Pregenerated sensors for CFTR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041301Ensembl transcript IDs: ENSMUST00000045706.12, ENSMUST00000115405.9, ENSMUST00000115406.2, ENSMUST00000129452.8, ENSMUST00000140407.8
Found 368 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCAGGTGCCCAGCCTGGAACTCTCTTTGTGGGCTAGGATCACTTaGCACAGAGCCCCAGGGATCCACCTGTCTCTGTGTCCCCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: PQVPSLELSLWARIT*HRAPGIHLSLCPQH Trigger: GTGCTGGGGACACAGAGACAGGTGGATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGAGTTCCAGGCTGGGCACCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CCA 90 bp | TCCACAGGTATTGTCCCTCAGGTGCCCAGCCTGGAACTCTCTTTGTaGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCCACCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: STGIVPQVPSLELSL*ARITCHRAPGIHLS Trigger: AGACAGGTGGATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGAGTTCCAGGCTGGGCACCTGAGGGACAATACCTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CCA 90 bp | GCAGTAATTTGCGTCCGAGGCTTGTGCTTGCTGGAGTGGCGGCCCTaGAAGAACCTCATCTTTTCCGAGGAGCTAATGGCCTGCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: AVICVRGLCLLEWRP*KNLIFSEELMACWK Trigger: CTTCCAGCAGGCCATTAGCTCCTCGGAAAAGATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATTACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CCA 90 bp | TCTTTCAGAGCAGTAATTTGCGTCCGAGGCTTGTGCTTGCTGGAGTaGCGGCCCTGGAAGAACCTCATCTTTTCCGAGGAGCTAATGGCC | + |
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Preference number: 1 (lower is better) Translates to: SFRAVICVRGLCLLE*RPWKNLIFSEELMA Trigger: GGCCATTAGCTCCTCGGAAAAGATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATTACTGCTCTGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR GCA 90 bp | TCTTCTGTCTCCTCTTTCAGAGCAGTAATTTGCGTCCGAGGCTTGTaGTTGCTGGAGTGGCGGCCCTGGAAGAACCTCATCTTTTCCGAG | + |
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Preference number: 1 (lower is better) Translates to: SSVSSFRAVICVRGL*LLEWRPWKNLIFSE Trigger: CTCGGAAAAGATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATTACTGCTCTGAAAGAGGAGACAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR GCA 90 bp | CGAGGAGCTAATGGCCTGCTGGAAGATACTCTTCTCACTCAGAAGTaGCTGAAGGGAGTCGTACTGCCAGACATTGCTCTCTTCTATGAC | + |
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Preference number: 1 (lower is better) Translates to: RGANGLLEDTLLTQK*LKGVVLPDIALFYD Trigger: GTCATAGAAGAGAGCAATGTCTGGCAGTACGACTCCCTTCAGGCACTTCTGAGTGAGAAGAGTATCTTCCAGCAGGCCATTAGCTCCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR TCA 90 bp | GAGCTAATGGCCTGCTGGAAGATACTCTTCTCACTCAGAAGTGCCTaGAGGGAGTCGTACTGCCAGACATTGCTCTCTTCTATGACCAAA | + |
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Preference number: 1 (lower is better) Translates to: ELMACWKILFSLRSA*RESYCQTLLSSMTK Trigger: TTTGGTCATAGAAGAGAGCAATGTCTGGCAGTACGACTCCCTTCAGGCACTTCTGAGTGAGAAGAGTATCTTCCAGCAGGCCATTAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR GCA 90 bp | TTTTCATTCTGCATGGGTTCTGGGAATGGACTCAGTGCACTGAGTTaGTTCCTCAGCATCCCAGCACTAGAGACGGGTTTCTTGAACTTC | + |
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Preference number: 1 (lower is better) Translates to: FSFCMGSGNGLSALS*FLSIPALETGFLNF Trigger: GAAGTTCAAGAAACCCGTCTCTAGTGCTGGGATGCTGAGGAAGCAACTCAGTGCACTGAGTCCATTCCCAGAACCCATGCAGAATGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CCA 90 bp | CGGAAGGCTCGAAGTGTCCAGAGTCCTTTTAAGCTTGTCACAAGGTaGGTGAAAATTGGACTCCTGCCTTCAGATTCCAGTTGTTTGAGC | + |
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Preference number: 1 (lower is better) Translates to: RKARSVQSPFKLVTR*VKIGLLPSDSSCLS Trigger: GCTCAAACAACTGGAATCTGAAGGCAGGAGTCCAATTTTCACCCACCTTGTGACAAGCTTAAAAGGACTCTGGACACTTCGAGCCTTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CCA 90 bp | ACTGTGCAACCAGCGAAGGCTTGTTTTAGAACTCGTCGAATGACTTaGTATGTTATGGGGTCTAGATGGGCACTGGGCTCATCAAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: TVQPAKACFRTRRMT*YVMGSRWALGSSSS Trigger: ACTGCTTGATGAGCCCAGTGCCCATCTAGACCCCATAACATACCAAGTCATTCGACGAGTTCTAAAACAAGCCTTCGCTGGTTGCACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR GCA 90 bp | CCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTaGATTAAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGG | + |
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Preference number: 1 (lower is better) Translates to: PSGGRLNLWYHLLQS*IKREHVLSENHTDG Trigger: CCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTTAATGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR TCA 90 bp | TCCCCAACAACTCTGTGGAGACAGTTTGAAGTACACACAGCTAGCTaGGAGCACATGAACATACTACTGCACATTTCCATGAGCATCTAC | + |
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Preference number: 1 (lower is better) Translates to: SPTTLWRQFEVHTAS*EHMNILLHISMSIY Trigger: GTAGATGCTCATGGAAATGTGCAGTAGTATGTTCATGTGCTCTCAGCTAGCTGTGTGTACTTCAAACTGTCTCCACAGAGTTGTTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CCA 90 bp | TGTTTTAGAACTCGTCGAATGACTTGGTATGTTATGGGGTCTAGATaGGCACTGGGCTCATCAAGCAGTATGATCTTGGCCTTACTGAGA | + |
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Preference number: 1 (lower is better) Translates to: CFRTRRMTWYVMGSR*ALGSSSSMILALLR Trigger: TCTCAGTAAGGCCAAGATCATACTGCTTGATGAGCCCAGTGCCCATCTAGACCCCATAACATACCAAGTCATTCGACGAGTTCTAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR GCA 90 bp | ATCCAAAATTGCTATATCTTTGGAGAATCTGTTAAGAATCCCACCTaGTTTCAGCTTGCTGATGGTCGACATAGGGGCGTGAAGAATGGA | + |
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Preference number: 1 (lower is better) Translates to: IQNCYIFGESVKNPT*FQLADGRHRGVKNG Trigger: TCCATTCTTCACGCCCCTATGTCGACCATCAGCAAGCTGAAAGCAGGTGGGATTCTTAACAGATTCTCCAAAGATATAGCAATTTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CCA 90 bp | AGAAAAACCAGTACGCACCAAATCAGCACTAGCAGTAAGCCTTTATaGAGAGTAAAATATCGTAGGTATGTGTTCCATGTTGTCACCGGG | + |
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Preference number: 1 (lower is better) Translates to: RKTSTHQISTSSKPL*RVKYRRYVFHVVTG Trigger: CCCGGTGACAACATGGAACACATACCTACGATATTTTACTCTCCATAAAGGCTTACTGCTAGTGCTGATTTGGTGCGTACTGGTTTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR TCA 90 bp | ACTGGCCTAGAACTCATTAGACAGCTAAGACTGGCTTCAACTTCATaGCCTTTTTGCTTCAGTCTCTTGAGTATTAGGATTGCACTCATG | + |
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Preference number: 1 (lower is better) Translates to: TGLELIRQLRLASTS*PFCFSLLSIRIALM Trigger: CATGAGTGCAATCCTAATACTCAAGAGACTGAAGCAAAAAGGTCATGAAGTTGAAGCCAGTCTTAGCTGTCTAATGAGTTCTAGGCCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
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| 3UTR GCA 90 bp | GAGGACAAATATCATGTCTATTCTCATTTGGAACCAGCGCAAGGTTaGCAGATACATAAACCAGTTGGCAGTGTGCAAATTCAGAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: EDKYHVYSHLEPAQG*QIHKPVGSVQIQSF Trigger: AAAGCTCTGAATTTGCACACTGCCAACTGGTTTATGTATCTGGCAACCTTGCGCTGGTTCCAAATGAGAATAGACATGATATTTGTCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CCA 90 bp | GTAACAACAATGAAGAAGAGGACAAATATCATGTCTATTCTCATTTaGAACCAGCGCAAGGTTGCCAGATACATAAACCAGTTGGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: VTTMKKRTNIMSILI*NQRKVARYINQLAV Trigger: CACTGCCAACTGGTTTATGTATCTGGCAACCTTGCGCTGGTTCCAAATGAGAATAGACATGATATTTGTCCTCTTCTTCATTGTTGTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR TCA 90 bp | GTAGTAGAGTTCACCTCCTCTAAGTCCATGAGCAGACTCCATACATaGTCGTTTTGCAATTATTTGCACTATTTTCTTCCCTCTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: VVEFTSSKSMSRLHT*SFCNYLHYFLPSFL Trigger: AAGGAAAGAGGGAAGAAAATAGTGCAAATAATTGCAAAACGATCATGTATGGAGTCTGCTCATGGACTTAGAGGAGGTGAACTCTACTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CCA 90 bp | CGTAAGGTCTCAGTTAGAATTGAACTTCTTCTTTCCTCAGTAAACTaGTCAAAAGTATCATACCCCATGAGTTTCGAACTGAAGTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: RKVSVRIELLLSSVN*SKVSYPMSFELKSG Trigger: TCCAGACTTCAGTTCGAAACTCATGGGGTATGATACTTTTGACCAGTTTACTGAGGAAAGAAGAAGTTCAATTCTAACTGAGACCTTACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CCA 90 bp | AATGAGCATAATCCATGTAGTGGTGTGAACGTGAAATACCTACAATaGGCTCATGTGTTTGAAAACATTATTTCCAGTTGGGGGTACACT | + |
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Preference number: 1 (lower is better) Translates to: NEHNPCSGVNVKYLQ*AHVFENIISSWGYT Trigger: AGTGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAGGTATTTCACGTTCACACCACTACATGGATTATGCTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
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| 3UTR TCA 90 bp | AGAAAAATCTGCCTTGCAATACACAAGTGGTCATTATCAACTATCTaGAGTTCAAACAATTTGACTACTGCTGGAAAGTCAGTTACCCAT | + |
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Preference number: 1 (lower is better) Translates to: RKICLAIHKWSLSTI*SSNNLTTAGKSVTH Trigger: ATGGGTAACTGACTTTCCAGCAGTAGTCAAATTGTTTGAACTTCAGATAGTTGATAATGACCACTTGTGTATTGCAAGGCAGATTTTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR TCA 90 bp | GTCGATTTCCATATCAAGGAAATTATCCAGGCCACTTTATGGGACTaGAACAGTTCTTTTCCTAGGTCTTATTCTGGTAATAAGAATGTT | + |
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Preference number: 1 (lower is better) Translates to: VDFHIKEIIQATLWD*NSSFPRSYSGNKNV Trigger: AACATTCTTATTACCAGAATAAGACCTAGGAAAAGAACTGTTTCAGTCCCATAAAGTGGCCTGGATAATTTCCTTGATATGGAAATCGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR GCA 90 bp | AATTTGCGTCCGAGGCTTGTGCTTGCTGGAGTGGCGGCCCTGGAAGAACCTCATCTCAGTGCACTGAGTTaGTTCCTCAGCATCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: NLRPRLVLAGVAALEEPHLSALS*FLSIPA Trigger: TGCTGGGATGCTGAGGAAGCAACTCAGTGCACTGAG...ATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR CCA 90 bp | AATTTGCGTCCGAGGCTTGTGCTTGCTGGAGTGGCGGCCCTGGAAGAACCTCATCTACATGTTAACTCCTaGACCTGGCACTGGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: NLRPRLVLAGVAALEEPHLHVNS*TWHWAA Trigger: TGCAGCCCAGTGCCAGGTCCAGGAGTTAACATGTAG...ATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CAA 90 bp | TCTGTCTCCTCTTTCAGAGCAGTAATTTGCGTCCGAGGCTTGTGCTaGCTGGAGTGGCGGCCCTGGAAGAACCTCATCTTTTCCGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SVSSFRAVICVRGLC*LEWRPWKNLIFSEE Trigger: CTCCTCGGAAAAGATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATTACTGCTCTGAAAGAGGAGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCAAGAGTATATCCACAGGTATTGTCCCTCAGGTGCCCAGCCTGGAACTCTCTGGGCTAGGATCACTTaGCACAGAGCCCCAGGGATC | + |
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Preference number: 2 (lower is better) Translates to: KQEYIHRYCPSGAQPGTLWARIT*HRAPGI Trigger: GATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCA...GAGAGTTCCAGGCTGGGCACCTGAGGGACAATACCTGTGGATATACTCTTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCCACCTGTCTCTACTGCACATTTCCATaGGCATCTACCCACACAGTC | + |
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Preference number: 2 (lower is better) Translates to: SLCGLGSLATEPQGSTCLYCTFP*ASTHTV Trigger: GACTGTGTGGGTAGATGCTCATGGAAATGTGCAGTA...GAGACAGGTGGATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CAA 90 bp | TCTTCTTCTGTCTCCTCTTTCAGAGCAGTAATTTGCGTCCGAGGCTaGTGCTTGCTGGAGTGGCGGCCCTGGAAGAACCTCATCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: SSSVSSFRAVICVRG*CLLEWRPWKNLIFS Trigger: GGAAAAGATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATTACTGCTCTGAAAGAGGAGACAGAAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCAATGGACTCAGTGCACTaGGTTGCTTCCTCAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: CAHQGAVLTFGTIFFKAAMDSVH*VASSAS Trigger: GGATGCTGAGGAAGCAACTCAGTGCACTGAGTCCAT...TGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAAGTCTGGCGTCGGAAGGCTCGAAGTGTCCAGAGTCCTTTTAAGCTTGTCACTCAGGTGCCCAGCCTaGAACTCTCTTTGTGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: SKSGVGRLEVSRVLLSLSLRCPA*NSLCGL Trigger: TAGCCCACAAAGAGAGTTCCAGGCTGGGCACCTGAG...TGACAAGCTTAAAAGGACTCTGGACACTTCGAGCCTTCCGACGCCAGACTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CAA 90 bp | GGTTTCTTGAACTTCTTCTTCTGTCTCCTCTTTCAGAGCAGTAATTaGCGTCCGAGGCTTGTGCTTGCTGGAGTGGCGGCCCTGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GFLNFFFCLLFQSSN*RPRLVLAGVAALEE Trigger: TTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATTACTGCTCTGAAAGAGGAGACAGAAGAAGAAGTTCAAGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR CCA 90 bp | CCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCATTAAACTGTCTTCTTCTGCCTaGAAATGTGGGGCCGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: PSGGRLNLWYHLLQSCIKLSSSA*KCGAGG Trigger: GCCACCGGCCCCACATTTCCAGGCAGAAGAAGACAG...TTTAATGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCCACCTGTCTCAAATTTTTGATGCTGTaGTTAACGTATGCACCAGCG | + |
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Preference number: 2 (lower is better) Translates to: SLCGLGSLATEPQGSTCLKFLML*LTYAPA Trigger: CGCTGGTGCATACGTTAATCACAGCATCAAAAATTT...GAGACAGGTGGATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR GCA 90 bp | GACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGGGCATCCTCAGTGCACTGAGTTaGTTCCTCAGCATCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: DLDILNPDGLLDHQMSGILSALS*FLSIPA Trigger: TGCTGGGATGCTGAGGAAGCAACTCAGTGCACTGAG...GATGCCCGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAAGAGGCTCAGGGCAAGCAAAGTGTCAGCCACTCCCACGTAAATGTAAAATGGTCCTCTGAAGATTaGTGGAGCCTGAGTTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SEEAQGKQSVSHSHVNVKWSSED*WSLSWV Trigger: CACCCAACTCAGGCTCCAGCAATCTTCAGAGGACCA...TTTTACATTTACGTGGGAGTGGCTGACACTTTGCTTGCCCTGAGCCTCTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGCTGTCTTCTTCTGCCTaGAAATGTGGGGCCGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: FQDLDILNPDGLLDHQMSLSSSA*KCGAGG Trigger: GCCACCGGCCCCACATTTCCAGGCAGAAGAAGACAG...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CAA 90 bp | GTGTATATGTACTTGCATGTGGAAGCAAGAGTATATCCACAGGTATaGTCCCTCAGGTGCCCAGCCTGGAACTCTCTTTGTGGGCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: VYMYLHVEARVYPQV*SLRCPAWNSLCGLG Trigger: TCCTAGCCCACAAAGAGAGTTCCAGGCTGGGCACCTGAGGGACAATACCTGTGGATATACTCTTGCTTCCACATGCAAGTACATATACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR TCA 90 bp | AATCTAAATCTAGCAAGAAAGTACCACCCTATCTCACCCCCACCACCCCCAAAAACTAGAATTAGGCCTTaGAGCCCCACTTCCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NLNLARKYHPISPPPPPKTRIRP*SPTSCW Trigger: CCAGCAGGAAGTGGGGCTTCAAGGCCTAATTCTAGT...TTTTGGGGGTGGTGGGGGTGAGATAGGGTGGTACTTTCTTGCTAGATTTAGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGAAGAGGCTCAGGGCAAGCAAAGTGTCAGCCACTCCCACGTAAATGTAAAACATGGGTTCTGGGAATaGACTCAGTGCACTGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: SEEAQGKQSVSHSHVNVKHGFWE*TQCTEL Trigger: CAACTCAGTGCACTGAGTCCATTCCCAGAACCCATG...TTTTACATTTACGTGGGAGTGGCTGACACTTTGCTTGCCCTGAGCCTCTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR CCA 90 bp | GTCACAAGGTGGGTGAAAATTGGACTCCTGCCTTCAGATTCCAGTTGTTTGAGCCATGGGTTCTGGGAATaGACTCAGTGCACTGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: VTRWVKIGLLPSDSSCLSHGFWE*TQCTEL Trigger: CAACTCAGTGCACTGAGTCCATTCCCAGAACCCATG...GCTCAAACAACTGGAATCTGAAGGCAGGAGTCCAATTTTCACCCACCTTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR CCA 90 bp | GACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGTTCACAGAGGATCTACATGTTAACTCCTaGACCTGGCACTGGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: DQKSLAIQHRFYPVFTEDLHVNS*TWHWAA Trigger: TGCAGCCCAGTGCCAGGTCCAGGAGTTAACATGTAG...ATCCTCTGTGAACACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCACTGGGCTCATCAAGCAGTATGATCTTGGCCTTACTGAGAACTGATCGGAAGCTTGTCACAAGGTaGGTGAAAATTGGACTCCTG | + |
