Pregenerated sensors for CFLAR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026031Ensembl transcript IDs: ENSMUST00000069333.8, ENSMUST00000097722.9, ENSMUST00000114309.8, ENSMUST00000114313.8
Found 254 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CGGCAGAGCCAGAAGCAGCCAGAAGCAGCCGTAACCGCCAAGCTCTaGTCCAAGCCGCCACCCTGGATGATATACCAAGAACACCAACGG | + |
Preference number: 1 (lower is better) Translates to: RQSQKQPEAAVTAKL*SKPPPWMIYQEHQR Trigger: CCGTTGGTGTTCTTGGTATATCATCCAGGGTGGCGGCTTGGAGCAGAGCTTGGCGGTTACGGCTGCTTCTGGCTGCTTCTGGCTCTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR CCA 90 bp | GCCAACCAGGGCAAGCTCCCCCACTCACTGTTGTGTTCTTGGGGCTaGCTCTACTGTGCTGCCCAGGCAAGGTACAGACTGCTCTCCCAA | + |
Preference number: 1 (lower is better) Translates to: ANQGKLPHSLLCSWG*LYCAAQARYRLLSQ Trigger: TTGGGAGAGCAGTCTGTACCTTGCCTGGGCAGCACAGTAGAGCCAGCCCCAAGAACACAACAGTGAGTGGGGGAGCTTGCCCTGGTTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR TCA 90 bp | TGTGCATGGGTCGTGCACCCTTGCGGAGATCGGTGGACAGCTTTCTaGCGCTGGAGCACTCCTTCCTGGGGATTCAGTGTTCAGACCTGG | + |
Preference number: 1 (lower is better) Translates to: CAWVVHPCGDRWTAF*RWSTPSWGFSVQTW Trigger: CCAGGTCTGAACACTGAATCCCCAGGAAGGAGTGCTCCAGCGTCAGAAAGCTGTCCACCGATCTCCGCAAGGGTGCACGACCCATGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR CCA 90 bp | CCACATGTGCACGGGTCCTGTTCTGTCTGGAAGATGCGGCTTCCCTaGAGCCCTTCACCACCTCTGGCTCTCACAGTCTTTCTGCCTCCT | + |
Preference number: 1 (lower is better) Translates to: PHVHGSCSVWKMRLP*SPSPPLALTVFLPP Trigger: AGGAGGCAGAAAGACTGTGAGAGCCAGAGGTGGTGAAGGGCTCCAGGGAAGCCGCATCTTCCAGACAGAACAGGACCCGTGCACATGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR GCA 90 bp | TACAACCTTCAAGGAGTAGGGCTCATTCTCCTTCACCGAAGCCACTaGACAGCTGGTGAGGGTCAGGCCAGCCCTCCTGTGCTCATGGGT | + |
Preference number: 1 (lower is better) Translates to: YNLQGVGLILLHRSH*TAGEGQASPPVLMG Trigger: ACCCATGAGCACAGGAGGGCTGGCCTGACCCTCACCAGCTGTGCAGTGGCTTCGGTGAAGGAGAATGAGCCCTACTCCTTGAAGGTTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR TCA 90 bp | TACATCTCTCCCTCTGACGAGACAACCCTGAGGGTTGAACACTCCTaGTTCCCACTGTGCTCAGGTGTGAGCACAATGGCCCACAACTTC | + |
Preference number: 1 (lower is better) Translates to: YISPSDETTLRVEHS*FPLCSGVSTMAHNF Trigger: GAAGTTGTGGGCCATTGTGCTCACACCTGAGCACAGTGGGAATCAGGAGTGTTCAACCCTCAGGGTTGTCTCGTCAGAGGGAGAGATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR GCA 90 bp | ATGGAAGCCATGAGCCCGAGGAGGCTGAAGCAAGAGGAGGCTCATTaGAAGTTCAAGGCCAGCCTAGGTTACATAATGGATTCCAGGCCA | + |
Preference number: 1 (lower is better) Translates to: MEAMSPRRLKQEEAH*KFKASLGYIMDSRP Trigger: TGGCCTGGAATCCATTATGTAACCTAGGCTGGCCTTGAACTTGCAATGAGCCTCCTCTTGCTTCAGCCTCCTCGGGCTCATGGCTTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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3UTR GCA 90 bp | AGTCTGGCCTCAAACTTGTGGCAATCCTCCTGCCTCTGTAGGAACTaGCATGCCTGGCTGATTCTGTCTCTTGTTCACCACTCAGCTACC | + |
Preference number: 1 (lower is better) Translates to: SLASNLWQSSCLCRN*HAWLILSLVHHSAT Trigger: GGTAGCTGAGTGGTGAACAAGAGACAGAATCAGCCAGGCATGGCAGTTCCTACAGAGGCAGGAGGATTGCCACAAGTTTGAGGCCAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR TCA 90 bp | TTCTCCACACCAGGACCACATCCACCTCCTGACACCATCCATCACTaGCACCATCACTGTGCACATCTGCCCCAGCTAAAAGTCACTCTT | + |
Preference number: 1 (lower is better) Translates to: FSTPGPHPPPDTIHH*HHHCAHLPQLKVTL Trigger: AAGAGTGACTTTTAGCTGGGGCAGATGTGCACAGTGATGGTGTCAGTGATGGATGGTGTCAGGAGGTGGATGTGGTCCTGGTGTGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR TCA 90 bp | ATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
Preference number: 1 (lower is better) Translates to: ILLQMVVSHHVVAGI*TLDLWKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR CCA 90 bp | GAGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCTCTT | + |
Preference number: 1 (lower is better) Translates to: ESDLVTDGCEPPCGC*DLNSGPLEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR CCA 90 bp | GCTGCCCCTAAATCCCGTTATTTCCCTTCATGTCCAAGGGTAATCTaGGGCAGTTTGTTAATTCTGCTCCCTTTTCACCAGGGATGGAGC | + |
Preference number: 1 (lower is better) Translates to: AAPKSRYFPSCPRVI*GSLLILLPFHQGWS Trigger: GCTCCATCCCTGGTGAAAAGGGAGCAGAATTAACAAACTGCCCCAGATTACCCTTGGACATGAAGGGAAATAACGGGATTTAGGGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR TCA 90 bp | GTCCATTTTATGTTAGCCAATTACTCCTGGGTCTGGGGCCTGCCCTaGCGGGTAATGGATATGTCCAATAACACTCCACTGGAGAAAGCT | + |
Preference number: 1 (lower is better) Translates to: VHFMLANYSWVWGLP*RVMDMSNNTPLEKA Trigger: AGCTTTCTCCAGTGGAGTGTTATTGGACATATCCATTACCCGTCAGGGCAGGCCCCAGACCCAGGAGTAATTGGCTAACATAAAATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR GCA 90 bp | GGTACAAATAGTGCAGAGACCACCAGCTACGAATCACATTGTTCCTaGCTTCTGGGCAGAAACAGGTTATACATCTCTCCCTCTGACGAG | + |
Preference number: 1 (lower is better) Translates to: GTNSAETTSYESHCS*LLGRNRLYISPSDE Trigger: CTCGTCAGAGGGAGAGATGTATAACCTGTTTCTGCCCAGAAGGCAGGAACAATGTGATTCGTAGCTGGTGGTCTCTGCACTATTTGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR CCA 90 bp | CAGGCAAACACACAATCTCATTACACAGCTACTACATACCTAGACTaGTTCAGAACATGTGATCCTTTGGCCTCCCCCACGCTAGTACTG | + |
Preference number: 1 (lower is better) Translates to: QANTQSHYTATTYLD*FRTCDPLASPTLVL Trigger: CAGTACTAGCGTGGGGGAGGCCAAAGGATCACATGTTCTGAACCAGTCTAGGTATGTAGTAGCTGTGTAATGAGATTGTGTGTTTGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR TCA 90 bp | TCTCACAGTCTTTCTGCCTCCTCTTCAGAACAGGTCCCTAAACCCTaGGGGGAGGGGTTTGACTACTATCCTCAAATACAGATAGATTAT | + |
Preference number: 1 (lower is better) Translates to: SHSLSASSSEQVPKP*GEGFDYYPQIQIDY Trigger: ATAATCTATCTGTATTTGAGGATAGTAGTCAAACCCCTCCCCTCAGGGTTTAGGGACCTGTTCTGAAGAGGAGGCAGAAAGACTGTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR GCA 90 bp | GGAACAATATCTAAGGAGTCTCTGTTCAGAAGAGCAGACATGATATaGTACCACTTGTATAAAAGTAGACACTCTGTGGGTAGATTCTCT | + |
Preference number: 1 (lower is better) Translates to: GTISKESLFRRADMI*YHLYKSRHSVGRFS Trigger: AGAGAATCTACCCACAGAGTGTCTACTTTTATACAAGTGGTAGCATATCATGTCTGCTCTTCTGAACAGAGACTCCTTAGATATTGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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3UTR GCA 90 bp | ACATCAGTGAATCAACAGAATACAATTAAGTTCACAAATAGGCCCTaGAAACACAACCCACTGACCTCTGAAAAGCATCAAAGCAATTCA | + |
Preference number: 1 (lower is better) Translates to: TSVNQQNTIKFTNRP*KHNPLTSEKHQSNS Trigger: TGAATTGCTTTGATGCTTTTCAGAGGTCAGTGGGTTGTGTTTGCAGGGCCTATTTGTGAACTTAATTGTATTCTGTTGATTCACTGATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR-3UTR TCA 90 bp | TCCTGCAGCCTTAGTTCTACAGGACCCGCCCCTTCACAGGCTCTGGCAGTTCACGCACGGCGGCGGGAGTaGGACGTTTCCCAGGCACAG | + |
Preference number: 2 (lower is better) Translates to: SCSLSSTGPAPSQALAVHARRRE*DVSQAQ Trigger: CTGTGCCTGGGAAACGTCTCACTCCCGCCGCCGTGC...GTGAACTGCCAGAGCCTGTGAAGGGGCGGGTCCTGTAGAACTAAGGCTGCAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR CAA 90 bp | ATCCTGAGCCAACCAGGGCAAGCTCCCCCACTCACTGTTGTGTTCTaGGGGCTGGCTCTACTGTGCTGCCCAGGCAAGGTACAGACTGCT | + |
Preference number: 2 (lower is better) Translates to: ILSQPGQAPPLTVVF*GLALLCCPGKVQTA Trigger: AGCAGTCTGTACCTTGCCTGGGCAGCACAGTAGAGCCAGCCCCAAGAACACAACAGTGAGTGGGGGAGCTTGCCCTGGTTGGCTCAGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR-3UTR CCA 90 bp | TGGTCATCCCTCCTGTTCCTGATCCTGAGCCAACCAGGGCAAGCTCCCCCACTCTTGTGTTCTTGGGGCTaGCTCTACTGTGCTGCCCAG | + |
Preference number: 2 (lower is better) Translates to: WSSLLFLILSQPGQAPPLLCSWG*LYCAAQ Trigger: CTGGGCAGCACAGTAGAGCCAGCCCCAAGAACACAA...GAGTGGGGGAGCTTGCCCTGGTTGGCTCAGGATCAGGAACAGGAGGGATGACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR-3UTR CCA 90 bp | AGGACCCGCCCCTTCACAGGCTCTGGCAGTTCACAGATGATATGGATGCTGGGGTTGTGTTCTTGGGGCTaGCTCTACTGTGCTGCCCAG | + |
Preference number: 2 (lower is better) Translates to: RTRPFTGSGSSQMIWMLGLCSWG*LYCAAQ Trigger: CTGGGCAGCACAGTAGAGCCAGCCCCAAGAACACAA...CCCCAGCATCCATATCATCTGTGAACTGCCAGAGCCTGTGAAGGGGCGGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR-3UTR TCA 90 bp | TCCCCCAGTAACAGTTCCTCTAGCGAGGCCACACCTTTCAAACAGCACACCTGGCTGGCAGTTCACAGATaGTATGGATGCTGGGGTGGG | + |
Preference number: 2 (lower is better) Translates to: SPSNSSSSEATPFKQHTWLAVHR*YGCWGG Trigger: CCCACCCCAGCATCCATATCATCTGTGAACTGCCAG...CCAGGTGTGCTGTTTGAAAGGTGTGGCCTCGCTAGAGGAACTGTTACTGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR CAA 90 bp | CCCACAACTTCGTCTCCCTTTCTCAGTGTTGGGACTCTGTCTGGTTaGAACCTGTGCTGTCAGCCACATGTGCACGGGTCCTGTTCTGTC | + |
Preference number: 2 (lower is better) Translates to: PTTSSPFLSVGTLSG*NLCCQPHVHGSCSV Trigger: GACAGAACAGGACCCGTGCACATGTGGCTGACAGCACAGGTTCAAACCAGACAGAGTCCCAACACTGAGAAAGGGAGACGAAGTTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR-3UTR GCA 90 bp | TTGGCTCCTTCCCTTGACTTACGCTCTCTTCTCTATCACCACCTGCCAAGTCCCGCTGTCAGCCACATGTaGACGGGTCCTGTTCTGTCT | + |
Preference number: 2 (lower is better) Translates to: LAPSLDLRSLLYHHLPSPAVSHM*TGPVLS Trigger: AGACAGAACAGGACCCGTGCACATGTGGCTGACAGC...GGGACTTGGCAGGTGGTGATAGAGAAGAGAGCGTAAGTCAAGGGAAGGAGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR-3UTR CCA 90 bp | TGCCCTGTGTCATGGAGATCCTGCAGCCTTAGTTCTACAGGACCCGCCCCTTCATCACTGTTGTGTTCTTaGGGCTGGCTCTACTGTGCT | + |
Preference number: 2 (lower is better) Translates to: CPVSWRSCSLSSTGPAPSSLLCS*GWLYCA Trigger: AGCACAGTAGAGCCAGCCCCAAGAACACAACAGTGA...TGAAGGGGCGGGTCCTGTAGAACTAAGGCTGCAGGATCTCCATGACACAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR-3UTR CCA 90 bp | TCCCCCAGTAACAGTTCCTCTAGCGAGGCCACACCTTTCAAACAGCACACCTGGAGTTCACAGATGATATaGATGCTGGGGTGGGCCACC | + |
Preference number: 2 (lower is better) Translates to: SPSNSSSSEATPFKQHTWSSQMI*MLGWAT Trigger: GGTGGCCCACCCCAGCATCCATATCATCTGTGAACT...CCAGGTGTGCTGTTTGAAAGGTGTGGCCTCGCTAGAGGAACTGTTACTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR CAA 90 bp | AATGGAAGCCATGAGCCCGAGGAGGCTGAAGCAAGAGGAGGCTCATaGCAAGTTCAAGGCCAGCCTAGGTTACATAATGGATTCCAGGCC | + |
Preference number: 2 (lower is better) Translates to: NGSHEPEEAEARGGS*QVQGQPRLHNGFQA Trigger: GGCCTGGAATCCATTATGTAACCTAGGCTGGCCTTGAACTTGCAATGAGCCTCCTCTTGCTTCAGCCTCCTCGGGCTCATGGCTTCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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3UTR-3UTR TCA 90 bp | TCCCCCAGTAACAGTTCCTCTAGCGAGGCCACACCTTTCAAACAGCACACCTGGGACACCATCCATCACTaGCACCATCACTGTGCACAT | + |
Preference number: 2 (lower is better) Translates to: SPSNSSSSEATPFKQHTWDTIHH*HHHCAH Trigger: ATGTGCACAGTGATGGTGTCAGTGATGGATGGTGTC...CCAGGTGTGCTGTTTGAAAGGTGTGGCCTCGCTAGAGGAACTGTTACTGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR CAA 90 bp | GATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NSGPLEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR-3UTR GCA 90 bp | TATATCATGCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCCTGGCTCTACTGTGCTaGCCAGGCAAGGTACAGACT | + |
