Pregenerated sensors for CFI (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058952Ensembl transcript IDs: ENSMUST00000077918.7, ENSMUST00000200206.5
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGGCACACACTGGGGTGCCAGCCCTTGGGCACTGGTAGGGGAGTTTaGAGATACAGGTGCCTTCGATACATCTCTGCCACGGCTGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: WHTLGCQPLGTGRGV*RYRCLRYISATAGR Trigger: TCTGCCAGCCGTGGCAGAGATGTATCGAAGGCACCTGTATCTGCAAACTCCCCTACCAGTGCCCAAGGGCTGGCACCCCAGTGTGTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS GCA 90 bp | GGGTGCCAGCCCTTGGGCACTGGTAGGGGAGTTTGCAGATACAGGTaGCTTCGATACATCTCTGCCACGGCTGGCAGAAGACCTTGTTAC | + |
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Preference number: 5 (lower is better) Translates to: GCQPLGTGRGVCRYR*LRYISATAGRRPCY Trigger: GTAACAAGGTCTTCTGCCAGCCGTGGCAGAGATGTATCGAAGGCACCTGTATCTGCAAACTCCCCTACCAGTGCCCAAGGGCTGGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS CCA 90 bp | CTGGTGACAGTATGTCGGGTAGCTCCTTCCATTCATGGCACACACTaGGGTGCCAGCCCTTGGGCACTGGTAGGGGAGTTTGCAGATACA | + |
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Preference number: 5 (lower is better) Translates to: LVTVCRVAPSIHGTH*GASPWALVGEFADT Trigger: TGTATCTGCAAACTCCCCTACCAGTGCCCAAGGGCTGGCACCCCAGTGTGTGCCATGAATGGAAGGAGCTACCCGACATACTGTCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS CCA 90 bp | CGAAACTCTTCTGGTGACAGTATGTCGGGTAGCTCCTTCCATTCATaGCACACACTGGGGTGCCAGCCCTTGGGCACTGGTAGGGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: RNSSGDSMSGSSFHS*HTLGCQPLGTGRGV Trigger: AACTCCCCTACCAGTGCCCAAGGGCTGGCACCCCAGTGTGTGCCATGAATGGAAGGAGCTACCCGACATACTGTCACCAGAAGAGTTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS CCA 90 bp | CCTCACAGACCAAGGGGCCTCCGGAGTCTCCTTTGCAGGCATCAATaGACCCATCACGCGTACCTGCGCACTGCATCTCTTTCTCATAGT | + |
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Preference number: 5 (lower is better) Translates to: PHRPRGLRSLLCRHQ*THHAYLRTASLSHS Trigger: ACTATGAGAAAGAGATGCAGTGCGCAGGTACGCGTGATGGGTCCATTGATGCCTGCAAAGGAGACTCCGGAGGCCCCTTGGTCTGTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 90 bp | GCCATCCTTAATTGCCACCTGCCATGGGTAGTCTCCCACATTCGCTaGCTTCCCTCCGATCACTCGTTTCCTGCGAGTGTGAGTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: AILNCHLPWVVSHIR*LPSDHSFPASVSVS Trigger: AGAAACACTCACACTCGCAGGAAACGAGTGATCGGAGGGAAGCCAGCGAATGTGGGAGACTACCCATGGCAGGTGGCAATTAAGGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 90 bp | GCCACCACAGGTGATTCTTTGGCCATCCTTAATTGCCACCTGCCATaGGTAGTCTCCCACATTCGCTGGCTTCCCTCCGATCACTCGTTT | + |
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Preference number: 5 (lower is better) Translates to: ATTGDSLAILNCHLP*VVSHIRWLPSDHSF Trigger: AAACGAGTGATCGGAGGGAAGCCAGCGAATGTGGGAGACTACCCATGGCAGGTGGCAATTAAGGATGGCCAAAGAATCACCTGTGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 90 bp | CTGAGGAATGTGCTTCCCATTCACACACTGGAAGGACAGACTCGTTaGGAAATCTGCATCCTGCTTGTAACACACTACCCCCGCCAAGCC | + |