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Preference number: 2 (lower is better) Translates to: WALGSSSSMILALLRTDRKLVTR*VKIGLL Trigger: CAGGAGTCCAATTTTCACCCACCTTGTGACAAGCTT...CCGATCAGTTCTCAGTAAGGCCAAGATCATACTGCTTGATGAGCCCAGTGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| 3UTR CAA 90 bp | GTTATGGGGTCTAGATGGGCACTGGGCTCATCAAGCAGTATGATCTaGGCCTTACTGAGAACTGATCGGGCCAAGCACATTAATTGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: VMGSRWALGSSSSMI*ALLRTDRAKHINCL Trigger: TAAGCAATTAATGTGCTTGGCCCGATCAGTTCTCAGTAAGGCCAAGATCATACTGCTTGATGAGCCCAGTGCCCATCTAGACCCCATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 90 bp | TTTTTCATTCTGCATGGGTTCTGGGAATGGACTCAGTGCACTGAGTaGCTTCCTCAGCATCCCAGCACTAGAGACGGGTTTCTTGAACTT | + |
|
Preference number: 2 (lower is better) Translates to: FFILHGFWEWTQCTE*LPQHPSTRDGFLEL Trigger: AAGTTCAAGAAACCCGTCTCTAGTGCTGGGATGCTGAGGAAGCAACTCAGTGCACTGAGTCCATTCCCAGAACCCATGCAGAATGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTATTCTCATTTGGAACCAGCGCAAGGTTGCCAGATACATAAACCAGTTGGCAATGGACTCAGTGCACTaGGTTGCTTCCTCAGCATCC | + |
|
Preference number: 2 (lower is better) Translates to: SILIWNQRKVARYINQLAMDSVH*VASSAS Trigger: GGATGCTGAGGAAGCAACTCAGTGCACTGAGTCCAT...TGCCAACTGGTTTATGTATCTGGCAACCTTGCGCTGGTTCCAAATGAGAATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | CGTAGGTATGTGTTCCATGTTGTCACCGGGGGTATCTTGATCACATCATCAAGAAAGATTGCTGGAGCCTaGGTTGGGTGTGAACGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: RRYVFHVVTGGILITSSRKIAGA*VGCERH Trigger: ATGACGTTCACACCCAACTCAGGCTCCAGCAATCTT...TCTTGATGATGTGATCAAGATACCCCCGGTGACAACATGGAACACATACCTACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTGGGTGGGCTAGGATCACTTaGCACAGAGCCCCAGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: TNTTFLHFRSLKDLLLSGWARIT*HRAPGI Trigger: GATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCA...CCCAGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR GCA 90 bp | AATTTGCGTCCGAGGCTTGTGCTTGCTGGAGTGGCGGCCCTGGAAGAACCTCATATGTGTATATGTACTTaGATGTGGAAGCAAGAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: NLRPRLVLAGVAALEEPHMCICT*MWKQEY Trigger: ATACTCTTGCTTCCACATGCAAGTACATATACACAT...ATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCAGTGTGCAAATTCAGAGCTTTGTGGAACAGAGTTTCAAAGTAAGTCTGGCTGGTCCTCTGAAGATTaGTGGAGCCTGAGTTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: WQCANSELCGTEFQSKSGWSSED*WSLSWV Trigger: CACCCAACTCAGGCTCCAGCAATCTTCAGAGGACCA...GCCAGACTTACTTTGAAACTCTGTTCCACAAAGCTCTGAATTTGCACACTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCCTCAGGTGCCCAGCCTaGAACTCTCTTTGTGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: KREHVLSENHTDGYKIYILRCPA*NSLCGL Trigger: TAGCCCACAAAGAGAGTTCCAGGCTGGGCACCTGAG...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTGGACGTAGACTTTGTAGCTCAGAAAATGTCCCATAAAAATAGCTACTGCCTCAGGTGCCCAGCCTaGAACTCTCTTTGTGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: SLDVDFVAQKMSHKNSYCLRCPA*NSLCGL Trigger: TAGCCCACAAAGAGAGTTCCAGGCTGGGCACCTGAG...GCAGTAGCTATTTTTATGGGACATTTTCTGAGCTACAAAGTCTACGTCCAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCACAAGGTGGGTGAAAATTGGACTCCTGCCTTCAGATTCCAGTTGTTTGAGCTCCCCAACAACTCTGTaGAGACAGTTTGAAGTACAC | + |
|
Preference number: 2 (lower is better) Translates to: VTRWVKIGLLPSDSSCLSSPTTL*RQFEVH Trigger: GTGTACTTCAAACTGTCTCCACAGAGTTGTTGGGGA...GCTCAAACAACTGGAATCTGAAGGCAGGAGTCCAATTTTCACCCACCTTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCTTCTGCCTGGAAATGTaGGGCCGGTGGCGATCATGT | + |
|
Preference number: 2 (lower is better) Translates to: KREHVLSENHTDGYKIYIFCLEM*GRWRSC Trigger: ACATGATCGCCACCGGCCCCACATTTCCAGGCAGAA...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGCACTGGGCTCATCAAGCAGTATGATCTTGGCCTTACTGAGAACTGATCGGGTATGTCCACTAATGTaGATGCATGTGTATATGTAC | + |
|
Preference number: 2 (lower is better) Translates to: WALGSSSSMILALLRTDRVCPLM*MHVYMY Trigger: GTACATATACACATGCATGCACATTAGTGGACATAC...CCGATCAGTTCTCAGTAAGGCCAAGATCATACTGCTTGATGAGCCCAGTGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAGTGTGTCGATTTCCATATCAAGGAAATTATCCAGGCCACTTTATGGGACTTTCTGCCTGGAAATGTaGGGCCGGTGGCGATCATGT | + |
|
Preference number: 2 (lower is better) Translates to: ISVSISISRKLSRPLYGTFCLEM*GRWRSC Trigger: ACATGATCGCCACCGGCCCCACATTTCCAGGCAGAA...AGTCCCATAAAGTGGCCTGGATAATTTCCTTGATATGGAAATCGACACACTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAGTCGCAGGCTTCACCCTTCTTGCCACTTTATGGGACTaGAACAGTTCTTTTCCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: NSLPKQSLKEQVAGFTLLATLWD*NSSFPR Trigger: CCTAGGAAAAGAACTGTTTCAGTCCCATAAAGTGGC...AAGAAGGGTGAAGCCTGCGACTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTATTCTCATTTGGAACCAGCGCAAGGTTGCCAGATACATAAACCAGTTGGCAGCCACTTTATGGGACTaGAACAGTTCTTTTCCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: SILIWNQRKVARYINQLAATLWD*NSSFPR Trigger: CCTAGGAAAAGAACTGTTTCAGTCCCATAAAGTGGC...TGCCAACTGGTTTATGTATCTGGCAACCTTGCGCTGGTTCCAAATGAGAATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAAGATTGCTGGAGCCTaGGTTGGGTGTGAACGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: KREHVLSENHTDGYKIYIKIAGA*VGCERH Trigger: ATGACGTTCACACCCAACTCAGGCTCCAGCAATCTT...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTCTCAGTGCACTGAGTTaGTTCCTCAGCATCCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: CTNTTFLHFRSLKDLLLSLSALS*FLSIPA Trigger: TGCTGGGATGCTGAGGAAGCAACTCAGTGCACTGAG...AGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAGTCGCAGGCTTCACCCTTCTTGCCAAGCACATTAATTaGTTATGGCCATGGCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: NSLPKQSLKEQVAGFTLLAKHIN*LWPWLS Trigger: GCTAAGCCATGGCCATAAGCAATTAATGTGCTTGGC...AAGAAGGGTGAAGCCTGCGACTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR GCA 90 bp | AATACCTACAATGGGCTCATGTGTTTGAAAACATTATTTCCAGTTGGGGGTACACCATCTTCCCATTCCTaGCCCTCCTTTGCCAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: NTYNGLMCLKTLFPVGGTPSSHS*PSFAKM Trigger: CATCTTGGCAAAGGAGGGGCAGGAATGGGAAGATGG...TGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAGGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGCTGGAACTCTCTTTGTaGGCTAGGATCACTTGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: NFQDLDILNPDGLLDHQMLELSL*ARITCH Trigger: GTGGCAAGTGATCCTAGCCCACAAAGAGAGTTCCAG...CATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTCTACATGTTAACTCCTaGACCTGGCACTGGGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: CTNTTFLHFRSLKDLLLSLHVNS*TWHWAA Trigger: TGCAGCCCAGTGCCAGGTCCAGGAGTTAACATGTAG...AGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | GACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGGGCATCCTTTCCTCAGTAAACTaGTCAAAAGTATCATACCCC | + |
|
Preference number: 2 (lower is better) Translates to: DLDILNPDGLLDHQMSGILSSVN*SKVSYP Trigger: GGGGTATGATACTTTTGACCAGTTTACTGAGGAAAG...GATGCCCGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 90 bp | ATTCTCATTTGGAACCAGCGCAAGGTTGCCAGATACATAAACCAGTaGGCAGTGTGCAAATTCAGAGCTTTGTGGAACAGAGTTTCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: ILIWNQRKVARYINQ*AVCKFRALWNRVSK Trigger: CTTTGAAACTCTGTTCCACAAAGCTCTGAATTTGCACACTGCCAACTGGTTTATGTATCTGGCAACCTTGCGCTGGTTCCAAATGAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTGGGTACTGCACATTTCCATaGGCATCTACCCACACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TNTTFLHFRSLKDLLLSGYCTFP*ASTHTV Trigger: GACTGTGTGGGTAGATGCTCATGGAAATGTGCAGTA...CCCAGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGCCTGAGTTGGGTGTaGACGTCATCAGATCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KREHVLSENHTDGYKIYISLSWV*TSSDPK Trigger: TTTTGGATCTGATGACGTTCACACCCAACTCAGGCT...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTCATGGGTTCTGGGAATaGACTCAGTGCACTGAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: CTNTTFLHFRSLKDLLLSHGFWE*TQCTEL Trigger: CAACTCAGTGCACTGAGTCCATTCCCAGAACCCATG...AGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTCTGGAACTCTCTTTGTaGGCTAGGATCACTTGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: CTNTTFLHFRSLKDLLLSLELSL*ARITCH Trigger: GTGGCAAGTGATCCTAGCCCACAAAGAGAGTTCCAG...AGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | GACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGTTCACAGAGGATCAATTTGACTACTGCTaGAAAGTCAGTTACCCATAC | + |
|
Preference number: 2 (lower is better) Translates to: DQKSLAIQHRFYPVFTEDQFDYC*KVSYPY Trigger: GTATGGGTAACTGACTTTCCAGCAGTAGTCAAATTG...ATCCTCTGTGAACACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 90 bp | TCTAATACGGCATTTCCATCATCCATGTATTTCACAGTAAGGTCTTaGACAACCATTTCGCCTCCAGAGGGCCAGATATCACTTTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SNTAFPSSMYFTVRS*TTISPPEGQISLFF Trigger: GAAGAAAAGTGATATCTGGCCCTCTGGAGGCGAAATGGTTGTCAAAGACCTTACTGTGAAATACATGGATGATGGAAATGCCGTATTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGGAAGTTCAAACAATTTaGCTACTGCTGGAAAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: FQDLDILNPDGLLDHQMSEVQTI*LLLESQ Trigger: CTGACTTTCCAGCAGTAGTCAAATTGTTTGAACTTC...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGTTCACAGAGGATATGTACTTGCATGTaGAAGCAAGAGTATATCCAC | + |
|
Preference number: 2 (lower is better) Translates to: MTKNRWQSNIASILCSQRICTCM*KQEYIH Trigger: GTGGATATACTCTTGCTTCCACATGCAAGTACATAT...CCTCTGTGAACACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGCAATTTGACTACTGCTaGAAAGTCAGTTACCCATAC | + |
|
Preference number: 2 (lower is better) Translates to: FQDLDILNPDGLLDHQMSQFDYC*KVSYPY Trigger: GTATGGGTAACTGACTTTCCAGCAGTAGTCAAATTG...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCAGTGTGCAAATTCAGAGCTTTGTGGAACAGAGTTTCAAAGTAAGTCTGGCCAATTTGACTACTGCTaGAAAGTCAGTTACCCATAC | + |
|
Preference number: 2 (lower is better) Translates to: WQCANSELCGTEFQSKSGQFDYC*KVSYPY Trigger: GTATGGGTAACTGACTTTCCAGCAGTAGTCAAATTG...GCCAGACTTACTTTGAAACTCTGTTCCACAAAGCTCTGAATTTGCACACTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTCTTCTATGACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGATTCTAACATTTGCTTaGAATGGGGCAGACAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: ALFYDQKSLAIQHRFYPVILTFA*NGADNV Trigger: TACATTGTCTGCCCCATTCCAAGCAAATGTTAGAAT...CACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTCATAGAAGAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGTTCACAGAGGAGCAGTAAGCCTTTATaGAGAGTAAAATATCGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: MTKNRWQSNIASILCSQRSSKPL*RVKYRR Trigger: CCTACGATATTTTACTCTCCATAAAGGCTTACTGCT...CCTCTGTGAACACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCATTAAAAGCAGTAAGCCTTTATaGAGAGTAAAATATCGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: PSGGRLNLWYHLLQSCIKSSKPL*RVKYRR Trigger: CCTACGATATTTTACTCTCCATAAAGGCTTACTGCT...TTTAATGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 90 bp | GGTAACAACAATGAAGAAGAGGACAAATATCATGTCTATTCTCATTaGGAACCAGCGCAAGGTTGCCAGATACATAAACCAGTTGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GNNNEEEDKYHVYSH*EPAQGCQIHKPVGS Trigger: ACTGCCAACTGGTTTATGTATCTGGCAACCTTGCGCTGGTTCCAAATGAGAATAGACATGATATTTGTCCTCTTCTTCATTGTTGTTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTCAGATTCCAGTTGTTTaGGCTGCTGTGCTGTATGAA | + |
|
Preference number: 2 (lower is better) Translates to: CTNTTFLHFRSLKDLLLSQIPVV*AAVLYE Trigger: TTCATACAGCACAGCAGCTCAAACAACTGGAATCTG...AGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGATTCTAACATTTGCTTaGAATGGGGCAGACAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: FQDLDILNPDGLLDHQMSILTFA*NGADNV Trigger: TACATTGTCTGCCCCATTCCAAGCAAATGTTAGAAT...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTATGTCTATTCTCATTTaGAACCAGCGCAAGGTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: CTNTTFLHFRSLKDLLLSMSILI*NQRKVA Trigger: GGCAACCTTGCGCTGGTTCCAAATGAGAATAGACAT...AGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCGAAGTTCAAACAATTTaGCTACTGCTGGAAAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: KREHVLSENHTDGYKIYIEVQTI*LLLESQ Trigger: CTGACTTTCCAGCAGTAGTCAAATTGTTTGAACTTC...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACTAGTTTGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGATTAACCAGCTGTACTaGACAATAAGCCGAATGACT | + |
|
Preference number: 2 (lower is better) Translates to: ALVCTNTTFLHFRSLKDLINQLY*TISRMT Trigger: AGTCATTCGGCTTATTGTTCAGTACAGCTGGTTAAT...CAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCAAACTAGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAATACATATCTTAGAGGAAAGTAAGTTGGGCTTTGAGTTATATAAGACACTGAGCCTGAGTTGGGTGTaGACGTCATCAGATCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: AIHILEESKLGFELYKTLSLSWV*TSSDPK Trigger: TTTTGGATCTGATGACGTTCACACCCAACTCAGGCT...CAGTGTCTTATATAACTCAAAGCCCAACTTACTTTCCTCTAAGATATGTATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCAAGTAAGACTTATTACTCCCTCCAATTCTTGCCCAGAAAAACTCTTCTAATCCTAGGGGGTCCTTaGCATGTTTACATTAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: KPSKTYYSLQFLPRKTLLILGGP*HVYINS Trigger: TGAGTTAATGTAAACATGTCAAGGACCCCCTAGGAT...TAGAAGAGTTTTTCTGGGCAAGAATTGGAGGGAGTAATAAGTCTTACTTGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGAACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAGTCGCAGGCTTCACCCTTATGTGTATATGTACTTaGATGTGGAAGCAAGAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: LNSLPKQSLKEQVAGFTLMCICT*MWKQEY Trigger: ATACTCTTGCTTCCACATGCAAGTACATATACACAT...AAGGGTGAAGCCTGCGACTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 90 bp | GATCACCAGATGTCGGGCATCTTTCAATCAATACCACCCAGTATTTaGTATAATATTCTAACATTTGCTTGGAATGGGGCAGACAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: DHQMSGIFQSIPPSI*YNILTFAWNGADNV Trigger: TACATTGTCTGCCCCATTCCAAGCAAATGTTAGAATATTATACAAAATACTGGGTGGTATTGATTGAAAGATGCCCGACATCTGGTGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 90 bp | TGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTaGCTTTCTGGGAACATAAGTGTGTCGATTTCCATATCAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: CTNTTFLHFRSLKDL*LSGNISVSISISRK Trigger: TTTCCTTGATATGGAAATCGACACACTTATGTTCCCAGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATGAAGTTCAAACAATTTaGCTACTGCTGGAAAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TQMGTRFTSARLHNMKLNEVQTI*LLLESQ Trigger: CTGACTTTCCAGCAGTAGTCAAATTGTTTGAACTTC...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATAAATTTTTGATGCTGTaGTTAACGTATGCACCAGCG | + |