Preference number: 2 (lower is better) Translates to: YIMHPTPLMSPASLSTLCLALLC*PGKVQT Trigger: AGTCTGTACCTTGCCTGGGCAGCACAGTAGAGCCAG...GCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGCATGATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR-3UTR GCA 90 bp | ACAAGCACACAGAGTCCATTTTATGTTAGCCAATTACTCCTGGGTCTGGGGCCTCTGGCTCTACTGTGCTaGCCAGGCAAGGTACAGACT | + |
Preference number: 2 (lower is better) Translates to: TSTQSPFYVSQLLLGLGPLALLC*PGKVQT Trigger: AGTCTGTACCTTGCCTGGGCAGCACAGTAGAGCCAG...AGGCCCCAGACCCAGGAGTAATTGGCTAACATAAAATGGACTCTGTGTGCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR-3UTR GCA 90 bp | ATAGTGCAGAGACCACCAGCTACGAATCACATTGTTCCTGCCTTCTGGGCAGAATCTGGTTTGAACCTGTaGTGTCAGCCACATGTGCAC | + |
Preference number: 2 (lower is better) Translates to: IVQRPPATNHIVPAFWAESGLNL*CQPHVH Trigger: GTGCACATGTGGCTGACAGCACAGGTTCAAACCAGA...TTCTGCCCAGAAGGCAGGAACAATGTGATTCGTAGCTGGTGGTCTCTGCACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR-3UTR CCA 90 bp | ATAGTGCAGAGACCACCAGCTACGAATCACATTGTTCCTGCCTTCTGGGCAGAATCACTGTTGTGTTCTTaGGGCTGGCTCTACTGTGCT | + |
Preference number: 2 (lower is better) Translates to: IVQRPPATNHIVPAFWAESLLCS*GWLYCA Trigger: AGCACAGTAGAGCCAGCCCCAAGAACACAACAGTGA...TTCTGCCCAGAAGGCAGGAACAATGTGATTCGTAGCTGGTGGTCTCTGCACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR-3UTR GCA 90 bp | TATATCATGCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCGCCTCTGGCTTCTGGTaGACTATAAATACTGGACCC | + |
Preference number: 2 (lower is better) Translates to: YIMHPTPLMSPASLSTLCASGFW*TINTGP Trigger: GGGTCCAGTATTTATAGTGCACCAGAAGCCAGAGGC...GCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGCATGATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR-3UTR CCA 90 bp | TATATCATGCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCCTGTTCTCCACACTCTaGCAAAACATCCGACTAAGG | + |
Preference number: 2 (lower is better) Translates to: YIMHPTPLMSPASLSTLCLFSTL*QNIRLR Trigger: CCTTAGTCGGATGTTTTGCCAGAGTGTGGAGAACAG...GCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGCATGATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR-3UTR CCA 90 bp | AAAGCTTGTGTGTGTCCCTCAGTATTTCCGTGTGCCCACACATCTTCACTCATTTGTTGCCCTGTGTCATaGAGATCCTGCAGCCTTAGT | + |
Preference number: 2 (lower is better) Translates to: KACVCPSVFPCAHTSSLICCPVS*RSCSLS Trigger: ACTAAGGCTGCAGGATCTCCATGACACAGGGCAACA...AATGAGTGAAGATGTGTGGGCACACGGAAATACTGAGGGACACACACAAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR CAA 90 bp | AAATCCCGTTATTTCCCTTCATGTCCAAGGGTAATCTGGGGCAGTTaGTTAATTCTGCTCCCTTTTCACCAGGGATGGAGCATGACACAG | + |
Preference number: 2 (lower is better) Translates to: KSRYFPSCPRVIWGS*LILLPFHQGWSMTQ Trigger: CTGTGTCATGCTCCATCCCTGGTGAAAAGGGAGCAGAATTAACAAACTGCCCCAGATTACCCTTGGACATGAAGGGAAATAACGGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR-3UTR CCA 90 bp | ATAGTGCAGAGACCACCAGCTACGAATCACATTGTTCCTGCCTTCTGGGCAGAAGCCCTCCTGTGCTCATaGGTAACTATTTTTCTATCT | + |
Preference number: 2 (lower is better) Translates to: IVQRPPATNHIVPAFWAEALLCS*VTIFLS Trigger: AGATAGAAAAATAGTTACCCATGAGCACAGGAGGGC...TTCTGCCCAGAAGGCAGGAACAATGTGATTCGTAGCTGGTGGTCTCTGCACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR-3UTR CCA 90 bp | GCAATTATGCCTAGAATCTCAGCAAGCAGACAGAGGCAGAAGATAAATCCCACATGTTGCCCTGTGTCATaGAGATCCTGCAGCCTTAGT | + |
Preference number: 2 (lower is better) Translates to: AIMPRISASRQRQKINPTCCPVS*RSCSLS Trigger: ACTAAGGCTGCAGGATCTCCATGACACAGGGCAACA...TGTGGGATTTATCTTCTGCCTCTGTCTGCTTGCTGAGATTCTAGGCATAATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR-3UTR GCA 90 bp | AGCTTCCTTATCTACTCTCTGCCCTTGCAATCTGTTCCTGCCAAAGAAACAAAACAGATACCCTGTTGTTaGCCTGTGTCATGGAGATCC | + |
Preference number: 2 (lower is better) Translates to: SFLIYSLPLQSVPAKETKQIPCC*PVSWRS Trigger: GGATCTCCATGACACAGGGCAACAACAGGGTATCTG...TTTTGTTTCTTTGGCAGGAACAGATTGCAAGGGCAGAGAGTAGATAAGGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR-3UTR GCA 90 bp | GCTTCCTTATCTACTCTCTGCCCTTGCAATCTGTTCCTGCCAAAGAAACAAAAACAGATACCCTGTTGTTaGCCTGTGTCATGGAGATCC | + |
Preference number: 2 (lower is better) Translates to: ASLSTLCPCNLFLPKKQKQIPCC*PVSWRS Trigger: GGATCTCCATGACACAGGGCAACAACAGGGTATCTG...TTTTTGTTTCTTTGGCAGGAACAGATTGCAAGGGCAGAGAGTAGATAAGGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR-3UTR GCA 90 bp | TCATTGCAAGTTCAAGGCCAGCCTAGGTTACATAATGGATTCCAGGCCAGGCTGTGGGTAGATTCTCTGTaGATGGTTATAGAAGAAACT | + |
Preference number: 2 (lower is better) Translates to: SLQVQGQPRLHNGFQARLWVDSL*MVIEET Trigger: AGTTTCTTCTATAACCATGCACAGAGAATCTACCCA...CAGCCTGGCCTGGAATCCATTATGTAACCTAGGCTGGCCTTGAACTTGCAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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3UTR-3UTR CCA 90 bp | ATTTCCGTGTGCCCACACATCTTCACTCATTCACTTACATCTTTACTCAGTGCACTGTTCTCCACACTCTaGCAAAACATCCGACTAAGG | + |
Preference number: 2 (lower is better) Translates to: ISVCPHIFTHSLTSLLSALFSTL*QNIRLR Trigger: CCTTAGTCGGATGTTTTGCCAGAGTGTGGAGAACAG...TGCACTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR-3UTR CCA 90 bp | CAGTATTTCCGTGTGCCCACACATCTTCACTCATTCACTTACATCTTTACTCAGGAGGCCTCTGGCTTCTaGTGCACTATAAATACTGGA | + |
Preference number: 2 (lower is better) Translates to: QYFRVPTHLHSFTYIFTQEASGF*CTINTG Trigger: TCCAGTATTTATAGTGCACCAGAAGCCAGAGGCCTC...CTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAATACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR-3UTR CCA 90 bp | TCATTGCAAGTTCAAGGCCAGCCTAGGTTACATAATGGATTCCAGGCCAGGCTGGGTTATAGAAGAAACTaGTCTAGATTAGTCTCCTTA | + |
Preference number: 2 (lower is better) Translates to: SLQVQGQPRLHNGFQARLGYRRN*SRLVSL Trigger: TAAGGAGACTAATCTAGACCAGTTTCTTCTATAACC...CAGCCTGGCCTGGAATCCATTATGTAACCTAGGCTGGCCTTGAACTTGCAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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3UTR-3UTR CCA 90 bp | GCAATTATGCCTAGAATCTCAGCAAGCAGACAGAGGCAGAAGATAAATCCCACATGTCCAAGGGTAATCTaGGGCAGTTTGTTAATTCTG | + |
Preference number: 2 (lower is better) Translates to: AIMPRISASRQRQKINPTCPRVI*GSLLIL Trigger: CAGAATTAACAAACTGCCCCAGATTACCCTTGGACA...TGTGGGATTTATCTTCTGCCTCTGTCTGCTTGCTGAGATTCTAGGCATAATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR CAA 90 bp | GGTTTTGCAGAAAGAGAATATAAATGTGGAGCTGGGTCACAGAAATaGGTGGCCAATGTGAAAGTCCTGAAGCAATGGGTACTTAATGAG | + |
Preference number: 2 (lower is better) Translates to: GFAEREYKCGAGSQK*VANVKVLKQWVLNE Trigger: CTCATTAAGTACCCATTGCTTCAGGACTTTCACATTGGCCACCAATTTCTGTGACCCAGCTCCACATTTATATTCTCTTTCTGCAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR CAA 90 bp | TCTAAGGAGTCTCTGTTCAGAAGAGCAGACATGATATGCTACCACTaGTATAAAAGTAGACACTCTGTGGGTAGATTCTCTGTGCATGGT | + |
Preference number: 2 (lower is better) Translates to: SKESLFRRADMICYH*YKSRHSVGRFSVHG Trigger: ACCATGCACAGAGAATCTACCCACAGAGTGTCTACTTTTATACAAGTGGTAGCATATCATGTCTGCTCTTCTGAACAGAGACTCCTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
||
3UTR-3UTR CCA 90 bp | CATACAGATAGGTTCTCTGAATTAACTGAGGAAGCAGGCTCAGGGAAAACAGTGACTACATACCTAGACTaGTTCAGAACATGTGATCCT | + |
Preference number: 2 (lower is better) Translates to: HTDRFSELTEEAGSGKTVTTYLD*FRTCDP Trigger: AGGATCACATGTTCTGAACCAGTCTAGGTATGTAGT...CACTGTTTTCCCTGAGCCTGCTTCCTCAGTTAATTCAGAGAACCTATCTGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR TCA 72 bp | GGACCCGCCCCTTCACAGGCTCTGGCAGTTCACAGATaGTATGGATGCTGGGGTGGGCCACCTCAAAGCCCC | + |
Preference number: 3 (lower is better) Translates to: GPAPSQALAVHR*YGCWGGPPQSP Trigger: GGGGCTTTGAGGTGGCCCACCCCAGCATCCATATCATCTGTGAACTGCCAGAGCCTGTGAAGGGGCGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | CAAGGAGTAGGGCTCATTCTCCTTCACCGAAGCCACTaGACAGCTGGTGAGGGTCAGGCCAGCCCTCCTGTG | + |
Preference number: 3 (lower is better) Translates to: QGVGLILLHRSH*TAGEGQASPPV Trigger: CACAGGAGGGCTGGCCTGACCCTCACCAGCTGTGCAGTGGCTTCGGTGAAGGAGAATGAGCCCTACTCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR CCA 72 bp | AACCAGGGCAAGCTCCCCCACTCACTGTTGTGTTCTTaGGGCTGGCTCTACTGTGCTGCCCAGGCAAGGTAC | + |
Preference number: 3 (lower is better) Translates to: NQGKLPHSLLCS*GWLYCAAQARY Trigger: GTACCTTGCCTGGGCAGCACAGTAGAGCCAGCCCCAAGAACACAACAGTGAGTGGGGGAGCTTGCCCTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR TCA 72 bp | GTCGTGCACCCTTGCGGAGATCGGTGGACAGCTTTCTaGCGCTGGAGCACTCCTTCCTGGGGATTCAGTGTT | + |
Preference number: 3 (lower is better) Translates to: VVHPCGDRWTAF*RWSTPSWGFSV Trigger: AACACTGAATCCCCAGGAAGGAGTGCTCCAGCGTCAGAAAGCTGTCCACCGATCTCCGCAAGGGTGCACGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR CCA 72 bp | GCCGTAACCGCCAAGCTCTGCTCCAAGCCGCCACCCTaGATGATATACCAAGAACACCAACGGTCTGGGGTT | + |
Preference number: 3 (lower is better) Translates to: AVTAKLCSKPPP*MIYQEHQRSGV Trigger: AACCCCAGACCGTTGGTGTTCTTGGTATATCATCCAGGGTGGCGGCTTGGAGCAGAGCTTGGCGGTTACGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR TCA 72 bp | CCCTCTGACGAGACAACCCTGAGGGTTGAACACTCCTaGTTCCCACTGTGCTCAGGTGTGAGCACAATGGCC | + |
Preference number: 3 (lower is better) Translates to: PSDETTLRVEHS*FPLCSGVSTMA Trigger: GGCCATTGTGCTCACACCTGAGCACAGTGGGAATCAGGAGTGTTCAACCCTCAGGGTTGTCTCGTCAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | GCTGGCTCTACTGTGCTGCCCAGGCAAGGTACAGACTaGTCTCCCAAGCACTACAACCTTCAAGGAGTAGGG | + |
Preference number: 3 (lower is better) Translates to: AGSTVLPRQGTD*SPKHYNLQGVG Trigger: CCCTACTCCTTGAAGGTTGTAGTGCTTGGGAGAGCAGTCTGTACCTTGCCTGGGCAGCACAGTAGAGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | CTCACTGTTGTGTTCTTGGGGCTGGCTCTACTGTGCTaGCCAGGCAAGGTACAGACTGCTCTCCCAAGCACT | + |
Preference number: 3 (lower is better) Translates to: LTVVFLGLALLC*PGKVQTALPST Trigger: AGTGCTTGGGAGAGCAGTCTGTACCTTGCCTGGGCAGCACAGTAGAGCCAGCCCCAAGAACACAACAGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | GACCCTCACGGGGACCCTTCTCAGATACCCTGTTGTTaGCCTGTGTCATGGAGATCCTGCAGCCTTAGTTCT | + |
Preference number: 3 (lower is better) Translates to: DPHGDPSQIPCC*PVSWRSCSLSS Trigger: AGAACTAAGGCTGCAGGATCTCCATGACACAGGGCAACAACAGGGTATCTGAGAAGGGTCCCCGTGAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR-3UTR CAA 90 bp | TTGGCTCCTTCCCTTGACTTACGCTCTCTTCTCTATCACCACCTGCCAAGTCCCCCTCAAAGCCCCAAGTaGGTCATCCCTCCTGTTCCT | + |
Preference number: 3 (lower is better) Translates to: LAPSLDLRSLLYHHLPSPPQSPK*VIPPVP Trigger: AGGAACAGGAGGGATGACCAACTTGGGGCTTTGAGG...GGGACTTGGCAGGTGGTGATAGAGAAGAGAGCGTAAGTCAAGGGAAGGAGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR TCA 72 bp | AAAGCTCACTGTGCAGCTCCCGTTGGCTCCTTCCCTTaGCTTACGCTCTCTTCTCTATCACCACCTGCCAAG | + |
Preference number: 3 (lower is better) Translates to: KAHCAAPVGSFP*LTLSSLSPPAK Trigger: CTTGGCAGGTGGTGATAGAGAAGAGAGCGTAAGTCAAGGGAAGGAGCCAACGGGAGCTGCACAGTGAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR CCA 72 bp | TGGCAATCCTCCTGCCTCTGTAGGAACTGCCATGCCTaGCTGATTCTGTCTCTTGTTCACCACTCAGCTACC | + |
Preference number: 3 (lower is better) Translates to: WQSSCLCRNCHA*LILSLVHHSAT Trigger: GGTAGCTGAGTGGTGAACAAGAGACAGAATCAGCCAGGCATGGCAGTTCCTACAGAGGCAGGAGGATTGCCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR CCA 72 bp | TGGAGCACTCCTTCCTGGGGATTCAGTGTTCAGACCTaGCAGGAAACACCTTTACCACTGAGCGAGCCATCT | + |