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Preference number: 5 (lower is better) Translates to: LRNVLPIHTLEGQTR*EICILLVTHYPRQA Trigger: GGCTTGGCGGGGGTAGTGTGTTACAAGCAGGATGCAGATTTCCCAACGAGTCTGTCCTTCCAGTGTGTGAATGGGAAGCACATTCCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS GCA 90 bp | GTGCTTCCCATTCACACACTGGAAGGACAGACTCGTTGGGAAATCTaGATCCTGCTTGTAACACACTACCCCCGCCAAGCCATTGGACAA | + |
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Preference number: 5 (lower is better) Translates to: VLPIHTLEGQTRWEI*ILLVTHYPRQAIGQ Trigger: TTGTCCAATGGCTTGGCGGGGGTAGTGTGTTACAAGCAGGATGCAGATTTCCCAACGAGTCTGTCCTTCCAGTGTGTGAATGGGAAGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS GCA 90 bp | ACCGATATAAATGCCACCACAGGTGATTCTTTGGCCATCCTTAATTaGCACCTGCCATGGGTAGTCTCCCACATTCGCTGGCTTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: TDINATTGDSLAILN*HLPWVVSHIRWLPS Trigger: GGAGGGAAGCCAGCGAATGTGGGAGACTACCCATGGCAGGTGGCAATTAAGGATGGCCAAAGAATCACCTGTGGTGGCATTTATATCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 90 bp | GGGAGTTTGCAGATACAGGTGCCTTCGATACATCTCTGCCACGGCTaGCAGAAGACCTTGTTACAGGAGCGATGCGTGTATTTCTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: GSLQIQVPSIHLCHG*QKTLLQERCVYFCS Trigger: ACTGCAGAAATACACGCATCGCTCCTGTAACAAGGTCTTCTGCCAGCCGTGGCAGAGATGTATCGAAGGCACCTGTATCTGCAAACTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS TCA 90 bp | CCCACATTCGCTGGCTTCCCTCCGATCACTCGTTTCCTGCGAGTGTaGGTGTTTCTTTTGACTCCACAGGAGAGTTTAGGTAATAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: PTFAGFPPITRFLRV*VFLLTPQESLGNKD Trigger: GTCCTTATTACCTAAACTCTCCTGTGGAGTCAAAAGAAACACTCACACTCGCAGGAAACGAGTGATCGGAGGGAAGCCAGCGAATGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 90 bp | GTTGGAACAGATATGGAGACCACGGGACGCAGGCAGGGACGGAATTaGGGAGTTCACATTCTTTCTTGCCCGTGTGCATTTTCATTTCAA | + |
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Preference number: 5 (lower is better) Translates to: VGTDMETTGRRQGRN*GVHILSCPCAFSFQ Trigger: TTGAAATGAAAATGCACACGGGCAAGAAAGAATGTGAACTCCCCAATTCCGTCCCTGCCTGCGTCCCGTGGTCTCCATATCTGTTCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS TCA 90 bp | TGTTCTGCTGTCGGTCTTCTTCACAACGGCTCTCATCTTCACCAGTaGTGCAGTCCACCTCACCATTACACTTGTATTGGTCTGGAATGC | + |
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Preference number: 5 (lower is better) Translates to: CSAVGLLHNGSHLHQ*CSPPHHYTCIGLEC Trigger: GCATTCCAGACCAATACAAGTGTAATGGTGAGGTGGACTGCATCACTGGTGAAGATGAGAGCCGTTGTGAAGAAGACCGACAGCAGAACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 90 bp | ATTTCCAGATATATTAAAACTTCCTTGTATGTCACGAACACCCAGTaGAAATCCAAGGTCGACGCAGGCCACGTTGGCCTCCGCCATGCT | + |
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Preference number: 5 (lower is better) Translates to: ISRYIKTSLYVTNTQ*KSKVDAGHVGLRHA Trigger: AGCATGGCGGAGGCCAACGTGGCCTGCGTCGACCTTGGATTTCCACTGGGTGTTCGTGACATACAAGGAAGTTTTAATATATCTGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 90 bp | TTCACCAGTGATGCAGTCCACCTCACCATTACACTTGTATTGGTCTaGAATGCAAACTCCCGACTTACAAAGGGAAGCGTTACCTCGGCA | + |
