGGGAGTCGGA...CTCCCCAACTCCTTGACACACACCCCATATGGCTAGTGTGTCTATTAAATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR GCA 90 bp | ACAGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCACTATTTCCATCCTTTaGATTCTTGGGTACGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: TVVPATGCWEPTQALRKSTISIL*ILGYEI Trigger: TATCTCGTACCCAAGAATGCAAAGGATGGAAATAGT...GCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR GCA 90 bp | CTGGGTCCACATGTGAAAGATGGCAGTTTTCACATGGTAGGAACAGAATGCATCTCCGACTCCCGTTTCTaGATTCTGCGCAGCAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGPHVKDGSFHMVGTECISDSRF*ILRSRR Trigger: ACGCCTGCTGCGCAGAATGCAGAAACGGGAGTCGGA...GATGCATTCTGTTCCTACCATGTGAAAACTGCCATCTTTCACATGTGGACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000127190.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTCCGGAAGAGCAATAAGTGCTTAAACATTCTTTTCTaGAGCATTTTGCTCCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PATGCWEPTQALRKSNKCLNILF*SILLRK Trigger: CTTCCGGAGCAAAATGCTGCAGAAAAGAATGTTTAA...GCACTTATTGCTCTTCCGGAGGGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| CDS-3UTR CCA 90 bp | AAGTGCCAGGATTATAATGAAGTGCTAGCACACTTATCATATTATGGGGTCAGATTTCCGCGTGGGCCCTaGTCCTGCTGGGCTGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KCQDYNEVLAHLSYYGVRFPRGP*SCWAAS Trigger: CGACGCAGCCCAGCAGGACCAGGGCCCACGCGGAAA...TCTGACCCCATAATATGATAAGTGTGCTAGCACTTCATTATAATCCTGGCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGGCTGGCCTTGCATTCATGGCAACCGTCACATCTCAGCTTCTCAAGTGTACAGCAGGGCTTCCTaGTTTTTCCTTCTCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: IPGWPCIHGNRHISASQVYSRAS*FFLLHT Trigger: AGTGTGGAGAAGGAAAAACCAGGAAGCCCTGCTGTA...CACTTGAGAAGCTGAGATGTGACGGTTGCCATGAATGCAAGGCCAGCCTGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGAACCAGAGTTACAGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCCATCCTTTGCATTCTTaGGTACGAGATAAAACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLEPELQLCLPLDAGNQPHPLHS*VRDKTA Trigger: AGCCGTTTTATCTCGTACCCAAGAATGCAAAGGATG...GGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCCAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR CCA 90 bp | GCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTGCTATGATTCCACATGTGAAAGATaGCAGTTTTCACATGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATSPVLCPPGCCHASCYDSTCER*QFSHGR Trigger: CCTACCATGTGAAAACTGCCATCTTTCACATGTGGA...ATCATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| 3UTR CAA 72 bp | TTGGCCATGTGGGTGGCAGTCTGCTACCCGCTTCCTTaGGATGAAGATGTAGAACTCTCAGCTACTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAMWVAVCYPLP*DEDVELSATSP Trigger: TGGAGAAGTAGCTGAGAGTTCTACATCTTCATCCAAAGGAAGCGGGTAGCAGACTGCCACCCACATGGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAATGGCAGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCTGGTCTACAGCCAGTTTCTCTGTCCTaGGGCACTCAAGAAAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: FQWQKQADLFVQDQPGLQPVSLS*GTQERM Trigger: CATTCTTTCTTGAGTGCCTCAGGACAGAGAAACTGG...CTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCTGCCATTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
||