Preference number: 3 (lower is better) Translates to: WSTPSWGFSVQT*QETPLPLSEPS Trigger: AGATGGCTCGCTCAGTGGTAAAGGTGTTTCCTGCCAGGTCTGAACACTGAATCCCCAGGAAGGAGTGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR CCA 72 bp | AACTTCGTCTCCCTTTCTCAGTGTTGGGACTCTGTCTaGTTTGAACCTGTGCTGTCAGCCACATGTGCACGG | + |
Preference number: 3 (lower is better) Translates to: NFVSLSQCWDSV*FEPVLSATCAR Trigger: CCGTGCACATGTGGCTGACAGCACAGGTTCAAACCAGACAGAGTCCCAACACTGAGAAAGGGAGACGAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | ATGAGCCCGAGGAGGCTGAAGCAAGAGGAGGCTCATTaGAAGTTCAAGGCCAGCCTAGGTTACATAATGGAT | + |
Preference number: 3 (lower is better) Translates to: MSPRRLKQEEAH*KFKASLGYIMD Trigger: ATCCATTATGTAACCTAGGCTGGCCTTGAACTTGCAATGAGCCTCCTCTTGCTTCAGCCTCCTCGGGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
||
3UTR GCA 72 bp | GAGAAAGCTGACTTCCCTTTCTCAGCAGCTATCTACTaGACAACCTCCCCTTCGTGGGGATCTCTGCAAACA | + |
Preference number: 3 (lower is better) Translates to: EKADFPFSAAIY*TTSPSWGSLQT Trigger: TGTTTGCAGAGATCCCCACGAAGGGGAGGTTGTGCAGTAGATAGCTGCTGAGAAAGGGAAGTCAGCTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | TCAAACTTGTGGCAATCCTCCTGCCTCTGTAGGAACTaGCATGCCTGGCTGATTCTGTCTCTTGTTCACCAC | + |
Preference number: 3 (lower is better) Translates to: SNLWQSSCLCRN*HAWLILSLVHH Trigger: GTGGTGAACAAGAGACAGAATCAGCCAGGCATGGCAGTTCCTACAGAGGCAGGAGGATTGCCACAAGTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR-3UTR CAA 90 bp | ACAAGCACACAGAGTCCATTTTATGTTAGCCAATTACTCCTGGGTCTGGGGCCTCAGCTACGAATCACATaGTTCCTGCCTTCTGGGCAG | + |
Preference number: 3 (lower is better) Translates to: TSTQSPFYVSQLLLGLGPQLRIT*FLPSGQ Trigger: CTGCCCAGAAGGCAGGAACAATGTGATTCGTAGCTG...AGGCCCCAGACCCAGGAGTAATTGGCTAACATAAAATGGACTCTGTGTGCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR CCA 72 bp | AGACCACCAGCTACGAATCACATTGTTCCTGCCTTCTaGGCAGAAACAGGTTATACATCTCTCCCTCTGACG | + |
Preference number: 3 (lower is better) Translates to: RPPATNHIVPAF*AETGYTSLPLT Trigger: CGTCAGAGGGAGAGATGTATAACCTGTTTCTGCCCAGAAGGCAGGAACAATGTGATTCGTAGCTGGTGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR CCA 72 bp | GGCAGTTTGTTAATTCTGCTCCCTTTTCACCAGGGATaGAGCATGACACAGTCTGGCCTCAAACTTGTGGCA | + |
Preference number: 3 (lower is better) Translates to: GSLLILLPFHQG*SMTQSGLKLVA Trigger: TGCCACAAGTTTGAGGCCAGACTGTGTCATGCTCCATCCCTGGTGAAAAGGGAGCAGAATTAACAAACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR-3UTR CAA 90 bp | TATATCATGCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCGCTGGGTCACAGAAATaGGTGGCCAATGTGAAAGTC | + |
Preference number: 3 (lower is better) Translates to: YIMHPTPLMSPASLSTLCAGSQK*VANVKV Trigger: GACTTTCACATTGGCCACCAATTTCTGTGACCCAGC...GCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGCATGATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR-3UTR CAA 90 bp | GCAATTATGCCTAGAATCTCAGCAAGCAGACAGAGGCAGAAGATAAATCCCACAACTGTGCAGCTCCCGTaGGCTCCTTCCCTTGACTTA | + |
Preference number: 3 (lower is better) Translates to: AIMPRISASRQRQKINPTTVQLP*APSLDL Trigger: TAAGTCAAGGGAAGGAGCCAACGGGAGCTGCACAGT...TGTGGGATTTATCTTCTGCCTCTGTCTGCTTGCTGAGATTCTAGGCATAATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | GATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTTGGAAGAGCAG | + |
Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNSGPLEEQ Trigger: CTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR CCA 72 bp | CAGCTGGTGAGGGTCAGGCCAGCCCTCCTGTGCTCATaGGTAACTATTTTTCTATCTAGATGTCTTACAAAG | + |
Preference number: 3 (lower is better) Translates to: QLVRVRPALLCS*VTIFLSRCLTK Trigger: CTTTGTAAGACATCTAGATAGAAAAATAGTTACCCATGAGCACAGGAGGGCTGGCCTGACCCTCACCAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR-3UTR CAA 90 bp | ATTTCCGTGTGCCCACACATCTTCACTCATTCACTTACATCTTTACTCAGTGCACTCACTGTTGTGTTCTaGGGGCTGGCTCTACTGTGC | + |
Preference number: 3 (lower is better) Translates to: ISVCPHIFTHSLTSLLSALTVVF*GLALLC Trigger: GCACAGTAGAGCCAGCCCCAAGAACACAACAGTGAG...TGCACTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR-3UTR CAA 90 bp | AGCTTCCTTATCTACTCTCTGCCCTTGCAATCTGTTCCTGCCAAAGAAACAAAACCTCAAAGCCCCAAGTaGGTCATCCCTCCTGTTCCT | + |
Preference number: 3 (lower is better) Translates to: SFLIYSLPLQSVPAKETKPQSPK*VIPPVP Trigger: AGGAACAGGAGGGATGACCAACTTGGGGCTTTGAGG...TTTTGTTTCTTTGGCAGGAACAGATTGCAAGGGCAGAGAGTAGATAAGGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | CTTCCCTTGACTTACGCTCTCTTCTCTATCACCACCTaGCAAGTCCCATCAGCTTTTCAAAGTTTGACTCAG | + |
Preference number: 3 (lower is better) Translates to: LPLTYALFSITT*QVPSAFQSLTQ Trigger: CTGAGTCAAACTTTGAAAAGCTGATGGGACTTGGCAGGTGGTGATAGAGAAGAGAGCGTAAGTCAAGGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | ACACATCTTCACTCATTCACTTACATCTTTACTCAGTaGAATGGGTCATTGTCTGATCCGAGGCCTCTGGCT | + |
Preference number: 3 (lower is better) Translates to: THLHSFTYIFTQ*NGSLSDPRPLA Trigger: AGCCAGAGGCCTCGGATCAGACAATGACCCATTGCACTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | ACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTaGCCTTGCAATCTGTTCCTGCCAAAGAAACAAAAA | + |
Preference number: 3 (lower is better) Translates to: TPLMSPASLSTL*PCNLFLPKKQK Trigger: TTTTTGTTTCTTTGGCAGGAACAGATTGCAAGGGCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR TCA 72 bp | GATCCAAGAGAAGCAAGAAGAAAGTCTGTCTCAACGTaGCTCAGTGGACAGTTTTTGTCCAAACTTCTGGAG | + |
Preference number: 3 (lower is better) Translates to: DPREARRKSVST*LSGQFLSKLLE Trigger: CTCCAGAAGTTTGGACAAAAACTGTCCACTGAGTCACGTTGAGACAGACTTTCTTCTTGCTTCTCTTGGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR CCA 72 bp | GCCAGCCTAGGTTACATAATGGATTCCAGGCCAGGCTaGATTACAGGTAAGTTCTTGTCTCAAAAGAAGATA | + |
Preference number: 3 (lower is better) Translates to: ASLGYIMDSRPG*ITGKFLSQKKI Trigger: TATCTTCTTTTGAGACAAGAACTTACCTGTAATCCAGCCTGGCCTGGAATCCATTATGTAACCTAGGCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
||
3UTR CCA 72 bp | AAATCCCGTTATTTCCCTTCATGTCCAAGGGTAATCTaGGGCAGTTTGTTAATTCTGCTCCCTTTTCACCAG | + |
Preference number: 3 (lower is better) Translates to: KSRYFPSCPRVI*GSLLILLPFHQ Trigger: CTGGTGAAAAGGGAGCAGAATTAACAAACTGCCCCAGATTACCCTTGGACATGAAGGGAAATAACGGGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR TCA 72 bp | ATAAATACAGAGCAAACTGGAAATGGTATAAGCCTTTaGAACCTCAAAGCCTGTCCCTGTCCCCCAGTAACA | + |
Preference number: 3 (lower is better) Translates to: INTEQTGNGISL*NLKACPCPPVT Trigger: TGTTACTGGGGGACAGGGACAGGCTTTGAGGTTTCAAAGGCTTATACCATTTCCAGTTTGCTCTGTATTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR TCA 72 bp | TTAAGTTCACAAATAGGCCCTGCAAACACAACCCACTaGCCTCTGAAAAGCATCAAAGCAATTCACTGGAAA | + |
Preference number: 3 (lower is better) Translates to: LSSQIGPANTTH*PLKSIKAIHWK Trigger: TTTCCAGTGAATTGCTTTGATGCTTTTCAGAGGTCAGTGGGTTGTGTTTGCAGGGCCTATTTGTGAACTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | CATAAAAGCTTGTGTGTGTCCCTCAGTATTTCCGTGTaGCCACACATCTTCACTCATTCACTTACATCTTTA | + |
Preference number: 3 (lower is better) Translates to: HKSLCVSLSISV*PHIFTHSLTSL Trigger: TAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAATACTGAGGGACACACACAAGCTTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | TCTAAGGAGTCTCTGTTCAGAAGAGCAGACATGATATaGTACCACTTGTATAAAAGTAGACACTCTGTGGGT | + |
Preference number: 3 (lower is better) Translates to: SKESLFRRADMI*YHLYKSRHSVG Trigger: ACCCACAGAGTGTCTACTTTTATACAAGTGGTAGCATATCATGTCTGCTCTTCTGAACAGAGACTCCTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
||
3UTR TCA 72 bp | CCTGTGTGTACAGAAAAGCTTAGGAGATGGCTATACTaGAACTCTTGTAGAGTACAAGCAACATCTTGCATA | + |
Preference number: 3 (lower is better) Translates to: PVCTEKLRRWLY*NSCRVQATSCI Trigger: TATGCAAGATGTTGCTTGTACTCTACAAGAGTTTCAGTATAGCCATCTCCTAAGCTTTTCTGTACACACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR TCA 72 bp | CAATATCTAAGGAGTCTCTGTTCAGAAGAGCAGACATaGTATGCTACCACTTGTATAAAAGTAGACACTCTG | + |
Preference number: 3 (lower is better) Translates to: QYLRSLCSEEQT*YATTCIKVDTL Trigger: CAGAGTGTCTACTTTTATACAAGTGGTAGCATATCATGTCTGCTCTTCTGAACAGAGACTCCTTAGATATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
||
3UTR TCA 72 bp | AGATGTGCAATATGCAAACTATTACAGTGTCTAAAATaGCCCTCATCCTGGCAATGTTTTCTCTGTGTGTGT | + |
Preference number: 3 (lower is better) Translates to: RCAICKLLQCLK*PSSWQCFLCVC Trigger: ACACACACAGAGAAAACATTGCCAGGATGAGGGTCATTTTAGACACTGTAATAGTTTGCATATTGCACATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR GCA 72 bp | AATCAACAGAATACAATTAAGTTCACAAATAGGCCCTaGAAACACAACCCACTGACCTCTGAAAAGCATCAA | + |
Preference number: 3 (lower is better) Translates to: NQQNTIKFTNRP*KHNPLTSEKHQ Trigger: TTGATGCTTTTCAGAGGTCAGTGGGTTGTGTTTGCAGGGCCTATTTGTGAACTTAATTGTATTCTGTTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR CCA 72 bp | AATAGTATATTCAATAAATACAGAGCAAACTGGAAATaGTATAAGCCTTTGAAACCTCAAAGCCTGTCCCTG | + |
Preference number: 3 (lower is better) Translates to: NSIFNKYRANWK*YKPLKPQSLSL Trigger: CAGGGACAGGCTTTGAGGTTTCAAAGGCTTATACCATTTCCAGTTTGCTCTGTATTTATTGAATATACTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
CDS-3UTR TCA 90 bp | TGGTCATCCCTCCTGTTCCTGATCCTGAGCCAACCAGGGCAAGCTCCCCCACTCGCTTTGGCTTCCCTCTaGGAGAAGGGCACGTGTCCC | + |
Preference number: 4 (lower is better) Translates to: WSSLLFLILSQPGQAPPLALASL*EKGTCP Trigger: GGGACACGTGCCCTTCTCTCAGAGGGAAGCCAAAGC...GAGTGGGGGAGCTTGCCCTGGTTGGCTCAGGATCAGGAACAGGAGGGATGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
CDS-3UTR GCA 90 bp | AGCCATGAGCCCGAGGAGGCTGAAGCAAGAGGAGGCTCATTGCAAGTTCAAGGCCCAGGTGAGGGTTTCTaGGCAGGTGGTCCTCCACGG | + |
Preference number: 4 (lower is better) Translates to: SHEPEEAEARGGSLQVQGPGEGF*AGGPPR Trigger: CCGTGGAGGACCACCTGCGCAGAAACCCTCACCTGG...GCCTTGAACTTGCAATGAGCCTCCTCTTGCTTCAGCCTCCTCGGGCTCATGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
||
3UTR CAA 72 bp | CAACCAGGGCAAGCTCCCCCACTCACTGTTGTGTTCTaGGGGCTGGCTCTACTGTGCTGCCCAGGCAAGGTA | + |
Preference number: 4 (lower is better) Translates to: QPGQAPPLTVVF*GLALLCCPGKV Trigger: TACCTTGCCTGGGCAGCACAGTAGAGCCAGCCCCAAGAACACAACAGTGAGTGGGGGAGCTTGCCCTGGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
CDS-3UTR GCA 90 bp | GCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCCCTTGCAACCAGGTGAGGGTTTCTaGGCAGGTGGTCCTCCACGG | + |
Preference number: 4 (lower is better) Translates to: APNPTHVSSFLIYSLPLQPGEGF*AGGPPR Trigger: CCGTGGAGGACCACCTGCGCAGAAACCCTCACCTGG...TTGCAAGGGCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
CDS-3UTR GCA 90 bp | CAGCTGGTGAGGGTCAGGCCAGCCCTCCTGTGCTCATGGGTAACTATTTTTCTAGGGCGTCTCCTGCCTTaGTTCAGCTGCTGGGAGAGC | + |
Preference number: 4 (lower is better) Translates to: QLVRVRPALLCSWVTIFLGRLLP*FSCWES Trigger: GCTCTCCCAGCAGCTGAAGCAAGGCAGGAGACGCCC...TAGAAAAATAGTTACCCATGAGCACAGGAGGGCTGGCCTGACCCTCACCAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR CAA 72 bp | GCAGGGAGGGCAGACTGCCGATTGACTGACATGAACTaGAGTCTGAGGGAGGCGGTGTGGCTTGGTGGTACA | + |