|
Preference number: 2 (lower is better) Translates to: TQMGTRFTSARLHNMKLNKFLML*LTYAPA Trigger: CGCTGGTGCATACGTTAATCACAGCATCAAAAATTT...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGATATGTACTTGCATGTaGAAGCAAGAGTATATCCAC | + |
|
Preference number: 2 (lower is better) Translates to: NFQDLDILNPDGLLDHQMICTCM*KQEYIH Trigger: GTGGATATACTCTTGCTTCCACATGCAAGTACATAT...CATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCATTCTAACATTTGCTTaGAATGGGGCAGACAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: KREHVLSENHTDGYKIYIILTFA*NGADNV Trigger: TACATTGTCTGCCCCATTCCAAGCAAATGTTAGAAT...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATAGCAGACTCCATACATaGTCGTTTTGCAATTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: TQMGTRFTSARLHNMKLNSRLHT*SFCNYL Trigger: CAAATAATTGCAAAACGATCATGTATGGAGTCTGCT...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTAGCAGACTCCATACATaGTCGTTTTGCAATTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: CTNTTFLHFRSLKDLLLSSRLHT*SFCNYL Trigger: CAAATAATTGCAAAACGATCATGTATGGAGTCTGCT...AGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATCCATATGAACGTTTTTaGACTCTCTTCCAAAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: TQMGTRFTSARLHNMKLNPYERF*TLFQNS Trigger: ACTGTTTTGGAAGAGAGTTCAAAAACGTTCATATGG...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTCTTGCCCAGAAAAACTCTTCTAAAAACAGATCTGGTAACAAGCCCAGAACAATGGGCTCATGTGTTTaGAAACATTATTTCCAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: ILAQKNSSKNRSGNKPRTMGSCV*KHYFQL Trigger: CAACTGGAAATAATGTTTTCAAACACATGAGCCCAT...TGTTCTGGGCTTGTTACCAGATCTGTTTTTAGAAGAGTTTTTCTGGGCAAGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAAGTGTGTCGATTTCCATATCAAGGAAATTATCCAGGCCACTTTATGGGACTGTATGTCCACTAATGTaGATGCATGTGTATATGTAC | + |
|
Preference number: 2 (lower is better) Translates to: ISVSISISRKLSRPLYGTVCPLM*MHVYMY Trigger: GTACATATACACATGCATGCACATTAGTGGACATAC...AGTCCCATAAAGTGGCCTGGATAATTTCCTTGATATGGAAATCGACACACTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAATACATATCTTAGAGGAAAGTAAGTTGGGCTTTGAGTTATATAAGACACTGATTAACCAGCTGTACTaGACAATAAGCCGAATGACT | + |
|
Preference number: 2 (lower is better) Translates to: AIHILEESKLGFELYKTLINQLY*TISRMT Trigger: AGTCATTCGGCTTATTGTTCAGTACAGCTGGTTAAT...CAGTGTCTTATATAACTCAAAGCCCAACTTACTTTCCTCTAAGATATGTATTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAATACATATCTTAGAGGAAAGTAAGTTGGGCTTTGAGTTATATAAGACACTGATATGTACTTGCATGTaGAAGCAAGAGTATATCCAC | + |
|
Preference number: 2 (lower is better) Translates to: AIHILEESKLGFELYKTLICTCM*KQEYIH Trigger: GTGGATATACTCTTGCTTCCACATGCAAGTACATAT...CAGTGTCTTATATAACTCAAAGCCCAACTTACTTTCCTCTAAGATATGTATTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CCA 72 bp | TGCGTCCGAGGCTTGTGCTTGCTGGAGTGGCGGCCCTaGAAGAACCTCATCTTTTCCGAGGAGCTAATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: CVRGLCLLEWRP*KNLIFSEELMA Trigger: GGCCATTAGCTCCTCGGAAAAGATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCGGCAAACCTCTGAAGAGGCTCAGGGCAAGCAAAGTGTCAGCCACTCCCACGTATATCCACAGGTATaGTCCCTCAGGTGCCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QRQTSEEAQGKQSVSHSHVYPQV*SLRCPA Trigger: GGCTGGGCACCTGAGGGACAATACCTGTGGATATAC...GTGGGAGTGGCTGACACTTTGCTTGCCCTGAGCCTCTTCAGAGGTTTGCCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR GCA 72 bp | CCCAGCCTGGAACTCTCTTTGTGGGCTAGGATCACTTaGCACAGAGCCCCAGGGATCCACCTGTCTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PSLELSLWARIT*HRAPGIHLSLC Trigger: ACACAGAGACAGGTGGATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGAGTTCCAGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CCA 72 bp | ATTGTCCCTCAGGTGCCCAGCCTGGAACTCTCTTTGTaGGCTAGGATCACTTGCCACAGAGCCCCAGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: IVPQVPSLELSL*ARITCHRAPGI Trigger: GATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGAGTTCCAGGCTGGGCACCTGAGGGACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | AATTTGCGTCCGAGGCTTGTGCTTGCTGGAGTGGCGGCCCTGGAAGAACCTCATAACGACTGTTTGGGTTaGCTCCACGGGGCAGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NLRPRLVLAGVAALEEPHNDCLG*LHGAEE Trigger: TTCCTCTGCCCCGTGGAGCAAACCCAAACAGTCGTT...ATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CCA 72 bp | GATCCAAAACAGACTGTCTTCTTCTGCCTGGAAATGTaGGGCCGGTGGCGATCATGTTGCTGCGCGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DPKQTVFFCLEM*GRWRSCCCAAE Trigger: CTCTGCCGCGCAGCAACATGATCGCCACCGGCCCCACATTTCCAGGCAGAAGAAGACAGTCTGTTTTGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CCA 72 bp | GCAGTAATTTGCGTCCGAGGCTTGTGCTTGCTGGAGTaGCGGCCCTGGAAGAACCTCATCTTTTCCGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: AVICVRGLCLLE*RPWKNLIFSEE Trigger: CTCCTCGGAAAAGATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATTACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR GCA 72 bp | TCCTCTTTCAGAGCAGTAATTTGCGTCCGAGGCTTGTaGTTGCTGGAGTGGCGGCCCTGGAAGAACCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: SSFRAVICVRGL*LLEWRPWKNLI Trigger: GATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATTACTGCTCTGAAAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCCACCTGTCTCGCCTTCAGATTCCAGTaGTTTGAGCTGCTGTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLCGLGSLATEPQGSTCLAFRFQ*FELLCC Trigger: ACAGCACAGCAGCTCAAACAACTGGAATCTGAAGGC...GAGACAGGTGGATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR GCA 72 bp | TGCATGGGTTCTGGGAATGGACTCAGTGCACTGAGTTaGTTCCTCAGCATCCCAGCACTAGAGACGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CMGSGNGLSALS*FLSIPALETGF Trigger: GAAACCCGTCTCTAGTGCTGGGATGCTGAGGAAGCAACTCAGTGCACTGAGTCCATTCCCAGAACCCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CCA 72 bp | GTATATCCACAGGTATTGTCCCTCAGGTGCCCAGCCTaGAACTCTCTTTGTGGGCTAGGATCACTTGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: VYPQVLSLRCPA*NSLCGLGSLAT Trigger: TGTGGCAAGTGATCCTAGCCCACAAAGAGAGTTCCAGGCTGGGCACCTGAGGGACAATACCTGTGGATATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAAGAGGCTCAGGGCAAGCAAAGTGTCAGCCACTCCCACGTAAATGTAAAAACTCAGTGCACTGAGTaGCTTCCTCAGCATCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SEEAQGKQSVSHSHVNVKTQCTE*LPQHPS Trigger: GCTGGGATGCTGAGGAAGCAACTCAGTGCACTGAGT...TTTTACATTTACGTGGGAGTGGCTGACACTTTGCTTGCCCTGAGCCTCTTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCGGCAAACCTCTGAAGAGGCTCAGGGCAAGCAAAGTGTCAGCCACTCCCACCATGTGTATATGTACTaGCATGTGGAAGCAAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QRQTSEEAQGKQSVSHSHHVYMY*HVEARV Trigger: TACTCTTGCTTCCACATGCAAGTACATATACACATG...GTGGGAGTGGCTGACACTTTGCTTGCCCTGAGCCTCTTCAGAGGTTTGCCGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCATTAAAACTCAGTGCACTGAGTaGCTTCCTCAGCATCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PSGGRLNLWYHLLQSCIKTQCTE*LPQHPS Trigger: GCTGGGATGCTGAGGAAGCAACTCAGTGCACTGAGT...TTTAATGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCAGGACAGTCTCTTTTCTaGGAGATCATCAGACTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CAHQGAVLTFGTIFFKAAGQSLF*EIIRLS Trigger: GGAGAGTCTGATGATCTCCAAGAAAAGAGACTGTCC...TGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCCACCTGTCTCCCACTGTTAACAGGGTaGTTTTTAAGCAACCATAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLCGLGSLATEPQGSTCLPLLTG*FLSNHN Trigger: GTTATGGTTGCTTAAAAACAACCCTGTTAACAGTGG...GAGACAGGTGGATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CCA 72 bp | ACTCGTCGAATGACTTGGTATGTTATGGGGTCTAGATaGGCACTGGGCTCATCAAGCAGTATGATCTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TRRMTWYVMGSR*ALGSSSSMILA Trigger: GGCCAAGATCATACTGCTTGATGAGCCCAGTGCCCATCTAGACCCCATAACATACCAAGTCATTCGACGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CCA 72 bp | CCAGCGAAGGCTTGTTTTAGAACTCGTCGAATGACTTaGTATGTTATGGGGTCTAGATGGGCACTGGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PAKACFRTRRMT*YVMGSRWALGS Trigger: TGAGCCCAGTGCCCATCTAGACCCCATAACATACCAAGTCATTCGACGAGTTCTAAAACAAGCCTTCGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR TCA 72 bp | TGCAACCAGCGAAGGCTTGTTTTAGAACTCGTCGAATaGCTTGGTATGTTATGGGGTCTAGATGGGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: CNQRRLVLELVE*LGMLWGLDGHW Trigger: CCAGTGCCCATCTAGACCCCATAACATACCAAGTCATTCGACGAGTTCTAAAACAAGCCTTCGCTGGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR GCA 72 bp | GTTAACTCCTGGACCTGGCACTGGGCTGCACTAGTTTaGACTAACACAACCTTCCTTCACTTCAGAAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VNSWTWHWAALV*TNTTFLHFRSL Trigger: AAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCAAACTAGTGCAGCCCAGTGCCAGGTCCAGGAGTTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR GCA 72 bp | TTTTTCATTCTGCATGGGTTCTGGGAATGGACTCAGTaGACTGAGTTGCTTCCTCAGCATCCCAGCACTAGA | + |
|
Preference number: 3 (lower is better) Translates to: FFILHGFWEWTQ*TELLPQHPSTR Trigger: TCTAGTGCTGGGATGCTGAGGAAGCAACTCAGTGCACTGAGTCCATTCCCAGAACCCATGCAGAATGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGTTCACAGAGGGCCTTCAGATTCCAGTaGTTTGAGCTGCTGTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: MTKNRWQSNIASILCSQRAFRFQ*FELLCC Trigger: ACAGCACAGCAGCTCAAACAACTGGAATCTGAAGGC...CCTCTGTGAACACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGCCCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCTATTCTAACATTTGCTaGGAATGGGGCAGACAATGT | + |
|
Preference number: 3 (lower is better) Translates to: MCPSGGRLNLWYHLLQSCYSNIC*EWGRQC Trigger: ACATTGTCTGCCCCATTCCAAGCAAATGTTAGAATA...GCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGTGTGCAAATTCAGAGCTTTGTGGAACAGAGTTTCAAAGTAAGTCTGGCGGGACAGTCTCTTTTCTaGGAGATCATCAGACTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSVQIQSFVEQSFKVSLAGQSLF*EIIRLS Trigger: GGAGAGTCTGATGATCTCCAAGAAAAGAGACTGTCC...CGCCAGACTTACTTTGAAACTCTGTTCCACAAAGCTCTGAATTTGCACACTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTCTTCTATGACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGCATGTCTATTCTCATTaGGAACCAGCGCAAGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ALFYDQKSLAIQHRFYPVHVYSH*EPAQGC Trigger: GCAACCTTGCGCTGGTTCCAAATGAGAATAGACATG...CACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTCATAGAAGAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR TCA 72 bp | GAAGGGAGTCGTACTGCCAGACATTGCTCTCTTCTATaGCCAAAAATCGCTGGCAATCCAACATCGCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: EGSRTARHCSLL*PKIAGNPTSLL Trigger: TAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTCATAGAAGAGAGCAATGTCTGGCAGTACGACTCCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR GCA 72 bp | TTCCTGTGCAAAATTTTTGATGCTGTGATTAACGTATaGACCAGCGGCAAACCTCTGAAGAGGCTCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FLCKIFDAVINV*TSGKPLKRLRA Trigger: TGCCCTGAGCCTCTTCAGAGGTTTGCCGCTGGTGCATACGTTAATCACAGCATCAAAAATTTTGCACAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR GCA 72 bp | TGCTATATCTTTGGAGAATCTGTTAAGAATCCCACCTaGTTTCAGCTTGCTGATGGTCGACATAGGGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: CYIFGESVKNPT*FQLADGRHRGV Trigger: CACGCCCCTATGTCGACCATCAGCAAGCTGAAAGCAGGTGGGATTCTTAACAGATTCTCCAAAGATATAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR GCA 72 bp | CCATCCACAAGGGTAAAGTTGAGCTGTCCAGGAAACTaGTCTATTACAGACTTGAGTCCAACCTCATCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSTRVKLSCPGN*SITDLSPTSSA Trigger: TGCAGATGAGGTTGGACTCAAGTCTGTAATAGAGCAGTTTCCTGGACAGCTCAACTTTACCCTTGTGGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CCA 72 bp | CGAAGTGTCCAGAGTCCTTTTAAGCTTGTCACAAGGTaGGTGAAAATTGGACTCCTGCCTTCAGATTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RSVQSPFKLVTR*VKIGLLPSDSS Trigger: ACTGGAATCTGAAGGCAGGAGTCCAATTTTCACCCACCTTGTGACAAGCTTAAAAGGACTCTGGACACTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATACTCAGTGCACTGAGTaGCTTCCTCAGCATCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TQMGTRFTSARLHNMKLNTQCTE*LPQHPS Trigger: GCTGGGATGCTGAGGAAGCAACTCAGTGCACTGAGT...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATGTATATCCACAGGTATaGTCCCTCAGGTGCCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TQMGTRFTSARLHNMKLNVYPQV*SLRCPA Trigger: GGCTGGGCACCTGAGGGACAATACCTGTGGATATAC...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGCCCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCAGTCTTAAAGATCTGTaGCTTTCTGGGAACATAAGT | + |
|
Preference number: 3 (lower is better) Translates to: MCPSGGRLNLWYHLLQSCSLKDL*LSGNIS Trigger: ACTTATGTTCCCAGAAAGCAACAGATCTTTAAGACT...GCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR TCA 72 bp | AATAGAAGTTCTGGTCCTCTGAAGATTGCTGGAGCCTaGGTTGGGTGTGAACGTCATCAGATCCAAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: NRSSGPLKIAGA*VGCERHQIQNR Trigger: TCTGTTTTGGATCTGATGACGTTCACACCCAACTCAGGCTCCAGCAATCTTCAGAGGACCAGAACTTCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR TCA 72 bp | ACTAAGGAGATTTTTCGAATAGAAGTTCTGGTCCTCTaGAGATTGCTGGAGCCTGAGTTGGGTGTGAACGTC | + |
|
