Pregenerated sensors for CFH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026365Ensembl transcript IDs: ENSMUST00000066859.13, ENSMUST00000111976.9, ENSMUST00000111977.8, ENSMUST00000123238.2, ENSMUST00000192880.6, ENSMUST00000192919.6
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCAGCCCACATTTCCCTGTaGAGTCTAAGGAGAAAACAT | + |
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Preference number: 3 (lower is better) Translates to: STDDNGSYTGNDKEVMSPAHISL*SLRRKH Trigger: ATGTTTTCTCCTTAGACTCAACAGGGAAATGTGGGC...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| 3UTR TCA 72 bp | GATGGTGCCATTAATGCACTTTGTACGAAATGGCGGTaGATCTCTTGCTTTATAATATCCATATTTACATCC | + |
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Preference number: 3 (lower is better) Translates to: DGAINALCTKWR*ISCFIISIFTS Trigger: GGATGTAAATATGGATATTATAAAGCAAGAGATTCACCGCCATTTCGTACAAAGTGCATTAATGGCACCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| 3UTR CCA 72 bp | AATGGTTTTAAGAGAGGTGATAGACCCAACATCACATaGAAAAATTGGATTGCAACTGTACAATGGATGCAA | + |
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Preference number: 3 (lower is better) Translates to: NGFKRGDRPNIT*KNWIATVQWMQ Trigger: TTGCATCCATTGTACAGTTGCAATCCAATTTTTCCATGTGATGTTGGGTCTATCACCTCTCTTAAAACCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR GCA 90 bp | TTTTTGTCAGCATCATGTCTGCCTGGACACTGTCATACTTTCCACCATGATGATGGTGTGTCTCCGGGATaGCCACAAGGCTTTTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: FLSASCLPGHCHTFHHDDGVSPG*PQGFFR Trigger: TCGGAAAAAGCCTTGTGGGCATCCCGGAGACACACC...ATCATCATGGTGGAAAGTATGACAGTGTCCAGGCAGACATGATGCTGACAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR GCA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCATGGGTATTTGGAATCTaGGGTGGAGGAGGGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSGITHACKHVGGSDHFPWVFGI*GGGGQD Trigger: ATCCTGCCCTCCTCCACCGCAGATTCCAAATACCCA...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR GCA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCAGGTGTGTCTCCGGGATaGCCACAAGGCTTTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: STDDNGSYTGNDKEVMSPGVSPG*PQGFFR Trigger: TCGGAAAAAGCCTTGTGGGCATCCCGGAGACACACC...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR TCA 90 bp | TGTGAATTAATATGTAGAGATGTCAGCCTTTTTGTCAGCATCATGTCTGCCTGGGCACCAAACTCAAATTaGGATCCAACTGCCAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CELICRDVSLFVSIMSAWAPNSN*DPTASL Trigger: TAGGCTGGCAGTTGGATCTCAATTTGAGTTTGGTGC...CCAGGCAGACATGATGCTGACAAAAAGGCTGACATCTCTACATATTAATTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGGTGTGTCTCCGGGATaGCCACAAGGCTTTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQGVSPG*PQGFFR Trigger: TCGGAAAAAGCCTTGTGGGCATCCCGGAGACACACC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS-3UTR GCA 90 bp | TTAATATGTAGAGATGTCAGCCTTTTTGTCAGCATCATGTCTGCCTGGACACTGATTGATCCACCCATCTaGACCACATTCACGGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: LICRDVSLFVSIMSAWTLIDPPI*TTFTVI Trigger: GATTACCGTGAATGTGGTGCAGATGGGTGGATCAAT...CAGTGTCCAGGCAGACATGATGCTGACAAAAAGGCTGACATCTCTACATATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR GCA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCATTCCTGGTCTGTTTCTaGTGCACCACTCACAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSGITHACKHVGGSDHFPFLVCF*CTTHNS Trigger: AGAATTGTGAGTGGTGCAGCAGAAACAGACCAGGAA...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR GCA 90 bp | TTAATATGTAGAGATGTCAGCCTTTTTGTCAGCATCATGTCTGCCTGGACACTGTTCCTGGTCTGTTTCTaGTGCACCACTCACAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LICRDVSLFVSIMSAWTLFLVCF*CTTHNS Trigger: AGAATTGTGAGTGGTGCAGCAGAAACAGACCAGGAA...CAGTGTCCAGGCAGACATGATGCTGACAAAAAGGCTGACATCTCTACATATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR GCA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCAGAGGGCAGGATGTTTTaGTTGTACAGTTTGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSGITHACKHVGGSDHFPEGRMF*LYSLVQ Trigger: CTGAACCAAACTGTACAAGCAAAACATCCTGCCCTC...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCACATCCCCTCTTTCTTTaGGCACATAACCATGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSGITHACKHVGGSDHFPHPLFL*AHNHAY Trigger: GTAAGCATGGTTATGTGCCCAAAGAAAGAGGGGATG...