Preference number: 4 (lower is better) Translates to: AGRADCRLTDMN*SLREAVWLGGT Trigger: TGTACCACCAAGCCACACCGCCTCCCTCAGACTCAAGTTCATGTCAGTCAATCGGCAGTCTGCCCTCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
CDS-3UTR GCA 90 bp | ACGGGTCCTGTTCTGTCTGGAAGATGCGGCTTCCCTGGAGCCCTTCACCACCTCAGTGAACTTGATCTCTaGCCATCATGCTTTGGGAGC | + |
Preference number: 4 (lower is better) Translates to: TGPVLSGRCGFPGALHHLSELDL*PSCFGS Trigger: GCTCCCAAAGCATGATGGGCAGAGATCAAGTTCACT...GAGGTGGTGAAGGGCTCCAGGGAAGCCGCATCTTCCAGACAGAACAGGACCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
CDS-3UTR GCA 90 bp | TGTTCTTGGGGCTGGCTCTACTGTGCTGCCCAGGCAAGGTACAGACTGCTCTCCCATCTACCTCCAGGCTaGTATCTTCCAACTGGCTAC | + |
Preference number: 4 (lower is better) Translates to: CSWGWLYCAAQARYRLLSHLPPG*YLPTGY Trigger: GTAGCCAGTTGGAAGATAGCAGCCTGGAGGTAGATG...GGAGAGCAGTCTGTACCTTGCCTGGGCAGCACAGTAGAGCCAGCCCCAAGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
CDS-3UTR CCA 90 bp | GCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCCCTTGCAAGGGTTTCTGCGCAGGTaGTCCTCCACGGTTGCTTTG | + |
Preference number: 4 (lower is better) Translates to: APNPTHVSSFLIYSLPLQGFLRR*SSTVAL Trigger: CAAAGCAACCGTGGAGGACCACCTGCGCAGAAACCC...TTGCAAGGGCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | TGTTCTTGGGGCTGGCTCTACTGTGCTGCCCAGGCAAGGTACAGACTGCTCTCCATCTTGCTCCTTGGCTaGACTGGGTGTACTTCTGGA | + |
Preference number: 4 (lower is better) Translates to: CSWGWLYCAAQARYRLLSILLLG*TGCTSG Trigger: TCCAGAAGTACACCCAGTCCAGCCAAGGAGCAAGAT...GGAGAGCAGTCTGTACCTTGCCTGGGCAGCACAGTAGAGCCAGCCCCAAGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
CDS-3UTR CCA 90 bp | ACGGGTCCTGTTCTGTCTGGAAGATGCGGCTTCCCTGGAGCCCTTCACCACCTCCTCCTGATTCCTGGATaGATGTCTTCACCAGTGTTC | + |
Preference number: 4 (lower is better) Translates to: TGPVLSGRCGFPGALHHLLLIPG*MSSPVF Trigger: GAACACTGGTGAAGACATCCATCCAGGAATCAGGAG...GAGGTGGTGAAGGGCTCCAGGGAAGCCGCATCTTCCAGACAGAACAGGACCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
3UTR CAA 72 bp | TCGTCTCCCTTTCTCAGTGTTGGGACTCTGTCTGGTTaGAACCTGTGCTGTCAGCCACATGTGCACGGGTCC | + |
Preference number: 4 (lower is better) Translates to: SSPFLSVGTLSG*NLCCQPHVHGS Trigger: GGACCCGTGCACATGTGGCTGACAGCACAGGTTCAAACCAGACAGAGTCCCAACACTGAGAAAGGGAGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
CDS-3UTR GCA 90 bp | TCCTGCAGCCTTAGTTCTACAGGACCCGCCCCTTCACAGGCTCTGGCAGTTCACAGATTCCTAGGGGCTTaGTCTGCATCCTGTAAGTCT | + |
Preference number: 4 (lower is better) Translates to: SCSLSSTGPAPSQALAVHRFLGA*SASCKS Trigger: AGACTTACAGGATGCAGAGCAAGCCCCTAGGAATCT...GTGAACTGCCAGAGCCTGTGAAGGGGCGGGTCCTGTAGAACTAAGGCTGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
CDS-3UTR GCA 90 bp | CAGCTGGTGAGGGTCAGGCCAGCCCTCCTGTGCTCATGGGTAACTATTTTTCTACTTCTGGGTGAGTTGTaGAGTGTCTGGGTTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: QLVRVRPALLCSWVTIFLLLGEL*SVWVAG Trigger: CCCTGCAACCCAGACACTGCACAACTCACCCAGAAG...TAGAAAAATAGTTACCCATGAGCACAGGAGGGCTGGCCTGACCCTCACCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
CDS-3UTR CCA 90 bp | TCTTGGGGCTGGCTCTACTGTGCTGCCCAGGCAAGGTACAGACTGCTCTCCCAAAGAAACTCTTGTCCTTaGCTATCTTGCCTCTGCCTG | + |
Preference number: 4 (lower is better) Translates to: SWGWLYCAAQARYRLLSQRNSCP*LSCLCL Trigger: CAGGCAGAGGCAAGATAGCCAAGGACAAGAGTTTCT...TTGGGAGAGCAGTCTGTACCTTGCCTGGGCAGCACAGTAGAGCCAGCCCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
CDS-3UTR TCA 90 bp | GCAGCCTTAGTTCTACAGGACCCGCCCCTTCACAGGCTCTGGCAGTTCACAGATTCTTCAAGATCCTCTTaGGAAGGTCAAACCGCCTCA | + |
Preference number: 4 (lower is better) Translates to: AALVLQDPPLHRLWQFTDSSRSS*EGQTAS Trigger: TGAGGCGGTTTGACCTTCTCAAGAGGATCTTGAAGA...ATCTGTGAACTGCCAGAGCCTGTGAAGGGGCGGGTCCTGTAGAACTAAGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | AGCCATGAGCCCGAGGAGGCTGAAGCAAGAGGAGGCTCATTGCAAGTTCAAGGCTCTTCAAGATCCTCTTaGGAAGGTCAAACCGCCTCA | + |
Preference number: 4 (lower is better) Translates to: SHEPEEAEARGGSLQVQGSSRSS*EGQTAS Trigger: TGAGGCGGTTTGACCTTCTCAAGAGGATCTTGAAGA...GCCTTGAACTTGCAATGAGCCTCCTCTTGCTTCAGCCTCCTCGGGCTCATGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
||
CDS-3UTR TCA 90 bp | TGGTCATCCCTCCTGTTCCTGATCCTGAGCCAACCAGGGCAAGCTCCCCCACTCCCCATTCTGGAGCCTTaGGTTATACTTGATACTCAA | + |
Preference number: 4 (lower is better) Translates to: WSSLLFLILSQPGQAPPLPILEP*VILDTQ Trigger: TTGAGTATCAAGTATAACTCAAGGCTCCAGAATGGG...GAGTGGGGGAGCTTGCCCTGGTTGGCTCAGGATCAGGAACAGGAGGGATGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
CDS-3UTR TCA 90 bp | ACAAGCACACAGAGTCCATTTTATGTTAGCCAATTACTCCTGGGTCTGGGGCCTGCTTTGGCTTCCCTCTaGGAGAAGGGCACGTGTCCC | + |
Preference number: 4 (lower is better) Translates to: TSTQSPFYVSQLLLGLGPALASL*EKGTCP Trigger: GGGACACGTGCCCTTCTCTCAGAGGGAAGCCAAAGC...AGGCCCCAGACCCAGGAGTAATTGGCTAACATAAAATGGACTCTGTGTGCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR GCA 90 bp | AAAGCTTGTGTGTGTCCCTCAGTATTTCCGTGTGCCCACACATCTTCACTCATTGGGCGTCTCCTGCCTTaGTTCAGCTGCTGGGAGAGC | + |
Preference number: 4 (lower is better) Translates to: KACVCPSVFPCAHTSSLIGRLLP*FSCWES Trigger: GCTCTCCCAGCAGCTGAAGCAAGGCAGGAGACGCCC...AATGAGTGAAGATGTGTGGGCACACGGAAATACTGAGGGACACACACAAGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR GCA 90 bp | AAAGCTTGTGTGTGTCCCTCAGTATTTCCGTGTGCCCACACATCTTCACTCATTCGAGTGGGCGTCTCCTaGCTTGCTTCAGCTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: KACVCPSVFPCAHTSSLIRVGVS*LASAAG Trigger: CCCAGCAGCTGAAGCAAGGCAGGAGACGCCCACTCG...AATGAGTGAAGATGTGTGGGCACACGGAAATACTGAGGGACACACACAAGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | TCATTGCAAGTTCAAGGCCAGCCTAGGTTACATAATGGATTCCAGGCCAGGCTGGGGTTTCTGCGCAGGTaGTCCTCCACGGTTGCTTTG | + |
Preference number: 4 (lower is better) Translates to: SLQVQGQPRLHNGFQARLGFLRR*SSTVAL Trigger: CAAAGCAACCGTGGAGGACCACCTGCGCAGAAACCC...CAGCCTGGCCTGGAATCCATTATGTAACCTAGGCTGGCCTTGAACTTGCAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS-3UTR CCA 90 bp | TGGTCATCCCTCCTGTTCCTGATCCTGAGCCAACCAGGGCAAGCTCCCCCACTCTTACTTCGCCCATTCTaGAGCCTTGAGTTATACTTG | + |
Preference number: 4 (lower is better) Translates to: WSSLLFLILSQPGQAPPLLLRPF*SLELYL Trigger: CAAGTATAACTCAAGGCTCCAGAATGGGCGAAGTAA...GAGTGGGGGAGCTTGCCCTGGTTGGCTCAGGATCAGGAACAGGAGGGATGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | TGCCCTGTGTCATGGAGATCCTGCAGCCTTAGTTCTACAGGACCCGCCCCTTCACTCCTGATTCCTGGATaGATGTCTTCACCAGTGTTC | + |
Preference number: 4 (lower is better) Translates to: CPVSWRSCSLSSTGPAPSLLIPG*MSSPVF Trigger: GAACACTGGTGAAGACATCCATCCAGGAATCAGGAG...TGAAGGGGCGGGTCCTGTAGAACTAAGGCTGCAGGATCTCCATGACACAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | CAGCTGGTGAGGGTCAGGCCAGCCCTCCTGTGCTCATGGGTAACTATTTTTCTAACACAGAGGATGAGCTaGAGGGCTTCTCCAAGTGAG | + |
Preference number: 4 (lower is better) Translates to: QLVRVRPALLCSWVTIFLTQRMS*RASPSE Trigger: CTCACTTGGAGAAGCCCTCCAGCTCATCCTCTGTGT...TAGAAAAATAGTTACCCATGAGCACAGGAGGGCTGGCCTGACCCTCACCAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR CAA 72 bp | CATGAGCCCGAGGAGGCTGAAGCAAGAGGAGGCTCATaGCAAGTTCAAGGCCAGCCTAGGTTACATAATGGA | + |
Preference number: 4 (lower is better) Translates to: HEPEEAEARGGS*QVQGQPRLHNG Trigger: TCCATTATGTAACCTAGGCTGGCCTTGAACTTGCAATGAGCCTCCTCTTGCTTCAGCCTCCTCGGGCTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS-3UTR TCA 90 bp | AGCCATGAGCCCGAGGAGGCTGAAGCAAGAGGAGGCTCATTGCAAGTTCAAGGCGAGGATACATCGTTCTaGTCTAAGCTCTCACCAATC | + |
Preference number: 4 (lower is better) Translates to: SHEPEEAEARGGSLQVQGEDTSF*SKLSPI Trigger: GATTGGTGAGAGCTTAGATCAGAACGATGTATCCTC...GCCTTGAACTTGCAATGAGCCTCCTCTTGCTTCAGCCTCCTCGGGCTCATGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS-3UTR CCA 90 bp | TGTTCTTGGGGCTGGCTCTACTGTGCTGCCCAGGCAAGGTACAGACTGCTCTCCTTACTTCGCCCATTCTaGAGCCTTGAGTTATACTTG | + |
Preference number: 4 (lower is better) Translates to: CSWGWLYCAAQARYRLLSLLRPF*SLELYL Trigger: CAAGTATAACTCAAGGCTCCAGAATGGGCGAAGTAA...GGAGAGCAGTCTGTACCTTGCCTGGGCAGCACAGTAGAGCCAGCCCCAAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | TTACGGCTCATGCCTGTGCACAGGAGAACCCTAGGCCAGGACTCACGGCAGAGCGTATTCCACAAATCTTaGCTCTTTACTTCGCCCATT | + |
Preference number: 4 (lower is better) Translates to: LRLMPVHRRTLGQDSRQSVFHKS*LFTSPI Trigger: AATGGGCGAAGTAAAGAGCCAAGATTTGTGGAATAC...GCTCTGCCGTGAGTCCTGGCCTAGGGTTCTCCTGTGCACAGGCATGAGCCGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR GCA 90 bp | CAGTATTTCCGTGTGCCCACACATCTTCACTCATTCACTTACATCTTTACTCAGCCAGGTGAGGGTTTCTaGGCAGGTGGTCCTCCACGG | + |
Preference number: 4 (lower is better) Translates to: QYFRVPTHLHSFTYIFTQPGEGF*AGGPPR Trigger: CCGTGGAGGACCACCTGCGCAGAAACCCTCACCTGG...CTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAATACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR GCA 90 bp | GCTTCCTTATCTACTCTCTGCCCTTGCAATCTGTTCCTGCCAAAGAAACAAAAACGAGTGGGCGTCTCCTaGCTTGCTTCAGCTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: ASLSTLCPCNLFLPKKQKRVGVS*LASAAG Trigger: CCCAGCAGCTGAAGCAAGGCAGGAGACGCCCACTCG...TTTTTGTTTCTTTGGCAGGAACAGATTGCAAGGGCAGAGAGTAGATAAGGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR CAA 72 bp | CTGGCAGGAAACACCTTTACCACTGAGCGAGCCATCTaGCTGCCCCTAAATCCCGTTATTTCCCTTCATGTC | + |
Preference number: 4 (lower is better) Translates to: LAGNTFTTERAI*LPLNPVISLHV Trigger: GACATGAAGGGAAATAACGGGATTTAGGGGCAGCAAGATGGCTCGCTCAGTGGTAAAGGTGTTTCCTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | TGCCCTGTGTCATGGAGATCCTGCAGCCTTAGTTCTACAGGACCCGCCCCTTCAGAAGTGAAGGTCTCTTaGAGATATTTTGTGTCGTTG | + |
Preference number: 4 (lower is better) Translates to: CPVSWRSCSLSSTGPAPSEVKVS*RYFVSL Trigger: CAACGACACAAAATATCTTCAAGAGACCTTCACTTC...TGAAGGGGCGGGTCCTGTAGAACTAAGGCTGCAGGATCTCCATGACACAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | TTGGCTCCTTCCCTTGACTTACGCTCTCTTCTCTATCACCACCTGCCAAGTCCCAACATGTTCTTGACATaGTCCAAGGAGAACCCTGAG | + |
Preference number: 4 (lower is better) Translates to: LAPSLDLRSLLYHHLPSPNMFLT*SKENPE Trigger: CTCAGGGTTCTCCTTGGATCATGTCAAGAACATGTT...GGGACTTGGCAGGTGGTGATAGAGAAGAGAGCGTAAGTCAAGGGAAGGAGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | CAGCTGGTGAGGGTCAGGCCAGCCCTCCTGTGCTCATGGGTAACTATTTTTCTATGCCAATACAATCAATaGTCAAGCAGATTCCTAGGG | + |
Preference number: 4 (lower is better) Translates to: QLVRVRPALLCSWVTIFLCQYNQ*SSRFLG Trigger: CCCTAGGAATCTGCTTGATCATTGATTGTATTGGCA...TAGAAAAATAGTTACCCATGAGCACAGGAGGGCTGGCCTGACCCTCACCAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | ATTTCCGTGTGCCCACACATCTTCACTCATTCACTTACATCTTTACTCAGTGCAGGGTTTCTGCGCAGGTaGTCCTCCACGGTTGCTTTG | + |
Preference number: 4 (lower is better) Translates to: ISVCPHIFTHSLTSLLSAGFLRR*SSTVAL Trigger: CAAAGCAACCGTGGAGGACCACCTGCGCAGAAACCC...TGCACTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | TTGGCTCCTTCCCTTGACTTACGCTCTCTTCTCTATCACCACCTGCCAAGTCCCGACTGGGTGTACTTCTaGATCTTTGTGTTCAAGTCT | + |