Preference number: 3 (lower is better) Translates to: TKEIFRIEVLVL*RLLEPELGVNV Trigger: GACGTTCACACCCAACTCAGGCTCCAGCAATCTTCAGAGGACCAGAACTTCTATTCGAAAAATCTCCTTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR TCA 72 bp | GTGTCCAGAGTCCTTTTAAGCTTGTCACAAGGTGGGTaGAAATTGGACTCCTGCCTTCAGATTCCAGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VSRVLLSLSQGG*KLDSCLQIPVV Trigger: AACAACTGGAATCTGAAGGCAGGAGTCCAATTTTCACCCACCTTGTGACAAGCTTAAAAGGACTCTGGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CCA 72 bp | AAGTTGATGTGCCCATCAGGGGGCCGTCTTAACCTTTaGTACCATCTTCTTCAAAGCTGCATTAAAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KLMCPSGGRLNL*YHLLQSCIKRE Trigger: CTCTCTTTTAATGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACATCAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CCA 72 bp | TGCCAGACATTGCTCTCTTCTATGACCAAAAATCGCTaGCAATCCAACATCGCTTCTATCCTGTGTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: CQTLLSSMTKNR*QSNIASILCSQ Trigger: CTGTGAACACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTCATAGAAGAGAGCAATGTCTGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGGGCATCTCAGAAAAATCTGCCTaGCAATACACAAGTGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: DLDILNPDGLLDHQMSGISEKSA*QYTSGH Trigger: ATGACCACTTGTGTATTGCAAGGCAGATTTTTCTGA...GATGCCCGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAAGAGGCTCAGGGCAAGCAAAGTGTCAGCCACTCCCACGTAAATGTAAAAAGGTCTCAGTTAGAATaGAACTTCTTCTTTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SEEAQGKQSVSHSHVNVKRSQLE*NFFFPQ Trigger: CTGAGGAAAGAAGAAGTTCAATTCTAACTGAGACCT...TTTTACATTTACGTGGGAGTGGCTGACACTTTGCTTGCCCTGAGCCTCTTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCTAAATCTAGCAAGAAAGTACCACCCTATCTCACCCCCACCACCCCCAAAATACTCCCTCCAATTCTaGCCCAGAAAAACTCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: NLNLARKYHPISPPPPPKYSLQF*PRKTLL Trigger: TAGAAGAGTTTTTCTGGGCAAGAATTGGAGGGAGTA...TTTTGGGGGTGGTGGGGGTGAGATAGGGTGGTACTTTCTTGCTAGATTTAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| 3UTR TCA 72 bp | ACTCTGTGGAGACAGTTTGAAGTACACACAGCTAGCTaGGAGCACATGAACATACTACTGCACATTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: TLWRQFEVHTAS*EHMNILLHISM Trigger: CATGGAAATGTGCAGTAGTATGTTCATGTGCTCTCAGCTAGCTGTGTGTACTTCAAACTGTCTCCACAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR TCA 72 bp | ATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATaGTCCTTATCATCCCTGTCCTCCTCACTCCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: IYISSSSQHEVE*SLSSLSSSLPC Trigger: ACAGGGGAGTGAGGAGGACAGGGATGATAAGGATCATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR GCA 72 bp | GGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTaGATTAAAAGAGAGCATGTGTTGTCTGAGAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: GRLNLWYHLLQS*IKREHVLSENH Trigger: GTGGTTCTCAGACAACACATGCTCTCTTTTAATGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTAGGTATGTGTTCCATGTTGTCACCGGGGGTATCTTGATCACATCATCAAGACATGTGTATATGTACTaGCATGTGGAAGCAAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: RRYVFHVVTGGILITSSRHVYMY*HVEARV Trigger: TACTCTTGCTTCCACATGCAAGTACATATACACATG...TCTTGATGATGTGATCAAGATACCCCCGGTGACAACATGGAACACATACCTACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTAGGTATGTGTTCCATGTTGTCACCGGGGGTATCTTGATCACATCATCAAGATCAGAAAAATCTGCCTaGCAATACACAAGTGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RRYVFHVVTGGILITSSRSEKSA*QYTSGH Trigger: ATGACCACTTGTGTATTGCAAGGCAGATTTTTCTGA...TCTTGATGATGTGATCAAGATACCCCCGGTGACAACATGGAACACATACCTACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTCTTCTATGACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGATTGGGATCCAGGTTTaGTCTGAATGTTCCAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ALFYDQKSLAIQHRFYPVIGIQV*SECSRK Trigger: TTTTCTGGAACATTCAGACAAAACCTGGATCCCAAT...CACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTCATAGAAGAGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAGTCGCAGGCTTCACCCTTCTTTCTTTCCATTTTCCATaGGGATCCAGGTTTTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NSLPKQSLKEQVAGFTLLSFHFP*GSRFCL Trigger: CAGACAAAACCTGGATCCCAATGGAAAATGGAAAGA...AAGAAGGGTGAAGCCTGCGACTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR TCA 72 bp | GCTCACAGATCGCATCAAGCTATCTGTATCAATGCTTaGGTTCACAGCCCACTGCAAAGTACTCATGATATT | + |
|
Preference number: 3 (lower is better) Translates to: AHRSHQAICINA*VHSPLQSTHDI Trigger: AATATCATGAGTACTTTGCAGTGGGCTGTGAACTCAAGCATTGATACAGATAGCTTGATGCGATCTGTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR TCA 72 bp | TGTGAACGTGAAATACCTACAATGGGCTCATGTGTTTaGAAACATTATTTCCAGTTGGGGGTACACTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CEREIPTMGSCV*KHYFQLGVHWG Trigger: ACCCCAGTGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAGGTATTTCACGTTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| 3UTR CCA 72 bp | TTGGGGGTACACTGGGGTAGGACAGTGTTTACAACTTaGAGCTTTACTGGAGAAAGTAAGCTACTAGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: LGVHWGRTVFTT*SFTGESKLLEL Trigger: TAATTCTAGTAGCTTACTTTCTCCAGTAAAGCTCCAAGTTGTAAACACTGTCCTACCCCAGTGTACCCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTATTCTCATTTGGAACCAGCGCAAGGTTGCCAGATACATAAACCAGTTGGCACTTCACAACATGAAGTaGAATGATCCTTATCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SILIWNQRKVARYINQLALHNMK*NDPYHP Trigger: GGGATGATAAGGATCATTCAACTTCATGTTGTGAAG...TGCCAACTGGTTTATGTATCTGGCAACCTTGCGCTGGTTCCAAATGAGAATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGTGTGCAAATTCAGAGCTTTGTGGAACAGAGTTTCAAAGTAAGTCTGGCCTTCACAACATGAAGTaGAATGATCCTTATCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: WQCANSELCGTEFQSKSGLHNMK*NDPYHP Trigger: GGGATGATAAGGATCATTCAACTTCATGTTGTGAAG...GCCAGACTTACTTTGAAACTCTGTTCCACAAAGCTCTGAATTTGCACACTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGAGTCTTAAAGATCTGTaGCTTTCTGGGAACATAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FQDLDILNPDGLLDHQMSSLKDL*LSGNIS Trigger: ACTTATGTTCCCAGAAAGCAACAGATCTTTAAGACT...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGCTTGCGATAATCTCCTaGAATATACATCCACTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: FQDLDILNPDGLLDHQMSLAIIS*NIHPLH Trigger: ATGAAGTGGATGTATATTCAAGGAGATTATCGCAAG...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTATTCTCATTTGGAACCAGCGCAAGGTTGCCAGATACATAAACCAGTTGGCAGAAATTTTAGTACCATaGTTTCCACTGTTAACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SILIWNQRKVARYINQLAEILVP*FPLLTG Trigger: CCCTGTTAACAGTGGAAACAATGGTACTAAAATTTC...TGCCAACTGGTTTATGTATCTGGCAACCTTGCGCTGGTTCCAAATGAGAATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGGAAATTTTAGTACCATaGTTTCCACTGTTAACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FQDLDILNPDGLLDHQMSEILVP*FPLLTG Trigger: CCCTGTTAACAGTGGAAACAATGGTACTAAAATTTC...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR TCA 72 bp | GTAGGTATGTGTTCCATGTTGTCACCGGGGGTATCTTaGTCACATCATCAAGAAAACACTCCTTTAAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: VGMCSMLSPGVS*SHHQENTPLNL Trigger: AAGATTTAAAGGAGTGTTTTCTTGATGATGTGATCAAGATACCCCCGGTGACAACATGGAACACATACCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CCA 72 bp | ATGAAGAAGAGGACAAATATCATGTCTATTCTCATTTaGAACCAGCGCAAGGTTGCCAGATACATAAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: MKKRTNIMSILI*NQRKVARYINQ Trigger: CTGGTTTATGTATCTGGCAACCTTGCGCTGGTTCCAAATGAGAATAGACATGATATTTGTCCTCTTCTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTGGGAGTCTTAAAGATCTGTaGCTTTCTGGGAACATAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TNTTFLHFRSLKDLLLSGSLKDL*LSGNIS Trigger: ACTTATGTTCCCAGAAAGCAACAGATCTTTAAGACT...CCCAGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR TCA 72 bp | TGGAAAGTCAGTTACCCATACCCATATGAACGTTTTTaGACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: WKVSYPYPYERF*TLFQNSLLKSK Trigger: CTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTTCAAAAACGTTCATATGGGTATGGGTAACTGACTTTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATCAAGGAAATTATCCAGGCCACTTTATGGGACTGAAACAGTTCTTTTCCTAAGGTCTCAGTTAGAATaGAACTTCTTCTTTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ISRKLSRPLYGTETVLFLRSQLE*NFFFPQ Trigger: CTGAGGAAAGAAGAAGTTCAATTCTAACTGAGACCT...TAGGAAAAGAACTGTTTCAGTCCCATAAAGTGGCCTGGATAATTTCCTTGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR TCA 72 bp | AGTGGTCATTATCAACTATCTGAAGTTCAAACAATTTaGCTACTGCTGGAAAGTCAGTTACCCATACCCATA | + |
|
Preference number: 3 (lower is better) Translates to: SGHYQLSEVQTI*LLLESQLPIPI Trigger: TATGGGTATGGGTAACTGACTTTCCAGCAGTAGTCAAATTGTTTGAACTTCAGATAGTTGATAATGACCACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR TCA 72 bp | TTCAGTTCTTCAATAATGCAAATTAACCAGCTGTACTaGACAATAAGCCGAATGACTAACCTGGTTGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: FSSSIMQINQLY*TISRMTNLVGI Trigger: AATGCCAACCAGGTTAGTCATTCGGCTTATTGTTCAGTACAGCTGGTTAATTTGCATTATTGAAGAACTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR GCA 72 bp | TCATCAGACTCTCCATCGATACATAATGGAGTCTTTTaGACAATGGAAATTTTCCTTACAGAGCTGAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSDSPSIHNGVF*TMEIFLTELNE Trigger: TTCATTCAGCTCTGTAAGGAAAATTTCCATTGTGCAAAAGACTCCATTATGTATCGATGGAGAGTCTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CCA 72 bp | ATCAACTATCTGAAGTTCAAACAATTTGACTACTGCTaGAAAGTCAGTTACCCATACCCATATGAACGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: INYLKFKQFDYC*KVSYPYPYERF Trigger: AAAACGTTCATATGGGTATGGGTAACTGACTTTCCAGCAGTAGTCAAATTGTTTGAACTTCAGATAGTTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCCACCTGTCTCTTGTGCTTGCTGGAGTaGCGGCCCTGGAAGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLCGLGSLATEPQGSTCLLCLLE*RPWKNL Trigger: GAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAA...GAGACAGGTGGATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR GCA 90 bp | AGCCTGGAACTCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCACGGCAGTGGGGAACTaGCGTGTGACTGACATACGT | + |
|
Preference number: 4 (lower is better) Translates to: SLELSLWARITCHRAPGITAVGN*RVTDIR Trigger: ACGTATGTCAGTCACACGGCAGTTCCCCACTGCCGT...GATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGAGTTCCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 72 bp | GTCTCCTCTTTCAGAGCAGTAATTTGCGTCCGAGGCTaGTGCTTGCTGGAGTGGCGGCCCTGGAAGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSFRAVICVRG*CLLEWRPWKNL Trigger: GAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATTACTGCTCTGAAAGAGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGAACTCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCGTTATGGGGTCTAGATaGGCACTGGGCTCATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLELSLWARITCHRAPGIVMGSR*ALGSSS Trigger: GCTTGATGAGCCCAGTGCCCATCTAGACCCCATAAC...GATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGAGTTCCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| 3UTR CAA 72 bp | CCCACCTCTCCAGTCTGTCTAAACGACTGTTTGGGTTaGCTCCACGGGGCAGAGGAATCGTCTACTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PTSPVCLNDCLG*LHGAEESSTEN Trigger: GTTCTCAGTAGACGATTCCTCTGCCCCGTGGAGCAAACCCAAACAGTCGTTTAGACAGACTGGAGAGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 72 bp | CTGCATGGGTTCTGGGAATGGACTCAGTGCACTGAGTaGCTTCCTCAGCATCCCAGCACTAGAGACGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHGFWEWTQCTE*LPQHPSTRDGF Trigger: AAACCCGTCTCTAGTGCTGGGATGCTGAGGAAGCAACTCAGTGCACTGAGTCCATTCCCAGAACCCATGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 72 bp | TCTTTCAGAGCAGTAATTTGCGTCCGAGGCTTGTGCTaGCTGGAGTGGCGGCCCTGGAAGAACCTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFRAVICVRGLC*LEWRPWKNLIF Trigger: AAAGATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATTACTGCTCTGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | AATTTGCGTCCGAGGCTTGTGCTTGCTGGAGTGGCGGCCCTGGAAGAACCTCATGACTACAAAGAACCCTaGAAAGAAGAAGGCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLRPRLVLAGVAALEEPHDYKEP*KEEGRA Trigger: AGCTCTGCCTTCTTCTTTTCAGGGTTCTTTGTAGTC...ATGAGGTTCTTCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCAAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | CAGCGGCAAACCTCTGAAGAGGCTCAGGGCAAGCAAAGTGTCAGCCACTCCCACCTTAATAATTCCCTCTaGAGCTTCCAGTTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QRQTSEEAQGKQSVSHSHLNNSL*SFQFSQ Trigger: TTGGGAGAACTGGAAGCTTCAGAGGGAATTATTAAG...GTGGGAGTGGCTGACACTTTGCTTGCCCTGAGCCTCTTCAGAGGTTTGCCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGAGTATATCCACAGGTATTGTCCCTCAGGTGCCCAGCCTGGAACTCTCACGACTGTTTGGGTTTaGTCCACGGGGCAGAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KQEYIHRYCPSGAQPGTLTTVWV*STGQRN Trigger: ATTCCTCTGCCCCGTGGAGCAAACCCAAACAGTCGT...GAGAGTTCCAGGCTGGGCACCTGAGGGACAATACCTGTGGATATACTCTTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR GCA 90 bp | TGTGCCCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCATGGTCCTCTGAAGATTaGTGGAGCCTGAGTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CAHQGAVLTFGTIFFKAAWSSED*WSLSWV Trigger: CACCCAACTCAGGCTCCAGCAATCTTCAGAGGACCA...TGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR GCA 90 bp | TTGAACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAGTCGCAGGCTTCACCCTTTCCGAGGCTTGTGCTTaGTGGAGTGGCGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNSLPKQSLKEQVAGFTLSEACA*WSGGPG Trigger: TCCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGA...AAGGGTGAAGCCTGCGACTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCCACCTGTCTCAAGGCCAAAAATAGCTaGGTGAAGAAGCAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLCGLGSLATEPQGSTCLKAKNS*VKKQCP Trigger: AGGACACTGCTTCTTCACCCAGCTATTTTTGGCCTT...GAGACAGGTGGATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTGGAACTCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCCATTTTCTCCATCGCTaGTTCCCAACAATATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLELSLWARITCHRAPGIHFLHR*FPTICL Trigger: AAGGCATATTGTTGGGAATCAGCGATGGAGAAAATG...GATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGAGTTCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTGGAACTCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCCTTAATAATTCCCTCTaGAGCTTCCAGTTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLELSLWARITCHRAPGILNNSL*SFQFSQ Trigger: TTGGGAGAACTGGAAGCTTCAGAGGGAATTATTAAG...GATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGAGTTCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | GACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGGGCATCACGGCAGTGGGGAACTaGCGTGTGACTGACATACGT | + |
|