| CDS-3UTR GCA 90 bp | AACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTCCTCCGAGATATCTTTaGGTTTCAATCTCAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSQLLLQCSALLDAATLPPPRYL*VSISIC Trigger: ACAAATTGAGATTGAAACGCAAAGATATCTCGGAGG...AGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGAACATCAGCCATTTAATAGACACACTAGCCATATGGGGTGTGTGTCATCCGACTCCCGTTTCTaGATTCTGCGCAGCAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QREHQPFNRHTSHMGCVSSDSRF*ILRSRR Trigger: ACGCCTGCTGCGCAGAATGCAGAAACGGGAGTCGGA...TGACACACACCCCATATGGCTAGTGTGTCTATTAAATGGCTGATGTTCTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| 3UTR CAA 72 bp | GTTACAAGACAGCCAGGACTACACAGAAACCATGTCTaGAAATCACCACTCTTCCCACCACCCCCAAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTRQPGLHRNHV*KSPLFPPPPKV Trigger: CACTTTTGGGGGTGGTGGGAAGAGTGGTGATTTCAAGACATGGTTTCTGTGTAGTCCTGGCTGTCTTGTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| 3UTR CAA 72 bp | GGCGCCAGGTCTCTCCTTGAAAACTATTTCCATCCTTaGCATTCTTGGGTACGAGATAAAACGGCTCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GARSLLENYFHP*HSWVRDKTALV Trigger: GACGAGAGCCGTTTTATCTCGTACCCAAGAATGCAAAGGATGGAAATAGTTTTCAAGGAGAGACCTGGCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAATGCTAACAACTTATCGAAGCAGGAGCTGAGGTTCCTGGGGTCCCACCGCCAGGTCTCTCCTTaGAAACTATTTCCATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKNANNLSKQELRFLGSHRQVSP*KLFPSF Trigger: AAAGGATGGAAATAGTTTTCAAGGAGAGACCTGGCG...GTGGGACCCCAGGAACCTCAGCTCCTGCTTCGATAAGTTGTTAGCATTCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034898.14 |
||
| CDS-3UTR TCA 90 bp | AGACAGCCAGGACTACACAGAAACCATGTCTTGAAATCACCACTCTTCCCACCAATGTACTTTTCAGTGTaGGAGAAAGAGAGGCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQPGLHRNHVLKSPLFPPMYFSV*EKERRQ Trigger: CTGGCGCCTCTCTTTCTCTCACACTGAAAAGTACAT...TGGTGGGAAGAGTGGTGATTTCAAGACATGGTTTCTGTGTAGTCCTGGCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR TCA 90 bp | CCTGGGTCCACATGTGAAAGATGGCAGTTTTCACATGGTAGGAACAGAATGCATAGGCCAGCTGCCTTTTaGCTCCAAAGCCAGAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: PGSTCERWQFSHGRNRMHRPAAF*LQSQNY Trigger: ATAATTCTGGCTTTGGAGTCAAAAGGCAGCTGGCCT...ATGCATTCTGTTCCTACCATGTGAAAACTGCCATCTTTCACATGTGGACCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034898.14 |
||
| 3UTR CAA 72 bp | TTCAGTGTGAGAGAAAGAGAGGCGCCAGGTCTCTCCTaGAAAACTATTTCCATCCTTTGCATTCTTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVREREAPGLS*KTISILCILGY Trigger: GTACCCAAGAATGCAAAGGATGGAAATAGTTTTCAAGGAGAGACCTGGCGCCTCTCTTTCTCTCACACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
||
| CDS-3UTR TCA 90 bp | GTACTCAAAGAGAACATCAGCCATTTAATAGACACACTAGCCATATGGGGTGTGAGGCCAGCTGCCTTTTaGCTCCAAAGCCAGAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: VLKENISHLIDTLAIWGVRPAAF*LQSQNY Trigger: ATAATTCTGGCTTTGGAGTCAAAAGGCAGCTGGCCT...CACACCCCATATGGCTAGTGTGTCTATTAAATGGCTGATGTTCTCTTTGAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS-3UTR GCA 90 bp | AGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCTGGTCTACAGAGGGAGTTACCCTCCGAGATATCTTTaGGTTTCAATCTCAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSRQISLFKTSLVYRGSYPPRYL*VSISIC Trigger: ACAAATTGAGATTGAAACGCAAAGATATCTCGGAGG...GTAACTCCCTCTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS-3UTR