Preference number: 4 (lower is better) Translates to: LAPSLDLRSLLYHHLPSPDWVYF*IFVFKS Trigger: AGACTTGAACACAAAGATCCAGAAGTACACCCAGTC...GGGACTTGGCAGGTGGTGATAGAGAAGAGAGCGTAAGTCAAGGGAAGGAGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | GCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCCCTTGCAAAAAGATATCAGCTTCTaGGTGAGTTGTGCAGTGTCT | + |
Preference number: 4 (lower is better) Translates to: APNPTHVSSFLIYSLPLQKDISF*VSCAVS Trigger: AGACACTGCACAACTCACCCAGAAGCTGATATCTTT...TTGCAAGGGCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | CAGCTGGTGAGGGTCAGGCCAGCCCTCCTGTGCTCATGGGTAACTATTTTTCTAGAAGTGAAGGTCTCTTaGAGATATTTTGTGTCGTTG | + |
Preference number: 4 (lower is better) Translates to: QLVRVRPALLCSWVTIFLEVKVS*RYFVSL Trigger: CAACGACACAAAATATCTTCAAGAGACCTTCACTTC...TAGAAAAATAGTTACCCATGAGCACAGGAGGGCTGGCCTGACCCTCACCAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | ACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCCCTTGCAATCTATCGGCGAACAATCTaGGTTATGTCATGTGACTTG | + |
Preference number: 4 (lower is better) Translates to: TQPHSCLQLPYLLSALAIYRRTI*VMSCDL Trigger: CAAGTCACATGACATAACCCAGATTGTTCGCCGATA...GATTGCAAGGGCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | ACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCCCTTGCAATCAAAGATATCAGCTTCTaGGTGAGTTGTGCAGTGTCT | + |
Preference number: 4 (lower is better) Translates to: TQPHSCLQLPYLLSALAIKDISF*VSCAVS Trigger: AGACACTGCACAACTCACCCAGAAGCTGATATCTTT...GATTGCAAGGGCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | TCATTGCAAGTTCAAGGCCAGCCTAGGTTACATAATGGATTCCAGGCCAGGCTGGAGAGTATTCATATTTaGTCTTGCTCCTTGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: SLQVQGQPRLHNGFQARLESIHI*SCSLAG Trigger: TCCAGCCAAGGAGCAAGATCAAATATGAATACTCTC...CAGCCTGGCCTGGAATCCATTATGTAACCTAGGCTGGCCTTGAACTTGCAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS-3UTR TCA 90 bp | TATATCATGCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCAACATGTTCTTGACATaGTCCAAGGAGAACCCTGAG | + |
Preference number: 4 (lower is better) Translates to: YIMHPTPLMSPASLSTLCNMFLT*SKENPE Trigger: CTCAGGGTTCTCCTTGGATCATGTCAAGAACATGTT...GCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGCATGATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR GCA 90 bp | TATGTCTTACTGTTCTCCACACTCTGGCAAAACATCCGACTAAGGAATGTAAGTCTTCTGGGTGAGTTGTaGAGTGTCTGGGTTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: YVLLFSTLWQNIRLRNVSLLGEL*SVWVAG Trigger: CCCTGCAACCCAGACACTGCACAACTCACCCAGAAG...ACTTACATTCCTTAGTCGGATGTTTTGCCAGAGTGTGGAGAACAGTAAGACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR GCA 90 bp | CATACAGATAGGTTCTCTGAATTAACTGAGGAAGCAGGCTCAGGGAAAACAGTGTGCTGGGAGAGCTTCTaGAGATACACAGAGGATGAG | + |
Preference number: 4 (lower is better) Translates to: HTDRFSELTEEAGSGKTVCWESF*RYTEDE Trigger: CTCATCCTCTGTGTATCTGCAGAAGCTCTCCCAGCA...CACTGTTTTCCCTGAGCCTGCTTCCTCAGTTAATTCAGAGAACCTATCTGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | TCATTGCAAGTTCAAGGCCAGCCTAGGTTACATAATGGATTCCAGGCCAGGCTGGACTGGGTGTACTTCTaGATCTTTGTGTTCAAGTCT | + |
Preference number: 4 (lower is better) Translates to: SLQVQGQPRLHNGFQARLDWVYF*IFVFKS Trigger: AGACTTGAACACAAAGATCCAGAAGTACACCCAGTC...CAGCCTGGCCTGGAATCCATTATGTAACCTAGGCTGGCCTTGAACTTGCAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS-3UTR CCA 90 bp | ATTTCCGTGTGCCCACACATCTTCACTCATTCACTTACATCTTTACTCAGTGCAACACAGAGGATGAGCTaGAGGGCTTCTCCAAGTGAG | + |
Preference number: 4 (lower is better) Translates to: ISVCPHIFTHSLTSLLSATQRMS*RASPSE Trigger: CTCACTTGGAGAAGCCCTCCAGCTCATCCTCTGTGT...TGCACTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
||
3UTR CAA 72 bp | GTGGGGATCTCTGCAAACACCTTAACCAGCAGGGTGTaGATCCAAGAGAAGCAAGAAGAAAGTCTGTCTCAA | + |
Preference number: 4 (lower is better) Translates to: VGISANTLTSRV*IQEKQEESLSQ Trigger: TTGAGACAGACTTTCTTCTTGCTTCTCTTGGATCAACACCCTGCTGGTTAAGGTGTTTGCAGAGATCCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR CAA 72 bp | TATTTCCCTTCATGTCCAAGGGTAATCTGGGGCAGTTaGTTAATTCTGCTCCCTTTTCACCAGGGATGGAGC | + |
Preference number: 4 (lower is better) Translates to: YFPSCPRVIWGS*LILLPFHQGWS Trigger: GCTCCATCCCTGGTGAAAAGGGAGCAGAATTAACAAACTGCCCCAGATTACCCTTGGACATGAAGGGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | CATACAGATAGGTTCTCTGAATTAACTGAGGAAGCAGGCTCAGGGAAAACAGTGTCTTCAAGATCCTCTTaGGAAGGTCAAACCGCCTCA | + |
Preference number: 4 (lower is better) Translates to: HTDRFSELTEEAGSGKTVSSRSS*EGQTAS Trigger: TGAGGCGGTTTGACCTTCTCAAGAGGATCTTGAAGA...CACTGTTTTCCCTGAGCCTGCTTCCTCAGTTAATTCAGAGAACCTATCTGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | ACAAGCACACAGAGTCCATTTTATGTTAGCCAATTACTCCTGGGTCTGGGGCCTGAGAGTATTCATATTTaGTCTTGCTCCTTGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: TSTQSPFYVSQLLLGLGPESIHI*SCSLAG Trigger: TCCAGCCAAGGAGCAAGATCAAATATGAATACTCTC...AGGCCCCAGACCCAGGAGTAATTGGCTAACATAAAATGGACTCTGTGTGCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
||
CDS-3UTR TCA 90 bp | AACTGGAAATGGTATAAGCCTTTGAAACCTCAAAGCCTGTCCCTGTCCCCCAGTCCCATTCTGGAGCCTTaGGTTATACTTGATACTCAA | + |
Preference number: 4 (lower is better) Translates to: NWKWYKPLKPQSLSLSPSPILEP*VILDTQ Trigger: TTGAGTATCAAGTATAACTCAAGGCTCCAGAATGGG...ACTGGGGGACAGGGACAGGCTTTGAGGTTTCAAAGGCTTATACCATTTCCAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | AGCTTCCTTATCTACTCTCTGCCCTTGCAATCTGTTCCTGCCAAAGAAACAAAAATCTTGCTCCTTGGCTaGACTGGGTGTACTTCTGGA | + |
Preference number: 4 (lower is better) Translates to: SFLIYSLPLQSVPAKETKILLLG*TGCTSG Trigger: TCCAGAAGTACACCCAGTCCAGCCAAGGAGCAAGAT...TTTTGTTTCTTTGGCAGGAACAGATTGCAAGGGCAGAGAGTAGATAAGGAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | CATACAGATAGGTTCTCTGAATTAACTGAGGAAGCAGGCTCAGGGAAAACAGTGGATAGCCCAGGGAAGTaGAGGTCTCTTGAAGATATT | + |
Preference number: 4 (lower is better) Translates to: HTDRFSELTEEAGSGKTVDSPGK*RSLEDI Trigger: AATATCTTCAAGAGACCTTCACTTCCCTGGGCTATC...CACTGTTTTCCCTGAGCCTGCTTCCTCAGTTAATTCAGAGAACCTATCTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR GCA 90 bp | ATTTCCGTGTGCCCACACATCTTCACTCATTCACTTACATCTTTACTCAGTGCAAGATTCCTAGGGGCTTaGTCTGCATCCTGTAAGTCT | + |
Preference number: 4 (lower is better) Translates to: ISVCPHIFTHSLTSLLSARFLGA*SASCKS Trigger: AGACTTACAGGATGCAGAGCAAGCCCCTAGGAATCT...TGCACTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR GCA 90 bp | GCTTCCTTATCTACTCTCTGCCCTTGCAATCTGTTCCTGCCAAAGAAACAAAAAAGTGAACTTGATCTCTaGCCATCATGCTTTGGGAGC | + |
Preference number: 4 (lower is better) Translates to: ASLSTLCPCNLFLPKKQKSELDL*PSCFGS Trigger: GCTCCCAAAGCATGATGGGCAGAGATCAAGTTCACT...TTTTTGTTTCTTTGGCAGGAACAGATTGCAAGGGCAGAGAGTAGATAAGGAAGC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR GCA 90 bp | TATGTCTTACTGTTCTCCACACTCTGGCAAAACATCCGACTAAGGAATGTAAGTTGCTGGGAGAGCTTCTaGAGATACACAGAGGATGAG | + |
Preference number: 4 (lower is better) Translates to: YVLLFSTLWQNIRLRNVSCWESF*RYTEDE Trigger: CTCATCCTCTGTGTATCTGCAGAAGCTCTCCCAGCA...ACTTACATTCCTTAGTCGGATGTTTTGCCAGAGTGTGGAGAACAGTAAGACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | AAATACATTTTAGTACATGCAGAAAATGGAAGCCATGAGCCCGAGGAGGCTGAAAGAAACTCTTGTCCTTaGCTATCTTGCCTCTGCCTG | + |
Preference number: 4 (lower is better) Translates to: KYILVHAENGSHEPEEAERNSCP*LSCLCL Trigger: CAGGCAGAGGCAAGATAGCCAAGGACAAGAGTTTCT...TTCAGCCTCCTCGGGCTCATGGCTTCCATTTTCTGCATGTACTAAAATGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS-3UTR TCA 90 bp | CAGTATTTCCGTGTGCCCACACATCTTCACTCATTCACTTACATCTTTACTCAGGAGGATACATCGTTCTaGTCTAAGCTCTCACCAATC | + |
Preference number: 4 (lower is better) Translates to: QYFRVPTHLHSFTYIFTQEDTSF*SKLSPI Trigger: GATTGGTGAGAGCTTAGATCAGAACGATGTATCCTC...CTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAATACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | AGCTTCCTTATCTACTCTCTGCCCTTGCAATCTGTTCCTGCCAAAGAAACAAAATTCACCAGTGTTCTTTaGCTGTCACGGTATTCCACA | + |
Preference number: 4 (lower is better) Translates to: SFLIYSLPLQSVPAKETKFTSVL*LSRYST Trigger: TGTGGAATACCGTGACAGTCAAAGAACACTGGTGAA...TTTTGTTTCTTTGGCAGGAACAGATTGCAAGGGCAGAGAGTAGATAAGGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | CAGTATTTCCGTGTGCCCACACATCTTCACTCATTCACTTACATCTTTACTCAGTTCACCAGTGTTCTTTaGCTGTCACGGTATTCCACA | + |
Preference number: 4 (lower is better) Translates to: QYFRVPTHLHSFTYIFTQFTSVL*LSRYST Trigger: TGTGGAATACCGTGACAGTCAAAGAACACTGGTGAA...CTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAATACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | GCAATTATGCCTAGAATCTCAGCAAGCAGACAGAGGCAGAAGATAAATCCCACATGCCAATACAATCAATaGTCAAGCAGATTCCTAGGG | + |
Preference number: 4 (lower is better) Translates to: AIMPRISASRQRQKINPTCQYNQ*SSRFLG Trigger: CCCTAGGAATCTGCTTGATCATTGATTGTATTGGCA...TGTGGGATTTATCTTCTGCCTCTGTCTGCTTGCTGAGATTCTAGGCATAATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | GCTTCCTTATCTACTCTCTGCCCTTGCAATCTGTTCCTGCCAAAGAAACAAAAAGATAGCCCAGGGAAGTaGAGGTCTCTTGAAGATATT | + |
Preference number: 4 (lower is better) Translates to: ASLSTLCPCNLFLPKKQKDSPGK*RSLEDI Trigger: AATATCTTCAAGAGACCTTCACTTCCCTGGGCTATC...TTTTTGTTTCTTTGGCAGGAACAGATTGCAAGGGCAGAGAGTAGATAAGGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | ACATTTGCTAATGCACATAGGACAGAGACTAAAAGAAAGCTTTCCACAGTAGTCATCTTGCTCCTTGGCTaGACTGGGTGTACTTCTGGA | + |
Preference number: 4 (lower is better) Translates to: TFANAHRTETKRKLSTVVILLLG*TGCTSG Trigger: TCCAGAAGTACACCCAGTCCAGCCAAGGAGCAAGAT...GACTACTGTGGAAAGCTTTCTTTTAGTCTCTGTCCTATGTGCATTAGCAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS-3UTR CCA 90 bp | ACAAGCACACAGAGTCCATTTTATGTTAGCCAATTACTCCTGGGTCTGGGGCCTTTATGTCATGTGACTTaGGAAACAAGAAAAGCTGGA | + |
Preference number: 4 (lower is better) Translates to: TSTQSPFYVSQLLLGLGPLCHVT*ETRKAG Trigger: TCCAGCTTTTCTTGTTTCCCAAGTCACATGACATAA...AGGCCCCAGACCCAGGAGTAATTGGCTAACATAAAATGGACTCTGTGTGCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | CATACAGATAGGTTCTCTGAATTAACTGAGGAAGCAGGCTCAGGGAAAACAGTGTATCGGCGAACAATCTaGGTTATGTCATGTGACTTG | + |
Preference number: 4 (lower is better) Translates to: HTDRFSELTEEAGSGKTVYRRTI*VMSCDL Trigger: CAAGTCACATGACATAACCCAGATTGTTCGCCGATA...CACTGTTTTCCCTGAGCCTGCTTCCTCAGTTAATTCAGAGAACCTATCTGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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3UTR CAA 72 bp | AATAAATACAGAGCAAACTGGAAATGGTATAAGCCTTaGAAACCTCAAAGCCTGTCCCTGTCCCCCAGTAAC | + |
Preference number: 4 (lower is better) Translates to: NKYRANWKWYKP*KPQSLSLSPSN Trigger: GTTACTGGGGGACAGGGACAGGCTTTGAGGTTTCAAAGGCTTATACCATTTCCAGTTTGCTCTGTATTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | AGCTTCCTTATCTACTCTCTGCCCTTGCAATCTGTTCCTGCCAAAGAAACAAAAGACTGGGTGTACTTCTaGATCTTTGTGTTCAAGTCT | + |
Preference number: 4 (lower is better) Translates to: SFLIYSLPLQSVPAKETKDWVYF*IFVFKS Trigger: AGACTTGAACACAAAGATCCAGAAGTACACCCAGTC...TTTTGTTTCTTTGGCAGGAACAGATTGCAAGGGCAGAGAGTAGATAAGGAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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3UTR CAA 72 bp | ACAAACAAACAAACAAACAAACATCTCCATAAAAGCTaGTGTGTGTCCCTCAGTATTTCCGTGTGCCCACAC | + |