Preference number: 4 (lower is better) Translates to: DLDILNPDGLLDHQMSGITAVGN*RVTDIR Trigger: ACGTATGTCAGTCACACGGCAGTTCCCCACTGCCGT...GATGCCCGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCTGCGTCCGAGGCTTGTaGTTGCTGGAGTGGCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KREHVLSENHTDGYKIYICVRGL*LLEWRP Trigger: GGGCCGCCACTCCAGCAAGCACAAGCCTCGGACGCA...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| 3UTR CAA 72 bp | TTTTCTCCCACCTCTCCAGTCTGTCTAAACGACTGTTaGGGTTTGCTCCACGGGGCAGAGGAATCGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: FSPTSPVCLNDC*GLLHGAEESST Trigger: AGTAGACGATTCCTCTGCCCCGTGGAGCAAACCCAAACAGTCGTTTAGACAGACTGGAGAGGTGGGAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 72 bp | TCTAGATGGGCACTGGGCTCATCAAGCAGTATGATCTaGGCCTTACTGAGAACTGATCGGGCCAAGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: SRWALGSSSSMI*ALLRTDRAKHI Trigger: AATGTGCTTGGCCCGATCAGTTCTCAGTAAGGCCAAGATCATACTGCTTGATGAGCCCAGTGCCCATCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCAATCTTTGCAGCTCTCTaGTCTCTGTACTTCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: CAHQGAVLTFGTIFFKAAIFAAL*SLYFTI Trigger: GATGGTGAAGTACAGAGATCAGAGAGCTGCAAAGAT...TGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | CGTAGGTATGTGTTCCATGTTGTCACCGGGGGTATCTTGATCACATCATCAAGAGACCTCCACTCAGTGTaGCTCCACCTTCTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRYVFHVVTGGILITSSRDLHSV*LHLLQE Trigger: TTCTTGGAGAAGGTGGAGTCACACTGAGTGGAGGTC...TCTTGATGATGTGATCAAGATACCCCCGGTGACAACATGGAACACATACCTACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGCCCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCCAGATTCCAGTTGTTTaGGCTGCTGTGCTGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: MCPSGGRLNLWYHLLQSCQIPVV*AAVLYE Trigger: TTCATACAGCACAGCAGCTCAAACAACTGGAATCTG...GCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR TCA 90 bp | TGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACTCACTCAGAAGTGCCTaGAGGGAGTCGTACTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCLRTTQMGTRFTSARLHSLRSA*RESYCQ Trigger: CTGGCAGTACGACTCCCTTCAGGCACTTCTGAGTGA...GTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR GCA 90 bp | AGCCTGGAACTCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCGTTTTCTGTCACCATTaGTTTGTTGTACTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLELSLWARITCHRAPGIVFCHH*FVVLSP Trigger: TGGAGAAAGTACAACAAAGCAATGGTGACAGAAAAC...GATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGAGTTCCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGCCCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCATGTCTATTCTCATTTaGAACCAGCGCAAGGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MCPSGGRLNLWYHLLQSCMSILI*NQRKVA Trigger: GGCAACCTTGCGCTGGTTCCAAATGAGAATAGACAT...GCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| 3UTR CAA 72 bp | GTGGGTGAAAATTGGACTCCTGCCTTCAGATTCCAGTaGTTTGAGCTGCTGTGCTGTATGAAGGAAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGENWTPAFRFQ*FELLCCMKEVG Trigger: GCCTACTTCCTTCATACAGCACAGCAGCTCAAACAACTGGAATCTGAAGGCAGGAGTCCAATTTTCACCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAAGTACTTTTTCCTGATCCAGTTCTTCCTAAGAGCCCCACCCTCTGTCCACCCACAAGGCAGAGATaGCTGAAACTGACATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKVLFPDPVLPKSPTLCPPTRQR*LKLTLF Trigger: GAACAATGTCAGTTTCAGTCATCTCTGCCTTGTGGG...TGGACAGAGGGTGGGGCTCTTAGGAAGAACTGGATCAGGAAAAAGTACTTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | CCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCATTAAAGTTCTGCAAACTTGGTaGTGTCCTGCTGTAGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSGGRLNLWYHLLQSCIKVLQTW*CPAVVG Trigger: GCCAACTACAGCAGGACATCACCAAGTTTGCAGAAC...TTTAATGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGGACCTCCACTCAGTGTaGCTCCACCTTCTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FQDLDILNPDGLLDHQMSDLHSV*LHLLQE Trigger: TTCTTGGAGAAGGTGGAGTCACACTGAGTGGAGGTC...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAGTCTGGCGTCGGAAGGCTCGAAGTGTCCAGAGTCCTTTTAAGCTTGTCAGAAGGCATAAGCCTATaGCAAGGTAAATGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SKSGVGRLEVSRVLLSLSEGISL*QGKWQW Trigger: CCATTGCCATTTACCTTGGCATAGGCTTATGCCTTC...TGACAAGCTTAAAAGGACTCTGGACACTTCGAGCCTTCCGACGCCAGACTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCCTGTCTTCTTCTGCCTaGAAATGTGGGGCCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KREHVLSENHTDGYKIYILSSSA*KCGAGG Trigger: GCCACCGGCCCCACATTTCCAGGCAGAAGAAGACAG...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR CCA 90 bp | GACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGGGCATCGAGCTAATGGCCTGCTaGAAGATACTCTTCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: DLDILNPDGLLDHQMSGIELMAC*KILFSL Trigger: GAGTGAGAAGAGTATCTTCCAGCAGGCCATTAGCTC...GATGCCCGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR TCA 90 bp | ATTATTTCCAGTTGGGGGTACACTGGGGTAGGACAGTGTTTACAACTTGGAGCTCCAAAAATAGCTGGGTaGAGAAGCAGTGTCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: IISSWGYTGVGQCLQLGAPKIAG*RSSVLT Trigger: TGTCAGGACACTGCTTCTTCACCCAGCTATTTTTGG...AGCTCCAAGTTGTAAACACTGTCCTACCCCAGTGTACCCCCAACTGGAAATAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTCATTCTGCATGGGTTCTGGGAATGGACTCAGTGCACTGAGTTGCTTCCTTGCATTCCAATGCGATaGAGGCCAAAAATAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FFILHGFWEWTQCTELLPCIPMR*RPKIAG Trigger: CCCAGCTATTTTTGGCCTTCATCGCATTGGAATGCA...AGGAAGCAACTCAGTGCACTGAGTCCATTCCCAGAACCCATGCAGAATGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | TTGAACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAGTCGCAGGCTTCACCCTTAAGATTGCTGGAGCCTaGGTTGGGTGTGAACGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNSLPKQSLKEQVAGFTLKIAGA*VGCERH Trigger: ATGACGTTCACACCCAACTCAGGCTCCAGCAATCTT...AAGGGTGAAGCCTGCGACTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR CCA 90 bp | TGTGCCCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCACAAGGTAAATGGCAATaGAACGTTCCACCTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CAHQGAVLTFGTIFFKAAQGKWQ*NVPPCF Trigger: AAAACAAGGTGGAACGTTCCATTGCCATTTACCTTG...TGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 72 bp | TGGAACCAGCGCAAGGTTGCCAGATACATAAACCAGTaGGCAGTGTGCAAATTCAGAGCTTTGTGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WNQRKVARYINQ*AVCKFRALWNR Trigger: TCTGTTCCACAAAGCTCTGAATTTGCACACTGCCAACTGGTTTATGTATCTGGCAACCTTGCGCTGGTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACCCCACAAGGCAGAGATaGCTGAAACTGACATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCLRTTQMGTRFTSARLHPTRQR*LKLTLF Trigger: GAACAATGTCAGTTTCAGTCATCTCTGCCTTGTGGG...GTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTCAGTAAACTGGTCAAAAGTATCATACCCCATGAGTTTCGAACTGAAGTCGAAATCCTTGCACGCTaGCCTCCACTCAGTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: FLSKLVKSIIPHEFRTEVEILAR*PPLSVT Trigger: AGTCACACTGAGTGGAGGTCAGCGTGCAAGGATTTC...GACTTCAGTTCGAAACTCATGGGGTATGATACTTTTGACCAGTTTACTGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGTTGTCACAAGGTGGGTaGAAATTGGACTCCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQDLDILNPDGLLDHQMSLSQGG*KLDSCL Trigger: AAGGCAGGAGTCCAATTTTCACCCACCTTGTGACAA...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR TCA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCTGTGTTCACAGAGGATaGCTGTGCAACCAGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KREHVLSENHTDGYKIYICVHRG*LCNQRR Trigger: CCTTCGCTGGTTGCACAGTCATCCTCTGTGAACACA...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGAGTATATCCACAGGTATTGTCCCTCAGGTGCCCAGCCTGGAACTCTCTCTTTCATTGATCTTTaGAGCTCTCTGATCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KQEYIHRYCPSGAQPGTLSFIDL*SSLISV Trigger: TACAGAGATCAGAGAGCTGCAAAGATCAATGAAAGA...GAGAGTTCCAGGCTGGGCACCTGAGGGACAATACCTGTGGATATACTCTTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTTGCCCAGAAAAACTCTTCTAAAAACAGATCTGGTAACAAGCCCAGAACAACGGCAGTGGGGAACTaGCGTGTGACTGACATACGT | + |
|
Preference number: 4 (lower is better) Translates to: ILAQKNSSKNRSGNKPRTTAVGN*RVTDIR Trigger: ACGTATGTCAGTCACACGGCAGTTCCCCACTGCCGT...TGTTCTGGGCTTGTTACCAGATCTGTTTTTAGAAGAGTTTTTCTGGGCAAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATACGGCAGTGGGGAACTaGCGTGTGACTGACATACGT | + |
|
Preference number: 4 (lower is better) Translates to: TQMGTRFTSARLHNMKLNTAVGN*RVTDIR Trigger: ACGTATGTCAGTCACACGGCAGTTCCCCACTGCCGT...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGCCCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCGAAACTCTTCCACTGTaGTTAATAATTCCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MCPSGGRLNLWYHLLQSCETLPL*LIIPSE Trigger: TTCAGAGGGAATTATTAAGCACAGTGGAAGAGTTTC...GCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGTCAGCAGAAGGGGCTTaGTATATGTCTGACAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQDLDILNPDGLLDHQMSSAEGA*YMSDNS Trigger: GGAGTTGTCAGACATATACCAAGCCCCTTCTGCTGA...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTCATTCTGCATGGGTTCTGGGAATGGACTCAGTGCACTGAGTTGCTTCCTAAGGCCAAAAATAGCTaGGTGAAGAAGCAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFILHGFWEWTQCTELLPKAKNS*VKKQCP Trigger: AGGACACTGCTTCTTCACCCAGCTATTTTTGGCCTT...AGGAAGCAACTCAGTGCACTGAGTCCATTCCCAGAACCCATGCAGAATGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAAGAGTATATCCACAGGTATTGTCCCTCAGGTGCCCAGCCTGGAACTCTCCATTGTTCTCATCACTaGAATGTTTTCTGTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQEYIHRYCPSGAQPGTLHCSHH*NVFCHH Trigger: ATGGTGACAGAAAACATTCCAGTGATGAGAACAATG...GAGAGTTCCAGGCTGGGCACCTGAGGGACAATACCTGTGGATATACTCTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | GACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGTTCACAGAGGATATGTCCTGCTGTAGTTaGCAAGCTTTGACAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: DQKSLAIQHRFYPVFTEDMSCCS*QALTTL Trigger: GAGTGTTGTCAAAGCTTGCCAACTACAGCAGGACAT...ATCCTCTGTGAACACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | TGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTTTCTGCCTGGAAATGTaGGGCCGGTGGCGATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: CTNTTFLHFRSLKDLLLSFCLEM*GRWRSC Trigger: ACATGATCGCCACCGGCCCCACATTTCCAGGCAGAA...AGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR CCA 90 bp | CCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCATTAAAAAGCTTGTCACAAGGTaGGTGAAAATTGGACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSGGRLNLWYHLLQSCIKKLVTR*VKIGLL Trigger: CAGGAGTCCAATTTTCACCCACCTTGTGACAAGCTT...TTTAATGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR CCA 90 bp | ATAAGTGTGTCGATTTCCATATCAAGGAAATTATCCAGGCCACTTTATGGGACTCTGGAGTGGCGGCCCTaGAAGAACCTCATCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISVSISISRKLSRPLYGTLEWRP*KNLIFS Trigger: GGAAAAGATGAGGTTCTTCCAGGGCCGCCACTCCAG...AGTCCCATAAAGTGGCCTGGATAATTTCCTTGATATGGAAATCGACACACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR CCA 90 bp | CTACAATGGGCTCATGTGTTTGAAAACATTATTTCCAGTTGGGGGTACACTGGGCATCCCTGCTGTAGTTaGCAAGCTTTGACAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: LQWAHVFENIISSWGYTGHPCCS*QALTTL Trigger: GAGTGTTGTCAAAGCTTGCCAACTACAGCAGGGATG...CCCAGTGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACATCTTTGCAGCTCTCTaGTCTCTGTACTTCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: CCLRTTQMGTRFTSARLHIFAAL*SLYFTI Trigger: GATGGTGAAGTACAGAGATCAGAGAGCTGCAAAGAT...GTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | CTACAATGGGCTCATGTGTTTGAAAACATTATTTCCAGTTGGGGGTACACTGGGATCTTTGCAGCTCTCTaGTCTCTGTACTTCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: LQWAHVFENIISSWGYTGIFAAL*SLYFTI Trigger: GATGGTGAAGTACAGAGATCAGAGAGCTGCAAAGAT...CCCAGTGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR TCA 90 bp | AATCTAAATCTAGCAAGAAAGTACCACCCTATCTCACCCCCACCACCCCCAAAACATTTTCTCCATCGCTaGTTCCCAACAATATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLNLARKYHPISPPPPPKHFLHR*FPTICL Trigger: AAGGCATATTGTTGGGAATCAGCGATGGAGAAAATG...TTTTGGGGGTGGTGGGGGTGAGATAGGGTGGTACTTTCTTGCTAGATTTAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTCTTCTATGACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGCATTTTCTCCATCGCTaGTTCCCAACAATATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALFYDQKSLAIQHRFYPVHFLHR*FPTICL Trigger: AAGGCATATTGTTGGGAATCAGCGATGGAGAAAATG...CACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTCATAGAAGAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | GCACTAGTTTGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGGTTCTGCAAACTTGGTaGTGTCCTGCTGTAGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALVCTNTTFLHFRSLKDLVLQTW*CPAVVG Trigger: GCCAACTACAGCAGGACATCACCAAGTTTGCAGAAC...CAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCAAACTAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | AATTTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGGTTCTGCAAACTTGGTaGTGTCCTGCTGTAGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NFQDLDILNPDGLLDHQMVLQTW*CPAVVG Trigger: GCCAACTACAGCAGGACATCACCAAGTTTGCAGAAC...CATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | ATAAGTGTGTCGATTTCCATATCAAGGAAATTATCCAGGCCACTTTATGGGACTGAAATCCTTGCACGCTaGCCTCCACTCAGTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ISVSISISRKLSRPLYGTEILAR*PPLSVT Trigger: AGTCACACTGAGTGGAGGTCAGCGTGCAAGGATTTC...AGTCCCATAAAGTGGCCTGGATAATTTCCTTGATATGGAAATCGACACACTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | ATGACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGTTCACAGAGGTGTGTTGTCTTGTTCTaGAAACTTGGTGATGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MTKNRWQSNIASILCSQRCVVLF*KLGDVL Trigger: CAGGACATCACCAAGTTTGCAGAACAAGACAACACA...CCTCTGTGAACACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAGTCGCAGGCTTCACCCTTAAGGCCAAAAATAGCTaGGTGAAGAAGCAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LNSLPKQSLKEQVAGFTLKAKNS*VKKQCP Trigger: AGGACACTGCTTCTTCACCCAGCTATTTTTGGCCTT...AAGGGTGAAGCCTGCGACTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | CTACAATGGGCTCATGTGTTTGAAAACATTATTTCCAGTTGGGGGTACACTGGGAAGGCCAAAAATAGCTaGGTGAAGAAGCAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQWAHVFENIISSWGYTGKAKNS*VKKQCP Trigger: AGGACACTGCTTCTTCACCCAGCTATTTTTGGCCTT...CCCAGTGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGATGTCCTGCTGTAGTTaGCAAGCTTTGACAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: FQDLDILNPDGLLDHQMSMSCCS*QALTTL Trigger: GAGTGTTGTCAAAGCTTGCCAACTACAGCAGGACAT...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 72 bp | GCATTTCCATCATCCATGTATTTCACAGTAAGGTCTTaGACAACCATTTCGCCTCCAGAGGGCCAGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: AFPSSMYFTVRS*TTISPPEGQIS Trigger: TGATATCTGGCCCTCTGGAGGCGAAATGGTTGTCAAAGACCTTACTGTGAAATACATGGATGATGGAAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACTCACGAGTCTTTCATTaGTCTTTGCAGCTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CCLRTTQMGTRFTSARLHSRVFH*SLQLSD Trigger: ATCAGAGAGCTGCAAAGATCAATGAAAGACTCGTGA...GTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | CTACAATGGGCTCATGTGTTTGAAAACATTATTTCCAGTTGGGGGTACACTGGGTCACGAGTCTTTCATTaGTCTTTGCAGCTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQWAHVFENIISSWGYTGSRVFH*SLQLSD Trigger: ATCAGAGAGCTGCAAAGATCAATGAAAGACTCGTGA...CCCAGTGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAGTGTGCAAATTCAGAGCTTTGTGGAACAGAGTTTCAAAGTAAGTCTGGCTCACGAGTCTTTCATTaGTCTTTGCAGCTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WQCANSELCGTEFQSKSGSRVFH*SLQLSD Trigger: ATCAGAGAGCTGCAAAGATCAATGAAAGACTCGTGA...GCCAGACTTACTTTGAAACTCTGTTCCACAAAGCTCTGAATTTGCACACTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACCATTTTCTCCATCGCTaGTTCCCAACAATATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCLRTTQMGTRFTSARLHHFLHR*FPTICL Trigger: AAGGCATATTGTTGGGAATCAGCGATGGAGAAAATG...GTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTCAGTAAACTGGTCAAAAGTATCATACCCCATGAGTTTCGAACTGAAGTCCCCACAAGGCAGAGATaGCTGAAACTGACATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSKLVKSIIPHEFRTEVPTRQR*LKLTLF Trigger: GAACAATGTCAGTTTCAGTCATCTCTGCCTTGTGGG...GACTTCAGTTCGAAACTCATGGGGTATGATACTTTTGACCAGTTTACTGAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGCTTAATAATTCCCTCTaGAGCTTCCAGTTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQDLDILNPDGLLDHQMSLNNSL*SFQFSQ Trigger: TTGGGAGAACTGGAAGCTTCAGAGGGAATTATTAAG...