CCA 90 bp | ACTTACATCACTTTAACCCAATTTGATTTCAGAAGGCAATGTCAGGCTGGGAAGTACAGCAGGGCTTCCTaGTTTTTCCTTCTCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: TYITLTQFDFRRQCQAGKYSRAS*FFLLHT Trigger: AGTGTGGAGAAGGAAAAACCAGGAAGCCCTGCTGTA...CTTCCCAGCCTGACATTGCCTTCTGAAATCAAATTGGGTTAAAGTGATGTAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| 3UTR CAA 72 bp | TTTAAACAAGATTGTATTTTATATCCCAGGCTGGCCTaGCATTCATGGCAACCGTCACATCTCAGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FKQDCILYPRLA*HSWQPSHLSFS Trigger: TGAGAAGCTGAGATGTGACGGTTGCCATGAATGCAAGGCCAGCCTGGGATATAAAATACAATCTTGTTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| CDS-3UTR TCA 90 bp | ACTTACATCACTTTAACCCAATTTGATTTCAGAAGGCAATGTCAGGCTGGGAAGTCTGTTTACACACAGTaGAGCAAAGAAAGGGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TYITLTQFDFRRQCQAGKSVYTQ*SKERVD Trigger: ATCAACCCTTTCTTTGCTTCACTGTGTGTAAACAGA...CTTCCCAGCCTGACATTGCCTTCTGAAATCAAATTGGGTTAAAGTGATGTAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
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| CDS-3UTR GCA 90 bp | AAGTGCCAGGATTATAATGAAGTGCTAGCACACTTATCATATTATGGGGTCAGACCTCCGAGATATCTTTaGGTTTCAATCTCAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KCQDYNEVLAHLSYYGVRPPRYL*VSISIC Trigger: ACAAATTGAGATTGAAACGCAAAGATATCTCGGAGG...TCTGACCCCATAATATGATAAGTGTGCTAGCACTTCATTATAATCCTGGCACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| CDS-3UTR GCA 90 bp | AAGTGCCAGGATTATAATGAAGTGCTAGCACACTTATCATATTATGGGGTCAGAACTATTTCCATCCTTTaGATTCTTGGGTACGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: KCQDYNEVLAHLSYYGVRTISIL*ILGYEI Trigger: TATCTCGTACCCAAGAATGCAAAGGATGGAAATAGT...TCTGACCCCATAATATGATAAGTGTGCTAGCACTTCATTATAATCCTGGCACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| 3UTR CAA 72 bp | TTAAAAAGTGAAGACAACATACATGGCAGACATTATTaGTTACACAGGGAACAGCTACAGACCACTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKSEDNIHGRHY*LHREQLQTTGK Trigger: TTTTCCAGTGGTCTGTAGCTGTTCCCTGTGTAACAAATAATGTCTGCCATGTATGTTGTCTTCACTTTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
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| CDS GCA 90 bp | GGCTGGGGCTCCCGTACGGCGGGCAGCTCCGGATCCAGGATGGCCTaGTGCTGGGGCACCCGGACGGCAGGCCGCGCGGTGGCTCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GWGSRTAGSSGSRMA*CWGTRTAGRAVAPA Trigger: GGCAGGAGCCACCGCGCGGCCTGCCGTCCGGGTGCCCCAGCAGCAGGCCATCCTGGATCCGGAGCTGCCCGCCGTACGGGAGCCCCAGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS CCA 90 bp | CCTCGCGGCGCTCTGGGCTGCCCGGTGGAGCGCGCGCCCCTTCTGTaGCTAGGTCCCCTTACGACTTTCCGCGCCTCGGGATCCGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRGALGCPVERAPLL*LGPLTTFRASGSAG Trigger: GCCCGCGGATCCCGAGGCGCGGAAAGTCGTAAGGGGACCTAGCCACAGAAGGGGCGCGCGCTCCACCGGGCAGCCCAGAGCGCCGCGAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS GCA 90 bp | GGCCTGCTGCTGGGGCACCCGGACGGCAGGCCGCGCGGTGGCTCCTaGCGCGTCCATGGCCGAGGGCTGTGCATCTTTGGTGAGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLLLGHPDGRPRGGS*RVHGRGLCIFGELS Trigger: ACTGAGCTCACCAAAGATGCACAGCCCTCGGCCATGGACGCGGCAGGAGCCACCGCGCGGCCTGCCGTCCGGGTGCCCCAGCAGCAGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS GCA 90 bp | GTCCATGGCCGAGGGCTGTGCATCTTTGGTGAGCTCAGTGGCCCTTaGTGGATGCACTCGGGGCCCTGGGGCACGTGGCTTCTCCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VHGRGLCIFGELSGP*WMHSGPWGTWLLRG Trigger: ACCACGGAGAAGCCACGTGCCCCAGGGCCCCGAGTGCATCCAGCAAGGGCCACTGAGCTCACCAAAGATGCACAGCCCTCGGCCATGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS CCA 90 bp | CATGGCCGAGGGCTGTGCATCTTTGGTGAGCTCAGTGGCCCTTGCTaGATGCACTCGGGGCCCTGGGGCACGTGGCTTCTCCGTGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HGRGLCIFGELSGPC*MHSGPWGTWLLRGV Trigger: GACACCACGGAGAAGCCACGTGCCCCAGGGCCCCGAGTGCATCCAGCAAGGGCCACTGAGCTCACCAAAGATGCACAGCCCTCGGCCATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS CCA 90 bp | ATCTCAATTTGTCCAGCACCTTCTTTAGCTTGTCCGGTTCCTTCCTaGACCCTCGCGGCGCTCTGGGCTGCCCGGTGGAGCGCGCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISICPAPSLACPVPS*TLAALWAARWSARP Trigger: GGGGCGCGCGCTCCACCGGGCAGCCCAGAGCGCCGCGAGGGTCCAGGAAGGAACCGGACAAGCTAAAGAAGGTGCTGGACAAATTGAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS-3UTR CAA 90 bp | TCCCTGGAACCAGAGTTACAGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCGGCTCTCGTCTTAGATaGGTCCTCACTTTTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLEPELQLCLPLDAGNQPGSRLR*VLTFVP Trigger: GGGCACAAAAGTGAGGACCAATCTAAGACGAGAGCC...GGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| CDS-3UTR CAA 90 bp | GGAACCAGAGTTACAGTTGTGCCTGCCACTGGATGCTGGGAACCAACCCAGGCCCTTTTCTGCAGCATTTaGCTCCGGAAGATTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTRVTVVPATGCWEPTQALFCSI*LRKIHS Trigger: GCTGTGAATCTTCCGGAGCAAAATGCTGCAGAAAAG...GGCCTGGGTTGGTTCCCAGCATCCAGTGGCAGGCACAACTGTAACTCTGGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070742.14 |
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| CDS-3UTR CAA 90 bp | TCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTTCCTGCTATAACTTTGACAGCATCTaGGTAGCTGATAATACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SATSPVLCPPGCCHASCYNFDSI*VADNTS Trigger: GGAAGTATTATCAGCTACCAAGATGCTGTCAAAGTT...ATAGCAGGAAGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS-3UTR CAA 90 bp | GTAGAACTCTCAGCTACTTCTCCAGTGCTCTGCCCTCCTGGATGCTGCCACGCTAACTATTTCCATCCTTaGCATTCTTGGGTACGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VELSATSPVLCPPGCCHANYFHP*HSWVRD Trigger: ATCTCGTACCCAAGAATGCAAAGGATGGAAATAGTT...AGCGTGGCAGCATCCAGGAGGGCAGAGCACTGGAGAAGTAGCTGAGAGTTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| CDS-3UTR CAA 90 bp | GGTCCACATGTGAAAGATGGCAGTTTTCACATGGTAGGAACAGAATGCATCCAGGGCTCTCGTCTTAGATaGGTCCTCACTTTTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPHVKDGSFHMVGTECIQGSRLR*VLTFVP Trigger: GGGCACAAAAGTGAGGACCAATCTAAGACGAGAGCC...CTGGATGCATTCTGTTCCTACCATGTGAAAACTGCCATCTTTCACATGTGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034898.14 |