Preference number: 4 (lower is better) Translates to: TNKQTNKHLHKS*CVSLSISVCPH Trigger: GTGTGGGCACACGGAAATACTGAGGGACACACACAAGCTTTTATGGAGATGTTTGTTTGTTTGTTTGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR TCA 90 bp | TATGTCTTACTGTTCTCCACACTCTGGCAAAACATCCGACTAAGGAATGTAAGTGAGAGTATTCATATTTaGTCTTGCTCCTTGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: YVLLFSTLWQNIRLRNVSESIHI*SCSLAG Trigger: TCCAGCCAAGGAGCAAGATCAAATATGAATACTCTC...ACTTACATTCCTTAGTCGGATGTTTTGCCAGAGTGTGGAGAACAGTAAGACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | CAGTATTTCCGTGTGCCCACACATCTTCACTCATTCACTTACATCTTTACTCAGGTATTCCACAAATCTTaGCTCTTTACTTCGCCCATT | + |
Preference number: 4 (lower is better) Translates to: QYFRVPTHLHSFTYIFTQVFHKS*LFTSPI Trigger: AATGGGCGAAGTAAAGAGCCAAGATTTGTGGAATAC...CTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAATACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CCA 90 bp | TATGTCTTACTGTTCTCCACACTCTGGCAAAACATCCGACTAAGGAATGTAAGTTTATGTCATGTGACTTaGGAAACAAGAAAAGCTGGA | + |
Preference number: 4 (lower is better) Translates to: YVLLFSTLWQNIRLRNVSLCHVT*ETRKAG Trigger: TCCAGCTTTTCTTGTTTCCCAAGTCACATGACATAA...ACTTACATTCCTTAGTCGGATGTTTTGCCAGAGTGTGGAGAACAGTAAGACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | TCCTGCAGCCTTAGTTCTACAGGACCCGCCCCTTCACAGGCTCTGGCAGTTCACTGGGCGTCTCCTGCCTaGCTTCAGCTGCTGGGAGAG | + |
Preference number: 5 (lower is better) Translates to: SCSLSSTGPAPSQALAVHWASPA*LQLLGE Trigger: CTCTCCCAGCAGCTGAAGCAAGGCAGGAGACGCCCA...GTGAACTGCCAGAGCCTGTGAAGGGGCGGGTCCTGTAGAACTAAGGCTGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS GCA 90 bp | TCAACGTGGAGGTCCACGAGTGGGCGTCTCCTGCCTTGCTTCAGCTaGTGGGAGAGCTTCTGCAGATACACAGAGGATGAGCTGGAGGGC | + |
Preference number: 5 (lower is better) Translates to: STWRSTSGRLLPCFS*WESFCRYTEDELEG Trigger: GCCCTCCAGCTCATCCTCTGTGTATCTGCAGAAGCTCTCCCAGCAGCTGAAGCAAGGCAGGAGACGCCCACTCGTGGACCTCCACGTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CCA 90 bp | ACGTGGAGGTCCACGAGTGGGCGTCTCCTGCCTTGCTTCAGCTGCTaGGAGAGCTTCTGCAGATACACAGAGGATGAGCTGGAGGGCTTC | + |
Preference number: 5 (lower is better) Translates to: TWRSTSGRLLPCFSC*ESFCRYTEDELEGF Trigger: GAAGCCCTCCAGCTCATCCTCTGTGTATCTGCAGAAGCTCTCCCAGCAGCTGAAGCAAGGCAGGAGACGCCCACTCGTGGACCTCCACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CCA 90 bp | CCACGCATACACTTTGTCCATGAGTTCAACGTGGAGGTCCACGAGTaGGCGTCTCCTGCCTTGCTTCAGCTGCTGGGAGAGCTTCTGCAG | + |
Preference number: 5 (lower is better) Translates to: PRIHFVHEFNVEVHE*ASPALLQLLGELLQ Trigger: CTGCAGAAGCTCTCCCAGCAGCTGAAGCAAGGCAGGAGACGCCCACTCGTGGACCTCCACGTTGAACTCATGGACAAAGTGTATGCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS GCA 90 bp | TCCATGAGTTCAACGTGGAGGTCCACGAGTGGGCGTCTCCTGCCTTaGTTCAGCTGCTGGGAGAGCTTCTGCAGATACACAGAGGATGAG | + |
Preference number: 5 (lower is better) Translates to: SMSSTWRSTSGRLLP*FSCWESFCRYTEDE Trigger: CTCATCCTCTGTGTATCTGCAGAAGCTCTCCCAGCAGCTGAAGCAAGGCAGGAGACGCCCACTCGTGGACCTCCACGTTGAACTCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CCA 90 bp | GCTTCAGCTGCTGGGAGAGCTTCTGCAGATACACAGAGGATGAGCTaGAGGGCTTCTCCAAGTGAGATACGTCTGCTGTGCACAGGCTCC | + |
Preference number: 5 (lower is better) Translates to: ASAAGRASADTQRMS*RASPSEIRLLCTGS Trigger: GGAGCCTGTGCACAGCAGACGTATCTCACTTGGAGAAGCCCTCCAGCTCATCCTCTGTGTATCTGCAGAAGCTCTCCCAGCAGCTGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | ACCCTAGGCCAGGACTCACGGCAGAGCCAGAAGCAGCCAGAAGCAGCCGTAACCAAGAAACTCTTGTCCTaGGCTATCTTGCCTCTGCCT | + |
Preference number: 5 (lower is better) Translates to: TLGQDSRQSQKQPEAAVTKKLLS*AILPLP Trigger: AGGCAGAGGCAAGATAGCCAAGGACAAGAGTTTCTT...GGTTACGGCTGCTTCTGGCTGCTTCTGGCTCTGCCGTGAGTCCTGGCCTAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS TCA 90 bp | GCCTTGCTTCAGCTGCTGGGAGAGCTTCTGCAGATACACAGAGGATaGGCTGGAGGGCTTCTCCAAGTGAGATACGTCTGCTGTGCACAG | + |
Preference number: 5 (lower is better) Translates to: ALLQLLGELLQIHRG*AGGLLQVRYVCCAQ Trigger: CTGTGCACAGCAGACGTATCTCACTTGGAGAAGCCCTCCAGCTCATCCTCTGTGTATCTGCAGAAGCTCTCCCAGCAGCTGAAGCAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | AGGACCCGCCCCTTCACAGGCTCTGGCAGTTCACAGATGATATGGATGCTGGGGTCCTCCACGGTTGCTTaGTCTGTCTTCAAGATCCTC | + |
Preference number: 5 (lower is better) Translates to: RTRPFTGSGSSQMIWMLGSSTVA*SVFKIL Trigger: GAGGATCTTGAAGACAGACAAAGCAACCGTGGAGGA...CCCCAGCATCCATATCATCTGTGAACTGCCAGAGCCTGTGAAGGGGCGGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | CAGCTGGTGAGGGTCAGGCCAGCCCTCCTGTGCTCATGGGTAACTATTTTTCTATGTGCAGTGTCTGGGTaGCAGGGGCTTAGAGTCCAC | + |
Preference number: 5 (lower is better) Translates to: QLVRVRPALLCSWVTIFLCAVSG*QGLRVH Trigger: GTGGACTCTAAGCCCCTGCAACCCAGACACTGCACA...TAGAAAAATAGTTACCCATGAGCACAGGAGGGCTGGCCTGACCCTCACCAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | TCCCCCAGTAACAGTTCCTCTAGCGAGGCCACACCTTTCAAACAGCACACCTGGGGTGGTCCTCCACGGTaGCTTTGTCTGTCTTCAAGA | + |
Preference number: 5 (lower is better) Translates to: SPSNSSSSEATPFKQHTWGGPPR*LCLSSR Trigger: TCTTGAAGACAGACAAAGCAACCGTGGAGGACCACC...CCAGGTGTGCTGTTTGAAAGGTGTGGCCTCGCTAGAGGAACTGTTACTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | GGAAGCCATGAGCCCGAGGAGGCTGAAGCAAGAGGAGGCTCATTGCAAGTTCAATCCTCCACGGTTGCTTaGTCTGTCTTCAAGATCCTC | + |
Preference number: 5 (lower is better) Translates to: GSHEPEEAEARGGSLQVQSSTVA*SVFKIL Trigger: GAGGATCTTGAAGACAGACAAAGCAACCGTGGAGGA...TTGAACTTGCAATGAGCCTCCTCTTGCTTCAGCCTCCTCGGGCTCATGGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS TCA 90 bp | GCAGGTGGTCCTCCACGGTTGCTTTGTCTGTCTTCAAGATCCTCTTaGGAAGGTCAAACCGCCTCACTCTGTAGAGCAATTCAGCCAAGG | + |
Preference number: 5 (lower is better) Translates to: AGGPPRLLCLSSRSS*EGQTASLCRAIQPR Trigger: CCTTGGCTGAATTGCTCTACAGAGTGAGGCGGTTTGACCTTCTCAAGAGGATCTTGAAGACAGACAAAGCAACCGTGGAGGACCACCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS GCA 90 bp | ATCAGAAACCAGGTGAGGGTTTCTGCGCAGGTGGTCCTCCACGGTTaGTTTGTCTGTCTTCAAGATCCTCTTGAGAAGGTCAAACCGCCT | + |
Preference number: 5 (lower is better) Translates to: IRNQVRVSAQVVLHG*FVCLQDPLEKVKPP Trigger: AGGCGGTTTGACCTTCTCAAGAGGATCTTGAAGACAGACAAAGCAACCGTGGAGGACCACCTGCGCAGAAACCCTCACCTGGTTTCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS GCA 90 bp | TCTCCATCAGCAGGACCCTATAATCAGAAACCAGGTGAGGGTTTCTaGGCAGGTGGTCCTCCACGGTTGCTTTGTCTGTCTTCAAGATCC | + |
Preference number: 5 (lower is better) Translates to: SPSAGPYNQKPGEGF*AGGPPRLLCLSSRS Trigger: GGATCTTGAAGACAGACAAAGCAACCGTGGAGGACCACCTGCGCAGAAACCCTCACCTGGTTTCTGATTATAGGGTCCTGCTGATGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS GCA 90 bp | CAGAGGATGAGCTGGAGGGCTTCTCCAAGTGAGATACGTCTGCTGTaGACAGGCTCCAAAAGATATCAGCTTCTGGGTGAGTTGTGCAGT | + |
Preference number: 5 (lower is better) Translates to: QRMSWRASPSEIRLL*TGSKRYQLLGELCS Trigger: ACTGCACAACTCACCCAGAAGCTGATATCTTTTGGAGCCTGTGCACAGCAGACGTATCTCACTTGGAGAAGCCCTCCAGCTCATCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | AGCCATGAGCCCGAGGAGGCTGAAGCAAGAGGAGGCTCATTGCAAGTTCAAGGCGGAGAGTATTCATATTaGATCTTGCTCCTTGGCTGG | + |
Preference number: 5 (lower is better) Translates to: SHEPEEAEARGGSLQVQGGEYSY*ILLLGW Trigger: CCAGCCAAGGAGCAAGATCAAATATGAATACTCTCC...GCCTTGAACTTGCAATGAGCCTCCTCTTGCTTCAGCCTCCTCGGGCTCATGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS-3UTR CAA 90 bp | GCAGCCTTAGTTCTACAGGACCCGCCCCTTCACAGGCTCTGGCAGTTCACAGATGGAGAGTATTCATATTaGATCTTGCTCCTTGGCTGG | + |
Preference number: 5 (lower is better) Translates to: AALVLQDPPLHRLWQFTDGEYSY*ILLLGW Trigger: CCAGCCAAGGAGCAAGATCAAATATGAATACTCTCC...ATCTGTGAACTGCCAGAGCCTGTGAAGGGGCGGGTCCTGTAGAACTAAGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | TGGTCATCCCTCCTGTTCCTGATCCTGAGCCAACCAGGGCAAGCTCCCCCACTCGGAAGTGAAGGTCTCTaGAAGATATTTTGTGTCGTT | + |
Preference number: 5 (lower is better) Translates to: WSSLLFLILSQPGQAPPLGSEGL*KIFCVV Trigger: AACGACACAAAATATCTTCAAGAGACCTTCACTTCC...GAGTGGGGGAGCTTGCCCTGGTTGGCTCAGGATCAGGAACAGGAGGGATGACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | TATATCATGCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCTGTGCAGTGTCTGGGTaGCAGGGGCTTAGAGTCCAC | + |
Preference number: 5 (lower is better) Translates to: YIMHPTPLMSPASLSTLCCAVSG*QGLRVH Trigger: GTGGACTCTAAGCCCCTGCAACCCAGACACTGCACA...GCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGCATGATATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS GCA 90 bp | CATGATCCAAGGAGAACCCTGAGTGAACTTGATCTCTGCCCATCATaGTTTGGGAGCCTCCTAGGCTCACCAGAACACATGCAAAGCTGT | + |
Preference number: 5 (lower is better) Translates to: HDPRRTLSELDLCPS*FGSLLGSPEHMQSC Trigger: ACAGCTTTGCATGTGTTCTGGTGAGCCTAGGAGGCTCCCAAAGCATGATGGGCAGAGATCAAGTTCACTCAGGGTTCTCCTTGGATCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | CAGCTGGTGAGGGTCAGGCCAGCCCTCCTGTGCTCATGGGTAACTATTTTTCTAAAGAAACTCTTGTCCTaGGCTATCTTGCCTCTGCCT | + |
Preference number: 5 (lower is better) Translates to: QLVRVRPALLCSWVTIFLKKLLS*AILPLP Trigger: AGGCAGAGGCAAGATAGCCAAGGACAAGAGTTTCTT...TAGAAAAATAGTTACCCATGAGCACAGGAGGGCTGGCCTGACCCTCACCAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | GCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCCCTTGCAACTTCACCAGTGTTCTTaGACTGTCACGGTATTCCAC | + |
Preference number: 5 (lower is better) Translates to: APNPTHVSSFLIYSLPLQLHQCS*TVTVFH Trigger: GTGGAATACCGTGACAGTCAAAGAACACTGGTGAAG...TTGCAAGGGCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | CAGTATTTCCGTGTGCCCACACATCTTCACTCATTCACTTACATCTTTACTCAGTGGGCGTCTCCTGCCTaGCTTCAGCTGCTGGGAGAG | + |
Preference number: 5 (lower is better) Translates to: QYFRVPTHLHSFTYIFTQWASPA*LQLLGE Trigger: CTCTCCCAGCAGCTGAAGCAAGGCAGGAGACGCCCA...CTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAATACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS TCA 90 bp | AGCTTCTGCAGATACACAGAGGATGAGCTGGAGGGCTTCTCCAAGTaGGATACGTCTGCTGTGCACAGGCTCCAAAAGATATCAGCTTCT | + |
Preference number: 5 (lower is better) Translates to: SFCRYTEDELEGFSK*DTSAVHRLQKISAS Trigger: AGAAGCTGATATCTTTTGGAGCCTGTGCACAGCAGACGTATCTCACTTGGAGAAGCCCTCCAGCTCATCCTCTGTGTATCTGCAGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | TCATTGCAAGTTCAAGGCCAGCCTAGGTTACATAATGGATTCCAGGCCAGGCTGGTCTTCAAGATCCTCTaGAGAAGGTCAAACCGCCTC | + |
Preference number: 5 (lower is better) Translates to: SLQVQGQPRLHNGFQARLVFKIL*RRSNRL Trigger: GAGGCGGTTTGACCTTCTCAAGAGGATCTTGAAGAC...CAGCCTGGCCTGGAATCCATTATGTAACCTAGGCTGGCCTTGAACTTGCAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS-3UTR CAA 90 bp | GCAGCCTTAGTTCTACAGGACCCGCCCCTTCACAGGCTCTGGCAGTTCACAGATGGAAGTGAAGGTCTCTaGAAGATATTTTGTGTCGTT | + |
Preference number: 5 (lower is better) Translates to: AALVLQDPPLHRLWQFTDGSEGL*KIFCVV Trigger: AACGACACAAAATATCTTCAAGAGACCTTCACTTCC...ATCTGTGAACTGCCAGAGCCTGTGAAGGGGCGGGTCCTGTAGAACTAAGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | TATATCATGCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCGTCTTCAAGATCCTCTaGAGAAGGTCAAACCGCCTC | + |