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCACATGTTCATGACTGCTaGACTCAATGGAATCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSGITHACKHVGGSDHFPHVHDC*TQWNLS Trigger: GGAGAGATTCCATTGAGTCCAGCAGTCATGAACATG...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR TCA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCATTCAATCTTGAAGCCTaGATTGCATTCAAACCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSGITHACKHVGGSDHFPFNLEA*IAFKPH Trigger: GTGCGGTTTGAATGCAATTCAGGCTTCAAGATTGAA...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR TCA 90 bp | TTTAAGAGAGGTGATAGACCCAACATCACATGGAAAAATTGGATTGCAACTGTATCTTCACAGAAAGGCTaGGAACTCCATCCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKRGDRPNITWKNWIATVSSQKG*ELHPEP Trigger: AGGCTCTGGATGGAGTTCTCAGCCTTTCTGTGAAGA...TACAGTTGCAATCCAATTTTTCCATGTGATGTTGGGTCTATCACCTCTCTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTGGGTATTTGGAATCTaGGGTGGAGGAGGGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQWVFGI*GGGGQD Trigger: ATCCTGCCCTCCTCCACCGCAGATTCCAAATACCCA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS-3UTR CCA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCAATTTTCCACTCGCGGTaGTGTGCAGAGAATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: STDDNGSYTGNDKEVMSPIFHSR*CAENFH Trigger: GTGGAAATTCTCTGCACACCACCGCGAGTGGAAAAT...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCAACTCTGTGTCCTGAATaGCAGGAGAATTCCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSGITHACKHVGGSDHFPTLCPE*QENSNK Trigger: TTTGTTGGAATTCTCCTGCCATTCAGGACACAGAGT...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR CCA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCAAATCACTTGGGTATTTaGAATCTGCGGTGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: STDDNGSYTGNDKEVMSPNHLGI*NLRWRR Trigger: CCTCCTCCACCGCAGATTCCAAATACCCAAGTGATT...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCAATTATCTTTGCATACTaGCTGTCCAATCCACCGACT | + |
|
Preference number: 4 (lower is better) Translates to: FSGITHACKHVGGSDHFPIIFAY*LSNPPT Trigger: AGTCGGTGGATTGGACAGCCAGTATGCAAAGATAAT...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR CCA 90 bp | TTAATATGTAGAGATGTCAGCCTTTTTGTCAGCATCATGTCTGCCTGGACACTGATTATCTTTGCATACTaGCTGTCCAATCCACCGACT | + |
|
Preference number: 4 (lower is better) Translates to: LICRDVSLFVSIMSAWTLIIFAY*LSNPPT Trigger: AGTCGGTGGATTGGACAGCCAGTATGCAAAGATAAT...CAGTGTCCAGGCAGACATGATGCTGACAAAAAGGCTGACATCTCTACATATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR CCA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCACAGACCTCGGCACTTTaGTTTTTCTGTCCATATCCC | + |
|
Preference number: 4 (lower is better) Translates to: STDDNGSYTGNDKEVMSPQTSAL*FFCPYP Trigger: GGGATATGGACAGAAAAACCAAAGTGCCGAGGTCTG...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR TCA 90 bp | TTTGAAATTTTCTATGCTGACACTATGCTCAGTGCGACACATTTTCTTCTGCTGATAGTGGAATATCATTaGTCCACCCATCTGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FEIFYADTMLSATHFLLLIVEYH*STHLHH Trigger: GTGGTGCAGATGGGTGGATCAATGATATTCCACTAT...CAGCAGAAGAAAATGTGTCGCACTGAGCATAGTGTCAGCATAGAAAATTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTCTTCACAGAAAGGCTaGGAACTCCATCCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQSSQKG*ELHPEP Trigger: AGGCTCTGGATGGAGTTCTCAGCCTTTCTGTGAAGA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS-3UTR TCA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCAACTAATGCAAGAAACTaGCCCATGTCCAATCATTGT | + |
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Preference number: 4 (lower is better) Translates to: FSGITHACKHVGGSDHFPTNARN*PMSNHC Trigger: ACAATGATTGGACATGGGTCAGTTTCTTGCATTAGT...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR TCA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCAGTAGTTCCATGTTCATaGCTGCTGGACTCAATGGAA | + |
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Preference number: 4 (lower is better) Translates to: STDDNGSYTGNDKEVMSPVVPCS*LLDSME Trigger: TTCCATTGAGTCCAGCAGTCATGAACATGGAACTAC...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCCCACATTTCCCTGTTaGGTCTTTGCATACTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQPTFPC*VFAYWL Trigger: CAGCCAGTATGCAAAGACTCAACAGGGAAATGTGGG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192919.6 |