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTCATTCTGCATGGGTTCTGGGAATGGACTCAGTGCACTGAGTTGCTTCCTAAATTGAGAGCAGAATaGAACTCTTCCACTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFILHGFWEWTQCTELLPKLRAE*NSSTVL Trigger: AAGCACAGTGGAAGAGTTTCATTCTGCTCTCAATTT...AGGAAGCAACTCAGTGCACTGAGTCCATTCCCAGAACCCATGCAGAATGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | GACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGTTCACAGAGGATAAATTGAGAGCAGAATaGAACTCTTCCACTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DQKSLAIQHRFYPVFTEDKLRAE*NSSTVL Trigger: AAGCACAGTGGAAGAGTTTCATTCTGCTCTCAATTT...ATCCTCTGTGAACACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | ATATCAAGGAAATTATCCAGGCCACTTTATGGGACTGAAACAGTTCTTTTCCTAGAAATCCTTGCACGCTaGCCTCCACTCAGTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ISRKLSRPLYGTETVLFLEILAR*PPLSVT Trigger: AGTCACACTGAGTGGAGGTCAGCGTGCAAGGATTTC...TAGGAAAAGAACTGTTTCAGTCCCATAAAGTGGCCTGGATAATTTCCTTGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | GCACTAGTTTGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGAGCCTGAGTTGGGTGTaGACGTCATCAGATCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALVCTNTTFLHFRSLKDLSLSWV*TSSDPK Trigger: TTTTGGATCTGATGACGTTCACACCCAACTCAGGCT...CAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCAAACTAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR TCA 90 bp | AACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAGTCGCAGGCTTCACCCTTCTTCATTGCTCTCTTCTATaGCCAAAAATCGCTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NSLPKQSLKEQVAGFTLLHCSLL*PKIAGN Trigger: ATTGCCAGCGATTTTTGGTCATAGAAGAGAGCAATG...AAGAAGGGTGAAGCCTGCGACTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR GCA 90 bp | GTCACAAGGTGGGTGAAAATTGGACTCCTGCCTTCAGATTCCAGTTGTTTGAGCTCTTTCATTGATCTTTaGAGCTCTCTGATCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VTRWVKIGLLPSDSSCLSSFIDL*SSLISV Trigger: TACAGAGATCAGAGAGCTGCAAAGATCAATGAAAGA...GCTCAAACAACTGGAATCTGAAGGCAGGAGTCCAATTTTCACCCACCTTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGTGTGCAAATTCAGAGCTTTGTGGAACAGAGTTTCAAAGTAAGTCTGGCTGTGTTGTCTTGTTCTaGAAACTTGGTGATGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WQCANSELCGTEFQSKSGCVVLF*KLGDVL Trigger: CAGGACATCACCAAGTTTGCAGAACAAGACAACACA...GCCAGACTTACTTTGAAACTCTGTTCCACAAAGCTCTGAATTTGCACACTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | ACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTGGGTCAGCAGAAGGGGCTTaGTATATGTCTGACAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNTTFLHFRSLKDLLLSGSAEGA*YMSDNS Trigger: GGAGTTGTCAGACATATACCAAGCCCCTTCTGCTGA...CCCAGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | ATGACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGTTCACAGAGGCAAGGTAAATGGCAATaGAACGTTCCACCTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MTKNRWQSNIASILCSQRQGKWQ*NVPPCF Trigger: AAAACAAGGTGGAACGTTCCATTGCCATTTACCTTG...CCTCTGTGAACACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | ATAAGTGTGTCGATTTCCATATCAAGGAAATTATCCAGGCCACTTTATGGGACTCCAAAAATAGCTGGGTaGAGAAGCAGTGTCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ISVSISISRKLSRPLYGTPKIAG*RSSVLT Trigger: TGTCAGGACACTGCTTCTTCACCCAGCTATTTTTGG...AGTCCCATAAAGTGGCCTGGATAATTTCCTTGATATGGAAATCGACACACTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | AATTTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGGACTACAAAGAACCCTaGAAAGAAGAAGGCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NFQDLDILNPDGLLDHQMDYKEP*KEEGRA Trigger: AGCTCTGCCTTCTTCTTTTCAGGGTTCTTTGTAGTC...CATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | GCACTAGTTTGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGGACTACAAAGAACCCTaGAAAGAAGAAGGCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALVCTNTTFLHFRSLKDLDYKEP*KEEGRA Trigger: AGCTCTGCCTTCTTCTTTTCAGGGTTCTTTGTAGTC...CAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCAAACTAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCAAGTAAGACTTATTACTCCCTCCAATTCTTGCCCAGAAAAACTCTTCTACCCACAAGGCAGAGATaGCTGAAACTGACATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPSKTYYSLQFLPRKTLLPTRQR*LKLTLF Trigger: GAACAATGTCAGTTTCAGTCATCTCTGCCTTGTGGG...TAGAAGAGTTTTTCTGGGCAAGAATTGGAGGGAGTAATAAGTCTTACTTGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGAAATTGAGAGCAGAATaGAACTCTTCCACTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQDLDILNPDGLLDHQMSKLRAE*NSSTVL Trigger: AAGCACAGTGGAAGAGTTTCATTCTGCTCTCAATTT...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | GCAATACATATCTTAGAGGAAAGTAAGTTGGGCTTTGAGTTATATAAGACACTGGACCTCCACTCAGTGTaGCTCCACCTTCTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AIHILEESKLGFELYKTLDLHSV*LHLLQE Trigger: TTCTTGGAGAAGGTGGAGTCACACTGAGTGGAGGTC...CAGTGTCTTATATAACTCAAAGCCCAACTTACTTTCCTCTAAGATATGTATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | GCAATACATATCTTAGAGGAAAGTAAGTTGGGCTTTGAGTTATATAAGACACTGGAAGTTCTGGTCCTCTaGAGATTGCTGGAGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AIHILEESKLGFELYKTLEVLVL*RLLEPE Trigger: CTCAGGCTCCAGCAATCTTCAGAGGACCAGAACTTC...CAGTGTCTTATATAACTCAAAGCCCAACTTACTTTCCTCTAAGATATGTATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR GCA 90 bp | AATCTAAATCTAGCAAGAAAGTACCACCCTATCTCACCCCCACCACCCCCAAAATCTTTCATTGATCTTTaGAGCTCTCTGATCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NLNLARKYHPISPPPPPKSFIDL*SSLISV Trigger: TACAGAGATCAGAGAGCTGCAAAGATCAATGAAAGA...TTTTGGGGGTGGTGGGGGTGAGATAGGGTGGTACTTTCTTGCTAGATTTAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTCATTCTGCATGGGTTCTGGGAATGGACTCAGTGCACTGAGTTGCTTCCTGAAACTCTTCCACTGTaGTTAATAATTCCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FFILHGFWEWTQCTELLPETLPL*LIIPSE Trigger: TTCAGAGGGAATTATTAAGCACAGTGGAAGAGTTTC...AGGAAGCAACTCAGTGCACTGAGTCCATTCCCAGAACCCATGCAGAATGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCAAGTAAGACTTATTACTCCCTCCAATTCTTGCCCAGAAAAACTCTTCTATCAGCAGAAGGGGCTTaGTATATGTCTGACAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPSKTYYSLQFLPRKTLLSAEGA*YMSDNS Trigger: GGAGTTGTCAGACATATACCAAGCCCCTTCTGCTGA...TAGAAGAGTTTTTCTGGGCAAGAATTGGAGGGAGTAATAAGTCTTACTTGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATTCAGCAGAAGGGGCTTaGTATATGTCTGACAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQMGTRFTSARLHNMKLNSAEGA*YMSDNS Trigger: GGAGTTGTCAGACATATACCAAGCCCCTTCTGCTGA...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAGTTTTTCAGACAAGTaGTCAGCTGAATCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CCLRTTQMGTRFTSARLHSFSDK*SAESAE Trigger: TTCTGCTGATTCAGCTGACCACTTGTCTGAAAAACT...GTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAGTCGCAGGCTTCACCCTTCTTTCCTCAGTAAACTaGTCAAAAGTATCATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LNSLPKQSLKEQVAGFTLLSSVN*SKVSYP Trigger: GGGGTATGATACTTTTGACCAGTTTACTGAGGAAAG...AAGGGTGAAGCCTGCGACTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| 3UTR CAA 72 bp | CGTAGGTATGTGTTCCATGTTGTCACCGGGGGTATCTaGATCACATCATCAAGAAAACACTCCTTTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: RRYVFHVVTGGI*ITSSRKHSFKS Trigger: AGATTTAAAGGAGTGTTTTCTTGATGATGTGATCAAGATACCCCCGGTGACAACATGGAACACATACCTACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 72 bp | TTCTTCCTAAGAGCCCCACCCTCTGTCCAGGACTTATaGAAAAAGAAATGTTCTCTAATACGGCATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFLRAPPSVQDL*KKKCSLIRHFH Trigger: ATGGAAATGCCGTATTAGAGAACATTTCTTTTTCAATAAGTCCTGGACAGAGGGTGGGGCTCTTAGGAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | CTACAATGGGCTCATGTGTTTGAAAACATTATTTCCAGTTGGGGGTACACTGGGTTCCCTAGGATAGCTTaGAAAATAACCAGGATTATC | + |
|
Preference number: 4 (lower is better) Translates to: LQWAHVFENIISSWGYTGFPRIA*KITRII Trigger: GATAATCCTGGTTATTTTTCAAGCTATCCTAGGGAA...CCCAGTGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCAAGTAAGACTTATTACTCCCTCCAATTCTTGCCCAGAAAAACTCTTCTAGACTACAAAGAACCCTaGAAAGAAGAAGGCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPSKTYYSLQFLPRKTLLDYKEP*KEEGRA Trigger: AGCTCTGCCTTCTTCTTTTCAGGGTTCTTTGTAGTC...TAGAAGAGTTTTTCTGGGCAAGAATTGGAGGGAGTAATAAGTCTTACTTGGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTTGCCCAGAAAAACTCTTCTAAAAACAGATCTGGTAACAAGCCCAGAACAGAAGGCATAAGCCTATaGCAAGGTAAATGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: ILAQKNSSKNRSGNKPRTEGISL*QGKWQW Trigger: CCATTGCCATTTACCTTGGCATAGGCTTATGCCTTC...TGTTCTGGGCTTGTTACCAGATCTGTTTTTAGAAGAGTTTTTCTGGGCAAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR GCA 90 bp | AACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAGTCGCAGGCTTCACCCTTCTTTCTTTCATTGATCTTTaGAGCTCTCTGATCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NSLPKQSLKEQVAGFTLLSFIDL*SSLISV Trigger: TACAGAGATCAGAGAGCTGCAAAGATCAATGAAAGA...AAGAAGGGTGAAGCCTGCGACTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | ACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTGGGTGTGTTGTCTTGTTCTaGAAACTTGGTGATGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TNTTFLHFRSLKDLLLSGCVVLF*KLGDVL Trigger: CAGGACATCACCAAGTTTGCAGAACAAGACAACACA...CCCAGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | GCACTAGTTTGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGGAGTTCACAGCCCACTaGAAAGTACTCATGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: ALVCTNTTFLHFRSLKDLEFTAH*KVLMIF Trigger: GAATATCATGAGTACTTTGCAGTGGGCTGTGAACTC...CAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCAAACTAGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR CCA 90 bp | AACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAGTCGCAGGCTTCACCCTTCTTCATTGTTCTCATCACTaGAATGTTTTCTGTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSLPKQSLKEQVAGFTLLHCSHH*NVFCHH Trigger: ATGGTGACAGAAAACATTCCAGTGATGAGAACAATG...AAGAAGGGTGAAGCCTGCGACTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACCATTGTTCTCATCACTaGAATGTTTTCTGTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CCLRTTQMGTRFTSARLHHCSHH*NVFCHH Trigger: ATGGTGACAGAAAACATTCCAGTGATGAGAACAATG...GTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | CTACAATGGGCTCATGTGTTTGAAAACATTATTTCCAGTTGGGGGTACACTGGGCATTGTTCTCATCACTaGAATGTTTTCTGTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQWAHVFENIISSWGYTGHCSHH*NVFCHH Trigger: ATGGTGACAGAAAACATTCCAGTGATGAGAACAATG...CCCAGTGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR CCA 90 bp | ACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTGGGACTCGTCGAATGACTTaGTATGTTATGGGGTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TNTTFLHFRSLKDLLLSGTRRMT*YVMGSR Trigger: TCTAGACCCCATAACATACCAAGTCATTCGACGAGT...CCCAGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR TCA 90 bp | GCAATACATATCTTAGAGGAAAGTAAGTTGGGCTTTGAGTTATATAAGACACTGCCAAAAATAGCTGGGTaGAGAAGCAGTGTCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: AIHILEESKLGFELYKTLPKIAG*RSSVLT Trigger: TGTCAGGACACTGCTTCTTCACCCAGCTATTTTTGG...CAGTGTCTTATATAACTCAAAGCCCAACTTACTTTCCTCTAAGATATGTATTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | GAATTCCATGAGACACCATCAATCTCTATATCACCTTTAATGTTCAACATTCGTCCAAAAATAGCTGGGTaGAGAAGCAGTGTCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: EFHETPSISISPLMFNIRPKIAG*RSSVLT Trigger: TGTCAGGACACTGCTTCTTCACCCAGCTATTTTTGG...ACGAATGTTGAACATTAAAGGTGATATAGAGATTGATGGTGTCTCATGGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | AAATATCGTAGGTATGTGTTCCATGTTGTCACCGGGGGTATCTTGATCACATCACTGTTACATTTTCCATaGTTATGCCTGTGGTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: KYRRYVFHVVTGGILITSLLHFP*LCLWSL Trigger: TAATGACCACAGGCATAATCATGGAAAATGTAACAG...TGATGTGATCAAGATACCCCCGGTGACAACATGGAACACATACCTACGATATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCAAGTAAGACTTATTACTCCCTCCAATTCTTGCCCAGAAAAACTCTTCTACTTAATAATTCCCTCTaGAGCTTCCAGTTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KPSKTYYSLQFLPRKTLLLNNSL*SFQFSQ Trigger: TTGGGAGAACTGGAAGCTTCAGAGGGAATTATTAAG...TAGAAGAGTTTTTCTGGGCAAGAATTGGAGGGAGTAATAAGTCTTACTTGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR GCA 90 bp | ATATCAAGGAAATTATCCAGGCCACTTTATGGGACTGAAACAGTTCTTTTCCTAGAAGGCATAAGCCTATaGCAAGGTAAATGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: ISRKLSRPLYGTETVLFLEGISL*QGKWQW Trigger: CCATTGCCATTTACCTTGGCATAGGCTTATGCCTTC...TAGGAAAAGAACTGTTTCAGTCCCATAAAGTGGCCTGGATAATTTCCTTGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTGGACGTAGACTTTGTAGCTCAGAAAATGTCCCATAAAAATAGCTACTGCCAAGGTAAATGGCAATaGAACGTTCCACCTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLDVDFVAQKMSHKNSYCQGKWQ*NVPPCF Trigger: AAAACAAGGTGGAACGTTCCATTGCCATTTACCTTG...GCAGTAGCTATTTTTATGGGACATTTTCTGAGCTACAAAGTCTACGTCCAGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCTTCCCTAGGATAGCTTaGAAAATAACCAGGATTATC | + |
|
Preference number: 4 (lower is better) Translates to: KREHVLSENHTDGYKIYIFPRIA*KITRII Trigger: GATAATCCTGGTTATTTTTCAAGCTATCCTAGGGAA...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | ATATCAAGGAAATTATCCAGGCCACTTTATGGGACTGAAACAGTTCTTTTCCTATCACGAGTCTTTCATTaGTCTTTGCAGCTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISRKLSRPLYGTETVLFLSRVFH*SLQLSD Trigger: ATCAGAGAGCTGCAAAGATCAATGAAAGACTCGTGA...TAGGAAAAGAACTGTTTCAGTCCCATAAAGTGGCCTGGATAATTTCCTTGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | GCACTAGTTTGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGCTGTTACATTTTCCATaGTTATGCCTGTGGTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: ALVCTNTTFLHFRSLKDLLLHFP*LCLWSL Trigger: TAATGACCACAGGCATAATCATGGAAAATGTAACAG...CAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCAAACTAGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTTGCCCAGAAAAACTCTTCTAAAAACAGATCTGGTAACAAGCCCAGAACAAAATTGAGAGCAGAATaGAACTCTTCCACTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILAQKNSSKNRSGNKPRTKLRAE*NSSTVL Trigger: AAGCACAGTGGAAGAGTTTCATTCTGCTCTCAATTT...TGTTCTGGGCTTGTTACCAGATCTGTTTTTAGAAGAGTTTTTCTGGGCAAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR GCA 90 bp | ACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTGGGAATCCATATAAAATGTaGCAAGGCAAGTCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TNTTFLHFRSLKDLLLSGNPYKM*QGKSFI Trigger: GATGAAGGACTTGCCTTGGCACATTTTATATGGATT...CCCAGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTTGCCCAGAAAAACTCTTCTAAAAACAGATCTGGTAACAAGCCCAGAACACAAGGTAAATGGCAATaGAACGTTCCACCTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILAQKNSSKNRSGNKPRTQGKWQ*NVPPCF Trigger: AAAACAAGGTGGAACGTTCCATTGCCATTTACCTTG...TGTTCTGGGCTTGTTACCAGATCTGTTTTTAGAAGAGTTTTTCTGGGCAAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR CCA 90 bp | GAATTCCATGAGACACCATCAATCTCTATATCACCTTTAATGTTCAACATTCGTATGTCCTGCTGTAGTTaGCAAGCTTTGACAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: EFHETPSISISPLMFNIRMSCCS*QALTTL Trigger: GAGTGTTGTCAAAGCTTGCCAACTACAGCAGGACAT...ACGAATGTTGAACATTAAAGGTGATATAGAGATTGATGGTGTCTCATGGAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 72 bp | ACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTaGCTTTCTGGGAACATAAGTGTGTCGATTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TTFLHFRSLKDL*LSGNISVSISI Trigger: TATGGAAATCGACACACTTATGTTCCCAGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 72 bp | AATGAAGAAGAGGACAAATATCATGTCTATTCTCATTaGGAACCAGCGCAAGGTTGCCAGATACATAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: NEEEDKYHVYSH*EPAQGCQIHKP Trigger: TGGTTTATGTATCTGGCAACCTTGCGCTGGTTCCAAATGAGAATAGACATGATATTTGTCCTCTTCTTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTTTCCTCAGTAAACTGGTCAAAAGTATCATACCCCATGAGTTTCGAACTTTCCCTAGGATAGCTTaGAAAATAACCAGGATTATC | + |