Preference number: 5 (lower is better) Translates to: YIMHPTPLMSPASLSTLCVFKIL*RRSNRL Trigger: GAGGCGGTTTGACCTTCTCAAGAGGATCTTGAAGAC...GCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGCATGATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | AAAGCTTGTGTGTGTCCCTCAGTATTTCCGTGTGCCCACACATCTTCACTCATTGTCTTCAAGATCCTCTaGAGAAGGTCAAACCGCCTC | + |
Preference number: 5 (lower is better) Translates to: KACVCPSVFPCAHTSSLIVFKIL*RRSNRL Trigger: GAGGCGGTTTGACCTTCTCAAGAGGATCTTGAAGAC...AATGAGTGAAGATGTGTGGGCACACGGAAATACTGAGGGACACACACAAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | GCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCCCTTGCAAAGCCTTGAGTTATACTaGATACTCAATTTTGGGAGC | + |
Preference number: 5 (lower is better) Translates to: APNPTHVSSFLIYSLPLQSLELY*ILNFGS Trigger: GCTCCCAAAATTGAGTATCAAGTATAACTCAAGGCT...TTGCAAGGGCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | TATATCATGCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCCTTCACCAGTGTTCTTaGACTGTCACGGTATTCCAC | + |
Preference number: 5 (lower is better) Translates to: YIMHPTPLMSPASLSTLCLHQCS*TVTVFH Trigger: GTGGAATACCGTGACAGTCAAAGAACACTGGTGAAG...GCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGCATGATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | AGCTTCCTTATCTACTCTCTGCCCTTGCAATCTGTTCCTGCCAAAGAAACAAAAGGTGGTCCTCCACGGTaGCTTTGTCTGTCTTCAAGA | + |
Preference number: 5 (lower is better) Translates to: SFLIYSLPLQSVPAKETKGGPPR*LCLSSR Trigger: TCTTGAAGACAGACAAAGCAACCGTGGAGGACCACC...TTTTGTTTCTTTGGCAGGAACAGATTGCAAGGGCAGAGAGTAGATAAGGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS TCA 90 bp | TTGGGCCATACTTGCATATCGGCGAACAATCTGGGTTATGTCATGTaGCTTGGGAAACAAGAAAAGCTGGATATGATAGCCCAGGGAAGT | + |
Preference number: 5 (lower is better) Translates to: LGHTCISANNLGYVM*LGKQEKLDMIAQGS Trigger: ACTTCCCTGGGCTATCATATCCAGCTTTTCTTGTTTCCCAAGTCACATGACATAACCCAGATTGTTCGCCGATATGCAAGTATGGCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CCA 90 bp | GGAGCGAAGCCTGGAGAGTATTCATATTTGATCTTGCTCCTTGGCTaGACTGGGTGTACTTCTGGATCTTTGTGTTCAAGTCTATTCTGT | + |
Preference number: 5 (lower is better) Translates to: GAKPGEYSYLILLLG*TGCTSGSLCSSLFC Trigger: ACAGAATAGACTTGAACACAAAGATCCAGAAGTACACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS CCA 90 bp | TGGAGCCTTGAGTTATACTTGATACTCAATTTTGGGAGCGAAGCCTaGAGAGTATTCATATTTGATCTTGCTCCTTGGCTGGACTGGGTG | + |
Preference number: 5 (lower is better) Translates to: WSLELYLILNFGSEA*RVFIFDLAPWLDWV Trigger: CACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAGTATAACTCAAGGCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS CCA 90 bp | CTGTCACGGTATTCCACAAATCTTGGCTCTTTACTTCGCCCATTCTaGAGCCTTGAGTTATACTTGATACTCAATTTTGGGAGCGAAGCC | + |
Preference number: 5 (lower is better) Translates to: LSRYSTNLGSLLRPF*SLELYLILNFGSEA Trigger: GGCTTCGCTCCCAAAATTGAGTATCAAGTATAACTCAAGGCTCCAGAATGGGCGAAGTAAAGAGCCAAGATTTGTGGAATACCGTGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS CCA 90 bp | CTCACCCTTGAGTTATACTTGATACTCAATTTTGGGAGCGAAGCCTaGAGAGTATTCATATTTGATCTTGCTCCTTGGCTGGACTGGGTG | + |
Preference number: 5 (lower is better) Translates to: LTLELYLILNFGSEA*RVFIFDLAPWLDWV Trigger: CACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAGTATAACTCAAGGGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS-3UTR CAA 90 bp | TATATCATGCACCCAACCCCACTCATGTCTCCAGCTTCCTTATCTACTCTCTGCGTTATGTCATGTGACTaGGGAAACAAGAAAAGCTGG | + |
Preference number: 5 (lower is better) Translates to: YIMHPTPLMSPASLSTLCVMSCD*GNKKSW Trigger: CCAGCTTTTCTTGTTTCCCAAGTCACATGACATAAC...GCAGAGAGTAGATAAGGAAGCTGGAGACATGAGTGGGGTTGGGTGCATGATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | AACTGGAAATGGTATAAGCCTTTGAAACCTCAAAGCCTGTCCCTGTCCCCCAGTGTTATGTCATGTGACTaGGGAAACAAGAAAAGCTGG | + |
Preference number: 5 (lower is better) Translates to: NWKWYKPLKPQSLSLSPSVMSCD*GNKKSW Trigger: CCAGCTTTTCTTGTTTCCCAAGTCACATGACATAAC...ACTGGGGGACAGGGACAGGCTTTGAGGTTTCAAAGGCTTATACCATTTCCAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114313.8 |
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CDS TCA 90 bp | CTTGATACTCAATTTTGGGAGCGAAGCCTGGAGAGTATTCATATTTaGTCTTGCTCCTTGGCTGGACTGGGTGTACTTCTGGATCTTTGT | + |
Preference number: 5 (lower is better) Translates to: LDTQFWERSLESIHI*SCSLAGLGVLLDLC Trigger: ACAAAGATCCAGAAGTACACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS TCA 90 bp | GTATTCCACAAATCTTGGCTCTTTACTTCGCCCATTCTGGAGCCTTaGGTTATACTTGATACTCAATTTTGGGAGCGAAGCCTGGAGAGT | + |
Preference number: 5 (lower is better) Translates to: VFHKSWLFTSPILEP*VILDTQFWERSLES Trigger: ACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAGTATAACTCAAGGCTCCAGAATGGGCGAAGTAAAGAGCCAAGATTTGTGGAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS CCA 90 bp | TTTGGGAGCGAAGCCTGGAGAGTATTCATATTTGATCTTGCTCCTTaGCTGGACTGGGTGTACTTCTGGATCTTTGTGTTCAAGTCTATT | + |
Preference number: 5 (lower is better) Translates to: FGSEAWRVFIFDLAP*LDWVYFWIFVFKSI Trigger: AATAGACTTGAACACAAAGATCCAGAAGTACACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | GGTAGATTCTCTGTGCATGGTTATAGAAGAAACTGGTCTAGATTAGTCTCCTTAGGTGGTCCTCCACGGTaGCTTTGTCTGTCTTCAAGA | + |
Preference number: 5 (lower is better) Translates to: GRFSVHGYRRNWSRLVSLGGPPR*LCLSSR Trigger: TCTTGAAGACAGACAAAGCAACCGTGGAGGACCACC...TAAGGAGACTAATCTAGACCAGTTTCTTCTATAACCATGCACAGAGAATCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS TCA 90 bp | TTTGATACTCAATTTTGGGAGCGAAGCCTGGAGAGTATTCATATTTaGTCTTGCTCCTTGGCTGGACTGGGTGTACTTCTGGATCTTTGT | + |
Preference number: 5 (lower is better) Translates to: FDTQFWERSLESIHI*SCSLAGLGVLLDLC Trigger: ACAAAGATCCAGAAGTACACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097722.9 |
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CDS-3UTR CAA 90 bp | ATTTCCGTGTGCCCACACATCTTCACTCATTCACTTACATCTTTACTCAGTGCAGGTATTCCACAAATCTaGGCTCTTTACTTCGCCCAT | + |
Preference number: 5 (lower is better) Translates to: ISVCPHIFTHSLTSLLSAGIPQI*ALYFAH Trigger: ATGGGCGAAGTAAAGAGCCAAGATTTGTGGAATACC...TGCACTGAGTAAAGATGTAAGTGAATGAGTGAAGATGTGTGGGCACACGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | GGTAGATTCTCTGTGCATGGTTATAGAAGAAACTGGTCTAGATTAGTCTCCTTAAAGAAACTCTTGTCCTaGGCTATCTTGCCTCTGCCT | + |
Preference number: 5 (lower is better) Translates to: GRFSVHGYRRNWSRLVSLKKLLS*AILPLP Trigger: AGGCAGAGGCAAGATAGCCAAGGACAAGAGTTTCTT...TAAGGAGACTAATCTAGACCAGTTTCTTCTATAACCATGCACAGAGAATCTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS-3UTR CAA 90 bp | TATGTCTTACTGTTCTCCACACTCTGGCAAAACATCCGACTAAGGAATGTAAGTGGAGAGTATTCATATTaGATCTTGCTCCTTGGCTGG | + |
Preference number: 5 (lower is better) Translates to: YVLLFSTLWQNIRLRNVSGEYSY*ILLLGW Trigger: CCAGCCAAGGAGCAAGATCAAATATGAATACTCTCC...ACTTACATTCCTTAGTCGGATGTTTTGCCAGAGTGTGGAGAACAGTAAGACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS-3UTR CAA 90 bp | TATGTCTTACTGTTCTCCACACTCTGGCAAAACATCCGACTAAGGAATGTAAGTGGTATTCCACAAATCTaGGCTCTTTACTTCGCCCAT | + |
Preference number: 5 (lower is better) Translates to: YVLLFSTLWQNIRLRNVSGIPQI*ALYFAH Trigger: ATGGGCGAAGTAAAGAGCCAAGATTTGTGGAATACC...ACTTACATTCCTTAGTCGGATGTTTTGCCAGAGTGTGGAGAACAGTAAGACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS TCA 90 bp | GTGACTTGGGAAACAAGAAAAGCTGGATATGATAGCCCAGGGAAGTaGAGGTCTCTTGAAGATATTTTGTGTCGTTGCCAATACAATCAA | + |
Preference number: 5 (lower is better) Translates to: VTWETRKAGYDSPGK*RSLEDILCRCQYNQ Trigger: TTGATTGTATTGGCAACGACACAAAATATCTTCAAGAGACCTTCACTTCCCTGGGCTATCATATCCAGCTTTTCTTGTTTCCCAAGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CCA 90 bp | AAATATAAAACAGAAGGTTTGATACTCAATTTTGGGAGCGAAGCCTaGAGAGTATTCATATTTGATCTTGCTCCTTGGCTGGACTGGGTG | + |
Preference number: 5 (lower is better) Translates to: KYKTEGLILNFGSEA*RVFIFDLAPWLDWV Trigger: CACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAACCTTCTGTTTTATATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097722.9 |
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CDS-3UTR CAA 90 bp | TATGTCTTACTGTTCTCCACACTCTGGCAAAACATCCGACTAAGGAATGTAAGTAGCCTTGAGTTATACTaGATACTCAATTTTGGGAGC | + |
Preference number: 5 (lower is better) Translates to: YVLLFSTLWQNIRLRNVSSLELY*ILNFGS Trigger: GCTCCCAAAATTGAGTATCAAGTATAACTCAAGGCT...ACTTACATTCCTTAGTCGGATGTTTTGCCAGAGTGTGGAGAACAGTAAGACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS TCA 90 bp | CTTTACTTCGCCCATTCTGGAGCTTCAAATATAAAACAGAAGGTTTaGTACTCAATTTTGGGAGCGAAGCCTGGAGAGTATTCATATTTG | + |
Preference number: 5 (lower is better) Translates to: LYFAHSGASNIKQKV*YSILGAKPGEYSYL Trigger: CAAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAACCTTCTGTTTTATATTTGAAGCTCCAGAATGGGCGAAGTAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097722.9 |
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CDS-3UTR CAA 90 bp | TATGGAACAATATCTAAGGAGTCTCTGTTCAGAAGAGCAGACATGATATGCTACACCCTTGAGTTATACTaGATACTCAATTTTGGGAGC | + |
Preference number: 5 (lower is better) Translates to: YGTISKESLFRRADMICYTLELY*ILNFGS Trigger: GCTCCCAAAATTGAGTATCAAGTATAACTCAAGGGT...GTAGCATATCATGTCTGCTCTTCTGAACAGAGACTCCTTAGATATTGTTCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS GCA 72 bp | TCAACGTGGAGGTCCACGAGTGGGCGTCTCCTGCCTTaGTTCAGCTGCTGGGAGAGCTTCTGCAGATACACA | + |
Preference number: 6 (lower is better) Translates to: STWRSTSGRLLP*FSCWESFCRYT Trigger: TGTGTATCTGCAGAAGCTCTCCCAGCAGCTGAAGCAAGGCAGGAGACGCCCACTCGTGGACCTCCACGTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CCA 72 bp | CACTTTGTCCATGAGTTCAACGTGGAGGTCCACGAGTaGGCGTCTCCTGCCTTGCTTCAGCTGCTGGGAGAG | + |
Preference number: 6 (lower is better) Translates to: HFVHEFNVEVHE*ASPALLQLLGE Trigger: CTCTCCCAGCAGCTGAAGCAAGGCAGGAGACGCCCACTCGTGGACCTCCACGTTGAACTCATGGACAAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CAA 72 bp | TTCAACGTGGAGGTCCACGAGTGGGCGTCTCCTGCCTaGCTTCAGCTGCTGGGAGAGCTTCTGCAGATACAC | + |
Preference number: 6 (lower is better) Translates to: FNVEVHEWASPA*LQLLGELLQIH Trigger: GTGTATCTGCAGAAGCTCTCCCAGCAGCTGAAGCAAGGCAGGAGACGCCCACTCGTGGACCTCCACGTTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS TCA 72 bp | CAGCTGCTGGGAGAGCTTCTGCAGATACACAGAGGATaGGCTGGAGGGCTTCTCCAAGTGAGATACGTCTGC | + |
Preference number: 6 (lower is better) Translates to: QLLGELLQIHRG*AGGLLQVRYVC Trigger: GCAGACGTATCTCACTTGGAGAAGCCCTCCAGCTCATCCTCTGTGTATCTGCAGAAGCTCTCCCAGCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CCA 72 bp | GCTGGGAGAGCTTCTGCAGATACACAGAGGATGAGCTaGAGGGCTTCTCCAAGTGAGATACGTCTGCTGTGC | + |
Preference number: 6 (lower is better) Translates to: AGRASADTQRMS*RASPSEIRLLC Trigger: GCACAGCAGACGTATCTCACTTGGAGAAGCCCTCCAGCTCATCCTCTGTGTATCTGCAGAAGCTCTCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS GCA 72 bp | CAGGTGAGGGTTTCTGCGCAGGTGGTCCTCCACGGTTaGTTTGTCTGTCTTCAAGATCCTCTTGAGAAGGTC | + |