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Preference number: 5 (lower is better) Translates to: FTSDAVHLTITLVLV*NANSRLTKGSVTSA Trigger: TGCCGAGGTAACGCTTCCCTTTGTAAGTCGGGAGTTTGCATTCCAGACCAATACAAGTGTAATGGTGAGGTGGACTGCATCACTGGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 90 bp | TCATCTTCACCAGTGATGCAGTCCACCTCACCATTACACTTGTATTaGTCTGGAATGCAAACTCCCGACTTACAAAGGGAAGCGTTACCT | + |
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Preference number: 5 (lower is better) Translates to: SSSPVMQSTSPLHLY*SGMQTPDLQREALP Trigger: AGGTAACGCTTCCCTTTGTAAGTCGGGAGTTTGCATTCCAGACCAATACAAGTGTAATGGTGAGGTGGACTGCATCACTGGTGAAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS GCA 90 bp | AAGGCACACTCCGCCAAACTGGTCTCTACTCCCCGGCAATGTACATaGAGGCATTCAGTGTCGTTTATATGGAGATTTCCAGATATATTA | + |
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Preference number: 5 (lower is better) Translates to: KAHSAKLVSTPRQCT*RHSVSFIWRFPDIL Trigger: TAATATATCTGGAAATCTCCATATAAACGACACTGAATGCCTGCATGTACATTGCCGGGGAGTAGAGACCAGTTTGGCGGAGTGTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS GCA 72 bp | CTGGGGTGCCAGCCCTTGGGCACTGGTAGGGGAGTTTaGAGATACAGGTGCCTTCGATACATCTCTGCCACG | + |
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Preference number: 6 (lower is better) Translates to: LGCQPLGTGRGV*RYRCLRYISAT Trigger: CGTGGCAGAGATGTATCGAAGGCACCTGTATCTGCAAACTCCCCTACCAGTGCCCAAGGGCTGGCACCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS GCA 72 bp | TCGGGTAGCTCCTTCCATTCATGGCACACACTGGGGTaGCAGCCCTTGGGCACTGGTAGGGGAGTTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGSSFHSWHTLG*QPLGTGRGVCR Trigger: TCTGCAAACTCCCCTACCAGTGCCCAAGGGCTGGCACCCCAGTGTGTGCCATGAATGGAAGGAGCTACCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS CCA 72 bp | CCTTCCATTCATGGCACACACTGGGGTGCCAGCCCTTaGGCACTGGTAGGGGAGTTTGCAGATACAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PSIHGTHWGASP*ALVGEFADTGA Trigger: GGCACCTGTATCTGCAAACTCCCCTACCAGTGCCCAAGGGCTGGCACCCCAGTGTGTGCCATGAATGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS CCA 72 bp | CCAAGGGGCCTCCGGAGTCTCCTTTGCAGGCATCAATaGACCCATCACGCGTACCTGCGCACTGCATCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PRGLRSLLCRHQ*THHAYLRTASL Trigger: AAGAGATGCAGTGCGCAGGTACGCGTGATGGGTCCATTGATGCCTGCAAAGGAGACTCCGGAGGCCCCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 72 bp | GTATGTCGGGTAGCTCCTTCCATTCATGGCACACACTaGGGTGCCAGCCCTTGGGCACTGGTAGGGGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: VCRVAPSIHGTH*GASPWALVGEF Trigger: AAACTCCCCTACCAGTGCCCAAGGGCTGGCACCCCAGTGTGTGCCATGAATGGAAGGAGCTACCCGACATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS CAA 72 bp | TCCTTCCATTCATGGCACACACTGGGGTGCCAGCCCTaGGGCACTGGTAGGGGAGTTTGCAGATACAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SFHSWHTLGCQP*GTGRGVCRYRC Trigger: GCACCTGTATCTGCAAACTCCCCTACCAGTGCCCAAGGGCTGGCACCCCAGTGTGTGCCATGAATGGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS GCA 72 bp | CCCTTGGGCACTGGTAGGGGAGTTTGCAGATACAGGTaGCTTCGATACATCTCTGCCACGGCTGGCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: PLGTGRGVCRYR*LRYISATAGRR Trigger: TCTTCTGCCAGCCGTGGCAGAGATGTATCGAAGGCACCTGTATCTGCAAACTCCCCTACCAGTGCCCAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS CCA 72 bp | AATTGCCACCTGCCATGGGTAGTCTCCCACATTCGCTaGCTTCCCTCCGATCACTCGTTTCCTGCGAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: NCHLPWVVSHIR*LPSDHSFPASV Trigger: CACACTCGCAGGAAACGAGTGATCGGAGGGAAGCCAGCGAATGTGGGAGACTACCCATGGCAGGTGGCAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 72 bp | CGACCCCATCCAGAGATGATACATCTGTCATTCGGTTaGAACAGATATGGAGACCACGGGACGCAGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RPHPEMIHLSFG*NRYGDHGTQAG Trigger: CCCTGCCTGCGTCCCGTGGTCTCCATATCTGTTCCAACCGAATGACAGATGTATCATCTCTGGATGGGGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 72 bp | ACACCCAGTGGAAATCCAAGGTCGACGCAGGCCACGTaGGCCTCCGCCATGCTCCAGCTGTTTTTACATATG | + |
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Preference number: 6 (lower is better) Translates to: TPSGNPRSTQAT*ASAMLQLFLHM Trigger: CATATGTAAAAACAGCTGGAGCATGGCGGAGGCCAACGTGGCCTGCGTCGACCTTGGATTTCCACTGGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS GCA 72 bp | GGGAGTTTGCAGATACAGGTGCCTTCGATACATCTCTaGCACGGCTGGCAGAAGACCTTGTTACAGGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: GSLQIQVPSIHL*HGWQKTLLQER Trigger: TCGCTCCTGTAACAAGGTCTTCTGCCAGCCGTGGCAGAGATGTATCGAAGGCACCTGTATCTGCAAACTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS CCA 72 bp | GGTGATTCTTTGGCCATCCTTAATTGCCACCTGCCATaGGTAGTCTCCCACATTCGCTGGCTTCCCTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: GDSLAILNCHLP*VVSHIRWLPSD Trigger: ATCGGAGGGAAGCCAGCGAATGTGGGAGACTACCCATGGCAGGTGGCAATTAAGGATGGCCAAAGAATCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 90 bp | CCTGAGGAATGTGCTTCCCATTCACACACTGGAAGGACAGACTCGTaGGGAAATCTGCATCCTGCTTGTAACACACTACCCCCGCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: PEECASHSHTGRTDS*GNLHPACNTLPPPS Trigger: GCTTGGCGGGGGTAGTGTGTTACAAGCAGGATGCAGATTTCCCAACGAGTCTGTCCTTCCAGTGTGTGAATGGGAAGCACATTCCTCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS GCA 72 bp | ATTCACACACTGGAAGGACAGACTCGTTGGGAAATCTaGATCCTGCTTGTAACACACTACCCCCGCCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: IHTLEGQTRWEI*ILLVTHYPRQA Trigger: GGCTTGGCGGGGGTAGTGTGTTACAAGCAGGATGCAGATTTCCCAACGAGTCTGTCCTTCCAGTGTGTGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS GCA 72 bp | AATGCCACCACAGGTGATTCTTTGGCCATCCTTAATTaGCACCTGCCATGGGTAGTCTCCCACATTCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: NATTGDSLAILN*HLPWVVSHIRW Trigger: CCAGCGAATGTGGGAGACTACCCATGGCAGGTGGCAATTAAGGATGGCCAAAGAATCACCTGTGGTGGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 72 bp | CAGATACAGGTGCCTTCGATACATCTCTGCCACGGCTaGCAGAAGACCTTGTTACAGGAGCGATGCGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: QIQVPSIHLCHG*QKTLLQERCVY Trigger: ATACACGCATCGCTCCTGTAACAAGGTCTTCTGCCAGCCGTGGCAGAGATGTATCGAAGGCACCTGTATCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS CAA 72 bp | CCCGACTTACAAAGGGAAGCGTTACCTCGGCAACCTTaGCAACACAGCTCATCGCTTTGGTCTCCACAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PDLQREALPRQP*QHSSSLWSPQS Trigger: TGACTGTGGAGACCAAAGCGATGAGCTGTGTTGCAAAGGTTGCCGAGGTAACGCTTCCCTTTGTAAGTCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 90 bp | ATGTCACGAACACCCAGTGGAAATCCAAGGTCGACGCAGGCCACGTaGGCCTCCGCCATGCTCCAGCTGTTTTTACATATGAACATTCTC | + |
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Preference number: 6 (lower is better) Translates to: MSRTPSGNPRSTQAT*ASAMLQLFLHMNIL Trigger: GAGAATGTTCATATGTAAAAACAGCTGGAGCATGGCGGAGGCCAACGTGGCCTGCGTCGACCTTGGATTTCCACTGGGTGTTCGTGACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 90 bp | GGTTGGAACAGATATGGAGACCACGGGACGCAGGCAGGGACGGAATaGGGGAGTTCACATTCTTTCTTGCCCGTGTGCATTTTCATTTCA | + |
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Preference number: 6 (lower is better) Translates to: GWNRYGDHGTQAGTE*GSSHSFLPVCIFIS Trigger: TGAAATGAAAATGCACACGGGCAAGAAAGAATGTGAACTCCCCAATTCCGTCCCTGCCTGCGTCCCGTGGTCTCCATATCTGTTCCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS TCA 72 bp | TCTCCACAGTCATTGACACCGTTGCAGGCTTTCTCCTaGGGAATGTGCTTCCCATTCACACACTGGAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: SPQSLTPLQAFS*GMCFPFTHWKD Trigger: GTCCTTCCAGTGTGTGAATGGGAAGCACATTCCTCAGGAGAAAGCCTGCAACGGTGTCAATGACTGTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS GCA 72 bp | CCGACTTACAAAGGGAAGCGTTACCTCGGCAACCTTTaGAACACAGCTCATCGCTTTGGTCTCCACAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: PTYKGKRYLGNL*NTAHRFGLHSH Trigger: ATGACTGTGGAGACCAAAGCGATGAGCTGTGTTGCAAAGGTTGCCGAGGTAACGCTTCCCTTTGTAAGTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 90 bp | CGGCTCTCATCTTCACCAGTGATGCAGTCCACCTCACCATTACACTaGTATTGGTCTGGAATGCAAACTCCCGACTTACAAAGGGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: RLSSSPVMQSTSPLH*YWSGMQTPDLQREA Trigger: CGCTTCCCTTTGTAAGTCGGGAGTTTGCATTCCAGACCAATACAAGTGTAATGGTGAGGTGGACTGCATCACTGGTGAAGATGAGAGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 72 bp | TGTGCTTCCCATTCACACACTGGAAGGACAGACTCGTaGGGAAATCTGCATCCTGCTTGTAACACACTACCC | + |
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Preference number: 6 (lower is better) Translates to: CASHSHTGRTDS*GNLHPACNTLP Trigger: GGGTAGTGTGTTACAAGCAGGATGCAGATTTCCCAACGAGTCTGTCCTTCCAGTGTGTGAATGGGAAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 72 bp | ACAGCCACCGATATAAATGCCACCACAGGTGATTCTTaGGCCATCCTTAATTGCCACCTGCCATGGGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: TATDINATTGDS*AILNCHLPWVV Trigger: GACTACCCATGGCAGGTGGCAATTAAGGATGGCCAAAGAATCACCTGTGGTGGCATTTATATCGGTGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 90 bp | CAGAATCCAACAGCCACCGATATAAATGCCACCACAGGTGATTCTTaGGCCATCCTTAATTGCCACCTGCCATGGGTAGTCTCCCACATT | + |
