Pregenerated sensors for CFP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001128Ensembl transcript IDs: ENSMUST00000001156.8
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGGAAGCAAGGGATGCAGAGCACAGGGTCTaGGCCTGTGGCTGGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLVYCGLESQGVRMEARDAEHRV*ACGWQD Trigger: ATCCTGCCAGCCACAGGCTCAGACCCTGTGCTCTGC...ATCCCTTGCTTCCATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGTTCCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGCAGGCCTGTGATTGCTaGGCCTCTCCTGGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQVPPSSLQNLRKSLERLQACDC*ASPGQW Trigger: CCACTGCCCAGGAGAGGCCCAGCAATCACAGGCCTG...CAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGGAACCTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGGAAGCGGTGTCACAGGCCTGTaGTTGCTGGGCCTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKAGLLWSRKSGGQNGSGVTGL*LLGLSW Trigger: CCAGGAGAGGCCCAGCAATCACAGGCCTGTGACACC...GCTTCCATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGGAAGCGCCTCTCCTGGGCAGTaGCCCCCACACTTAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRKAGLLWSRKSGGQNGSASPGQ*PPHLGA Trigger: TGCTCCTAAGTGTGGGGGCCACTGCCCAGGAGAGGC...GCTTCCATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGGCTCAAAGGGCTCCATaGCCCCCAGCCACCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSLERLVYCGLESQGVRMAQRAP*PPATSH Trigger: GTGGCTGGTGGCTGGGGGCCATGGAGCCCTTTGAGC...CATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGACTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGGAAGCGGTTTCCCAGGGGGCTaGTGTGAAGGTGCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRKAGLLWSRKSGGQNGSGFPGG*CEGAGA Trigger: TGCACCAGCACCTTCACACCAGCCCCCTGGGAAACC...GCTTCCATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGGAAGCAGCAGGAGCCACTaGGGGGCTTGCATTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ESRKAGLLWSRKSGGQNGSSRSH*GACISA Trigger: TGCTGAAATGCAAGCCCCTCAGTGGCTCCTGCTGCT...TCCATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGTTCCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGTCCCAAGTAGGCCTTTaGACCTGCCAGAGGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQVPPSSLQNLRKSLERLSQVGL*TCQRTP Trigger: AGGAGTCCTCTGGCAGGTGCAAAGGCCTACTTGGGA...CAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGGAACCTGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGGAAGCCGTTGCTCTAGGGTCTaGCCCAGGCCACAAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SRKAGLLWSRKSGGQNGSRCSRV*PRPQVT Trigger: TGTGACTTGTGGCCTGGGCCAGACCCTAGAGCAACG...GCTTCCATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGGAAGCAAGGGATCTTGAACGTGACTGCTaGCCTGGGGTTCCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RLVYCGLESQGVRMEARDLERDC*PGVPSQ Trigger: CTGTGAAGGAACCCCAGGCCAGCAGTCACGTTCAAG...ATCCCTTGCTTCCATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGTTCCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGTTCACACAGTGGCCGTaGAGTCCCCCAGAAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GQVPPSSLQNLRKSLERLFTQWP*SPPEGN Trigger: GTTACCTTCTGGGGGACTCCACGGCCACTGTGTGAA...CAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGGAACCTGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTGTCTCATAGGCTGGTCCTaGGCAGGGTTTCCCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSLQNLRKSLERLVYCLIGWS*AGFPRG Trigger: CCCCCTGGGAAACCCTGCTCAGGACCAGCCTATGAG...ACAATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGGAGAGGACTCCTCATACTaGGTGAAGCAGAGCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESRKAGLLWSRKSGGQNGEDSSY*VKQSTG Trigger: CCCTGTGCTCTGCTTCACCCAGTATGAGGAGTCCTC...TCCATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTTGCTGGGCCTCTCCTaGGCAGTGGCCCCCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: VPPSSLQNLRKSLERLVYLLGLS*AVAPTL Trigger: AAGTGTGGGGGCCACTGCCCAGGAGAGGCCCAGCAA...ATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGTTCCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTGGGACTACATGGTaGTGTGCACAGACTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQVPPSSLQNLRKSLERLVGTTW*CAQTPG Trigger: ACCTGGAGTCTGTGCACACCACCATGTAGTCCCAAC...CAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGGAACCTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | TCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGGTGTGCAGAGGCGCTaGCGGACACGGGTGGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLQNLRKSLERLVYCGLGVQRR*RTRVAL Trigger: CAACGCCACCCGTGTCCGCCAGCGCCTCTGCACACC...TAGACCACAATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGAGGCATAGGCAGCGTTaGGACAGCAGTCTTCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: KSLERLVYCGLESQGVRMRHRQR*DSSLLP Trigger: GGGTAGAAGACTGCTGTCTCAACGCTGCCTATGCCT...CATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGACTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATTCCACCACCAGCTTCTaGCCCTGTAGCGCTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: KESRKAGLLWSRKSGGQNSTTSF*PCSASH Trigger: GTGTGAAGCGCTACAGGGGCAGAAGCTGGTGGTGGA...ATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGACTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCCCAGGCCCCATGTGTaGGGCAGGTCTTCTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSLQNLRKSLERLVYCGPRPHV*GRSSGC Trigger: ACACCCAGAAGACCTGCCCCACACATGGGGCCTGGG...ACCACAATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCAGGTTCCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGGGGTTTCTTCTCTTCTaGGTCTTTGCAGACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WGQVPPSSLQNLRKSLERGFLLF*VFADRH Trigger: GTGCCTGTCTGCAAAGACCCAGAAGAGAAGAAACCC...CCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGGAACCTGCCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATACATTCTCAGAGCACTaGCCACCTCTGCCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KESRKAGLLWSRKSGGQNTFSEH*PPLPTQ Trigger: CTGTGTGGGCAGAGGTGGTCAGTGCTCTGAGAATGT...ATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGACTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTGTTTCCTTTGGAGCATGTaGCAGAGCAAGGCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSLQNLRKSLERLVYCFLWSM*QSKAPR Trigger: CCTGGGGGCCTTGCTCTGTCACATGCTCCAAAGGAA...ACAATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGGTCTCCTTAGGTTCTTaGGCACCACCAAGGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSLERLVYCGLESQGVRMVSLGS*APPRQD Trigger: ATCCTGCCTTGGTGGTGCTCAAGAACCTAAGGAGAC...CATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGACTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATTGCTGGTGCAGAACATaGGCGGCTTCGTGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KESRKAGLLWSRKSGGQNCWCRT*AASCLL Trigger: AAGGAGACACGAAGCCGCTCATGTTCTGCACCAGCA...ATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGACTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR TCA 90 bp | TCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGGAGACCTGCATGCCTaGCAGAGGCCACCATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLQNLRKSLERLVYCGLGDLHA*QRPPSC Trigger: GCATGATGGTGGCCTCTGTCAGGCATGCAGGTCTCC...TAGACCACAATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATGGGTTCCTTCACAGTTaGTGGACATTCTCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPPSSLQNLRKSLERLVYGFLHS*WTFSAG Trigger: GCCGGCTGAGAATGTCCATCAACTGTGAAGGAACCC...ATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTGTTTGTGGAGACCTGCATaGCTGACAGAGGCCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: PPSSLQNLRKSLERLVYCLWRPA*LTEATI Trigger: GATGGTGGCCTCTGTCAGGCATGCAGGTCTCCACAA...ACAATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTGTGGTTCTGGACAGCATGGCTaGTCCTCACAGGCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSLQNLRKSLERLVYCGSGQHG*SSQACS Trigger: GCTACAGGCCTGTGAGGACCAGCCATGCTGTCCAGA...ACCACAATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATGTAGGCCTTTGCACCTaGCAGAGGACTCCTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: VPPSSLQNLRKSLERLVYVGLCT*QRTPHT Trigger: AGTATGAGGAGTCCTCTGGCAGGTGCAAAGGCCTAC...ATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR TCA 90 bp | TCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAACTCCTCATACTGGGTaGAGCAGAGCACAGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLQNLRKSLERLVYCGLTPHTG*SRAQGL Trigger: CAGACCCTGTGCTCTGCTTCACCCAGTATGAGGAGT...TAGACCACAATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATACATTTGGTTCCGAGTaGCATCACCAGCACAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KESRKAGLLWSRKSGGQNTFGSE*HHQHKR Trigger: CCTTTTGTGCTGGTGATGCCACTCGGAACCAAATGT...ATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGACTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGGAGAGTTTTCCAGCACATaGCTTCCCATTAAATTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ESRKAGLLWSRKSGGQNGEFSST*LPIKFA Trigger: CGCAAATTTAATGGGAAGCCATGTGCTGGAAAACTC...TCCATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR GCA 90 bp | TCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGACTACATGGTGGTGTaGACAGACTCCAGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLQNLRKSLERLVYCGLDYMVV*TDSRYS Trigger: GGAGTACCTGGAGTCTGTGCACACCACCATGTAGTC...TAGACCACAATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTGTTCTCTTCTGGGTCTTTaGAGACAGGCACATGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PPSSLQNLRKSLERLVYCSLLGL*RQAHVD Trigger: GTCTACATGTGCCTGTCTGCAAAGACCCAGAAGAGA...ACAATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CCA 90 bp | TCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGCTTTGTTACACATTTaGTTCCGAGTGGCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLQNLRKSLERLVYCGLALLHI*FRVASP Trigger: TGGTGATGCCACTCGGAACCAAATGTGTAACAAAGC...TAGACCACAATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS GCA 90 bp | TCCATGGCCCCCAGCCACCAGCCACTGGGCAAGGTGGTAGGCCACTaGAGGCCTTATGCTCATAGGCTGGTCCTGAGCAGGGTTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SMAPSHQPLGKVVGH*RPYAHRLVLSRVSQ Trigger: CTGGGAAACCCTGCTCAGGACCAGCCTATGAGCATAAGGCCTGCAGTGGCCTACCACCTTGCCCAGTGGCTGGTGGCTGGGGGCCATGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS TCA 90 bp | GGTGCTGGTGCAGAACATGAGCGGCTTCGTGTCTCCTTAGGTTCTTaGGCACCACCAAGGCAGGATCCTGAGCAGGGGCTCCAGGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GAGAEHERLRVSLGS*APPRQDPEQGLQGP Trigger: GGGCCCCTGGAGCCCCTGCTCAGGATCCTGCCTTGGTGGTGCTCAAGAACCTAAGGAGACACGAAGCCGCTCATGTTCTGCACCAGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CCA 90 bp | CAGGGTCCCCACTCAGACCAGCCACCCATCTCTGGACAGCATGGCTaGTCCTCACAGGCCTGTAGCTGCCACTCAAGAGTTCCAGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGPHSDQPPISGQHG*SSQACSCHSRVPGA Trigger: GGCTCCTGGAACTCTTGAGTGGCAGCTACAGGCCTGTGAGGACCAGCCATGCTGTCCAGAGATGGGTGGCTGGTCTGAGTGGGGACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CCA 90 bp | TGGGGAGCAAAGGTGTGCAGAGGCGCTGGCGGACACGGGTGGCGTTaGGACTACATGGTGGTGTGCACAGACTCCAGGTACTCCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WGAKVCRGAGGHGWR*DYMVVCTDSRYSTV Trigger: CACAGTGGAGTACCTGGAGTCTGTGCACACCACCATGTAGTCCCAACGCCACCCGTGTCCGCCAGCGCCTCTGCACACCTTTGCTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CCA 90 bp | GGTACTTGGGGAGCAAAGGTGTGCAGAGGCGCTGGCGGACACGGGTaGCGTTGGGACTACATGGTGGTGTGCACAGACTCCAGGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTWGAKVCRGAGGHG*RWDYMVVCTDSRYS Trigger: GGAGTACCTGGAGTCTGTGCACACCACCATGTAGTCCCAACGCCACCCGTGTCCGCCAGCGCCTCTGCACACCTTTGCTCCCCAAGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CCA 90 bp | CCATGTGTGGGGCAGGTCTTCTGGGTGTCACAGGCCTGTGATTGCTaGGCCTCTCCTGGGCAGTGGCCCCCACACTTAGGAGCAGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: PCVGQVFWVSQACDC*ASPGQWPPHLGAGL Trigger: TAATCCTGCTCCTAAGTGTGGGGGCCACTGCCCAGGAGAGGCCCAGCAATCACAGGCCTGTGACACCCAGAAGACCTGCCCCACACATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CCA 90 bp | GAAACTGTAGGCGGGTACTTGGGGAGCAAAGGTGTGCAGAGGCGCTaGCGGACACGGGTGGCGTTGGGACTACATGGTGGTGTGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ETVGGYLGSKGVQRR*RTRVALGLHGGVHR Trigger: TCTGTGCACACCACCATGTAGTCCCAACGCCACCCGTGTCCGCCAGCGCCTCTGCACACCTTTGCTCCCCAAGTACCCGCCTACAGTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CCA 90 bp | TCTCTCCCAAGTAGGCCTTTGCACCTGCCAGAGGACTCCTCATACTaGGTGAAGCAGAGCACAGGGTCTGAGCCTGTGGCTGGCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: SLPSRPLHLPEDSSY*VKQSTGSEPVAGRI Trigger: TATCCTGCCAGCCACAGGCTCAGACCCTGTGCTCTGCTTCACCCAGTATGAGGAGTCCTCTGGCAGGTGCAAAGGCCTACTTGGGAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS TCA 90 bp | GGGCAGTGGCCCCCACACTTAGGAGCAGGATTATCACATACTCGTTaGCGGATCTGGGTTCCTTTGGAGCATGTGACAGAGCAAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GQWPPHLGAGLSHTR*RIWVPLEHVTEQGP Trigger: GGGGCCTTGCTCTGTCACATGCTCCAAAGGAACCCAGATCCGTCAACGAGTATGTGATAATCCTGCTCCTAAGTGTGGGGGCCACTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS TCA 90 bp | CACAGTGGCCGTGGAGTCCCCCAGAAGGTAACATTCTTCTCACCCTaGCCTTCAACCATTGAAACTGTAGGCGGGTACTTGGGGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HSGRGVPQKVTFFSP*PSTIETVGGYLGSK Trigger: TTTGCTCCCCAAGTACCCGCCTACAGTTTCAATGGTTGAAGGTCAGGGTGAGAAGAATGTTACCTTCTGGGGGACTCCACGGCCACTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCAGGTTCCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGACTGTAGGCGGGTACTaGGGGAGCAAAGGTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WGQVPPSSLQNLRKSLERTVGGY*GSKGVQ Trigger: CTGCACACCTTTGCTCCCCAAGTACCCGCCTACAGT...CCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGGAACCTGCCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATCTCCCAAGTAGGCCTTaGCACCTGCCAGAGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: KESRKAGLLWSRKSGGQNLPSRP*HLPEDS Trigger: GGAGTCCTCTGGCAGGTGCAAAGGCCTACTTGGGAG...ATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGACTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCAGGTTCCCCCTTCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCGGATCTGGGTTCCTTaGGAGCATGTGACAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: WGQVPPSSLQNLRKSLERRIWVP*EHVTEQ Trigger: TTGCTCTGTCACATGCTCCAAAGGAACCCAGATCCG...CCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGAAGGGGGAACCTGCCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATGGAAGCAAGGGATTTCTCTTCTGGGTCTTaGCAGACAGGCACATGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLVYCGLESQGVRMEARDFSSGS*QTGTCR Trigger: TCTACATGTGCCTGTCTGCAAAGACCCAGAAGAGAA...ATCCCTTGCTTCCATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGAAAGTCAGGGGGTCAGAATTGTCTCCTTAGGTTCTaGAGCACCACCAAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KESRKAGLLWSRKSGGQNCLLRF*STTKAG Trigger: TCCTGCCTTGGTGGTGCTCAAGAACCTAAGGAGACA...ATTCTGACCCCCTGACTTTCTAGACCACAATAAACCAGCCTTTCTAGACTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS TCA 90 bp | GTGTGCACAGACTCCAGGTACTCCACTGTGACCATGAACCTTTCATaGTACAGTTATGGATGTTATAGCAGTGTCGAATATCCTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VCTDSRYSTVTMNLS*YSYGCYSSVEYPGV Trigger: AACTCCAGGATATTCGACACTGCTATAACATCCATAACTGTATCATGAAAGGTTCATGGTCACAGTGGAGTACCTGGAGTCTGTGCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS-3UTR CAA 90 bp | TCGTCATTACAGAATCTTAGAAAGAGTCTAGAAAGGCTGGTTTATTGTGGTCTAGGGGTTCCTTCACAGTaGATGGACATTCTCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLQNLRKSLERLVYCGLGVPSQ*MDILSR Trigger: CCGGCTGAGAATGTCCATCAACTGTGAAGGAACCCC...TAGACCACAATAAACCAGCCTTTCTAGACTCTTTCTAAGATTCTGTAATGACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CCA 72 bp | GGCGGGTACTTGGGGAGCAAAGGTGTGCAGAGGCGCTaGCGGACACGGGTGGCGTTGGGACTACATGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGYLGSKGVQRR*RTRVALGLHGG Trigger: ACCACCATGTAGTCCCAACGCCACCCGTGTCCGCCAGCGCCTCTGCACACCTTTGCTCCCCAAGTACCCGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS GCA 72 bp | CCCAGCCACCAGCCACTGGGCAAGGTGGTAGGCCACTaGAGGCCTTATGCTCATAGGCTGGTCCTGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSHQPLGKVVGH*RPYAHRLVLSR Trigger: CCTGCTCAGGACCAGCCTATGAGCATAAGGCCTGCAGTGGCCTACCACCTTGCCCAGTGGCTGGTGGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CCA 72 bp | GGAGCAAAGGTGTGCAGAGGCGCTGGCGGACACGGGTaGCGTTGGGACTACATGGTGGTGTGCACAGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: GAKVCRGAGGHG*RWDYMVVCTDS Trigger: GGAGTCTGTGCACACCACCATGTAGTCCCAACGCCACCCGTGTCCGCCAGCGCCTCTGCACACCTTTGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CCA 72 bp | AAGGTGTGCAGAGGCGCTGGCGGACACGGGTGGCGTTaGGACTACATGGTGGTGTGCACAGACTCCAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KVCRGAGGHGWR*DYMVVCTDSRY Trigger: GTACCTGGAGTCTGTGCACACCACCATGTAGTCCCAACGCCACCCGTGTCCGCCAGCGCCTCTGCACACCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CAA 90 bp | TTGGGGAGCAAAGGTGTGCAGAGGCGCTGGCGGACACGGGTGGCGTaGGGACTACATGGTGGTGTGCACAGACTCCAGGTACTCCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGSKGVQRRWRTRVA*GLHGGVHRLQVLHC