Preference number: 6 (lower is better) Translates to: QVRVSAQVVLHG*FVCLQDPLEKV Trigger: GACCTTCTCAAGAGGATCTTGAAGACAGACAAAGCAACCGTGGAGGACCACCTGCGCAGAAACCCTCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS GCA 72 bp | GCAGGACCCTATAATCAGAAACCAGGTGAGGGTTTCTaGGCAGGTGGTCCTCCACGGTTGCTTTGTCTGTCT | + |
Preference number: 6 (lower is better) Translates to: AGPYNQKPGEGF*AGGPPRLLCLS Trigger: AGACAGACAAAGCAACCGTGGAGGACCACCTGCGCAGAAACCCTCACCTGGTTTCTGATTATAGGGTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS GCA 72 bp | AGGAGAACCCTGAGTGAACTTGATCTCTGCCCATCATaGTTTGGGAGCCTCCTAGGCTCACCAGAACACATG | + |
Preference number: 6 (lower is better) Translates to: RRTLSELDLCPS*FGSLLGSPEHM Trigger: CATGTGTTCTGGTGAGCCTAGGAGGCTCCCAAAGCATGATGGGCAGAGATCAAGTTCACTCAGGGTTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS GCA 72 bp | AGCTGGAGGGCTTCTCCAAGTGAGATACGTCTGCTGTaGACAGGCTCCAAAAGATATCAGCTTCTGGGTGAG | + |
Preference number: 6 (lower is better) Translates to: SWRASPSEIRLL*TGSKRYQLLGE Trigger: CTCACCCAGAAGCTGATATCTTTTGGAGCCTGTGCACAGCAGACGTATCTCACTTGGAGAAGCCCTCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CAA 90 bp | CTGTATTTCTCCTTAGACGAAACACCACTGTTCCACGCATACACTTaGTCCATGAGTTCAACGTGGAGGTCCACGAGTGGGCGTCTCCTG | + |
Preference number: 6 (lower is better) Translates to: LYFSLDETPLFHAYT*SMSSTWRSTSGRLL Trigger: CAGGAGACGCCCACTCGTGGACCTCCACGTTGAACTCATGGACAAAGTGTATGCGTGGAACAGTGGTGTTTCGTCTAAGGAGAAATACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS GCA 72 bp | CACGTAGGAGCCAGGATGAGTTTCTTCCTCAGAGTGTaGTGCAGGCTGAGGCTGTATTTCTCCTTAGACGAA | + |
Preference number: 6 (lower is better) Translates to: HVGARMSFFLRV*CRLRLYFSLDE Trigger: TTCGTCTAAGGAGAAATACAGCCTCAGCCTGCAGCACACTCTGAGGAAGAAACTCATCCTGGCTCCTACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS TCA 72 bp | AGATACACAGAGGATGAGCTGGAGGGCTTCTCCAAGTaGGATACGTCTGCTGTGCACAGGCTCCAAAAGATA | + |
Preference number: 6 (lower is better) Translates to: RYTEDELEGFSK*DTSAVHRLQKI Trigger: TATCTTTTGGAGCCTGTGCACAGCAGACGTATCTCACTTGGAGAAGCCCTCCAGCTCATCCTCTGTGTATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS TCA 72 bp | CCTCCACGGTTGCTTTGTCTGTCTTCAAGATCCTCTTaGGAAGGTCAAACCGCCTCACTCTGTAGAGCAATT | + |
Preference number: 6 (lower is better) Translates to: PPRLLCLSSRSS*EGQTASLCRAI Trigger: AATTGCTCTACAGAGTGAGGCGGTTTGACCTTCTCAAGAGGATCTTGAAGACAGACAAAGCAACCGTGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS CAA 72 bp | TTGGGAGCGAAGCCTGGAGAGTATTCATATTTGATCTaGCTCCTTGGCTGGACTGGGTGTACTTCTGGATCT | + |
Preference number: 6 (lower is better) Translates to: LGAKPGEYSYLI*LLGWTGCTSGS Trigger: AGATCCAGAAGTACACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS TCA 72 bp | CAATTTTGGGAGCGAAGCCTGGAGAGTATTCATATTTaGTCTTGCTCCTTGGCTGGACTGGGTGTACTTCTG | + |
Preference number: 6 (lower is better) Translates to: QFWERSLESIHI*SCSLAGLGVLL Trigger: CAGAAGTACACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS TCA 72 bp | CGTGAACATGTTCTTGACATGATCCAAGGAGAACCCTaGGTGAACTTGATCTCTGCCCATCATGCTTTGGGA | + |
Preference number: 6 (lower is better) Translates to: REHVLDMIQGEP*VNLISAHHALG Trigger: TCCCAAAGCATGATGGGCAGAGATCAAGTTCACTCAGGGTTCTCCTTGGATCATGTCAAGAACATGTTCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS TCA 72 bp | TGCTGGTACTCCATACACTGGCTCCAGACTCACCCTTaGGTTATACTTGATACTCAATTTTGGGAGCGAAGC | + |
Preference number: 6 (lower is better) Translates to: CWYSIHWLQTHP*VILDTQFWERS Trigger: GCTTCGCTCCCAAAATTGAGTATCAAGTATAACTCAAGGGTGAGTCTGGAGCCAGTGTATGGAGTACCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS CAA 72 bp | CCATACACTGGCTCCAGACTCACCCTTGAGTTATACTaGATACTCAATTTTGGGAGCGAAGCCTGGAGAGTA | + |
Preference number: 6 (lower is better) Translates to: PYTGSRLTLELY*ILNFGSEAWRV Trigger: TACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAGTATAACTCAAGGGTGAGTCTGGAGCCAGTGTATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS CAA 90 bp | CCAGAACACATGCAAAGCTGTCATAGTCTTGATGTTGGGCCATACTaGCATATCGGCGAACAATCTGGGTTATGTCATGTGACTTGGGAA | + |
Preference number: 6 (lower is better) Translates to: PEHMQSCHSLDVGPY*HIGEQSGLCHVTWE Trigger: TTCCCAAGTCACATGACATAACCCAGATTGTTCGCCGATATGCAAGTATGGCCCAACATCAAGACTATGACAGCTTTGCATGTGTTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS TCA 72 bp | TCCCTTGTAAGGAAAACTAAGGAGGATACATCGTTCTaGTCTAAGCTCTCACCAATCTCCATCAGCAGGACC | + |
Preference number: 6 (lower is better) Translates to: SLVRKTKEDTSF*SKLSPISISRT Trigger: GGTCCTGCTGATGGAGATTGGTGAGAGCTTAGATCAGAACGATGTATCCTCCTTAGTTTTCCTTACAAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS TCA 72 bp | CATACACTGGCTCCAGACTCACCCTTGAGTTATACTTaGTACTCAATTTTGGGAGCGAAGCCTGGAGAGTAT | + |
Preference number: 6 (lower is better) Translates to: HTLAPDSPLSYT*YSILGAKPGEY Trigger: ATACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAGTATAACTCAAGGGTGAGTCTGGAGCCAGTGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS CCA 72 bp | GAAGCCTGGAGAGTATTCATATTTGATCTTGCTCCTTaGCTGGACTGGGTGTACTTCTGGATCTTTGTGTTC | + |
Preference number: 6 (lower is better) Translates to: EAWRVFIFDLAP*LDWVYFWIFVF Trigger: GAACACAAAGATCCAGAAGTACACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS CCA 72 bp | CATATCGGCGAACAATCTGGGTTATGTCATGTGACTTaGGAAACAAGAAAAGCTGGATATGATAGCCCAGGG | + |
Preference number: 6 (lower is better) Translates to: HIGEQSGLCHVT*ETRKAGYDSPG Trigger: CCCTGGGCTATCATATCCAGCTTTTCTTGTTTCCCAAGTCACATGACATAACCCAGATTGTTCGCCGATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CAA 72 bp | TCAATTTTGGGAGCGAAGCCTGGAGAGTATTCATATTaGATCTTGCTCCTTGGCTGGACTGGGTGTACTTCT | + |
Preference number: 6 (lower is better) Translates to: SILGAKPGEYSY*ILLLGWTGCTS Trigger: AGAAGTACACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS CAA 90 bp | TACTCAATTTTGGGAGCGAAGCCTGGAGAGTATTCATATTTGATCTaGCTCCTTGGCTGGACTGGGTGTACTTCTGGATCTTTGTGTTCA | + |
Preference number: 6 (lower is better) Translates to: YSILGAKPGEYSYLI*LLGWTGCTSGSLCS Trigger: TGAACACAAAGATCCAGAAGTACACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS CAA 90 bp | GCTGGTACTCCATACACTGGCTCCAGACTCACCCTTGAGTTATACTaGATACTCAATTTTGGGAGCGAAGCCTGGAGAGTATTCATATTT | + |
Preference number: 6 (lower is better) Translates to: AGTPYTGSRLTLELY*ILNFGSEAWRVFIF Trigger: AAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAGTATAACTCAAGGGTGAGTCTGGAGCCAGTGTATGGAGTACCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114309.8 |
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CDS TCA 72 bp | CCTGATTCCTGGATGGATGTCTTCACCAGTGTTCTTTaGCTGTCACGGTATTCCACAAATCTTGGCTCTTTA | + |
Preference number: 6 (lower is better) Translates to: PDSWMDVFTSVL*LSRYSTNLGSL Trigger: TAAAGAGCCAAGATTTGTGGAATACCGTGACAGTCAAAGAACACTGGTGAAGACATCCATCCAGGAATCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CCA 72 bp | CCTGGAGAGTATTCATATTTGATCTTGCTCCTTGGCTaGACTGGGTGTACTTCTGGATCTTTGTGTTCAAGT | + |
Preference number: 6 (lower is better) Translates to: PGEYSYLILLLG*TGCTSGSLCSS Trigger: ACTTGAACACAAAGATCCAGAAGTACACCCAGTCCAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS CAA 72 bp | CCAGTGTTCTTTGACTGTCACGGTATTCCACAAATCTaGGCTCTTTACTTCGCCCATTCTGGAGCTTCAAAT | + |
Preference number: 6 (lower is better) Translates to: PVFFDCHGIPQI*ALYFAHSGASN Trigger: ATTTGAAGCTCCAGAATGGGCGAAGTAAAGAGCCAAGATTTGTGGAATACCGTGACAGTCAAAGAACACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097722.9 |
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CDS TCA 72 bp | ACTTGCATATCGGCGAACAATCTGGGTTATGTCATGTaGCTTGGGAAACAAGAAAAGCTGGATATGATAGCC | + |
Preference number: 6 (lower is better) Translates to: TCISANNLGYVM*LGKQEKLDMIA Trigger: GGCTATCATATCCAGCTTTTCTTGTTTCCCAAGTCACATGACATAACCCAGATTGTTCGCCGATATGCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CCA 72 bp | ACAGAAGGTTTGATACTCAATTTTGGGAGCGAAGCCTaGAGAGTATTCATATTTGATCTTGCTCCTTGGCTG | + |
Preference number: 6 (lower is better) Translates to: TEGLILNFGSEA*RVFIFDLAPWL Trigger: CAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAACCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097722.9 |
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CDS CCA 72 bp | CAGTGTTCTTTGACTGTCACGGTATTCCACAAATCTTaGCTCTTTACTTCGCCCATTCTGGAGCTTCAAATA | + |
Preference number: 6 (lower is better) Translates to: QCSLTVTVFHKS*LFTSPILELQI Trigger: TATTTGAAGCTCCAGAATGGGCGAAGTAAAGAGCCAAGATTTGTGGAATACCGTGACAGTCAAAGAACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097722.9 |
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CDS CAA 72 bp | CGCCCATTCTGGAGCTTCAAATATAAAACAGAAGGTTaGATACTCAATTTTGGGAGCGAAGCCTGGAGAGTA | + |
Preference number: 6 (lower is better) Translates to: RPFWSFKYKTEG*ILNFGSEAWRV Trigger: TACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAACCTTCTGTTTTATATTTGAAGCTCCAGAATGGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097722.9 |
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CDS TCA 72 bp | GAAACAAGAAAAGCTGGATATGATAGCCCAGGGAAGTaGAGGTCTCTTGAAGATATTTTGTGTCGTTGCCAA | + |
Preference number: 6 (lower is better) Translates to: ETRKAGYDSPGK*RSLEDILCRCQ Trigger: TTGGCAACGACACAAAATATCTTCAAGAGACCTTCACTTCCCTGGGCTATCATATCCAGCTTTTCTTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000097722.9 ENSMUST00000114313.8 |
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CDS CCA 72 bp | GAGTTATACTTGATACTCAATTTTGGGAGCGAAGCCTaGAGAGTATTCATATTTGATCTTGCTCCTTGGCTG | + |
Preference number: 6 (lower is better) Translates to: ELYLILNFGSEA*RVFIFDLAPWL Trigger: CAGCCAAGGAGCAAGATCAAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAGTATAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069333.8 ENSMUST00000114309.8 ENSMUST00000114313.8 |
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CDS CAA 90 bp | ATGTCTTCACCAGTGTTCTTTGACTGTCACGGTATTCCACAAATCTaGGCTCTTTACTTCGCCCATTCTGGAGCTTCAAATATAAAACAG | + |
Preference number: 6 (lower is better) Translates to: MSSPVFFDCHGIPQI*ALYFAHSGASNIKQ Trigger: CTGTTTTATATTTGAAGCTCCAGAATGGGCGAAGTAAAGAGCCAAGATTTGTGGAATACCGTGACAGTCAAAGAACACTGGTGAAGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097722.9 |
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CDS CCA 72 bp | TATTCCACAAATCTTGGCTCTTTACTTCGCCCATTCTaGAGCCTTGAGTTATACTTGATACTCAATTTTGGG | + |
Preference number: 6 (lower is better) Translates to: YSTNLGSLLRPF*SLELYLILNFG Trigger: CCCAAAATTGAGTATCAAGTATAACTCAAGGCTCCAGAATGGGCGAAGTAAAGAGCCAAGATTTGTGGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069333.8 ENSMUST00000114313.8 |
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CDS CAA 90 bp | TCTTTACTTCGCCCATTCTGGAGCTTCAAATATAAAACAGAAGGTTaGATACTCAATTTTGGGAGCGAAGCCTGGAGAGTATTCATATTT | + |
Preference number: 6 (lower is better) Translates to: SLLRPFWSFKYKTEG*ILNFGSEAWRVFIF Trigger: AAATATGAATACTCTCCAGGCTTCGCTCCCAAAATTGAGTATCAAACCTTCTGTTTTATATTTGAAGCTCCAGAATGGGCGAAGTAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097722.9 |