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| CDS-3UTR CAA 90 bp | AATCCCTGCATTCCAATGGCAGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCGCGCCAGGTCTCTCCTaGAAAACTATTTCCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NPCIPMAEAGRSLCSRPAAPGLS*KTISIL Trigger: AAGGATGGAAATAGTTTTCAAGGAGAGACCTGGCGC...GGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCTGCCATTGGAATGCAGGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| CDS-3UTR CAA 90 bp | AGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCTGGTCTACAGAGGGAGTTACGCGCCAGGTCTCTCCTaGAAAACTATTTCCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSRQISLFKTSLVYRGSYAPGLS*KTISIL Trigger: AAGGATGGAAATAGTTTTCAAGGAGAGACCTGGCGC...GTAACTCCCTCTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| CDS-3UTR CAA 90 bp | GTGATGTCCATCTGTCATCCCAGAGTTGGGGCAGCAGAGGCAGCTGAATCCCAGGAAGCAAAGAAAGGGTaGATCCATTTTCTCTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VMSICHPRVGAAEAAESQEAKKG*IHFLFD Trigger: ATCAAAGAGAAAATGGATCAACCCTTTCTTTGCTTC...CTGGGATTCAGCTGCCTCTGCTGCCCCAACTCTGGGATGACAGATGGACATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127190.2 |
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| CDS-3UTR CAA 90 bp | GGCAGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCTGGTCTACAGAGGGAGTAACTTTGACAGCATCTaGGTAGCTGATAATACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRSRQISLFKTSLVYRGSNFDSI*VADNTS Trigger: GGAAGTATTATCAGCTACCAAGATGCTGTCAAAGTT...ACTCCCTCTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS-3UTR CAA 90 bp | TTCCAATGGCAGAAGCAGGCAGATCTCTTTGTTCAAGACCAGCCTGGTCTACAGAACTATTTCCATCCTTaGCATTCTTGGGTACGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FQWQKQADLFVQDQPGLQNYFHP*HSWVRD Trigger: ATCTCGTACCCAAGAATGCAAAGGATGGAAATAGTT...CTGTAGACCAGGCTGGTCTTGAACAAAGAGATCTGCCTGCTTCTGCCATTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| CDS-3UTR CAA 90 bp | CTGGGTCCACATGTGAAAGATGGCAGTTTTCACATGGTAGGAACAGAATGCATCGCCTCCGAGATATCTTaGCGTTTCAATCTCAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGPHVKDGSFHMVGTECIASEIS*RFNLNL Trigger: CAAATTGAGATTGAAACGCAAAGATATCTCGGAGGC...GATGCATTCTGTTCCTACCATGTGAAAACTGCCATCTTTCACATGTGGACCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000127190.2 |
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| CDS-3UTR CAA 90 bp | CAAAGAGAACATCAGCCATTTAATAGACACACTAGCCATATGGGGTGTGTGTCAGCCTCCGAGATATCTTaGCGTTTCAATCTCAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: QREHQPFNRHTSHMGCVSASEIS*RFNLNL Trigger: CAAATTGAGATTGAAACGCAAAGATATCTCGGAGGC...TGACACACACCCCATATGGCTAGTGTGTCTATTAAATGGCTGATGTTCTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| CDS-3UTR CAA 90 bp | ACTTACATCACTTTAACCCAATTTGATTTCAGAAGGCAATGTCAGGCTGGGAAGGCCTCCGAGATATCTTaGCGTTTCAATCTCAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: TYITLTQFDFRRQCQAGKASEIS*RFNLNL Trigger: CAAATTGAGATTGAAACGCAAAGATATCTCGGAGGC...CTTCCCAGCCTGACATTGCCTTCTGAAATCAAATTGGGTTAAAGTGATGTAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS TCA 90 bp | TTTGACAGCATCTTGGTAGCTGATAATACTTCCCCTTCTAAGAAATaGCTCAGCGGATTTCCTCGTGGAATTCTTTTGAATTTCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FDSILVADNTSPSKK*LSGFPRGILLNFTR Trigger: TCTTGTGAAATTCAAAAGAATTCCACGAGGAAATCCGCTGAGTCATTTCTTAGAAGGGGAAGTATTATCAGCTACCAAGATGCTGTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS TCA 90 bp | CCCCTTCTAAGAAATGACTCAGCGGATTTCCTCGTGGAATTCTTTTaGATTTCACAAGATAGAAAGCACCTGTTTCATAATATTCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLLRNDSADFLVEFF*ISQDRKHLFHNILV