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Preference number: 6 (lower is better) Translates to: QNPTATDINATTGDS*AILNCHLPWVVSHI Trigger: AATGTGGGAGACTACCCATGGCAGGTGGCAATTAAGGATGGCCAAAGAATCACCTGTGGTGGCATTTATATCGGTGGCTGTTGGATTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS TCA 72 bp | GTCGGTCTTCTTCACAACGGCTCTCATCTTCACCAGTaGTGCAGTCCACCTCACCATTACACTTGTATTGGT | + |
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Preference number: 6 (lower is better) Translates to: VGLLHNGSHLHQ*CSPPHHYTCIG Trigger: ACCAATACAAGTGTAATGGTGAGGTGGACTGCATCACTGGTGAAGATGAGAGCCGTTGTGAAGAAGACCGAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 72 bp | TATATTAAAACTTCCTTGTATGTCACGAACACCCAGTaGAAATCCAAGGTCGACGCAGGCCACGTTGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: YIKTSLYVTNTQ*KSKVDAGHVGL Trigger: GAGGCCAACGTGGCCTGCGTCGACCTTGGATTTCCACTGGGTGTTCGTGACATACAAGGAAGTTTTAATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 90 bp | CTCATCTTCACCAGTGATGCAGTCCACCTCACCATTACACTTGTATaGGTCTGGAATGCAAACTCCCGACTTACAAAGGGAAGCGTTACC | + |
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Preference number: 6 (lower is better) Translates to: LIFTSDAVHLTITLV*VWNANSRLTKGSVT Trigger: GGTAACGCTTCCCTTTGTAAGTCGGGAGTTTGCATTCCAGACCAATACAAGTGTAATGGTGAGGTGGACTGCATCACTGGTGAAGATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS TCA 72 bp | GAGAGCAGTTGCCTATTAGATCAACTTCGCCCCACCTaGGTGAGTAGACTTTTTGGTTATCTTTCCCTCGAC | + |
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Preference number: 6 (lower is better) Translates to: ESSCLLDQLRPT*VSRLFGYLSLD Trigger: GTCGAGGGAAAGATAACCAAAAAGTCTACTCACTCAGGTGGGGCGAAGTTGATCTAATAGGCAACTGCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS GCA 72 bp | AGTCCACCTCACCATTACACTTGTATTGGTCTGGAATaGAAACTCCCGACTTACAAAGGGAAGCGTTACCTC | + |
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Preference number: 6 (lower is better) Translates to: SPPHHYTCIGLE*KLPTYKGKRYL Trigger: GAGGTAACGCTTCCCTTTGTAAGTCGGGAGTTTGCATTCCAGACCAATACAAGTGTAATGGTGAGGTGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 72 bp | GATGCAGTCCACCTCACCATTACACTTGTATTGGTCTaGAATGCAAACTCCCGACTTACAAAGGGAAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: DAVHLTITLVLV*NANSRLTKGSV Trigger: AACGCTTCCCTTTGTAAGTCGGGAGTTTGCATTCCAGACCAATACAAGTGTAATGGTGAGGTGGACTGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CCA 72 bp | CCAGTGATGCAGTCCACCTCACCATTACACTTGTATTaGTCTGGAATGCAAACTCCCGACTTACAAAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: PVMQSTSPLHLY*SGMQTPDLQRE Trigger: TTCCCTTTGTAAGTCGGGAGTTTGCATTCCAGACCAATACAAGTGTAATGGTGAGGTGGACTGCATCACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 72 bp | ACCAGTGATGCAGTCCACCTCACCATTACACTTGTATaGGTCTGGAATGCAAACTCCCGACTTACAAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: TSDAVHLTITLV*VWNANSRLTKG Trigger: TCCCTTTGTAAGTCGGGAGTTTGCATTCCAGACCAATACAAGTGTAATGGTGAGGTGGACTGCATCACTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS TCA 72 bp | TGTTTCTTCAGTTTCAATTTCAGCTTCTCCTTGAGCTaGCCGTGCAAGGCCTTTTGGAATGTTCTGCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: CFFSFNFSFSLS*PCKAFWNVLLS Trigger: CGACAGCAGAACATTCCAAAAGGCCTTGCACGGTCAGCTCAAGGAGAAGCTGAAATTGAAACTGAAGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 72 bp | TCTTCACCAGTGATGCAGTCCACCTCACCATTACACTaGTATTGGTCTGGAATGCAAACTCCCGACTTACAA | + |
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Preference number: 6 (lower is better) Translates to: SSPVMQSTSPLH*YWSGMQTPDLQ Trigger: TTGTAAGTCGGGAGTTTGCATTCCAGACCAATACAAGTGTAATGGTGAGGTGGACTGCATCACTGGTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 72 bp | CAGGCAGGGACGGAATTGGGGAGTTCACATTCTTTCTaGCCCGTGTGCATTTTCATTTCAATCAAAGCTATG | + |
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Preference number: 6 (lower is better) Translates to: QAGTELGSSHSF*PVCIFISIKAM Trigger: CATAGCTTTGATTGAAATGAAAATGCACACGGGCAAGAAAGAATGTGAACTCCCCAATTCCGTCCCTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS TCA 72 bp | TTCCTTCAGCTGCGCACGTTCCATTATGTGAAAACTTaGTCTCTGGGTGAAGACATTCGAAACTCTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: FLQLRTFHYVKT*SLGEDIRNSSG Trigger: ACCAGAAGAGTTTCGAATGTCTTCACCCAGAGATCAAGTTTTCACATAATGGAACGTGCGCAGCTGAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS GCA 72 bp | AGGCAGGGACGGAATTGGGGAGTTCACATTCTTTCTTaGCCGTGTGCATTTTCATTTCAATCAAAGCTATGT | + |
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Preference number: 6 (lower is better) Translates to: RQGRNWGVHILS*PCAFSFQSKLC Trigger: ACATAGCTTTGATTGAAATGAAAATGCACACGGGCAAGAAAGAATGTGAACTCCCCAATTCCGTCCCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS CAA 72 bp | GCTCCAGCTGTTTTTACATATGAACATTCTCTCATCTaGGTCCACAAGTTTGACTTGAACAAGTCCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: APAVFTYEHSLI*VHKFDLNKSLC Trigger: ACAGAGGGACTTGTTCAAGTCAAACTTGTGGACCAAGATGAGAGAATGTTCATATGTAAAAACAGCTGGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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| CDS TCA 72 bp | ATTAAACTTTCCTTCAGCTGCGCACGTTCCATTATGTaGAAACTTGATCTCTGGGTGAAGACATTCGAAACT | + |
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Preference number: 6 (lower is better) Translates to: IKLSFSCARSIM*KLDLWVKTFET Trigger: AGTTTCGAATGTCTTCACCCAGAGATCAAGTTTTCACATAATGGAACGTGCGCAGCTGAAGGAAAGTTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077918.7 ENSMUST00000200206.5 |
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| CDS CAA 72 bp | GTTTATATGGAGATTTCCAGATATATTAAAACTTCCTaGTATGTCACGAACACCCAGTGGAAATCCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: VYMEISRYIKTS*YVTNTQWKSKV Trigger: GACCTTGGATTTCCACTGGGTGTTCGTGACATACAAGGAAGTTTTAATATATCTGGAAATCTCCATATAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077918.7 |
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