|
Preference number: 4 (lower is better) Translates to: SSFLSKLVKSIIPHEFRTFPRIA*KITRII Trigger: GATAATCCTGGTTATTTTTCAAGCTATCCTAGGGAA...AGTTCGAAACTCATGGGGTATGATACTTTTGACCAGTTTACTGAGGAAAGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCAAGTAAGACTTATTACTCCCTCCAATTCTTGCCCAGAAAAACTCTTCTACTGTTACATTTTCCATaGTTATGCCTGTGGTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: KPSKTYYSLQFLPRKTLLLLHFP*LCLWSL Trigger: TAATGACCACAGGCATAATCATGGAAAATGTAACAG...TAGAAGAGTTTTTCTGGGCAAGAATTGGAGGGAGTAATAAGTCTTACTTGGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR TCA 90 bp | TGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTCTGTTACATTTTCCATaGTTATGCCTGTGGTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: CTNTTFLHFRSLKDLLLSLLHFP*LCLWSL Trigger: TAATGACCACAGGCATAATCATGGAAAATGTAACAG...AGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATAATCCATATAAAATGTaGCAAGGCAAGTCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TQMGTRFTSARLHNMKLNNPYKM*QGKSFI Trigger: GATGAAGGACTTGCCTTGGCACATTTTATATGGATT...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | AATACCTACAATGGGCTCATGTGTTTGAAAACATTATTTCCAGTTGGGGGTACAGTTTTCTGTCACCATTaGTTTGTTGTACTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NTYNGLMCLKTLFPVGGTVFCHH*FVVLSP Trigger: TGGAGAAAGTACAACAAAGCAATGGTGACAGAAAAC...TGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAGGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR GCA 90 bp | AATACCTACAATGGGCTCATGTGTTTGAAAACATTATTTCCAGTTGGGGGTACAGAAACTCTTCCACTGTaGTTAATAATTCCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTYNGLMCLKTLFPVGGTETLPL*LIIPSE Trigger: TTCAGAGGGAATTATTAAGCACAGTGGAAGAGTTTC...TGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAGGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATAGCAGTAAGCCTTTATaGAGAGTAAAATATCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQMGTRFTSARLHNMKLNSSKPL*RVKYRR Trigger: CCTACGATATTTTACTCTCCATAAAGGCTTACTGCT...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR TCA 90 bp | GCAATACATATCTTAGAGGAAAGTAAGTTGGGCTTTGAGTTATATAAGACACTGAAATTTTTGATGCTGTaGTTAACGTATGCACCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AIHILEESKLGFELYKTLKFLML*LTYAPA Trigger: CGCTGGTGCATACGTTAATCACAGCATCAAAAATTT...CAGTGTCTTATATAACTCAAAGCCCAACTTACTTTCCTCTAAGATATGTATTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR TCA 90 bp | GAATTCCATGAGACACCATCAATCTCTATATCACCTTTAATGTTCAACATTCGTTTCCCTAGGATAGCTTaGAAAATAACCAGGATTATC | + |
|
Preference number: 4 (lower is better) Translates to: EFHETPSISISPLMFNIRFPRIA*KITRII Trigger: GATAATCCTGGTTATTTTTCAAGCTATCCTAGGGAA...ACGAATGTTGAACATTAAAGGTGATATAGAGATTGATGGTGTCTCATGGAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | GAATTCCATGAGACACCATCAATCTCTATATCACCTTTAATGTTCAACATTCGTGTTTTCTGTCACCATTaGTTTGTTGTACTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EFHETPSISISPLMFNIRVFCHH*FVVLSP Trigger: TGGAGAAAGTACAACAAAGCAATGGTGACAGAAAAC...ACGAATGTTGAACATTAAAGGTGATATAGAGATTGATGGTGTCTCATGGAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR GCA 90 bp | GTACCATTGTTTCCACTGTTAACAGGGTTGTTTTTAAGCAACCATAACACAAATGTTTTCTGTCACCATTaGTTTGTTGTACTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPLFPLLTGLFLSNHNTNVFCHH*FVVLSP Trigger: TGGAGAAAGTACAACAAAGCAATGGTGACAGAAAAC...ATTTGTGTTATGGTTGCTTAAAAACAACCCTGTTAACAGTGGAAACAATGGTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| 3UTR CAA 72 bp | AATAAGCCAAGTAAGACTTATTACTCCCTCCAATTCTaGCCCAGAAAAACTCTTCTAAAAACAGATCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NKPSKTYYSLQF*PRKTLLKTDLV Trigger: TACCAGATCTGTTTTTAGAAGAGTTTTTCTGGGCAAGAATTGGAGGGAGTAATAAGTCTTACTTGGCTTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| 3UTR CAA 72 bp | TTCTTCATCTTTCCATTTTCCATTGGGATCCAGGTTTaGTCTGAATGTTCCAGAAAAGATAAATACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFIFPFSIGIQV*SECSRKDKYFL Trigger: CAGAAAGTATTTATCTTTTCTGGAACATTCAGACAAAACCTGGATCCCAATGGAAAATGGAAAGATGAAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAAGAGTATATCCACAGGTATTGTCCCTCAGGTGCCCAGCCTGGAACTCTCGTCCGAGGCTTGTGCTaGCTGGAGTGGCGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KQEYIHRYCPSGAQPGTLVRGLC*LEWRPW Trigger: CCAGGGCCGCCACTCCAGCAAGCACAAGCCTCGGAC...GAGAGTTCCAGGCTGGGCACCTGAGGGACAATACCTGTGGATATACTCTTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGAGGCTCAGGGCAAGCAAAGTGTCAGCCACTCCCACGTAAATGTAAAAACAGGCTGGACAGCCTaGGTGACTTCCCCTAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SEEAQGKQSVSHSHVNVKTGWTA*VTSPRY Trigger: ATACCTAGGGGAAGTCACCAAGGCTGTCCAGCCTGT...TTTTACATTTACGTGGGAGTGGCTGACACTTTGCTTGCCCTGAGCCTCTTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCCACCTGTCTCTCTCCAAGAACTGTGTaGTCTTGTTCTGCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLCGLGSLATEPQGSTCLSPRTV*SCSANL Trigger: CAAGTTTGCAGAACAAGACAACACAGTTCTTGGAGA...GAGACAGGTGGATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CAA 90 bp | CCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCATTAAAAACGACTGTTTGGGTTaGCTCCACGGGGCAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSGGRLNLWYHLLQSCIKNDCLG*LHGAEE Trigger: TTCCTCTGCCCCGTGGAGCAAACCCAAACAGTCGTT...TTTAATGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR CAA 90 bp | TCTCTTTGTGGGCTAGGATCACTTGCCACAGAGCCCCAGGGATCCACCTGTCTCATTGGGATCCAGGTTTaGTCTGAATGTTCCAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLCGLGSLATEPQGSTCLIGIQV*SECSRK Trigger: TTTTCTGGAACATTCAGACAAAACCTGGATCCCAAT...GAGACAGGTGGATCCCTGGGGCTCTGTGGCAAGTGATCCTAGCCCACAAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGAGGCTCAGGGCAAGCAAAGTGTCAGCCACTCCCACGTAAATGTAAAATTGCTAAAGAAATCCTaGCACGCTGACCTCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SEEAQGKQSVSHSHVNVKLLKKS*HADLHS Trigger: TGAGTGGAGGTCAGCGTGCAAGGATTTCTTTAGCAA...TTTTACATTTACGTGGGAGTGGCTGACACTTTGCTTGCCCTGAGCCTCTTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS CCA 90 bp | TCTAGTTTTTCAGACAAGTGGTCAGCTGAATCAGCAGAAGGGGCTTaGTATATGTCTGACAACTCCAAGTGGTGTCTGTACCCTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSFSDKWSAESAEGA*YMSDNSKWCLYPFL Trigger: GAGGAAAGGGTACAGACACCACTTGGAGTTGTCAGACATATACCAAGCCCCTTCTGCTGATTCAGCTGACCACTTGTCTGAAAAACTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCCCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCATATCAAGAACGCGGCTaGACAACTTTAAAGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CAHQGAVLTFGTIFFKAAYQERG*TTLKSS Trigger: AGAAGACTTTAAAGTTGTCAAGCCGCGTTCTTGATA...TGCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGCCCATCAGGGGGCCGTCTTAACCTTTGGTACCATCTTCTTCAAAGCTGCCAGTACTTTATACTCTaGTTTCTGCAGGAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MCPSGGRLNLWYHLLQSCQYFIL*FLQEIL Trigger: CAGGATTTCCTGCAGAAACAAGAGTATAAAGTACTG...GCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGCACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | GGCAGTGTGCAAATTCAGAGCTTTGTGGAACAGAGTTTCAAAGTAAGTCTGGCGTTGCTAAAGAAATCCTaGCACGCTGACCTCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSVQIQSFVEQSFKVSLALLKKS*HADLHS Trigger: TGAGTGGAGGTCAGCGTGCAAGGATTTCTTTAGCAA...CGCCAGACTTACTTTGAAACTCTGTTCCACAAAGCTCTGAATTTGCACACTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | AGTAAGTCTGGCGTCGGAAGGCTCGAAGTGTCCAGAGTCCTTTTAAGCTTGTCAACCTTGTCCTTTGTCTaGCTAAAGAAATCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SKSGVGRLEVSRVLLSLSTLSFV*LKKSLH Trigger: GTGCAAGGATTTCTTTAGCAAGACAAAGGACAAGGT...TGACAAGCTTAAAAGGACTCTGGACACTTCGAGCCTTCCGACGCCAGACTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115405.9 |
||
| CDS-3UTR CAA 90 bp | ATGACCAAAAATCGCTGGCAATCCAACATCGCTTCTATCCTGTGTTCACAGAGGCAGCTGAAGAAGAGTTaGGAGATAAAGCTGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MTKNRWQSNIASILCSQRQLKKS*EIKLAF Trigger: GAAAGCCAGCTTTATCTCCAAACTCTTCTTCAGCTG...CCTCTGTGAACACAGGATAGAAGCGATGTTGGATTGCCAGCGATTTTTGGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACGCTGGGGATTCTTTTTaGAAGCTTGTTCTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CCLRTTQMGTRFTSARLHAGDSF*KLVLCP Trigger: GGGACAGAGAACAAGCTTCAAAAAAGAATCCCCAGC...GTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATACAGGCTGGACAGCCTaGGTGACTTCCCCTAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TQMGTRFTSARLHNMKLNTGWTA*VTSPRY Trigger: ATACCTAGGGGAAGTCACCAAGGCTGTCCAGCCTGT...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | ATAAGTGTGTCGATTTCCATATCAAGGAAATTATCCAGGCCACTTTATGGGACTACAGGCTGGACAGCCTaGGTGACTTCCCCTAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ISVSISISRKLSRPLYGTTGWTA*VTSPRY Trigger: ATACCTAGGGGAAGTCACCAAGGCTGTCCAGCCTGT...AGTCCCATAAAGTGGCCTGGATAATTTCCTTGATATGGAAATCGACACACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCAAGTAAGACTTATTACTCCCTCCAATTCTTGCCCAGAAAAACTCTTCTAACAGGCTGGACAGCCTaGGTGACTTCCCCTAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KPSKTYYSLQFLPRKTLLTGWTA*VTSPRY Trigger: ATACCTAGGGGAAGTCACCAAGGCTGTCCAGCCTGT...TAGAAGAGTTTTTCTGGGCAAGAATTGGAGGGAGTAATAAGTCTTACTTGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAGTCTGGCGTCGGAAGGCTCGAAGTGTCCAGAGTCCTTTTAAGCTTGTCATATCAAGAACGCGGCTaGACAACTTTAAAGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKSGVGRLEVSRVLLSLSYQERG*TTLKSS Trigger: AGAAGACTTTAAAGTTGTCAAGCCGCGTTCTTGATA...TGACAAGCTTAAAAGGACTCTGGACACTTCGAGCCTTCCGACGCCAGACTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAAGAGTATATCCACAGGTATTGTCCCTCAGGTGCCCAGCCTGGAACTCTCCTTGCGATAATCTCCTaGAATATACATCCACTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KQEYIHRYCPSGAQPGTLLAIIS*NIHPLH Trigger: ATGAAGTGGATGTATATTCAAGGAGATTATCGCAAG...GAGAGTTCCAGGCTGGGCACCTGAGGGACAATACCTGTGGATATACTCTTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR CAA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGCATGTCTATTCTCATTaGGAACCAGCGCAAGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FQDLDILNPDGLLDHQMSHVYSH*EPAQGC Trigger: GCAACCTTGCGCTGGTTCCAAATGAGAATAGACATG...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
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| CDS CCA 90 bp | GAAGCTTGTTCTCTGTCCCATTCTCTTTCTAGTTTTTCAGACAAGTaGTCAGCTGAATCAGCAGAAGGGGCTTGGTATATGTCTGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: EACSLSHSLSSFSDK*SAESAEGAWYMSDN Trigger: GTTGTCAGACATATACCAAGCCCCTTCTGCTGATTCAGCTGACCACTTGTCTGAAAAACTAGAAAGAGAATGGGACAGAGAACAAGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGCAGCTGAAGAAGAGTTaGGAGATAAAGCTGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FQDLDILNPDGLLDHQMSQLKKS*EIKLAF Trigger: GAAAGCCAGCTTTATCTCCAAACTCTTCTTCAGCTG...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | CGTAGGTATGTGTTCCATGTTGTCACCGGGGGTATCTTGATCACATCATCAAGATCTCCAAGAACTGTGTaGTCTTGTTCTGCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRYVFHVVTGGILITSSRSPRTV*SCSANL Trigger: CAAGTTTGCAGAACAAGACAACACAGTTCTTGGAGA...TCTTGATGATGTGATCAAGATACCCCCGGTGACAACATGGAACACATACCTACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | AATTTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGGCCTTCAGATTCCAGTaGTTTGAGCTGCTGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NFQDLDILNPDGLLDHQMAFRFQ*FELLCC Trigger: ACAGCACAGCAGCTCAAACAACTGGAATCTGAAGGC...CATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
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| CDS-3UTR CAA 90 bp | TGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACTCGTACTGCCAGACATaGCTCTCTTCTATGACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CCLRTTQMGTRFTSARLHSYCQT*LSSMTK Trigger: TTTGGTCATAGAAGAGAGCAATGTCTGGCAGTACGA...GTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
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| CDS GCA 90 bp | ATCATTCCAAAAGAATCATACCATATCTGTACGGCAGTGGGGAACTaGCGTGTGACTGACATACGTAGGACAATGCAGAATGAAATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IIPKESYHICTAVGN*RVTDIRRTMQNEMV Trigger: AACCATTTCATTCTGCATTGTCCTACGTATGTCAGTCACACGGCAGTTCCCCACTGCCGTACAGATATGGTATGATTCTTTTGGAATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | ACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTGGGGGACAGTCTCTTTTCTaGGAGATCATCAGACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TNTTFLHFRSLKDLLLSGGQSLF*EIIRLS Trigger: GGAGAGTCTGATGATCTCCAAGAAAAGAGACTGTCC...CCCAGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
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| CDS-3UTR CAA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGTCTTTCCATTTTCCATaGGGATCCAGGTTTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FQDLDILNPDGLLDHQMSSFHFP*GSRFCL Trigger: CAGACAAAACCTGGATCCCAATGGAAAATGGAAAGA...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
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| CDS-3UTR CAA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATTCCACAAGGGTAAAGTaGAGCTGTCCAGGAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: TQMGTRFTSARLHNMKLNSTRVK*SCPGNC Trigger: GCAGTTTCCTGGACAGCTCAACTTTACCCTTGTGGA...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
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| CDS-3UTR CAA 90 bp | TGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACTCAAGCAGTATGATCTaGGCCTTACTGAGAACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: CCLRTTQMGTRFTSARLHSSSMI*ALLRTD Trigger: ATCAGTTCTCAGTAAGGCCAAGATCATACTGCTTGA...GTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