Trigger: TACAAGAATATTATGAAACAGGTGCTTTCTATCTTGTGAAATTCAAAAGAATTCCACGAGGAAATCCGCTGAGTCATTTCTTAGAAGGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS GCA 72 bp | TCCCGTACGGCGGGCAGCTCCGGATCCAGGATGGCCTaGTGCTGGGGCACCCGGACGGCAGGCCGCGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SRTAGSSGSRMA*CWGTRTAGRAV Trigger: CACCGCGCGGCCTGCCGTCCGGGTGCCCCAGCAGCAGGCCATCCTGGATCCGGAGCTGCCCGCCGTACGGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS CCA 72 bp | CTTACGACTTTCCGCGCCTCGGGATCCGCGGGCGGCTaGGGCTCCCGTACGGCGGGCAGCTCCGGATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTTFRASGSAGG*GSRTAGSSGSR Trigger: CCTGGATCCGGAGCTGCCCGCCGTACGGGAGCCCCAGCCGCCCGCGGATCCCGAGGCGCGGAAAGTCGTAAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS CCA 72 bp | GCTCTGGGCTGCCCGGTGGAGCGCGCGCCCCTTCTGTaGCTAGGTCCCCTTACGACTTTCCGCGCCTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALGCPVERAPLL*LGPLTTFRASG Trigger: TCCCGAGGCGCGGAAAGTCGTAAGGGGACCTAGCCACAGAAGGGGCGCGCGCTCCACCGGGCAGCCCAGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS GCA 72 bp | CGAGGGCTGTGCATCTTTGGTGAGCTCAGTGGCCCTTaGTGGATGCACTCGGGGCCCTGGGGCACGTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RGLCIFGELSGP*WMHSGPWGTWL Trigger: AAGCCACGTGCCCCAGGGCCCCGAGTGCATCCAGCAAGGGCCACTGAGCTCACCAAAGATGCACAGCCCTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
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| CDS CCA 72 bp | GGGCTGTGCATCTTTGGTGAGCTCAGTGGCCCTTGCTaGATGCACTCGGGGCCCTGGGGCACGTGGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLCIFGELSGPC*MHSGPWGTWLL Trigger: GAGAAGCCACGTGCCCCAGGGCCCCGAGTGCATCCAGCAAGGGCCACTGAGCTCACCAAAGATGCACAGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 |
||
| CDS CCA 72 bp | TGTCCAGCACCTTCTTTAGCTTGTCCGGTTCCTTCCTaGACCCTCGCGGCGCTCTGGGCTGCCCGGTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CPAPSLACPVPS*TLAALWAARWS Trigger: GCTCCACCGGGCAGCCCAGAGCGCCGCGAGGGTCCAGGAAGGAACCGGACAAGCTAAAGAAGGTGCTGGACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS CAA 90 bp | ATATCTTTGCGTTTCAATCTCAATTTGTCCAGCACCTTCTTTAGCTaGTCCGGTTCCTTCCTGGACCCTCGCGGCGCTCTGGGCTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ISLRFNLNLSSTFFS*SGSFLDPRGALGCP Trigger: CGGGCAGCCCAGAGCGCCGCGAGGGTCCAGGAAGGAACCGGACAAGCTAAAGAAGGTGCTGGACAAATTGAGATTGAAACGCAAAGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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| CDS TCA 72 bp | CATAGTAGCTGCCAGTGTTCAGCTGCTCCACACCTTTaGACTCCGACTCCCGTTTCTGCATTCTGCGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HSSCQCSAAPHL*TPTPVSAFCAA Trigger: TGCTGCGCAGAATGCAGAAACGGGAGTCGGAGTTCAAAGGTGTGGAGCAGCTGAACACTGGCAGCTACTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
||
| CDS TCA 72 bp | ATCTTGGTAGCTGATAATACTTCCCCTTCTAAGAAATaGCTCAGCGGATTTCCTCGTGGAATTCTTTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: ILVADNTSPSKK*LSGFPRGILLN Trigger: ATTCAAAAGAATTCCACGAGGAAATCCGCTGAGTCATTTCTTAGAAGGGGAAGTATTATCAGCTACCAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034898.14 ENSMUST00000070742.14 ENSMUST00000127190.2 |
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