Trigger: ACAGTGGAGTACCTGGAGTCTGTGCACACCACCATGTAGTCCCAACGCCACCCGTGTCCGCCAGCGCCTCTGCACACCTTTGCTCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS TCA 72 bp | GGCCTTTGCACCTGCCAGAGGACTCCTCATACTGGGTaGAGCAGAGCACAGGGTCTGAGCCTGTGGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLCTCQRTPHTG*SRAQGLSLWLA Trigger: TGCCAGCCACAGGCTCAGACCCTGTGCTCTGCTTCACCCAGTATGAGGAGTCCTCTGGCAGGTGCAAAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CAA 72 bp | AAAGGTGTGCAGAGGCGCTGGCGGACACGGGTGGCGTaGGGACTACATGGTGGTGTGCACAGACTCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: KGVQRRWRTRVA*GLHGGVHRLQV Trigger: TACCTGGAGTCTGTGCACACCACCATGTAGTCCCAACGCCACCCGTGTCCGCCAGCGCCTCTGCACACCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS TCA 72 bp | ATACTCGTTGACGGATCTGGGTTCCTTTGGAGCATGTaGCAGAGCAAGGCCCCCAGGGTCCCCACTCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: ILVDGSGFLWSM*QSKAPRVPTQT Trigger: GGTCTGAGTGGGGACCCTGGGGGCCTTGCTCTGTCACATGCTCCAAAGGAACCCAGATCCGTCAACGAGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS TCA 72 bp | GCAGAACATGAGCGGCTTCGTGTCTCCTTAGGTTCTTaGGCACCACCAAGGCAGGATCCTGAGCAGGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AEHERLRVSLGS*APPRQDPEQGL Trigger: GAGCCCCTGCTCAGGATCCTGCCTTGGTGGTGCTCAAGAACCTAAGGAGACACGAAGCCGCTCATGTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CCA 72 bp | AGTAGGCCTTTGCACCTGCCAGAGGACTCCTCATACTaGGTGAAGCAGAGCACAGGGTCTGAGCCTGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRPLHLPEDSSY*VKQSTGSEPVA Trigger: AGCCACAGGCTCAGACCCTGTGCTCTGCTTCACCCAGTATGAGGAGTCCTCTGGCAGGTGCAAAGGCCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS GCA 72 bp | TCTGGACAGCATGGCTGGTCCTCACAGGCCTGTAGCTaGCACTCAAGAGTTCCAGGAGCCACATTCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGQHGWSSQACS*HSRVPGATFSE Trigger: CTCTGAGAATGTGGCTCCTGGAACTCTTGAGTGGCAGCTACAGGCCTGTGAGGACCAGCCATGCTGTCCAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CCA 72 bp | TCACAGGCCTGTGATTGCTGGGCCTCTCCTGGGCAGTaGCCCCCACACTTAGGAGCAGGATTATCACATACT | + |
|
Preference number: 6 (lower is better) Translates to: SQACDCWASPGQ*PPHLGAGLSHT Trigger: AGTATGTGATAATCCTGCTCCTAAGTGTGGGGGCCACTGCCCAGGAGAGGCCCAGCAATCACAGGCCTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CAA 90 bp | TGGGCAGTGGCCCCCACACTTAGGAGCAGGATTATCACATACTCGTaGACGGATCTGGGTTCCTTTGGAGCATGTGACAGAGCAAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WAVAPTLRSRIITYS*TDLGSFGACDRARP Trigger: GGGCCTTGCTCTGTCACATGCTCCAAAGGAACCCAGATCCGTCAACGAGTATGTGATAATCCTGCTCCTAAGTGTGGGGGCCACTGCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CAA 72 bp | GCCTCCCACTCCCCGTTTACAGGGCAAGGTACGGCTTaGTTACACATTTGGTTCCGAGTGGCATCACCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ASHSPFTGQGTA*LHIWFRVASPA Trigger: TGCTGGTGATGCCACTCGGAACCAAATGTGTAACAAAGCCGTACCTTGCCCTGTAAACGGGGAGTGGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CAA 72 bp | CTTGAACGTGACTGCTGGCCTGGGGTTCCTTCACAGTaGATGGACATTCTCAGCCGGCTGCAGTCACTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LERDCWPGVPSQ*MDILSRLQSLH Trigger: ATGGAGTGACTGCAGCCGGCTGAGAATGTCCATCAACTGTGAAGGAACCCCAGGCCAGCAGTCACGTTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS TCA 72 bp | TTGAACGTGACTGCTGGCCTGGGGTTCCTTCACAGTTaGTGGACATTCTCAGCCGGCTGCAGTCACTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: LNVTAGLGFLHS*WTFSAGCSHSI Trigger: AATGGAGTGACTGCAGCCGGCTGAGAATGTCCATCAACTGTGAAGGAACCCCAGGCCAGCAGTCACGTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CAA 72 bp | CAGTCTTCTACCCTGATGTCTCTCCCAAGTAGGCCTTaGCACCTGCCAGAGGACTCCTCATACTGGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QSSTLMSLPSRP*HLPEDSSYWVK Trigger: CTTCACCCAGTATGAGGAGTCCTCTGGCAGGTGCAAAGGCCTACTTGGGAGAGACATCAGGGTAGAAGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CAA 72 bp | TCCTGGAGTTTTCCAGCACATGGCTTCCCATTAAATTaGCGGCCGCCACAGCTCCTTGAACGTGACTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SWSFPAHGFPLN*RPPQLLERDCW Trigger: CCAGCAGTCACGTTCAAGGAGCTGTGGCGGCCGCAAATTTAATGGGAAGCCATGTGCTGGAAAACTCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CAA 90 bp | TTGAGACAGCAGTCTTCTACCCTGATGTCTCTCCCAAGTAGGCCTTaGCACCTGCCAGAGGACTCCTCATACTGGGTGAAGCAGAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: LRQQSSTLMSLPSRP*HLPEDSSYWVKQST Trigger: TGTGCTCTGCTTCACCCAGTATGAGGAGTCCTCTGGCAGGTGCAAAGGCCTACTTGGGAGAGACATCAGGGTAGAAGACTGCTGTCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CAA 90 bp | TGTCGAATATCCTGGAGTTTTCCAGCACATGGCTTCCCATTAAATTaGCGGCCGCCACAGCTCCTTGAACGTGACTGCTGGCCTGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: CRISWSFPAHGFPLN*RPPQLLERDCWPGV Trigger: AACCCCAGGCCAGCAGTCACGTTCAAGGAGCTGTGGCGGCCGCAAATTTAATGGGAAGCCATGTGCTGGAAAACTCCAGGATATTCGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS TCA 72 bp | CCCCCACACTTAGGAGCAGGATTATCACATACTCGTTaGCGGATCTGGGTTCCTTTGGAGCATGTGACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PPHLGAGLSHTR*RIWVPLEHVTE Trigger: CTCTGTCACATGCTCCAAAGGAACCCAGATCCGTCAACGAGTATGTGATAATCCTGCTCCTAAGTGTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS TCA 72 bp | CGTGGAGTCCCCCAGAAGGTAACATTCTTCTCACCCTaGCCTTCAACCATTGAAACTGTAGGCGGGTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: RGVPQKVTFFSP*PSTIETVGGYL Trigger: CAAGTACCCGCCTACAGTTTCAATGGTTGAAGGTCAGGGTGAGAAGAATGTTACCTTCTGGGGGACTCCACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CAA 72 bp | GCCCCCACACTTAGGAGCAGGATTATCACATACTCGTaGACGGATCTGGGTTCCTTTGGAGCATGTGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: APTLRSRIITYS*TDLGSFGACDR Trigger: TCTGTCACATGCTCCAAAGGAACCCAGATCCGTCAACGAGTATGTGATAATCCTGCTCCTAAGTGTGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS CCA 72 bp | ATAGCAGTGTCGAATATCCTGGAGTTTTCCAGCACATaGCTTCCCATTAAATTTGCGGCCGCCACAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: IAVSNILEFSST*LPIKFAAATAP Trigger: AGGAGCTGTGGCGGCCGCAAATTTAATGGGAAGCCATGTGCTGGAAAACTCCAGGATATTCGACACTGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS TCA 72 bp | GAAGGTAACATTCTTCTCACCCTGACCTTCAACCATTaGAACTGTAGGCGGGTACTTGGGGAGCAAAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: EGNILLTLTFNH*NCRRVLGEQRC Trigger: ACACCTTTGCTCCCCAAGTACCCGCCTACAGTTTCAATGGTTGAAGGTCAGGGTGAGAAGAATGTTACCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||
| CDS TCA 72 bp | GACTCCAGGTACTCCACTGTGACCATGAACCTTTCATaGTACAGTTATGGATGTTATAGCAGTGTCGAATAT | + |
|
Preference number: 6 (lower is better) Translates to: DSRYSTVTMNLS*YSYGCYSSVEY Trigger: ATATTCGACACTGCTATAACATCCATAACTGTATCATGAAAGGTTCATGGTCACAGTGGAGTACCTGGAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001156.8 |
||