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| CDS-3UTR CAA 90 bp | CGTAGGTATGTGTTCCATGTTGTCACCGGGGGTATCTTGATCACATCATCAAGACTAAATAGGGAGACCTaGTCCTTTGTCTGTAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: RRYVFHVVTGGILITSSRLNRET*SFVCKQ Trigger: TTGTTTACAGACAAAGGACAAGGTCTCCCTATTTAG...TCTTGATGATGTGATCAAGATACCCCCGGTGACAACATGGAACACATACCTACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140407.8 |
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| CDS GCA 90 bp | TCTCCAAGAACTGTGTTGTCTTGTTCTGCAAACTTGGTGATGTCCTaGTGTAGTTGGCAAGCTTTGACAACACTCTTATATCTGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPRTVLSCSANLVMS*CSWQALTTLLYLYS Trigger: TGAGTACAGATATAAGAGTGTTGTCAAAGCTTGCCAACTACAGCAGGACATCACCAAGTTTGCAGAACAAGACAACACAGTTCTTGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | TGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACCAGTACTTTATACTCTaGTTTCTGCAGGAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CCLRTTQMGTRFTSARLHQYFIL*FLQEIL Trigger: CAGGATTTCCTGCAGAAACAAGAGTATAAAGTACTG...GTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | CTACAATGGGCTCATGTGTTTGAAAACATTATTTCCAGTTGGGGGTACACTGGGTGTTTTCTGTCACCATaGCTTTGTTGTACTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQWAHVFENIISSWGYTGCFLSP*LCCTFS Trigger: GGAGAAAGTACAACAAAGCAATGGTGACAGAAAACA...CCCAGTGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
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| CDS-3UTR CAA 90 bp | TTGAACTCTCTTCCAAAACAGTCTCTTAAAGAGCAAGTCGCAGGCTTCACCCTTCCACTGTTAACAGGGTaGTTTTTAAGCAACCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: LNSLPKQSLKEQVAGFTLPLLTG*FLSNHN Trigger: GTTATGGTTGCTTAAAAACAACCCTGTTAACAGTGG...AAGGGTGAAGCCTGCGACTTGCTCTTTAAGAGACTGTTTTGGAAGAGAGTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
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| CDS-3UTR CAA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCCTAGAGACGGGTTTCTaGAACTTCTTCTTCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KREHVLSENHTDGYKIYILETGF*NFFFCL Trigger: GAGACAGAAGAAGAAGTTCAAGAAACCCGTCTCTAG...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
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| CDS-3UTR CAA 90 bp | TGCACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTCAGCTGAAGAAGAGTTaGGAGATAAAGCTGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CTNTTFLHFRSLKDLLLSQLKKS*EIKLAF Trigger: GAAAGCCAGCTTTATCTCCAAACTCTTCTTCAGCTG...AGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | AATACCTACAATGGGCTCATGTGTTTGAAAACATTATTTCCAGTTGGGGGTACACAGCTGAAGAAGAGTTaGGAGATAAAGCTGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NTYNGLMCLKTLFPVGGTQLKKS*EIKLAF Trigger: GAAAGCCAGCTTTATCTCCAAACTCTTCTTCAGCTG...TGTACCCCCAACTGGAAATAATGTTTTCAAACACATGAGCCCATTGTAGGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
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| CDS-3UTR CAA 90 bp | TTCCAAGACCTGGATATCCTTAATCCTGATGGGTTACTAGATCACCAGATGTCGAGTCCTTCATCAAATTaGTTCAGGTTGTTGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FQDLDILNPDGLLDHQMSSPSSN*FRLLER Trigger: TCTTTCCAACAACCTGAACAAATTTGATGAAGGACT...CGACATCTGGTGATCTAGTAACCCATCAGGATTAAGGATATCCAGGTCTTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCTCTCCAAGAACTGTGTaGTCTTGTTCTGCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KREHVLSENHTDGYKIYISPRTV*SCSANL Trigger: CAAGTTTGCAGAACAAGACAACACAGTTCTTGGAGA...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | ATATCAAGGAAATTATCCAGGCCACTTTATGGGACTGAAACAGTTCTTTTCCTATTGCTAAAGAAATCCTaGCACGCTGACCTCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISRKLSRPLYGTETVLFLLLKKS*HADLHS Trigger: TGAGTGGAGGTCAGCGTGCAAGGATTTCTTTAGCAA...TAGGAAAAGAACTGTTTCAGTCCCATAAAGTGGCCTGGATAATTTCCTTGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | TTCCTCAGTAAACTGGTCAAAAGTATCATACCCCATGAGTTTCGAACTGAAGTCTGTTTTCTGTCACCATaGCTTTGTTGTACTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLSKLVKSIIPHEFRTEVCFLSP*LCCTFS Trigger: GGAGAAAGTACAACAAAGCAATGGTGACAGAAAACA...GACTTCAGTTCGAAACTCATGGGGTATGATACTTTTGACCAGTTTACTGAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | AAAAGAGAGCATGTGTTGTCTGAGAACCACACAGATGGGTACAAGATTTACATCAGGTCTCAGTTAGAATaGAACTTCTTCTTTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KREHVLSENHTDGYKIYIRSQLE*NFFFPQ Trigger: CTGAGGAAAGAAGAAGTTCAATTCTAACTGAGACCT...GATGTAAATCTTGTACCCATCTGTGTGGTTCTCAGACAACACATGCTCTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS TCA 90 bp | TTCAAATTGATGTTTTTCAGCACAGGATTTCCCACAAGGCAGAGATaGCTGAAACTGACATTGTTCTCATCACTGGAATGTTTTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FKLMFFSTGFPTRQR*LKLTLFSSLECFLS Trigger: TGACAGAAAACATTCCAGTGATGAGAACAATGTCAGTTTCAGTCATCTCTGCCTTGTGGGAAATCCTGTGCTGAAAAACATCAATTTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTTGCCCAGAAAAACTCTTCTAAAAACAGATCTGGTAACAAGCCCAGAACATATCAAGAACGCGGCTaGACAACTTTAAAGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILAQKNSSKNRSGNKPRTYQERG*TTLKSS Trigger: AGAAGACTTTAAAGTTGTCAAGCCGCGTTCTTGATA...TGTTCTGGGCTTGTTACCAGATCTGTTTTTAGAAGAGTTTTTCTGGGCAAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGTGTCGATTTCCATATCAAGGAAATTATCCAGGCCACTTTATGGGACTTATCAAGAACGCGGCTaGACAACTTTAAAGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ISVSISISRKLSRPLYGTYQERG*TTLKSS Trigger: AGAAGACTTTAAAGTTGTCAAGCCGCGTTCTTGATA...AGTCCCATAAAGTGGCCTGGATAATTTCCTTGATATGGAAATCGACACACTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTCAGTAAACTGGTCAAAAGTATCATACCCCATGAGTTTCGAACTGAAGTCAGTCCTTCATCAAATTaGTTCAGGTTGTTGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLSKLVKSIIPHEFRTEVSPSSN*FRLLER Trigger: TCTTTCCAACAACCTGAACAAATTTGATGAAGGACT...GACTTCAGTTCGAAACTCATGGGGTATGATACTTTTGACCAGTTTACTGAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTTGCCCAGAAAAACTCTTCTAAAAACAGATCTGGTAACAAGCCCAGAACACAGTACTTTATACTCTaGTTTCTGCAGGAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILAQKNSSKNRSGNKPRTQYFIL*FLQEIL Trigger: CAGGATTTCCTGCAGAAACAAGAGTATAAAGTACTG...TGTTCTGGGCTTGTTACCAGATCTGTTTTTAGAAGAGTTTTTCTGGGCAAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
||
| CDS-3UTR CAA 90 bp | ACACAGATGGGTACAAGATTTACATCAGCTCGTCTTCACAACATGAAGTTGAATTGTTTTCTGTCACCATaGCTTTGTTGTACTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQMGTRFTSARLHNMKLNCFLSP*LCCTFS Trigger: GGAGAAAGTACAACAAAGCAATGGTGACAGAAAACA...ATTCAACTTCATGTTGTGAAGACGAGCTGATGTAAATCTTGTACCCATCTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
||
| CDS-3UTR CAA 90 bp | ACTAACACAACCTTCCTTCACTTCAGAAGTCTTAAAGATCTGTTGCTTTCTGGGGAAATTTTAGTACCATaGTTTCCACTGTTAACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TNTTFLHFRSLKDLLLSGEILVP*FPLLTG Trigger: CCCTGTTAACAGTGGAAACAATGGTACTAAAATTTC...CCCAGAAAGCAACAGATCTTTAAGACTTCTGAAGTGAAGGAAGGTTGTGTTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045706.12 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGTGTCGATTTCCATATCAAGGAAATTATCCAGGCCACTTTATGGGACTAGTCCTTCATCAAATTaGTTCAGGTTGTTGGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: ISVSISISRKLSRPLYGTSPSSN*FRLLER Trigger: TCTTTCCAACAACCTGAACAAATTTGATGAAGGACT...AGTCCCATAAAGTGGCCTGGATAATTTCCTTGATATGGAAATCGACACACTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | GCAATACATATCTTAGAGGAAAGTAAGTTGGGCTTTGAGTTATATAAGACACTGCAGTACTTTATACTCTaGTTTCTGCAGGAAATCCTG | + |
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Preference number: 5 (lower is better) Translates to: AIHILEESKLGFELYKTLQYFIL*FLQEIL Trigger: CAGGATTTCCTGCAGAAACAAGAGTATAAAGTACTG...CAGTGTCTTATATAACTCAAAGCCCAACTTACTTTCCTCTAAGATATGTATTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | GTACCATTGTTTCCACTGTTAACAGGGTTGTTTTTAAGCAACCATAACACAAATTGTTTTCTGTCACCATaGCTTTGTTGTACTTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: VPLFPLLTGLFLSNHNTNCFLSP*LCCTFS Trigger: GGAGAAAGTACAACAAAGCAATGGTGACAGAAAACA...ATTTGTGTTATGGTTGCTTAAAAACAACCCTGTTAACAGTGGAAACAATGGTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115405.9 ENSMUST00000140407.8 |
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| CDS TCA 90 bp | AAGATGATATTTTCTTTGATAGTACCCGGCATAATCCAAGAAAATTaGGAGCAGAATGAAACTCTTCCACTGTGCTTAATAATTCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: KMIFSLIVPGIIQEN*EQNETLPLCLIIPS Trigger: AGAGGGAATTATTAAGCACAGTGGAAGAGTTTCATTCTGCTCTCAATTTTCTTGGATTATGCCGGGTACTATCAAAGAAAATATCATCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
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| CDS-3UTR CAA 90 bp | TACAATTTTCTTCATCTAAGCATTCCAATGATCTACCTGTGTCCAGAATGTTGTAGTCCTTCATCAAATTaGTTCAGGTTGTTGGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: YNFLHLSIPMIYLCPECCSPSSN*FRLLER Trigger: TCTTTCCAACAACCTGAACAAATTTGATGAAGGACT...ACAACATTCTGGACACAGGTAGATCATTGGAATGCTTAGATGAAGAAAATTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129452.8 |
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| CDS TCA 72 bp | CATACCATATCTGTACGGCAGTGGGGAACTGCCGTGTaGCTGACATACGTAGGACAATGCAGAATGAAATGG | + |
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Preference number: 6 (lower is better) Translates to: HTISVRQWGTAV*LTYVGQCRMKW Trigger: CCATTTCATTCTGCATTGTCCTACGTATGTCAGTCACACGGCAGTTCCCCACTGCCGTACAGATATGGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
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| CDS TCA 72 bp | CTTGTCCTTTGTCTTGCTAAAGAAATCCTTGCACGCTaGCCTCCACTCAGTGTGACTCCACCTTCTCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: LVLCLAKEILAR*PPLSVTPPSPR Trigger: TCTTGGAGAAGGTGGAGTCACACTGAGTGGAGGTCAGCGTGCAAGGATTTCTTTAGCAAGACAAAGGACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115405.9 |
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| CDS CCA 72 bp | GCAGAAGGGGCTTGGTATATGTCTGACAACTCCAAGTaGTGTCTGTACCCTTTCCTCAAAATTGGTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: AEGAWYMSDNSK*CLYPFLKIGVV Trigger: GACCACACCAATTTTGAGGAAAGGGTACAGACACCACTTGGAGTTGTCAGACATATACCAAGCCCCTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
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| CDS CCA 72 bp | TCAGACAAGTGGTCAGCTGAATCAGCAGAAGGGGCTTaGTATATGTCTGACAACTCCAAGTGGTGTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: SDKWSAESAEGA*YMSDNSKWCLY Trigger: GTACAGACACCACTTGGAGTTGTCAGACATATACCAAGCCCCTTCTGCTGATTCAGCTGACCACTTGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
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| CDS TCA 72 bp | CAAATGAGAAACCTTGCTAAAGAAATCCTTGCACGCTaGCCTCCACTCAGTGTGACTCCACCTTCTCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: QMRNLAKEILAR*PPLSVTPPSPR Trigger: TCTTGGAGAAGGTGGAGTCACACTGAGTGGAGGTCAGCGTGCAAGGATTTCTTTAGCAAGGTTTCTCATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140407.8 |
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| CDS TCA 72 bp | TTATATACTGCTCTTGCTAAAGAAATCCTTGCACGCTaGCCTCCACTCAGTGTGACTCCACCTTCTCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: LYTALAKEILAR*PPLSVTPPSPR Trigger: TCTTGGAGAAGGTGGAGTCACACTGAGTGGAGGTCAGCGTGCAAGGATTTCTTTAGCAAGAGCAGTATATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045706.12 ENSMUST00000115406.2 |
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| CDS GCA 72 bp | AAAGAATCATACCATATCTGTACGGCAGTGGGGAACTaGCGTGTGACTGACATACGTAGGACAATGCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: KESYHICTAVGN*RVTDIRRTMQN Trigger: ATTCTGCATTGTCCTACGTATGTCAGTCACACGGCAGTTCCCCACTGCCGTACAGATATGGTATGATTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
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| CDS CAA 72 bp | CCTTCTCCAAGAACTGTGTTGTCTTGTTCTGCAAACTaGGTGATGTCCTGCTGTAGTTGGCAAGCTTTGACA | + |
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Preference number: 6 (lower is better) Translates to: PSPRTVLSCSAN*VMSCCSWQALT Trigger: TGTCAAAGCTTGCCAACTACAGCAGGACATCACCAAGTTTGCAGAACAAGACAACACAGTTCTTGGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000140407.8 |
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| CDS CCA 72 bp | TCTCTGTCCCATTCTCTTTCTAGTTTTTCAGACAAGTaGTCAGCTGAATCAGCAGAAGGGGCTTGGTATATG | + |
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Preference number: 6 (lower is better) Translates to: SLSHSLSSFSDK*SAESAEGAWYM Trigger: CATATACCAAGCCCCTTCTGCTGATTCAGCTGACCACTTGTCTGAAAAACTAGAAAGAGAATGGGACAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
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| CDS CCA 72 bp | AGAGAAGGCATAAGCCTATGCCAAGGTAAATGGCAATaGAACGTTCCACCTTGTTTTCTGGATCATAGGATG | + |
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Preference number: 6 (lower is better) Translates to: REGISLCQGKWQ*NVPPCFLDHRM Trigger: CATCCTATGATCCAGAAAACAAGGTGGAACGTTCCATTGCCATTTACCTTGGCATAGGCTTATGCCTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
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| CDS TCA 72 bp | GTGATCACGAGTCTTTCATTGATCTTTGCAGCTCTCTaGTCTCTGTACTTCACCATCATCTTCCCTAGGATA | + |
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Preference number: 6 (lower is better) Translates to: VITSLSLIFAAL*SLYFTIIFPRI Trigger: TATCCTAGGGAAGATGATGGTGAAGTACAGAGATCAGAGAGCTGCAAAGATCAATGAAAGACTCGTGATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
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| CDS GCA 72 bp | ACTGTGTTGTCTTGTTCTGCAAACTTGGTGATGTCCTaGTGTAGTTGGCAAGCTTTGACAACACTCTTATAT | + |
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Preference number: 6 (lower is better) Translates to: TVLSCSANLVMS*CSWQALTTLLY Trigger: ATATAAGAGTGTTGTCAAAGCTTGCCAACTACAGCAGGACATCACCAAGTTTGCAGAACAAGACAACACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000140407.8 |
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| CDS TCA 72 bp | CACCTCTCTCAAGTTTTCAATCATTTTCTCCATCGCTaGTTCCCAACAATATGCCTTAACAGAATAGATATT | + |
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Preference number: 6 (lower is better) Translates to: HLSQVFNHFLHR*FPTICLNRIDI Trigger: AATATCTATTCTGTTAAGGCATATTGTTGGGAATCAGCGATGGAGAAAATGATTGAAAACTTGAGAGAGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
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| CDS TCA 72 bp | TTTTCTTTGATAGTACCCGGCATAATCCAAGAAAATTaGGAGCAGAATGAAACTCTTCCACTGTGCTTAATA | + |
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Preference number: 6 (lower is better) Translates to: FSLIVPGIIQEN*EQNETLPLCLI Trigger: TATTAAGCACAGTGGAAGAGTTTCATTCTGCTCTCAATTTTCTTGGATTATGCCGGGTACTATCAAAGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045706.12 ENSMUST00000115405.9 ENSMUST00000115406.2 ENSMUST00000129452.8 ENSMUST00000140407.8 |
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