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| CDS-3UTR GCA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCAATTGATCCACCCATCTaGACCACATTCACGGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: STDDNGSYTGNDKEVMSPIDPPI*TTFTVI Trigger: GATTACCGTGAATGTGGTGCAGATGGGTGGATCAAT...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCAGCGAGGTAATGACTaGCACCTTCCATCTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQQRGND*HLPSLH Trigger: GTGCAAAGATGGAAGGTGGCAGTCATTACCTCGCTG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS-3UTR CCA 90 bp | TTTAAGAGAGGTGATAGACCCAACATCACATGGAAAAATTGGATTGCAACTGTAATTTTCCACTCGCGGTaGTGTGCAGAGAATTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FKRGDRPNITWKNWIATVIFHSR*CAENFH Trigger: GTGGAAATTCTCTGCACACCACCGCGAGTGGAAAAT...TACAGTTGCAATCCAATTTTTCCATGTGATGTTGGGTCTATCACCTCTCTTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGCACCAAACTCAAATTaGGATCCAACTGCCAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQAPNSN*DPTASL Trigger: TAGGCTGGCAGTTGGATCTCAATTTGAGTTTGGTGC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS-3UTR TCA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGGCACCAAACTCAAATTaGGATCCAACTGCCAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: MILYTSGIIDGAINALCTAPNSN*DPTASL Trigger: TAGGCTGGCAGTTGGATCTCAATTTGAGTTTGGTGC...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR TCA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCATATGTCCTTCAATCTTaGAGCCTGAATTGCATTCAA | + |
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Preference number: 4 (lower is better) Translates to: FSGITHACKHVGGSDHFPYVLQS*SLNCIQ Trigger: TTGAATGCAATTCAGGCTTCAAGATTGAAGGACATA...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR TCA 90 bp | TTAATATGTAGAGATGTCAGCCTTTTTGTCAGCATCATGTCTGCCTGGACACTGCCATTTTCTGAGCAATaGATTTCCTTATGTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LICRDVSLFVSIMSAWTLPFSEQ*ISLCPS Trigger: TGAAGGACATAAGGAAATTCATTGCTCAGAAAATGG...CAGTGTCCAGGCAGACATGATGCTGACAAAAAGGCTGACATCTCTACATATTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR TCA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCATTCTCTTTCATAACATaGGGGTGTATCAGACCATCC | + |
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Preference number: 4 (lower is better) Translates to: STDDNGSYTGNDKEVMSPFSFIT*GCIRPS Trigger: GGATGGTCTGATACACCCTCATGTTATGAAAGAGAA...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGACAAATGAACTCCACTaGATCTCCATGGTGGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQTNELH*ISMVVG Trigger: CCCTACCACCATGGAGATTCAGTGGAGTTCATTTGT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTTGACCTGCATAACATaGGGGTGTATCAGACCATCC | + |
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Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQLTCIT*GCIRPS Trigger: GGATGGTCTGATACACCCTCATGTTATGCAGGTCAA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111977.8 |
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| CDS-3UTR GCA 90 bp | TTTGAAATTTTCTATGCTGACACTATGCTCAGTGCGACACATTTTCTTCTGCTGATCGTGGCTTTTCATTaGTCCAAAGGCCATTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FEIFYADTMLSATHFLLLIVAFH*SKGHFL Trigger: CAGAAAATGGCCTTTGGAGCAATGAAAAGCCACGAT...CAGCAGAAGAAAATGTGTCGCACTGAGCATAGTGTCAGCATAGAAAATTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR GCA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCATACTTTTTCCCAGTATaGAGAGTCTCCATTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: STDDNGSYTGNDKEVMSPYFFPV*RVSILH Trigger: GTGGAGAATGGAGACTCTGCATACTGGGAAAAAGTA...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR GCA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCACACATCACTTCCACTTaGCCAAATAGTTCCAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: STDDNGSYTGNDKEVMSPHITST*PNSSKG Trigger: ACCTTTGGAACTATTTGGGCAAGTGGAAGTGATGTG...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTCCCTGTTGAGTCTTTaGATACTGGCTGTCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQSLLSL*ILAVQS Trigger: GGATTGGACAGCCAGTATGCAAAGACTCAACAGGGA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192919.6 |
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| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGATTTTCCACTCGCGGTaGTGTGCAGAGAATTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQIFHSR*CAENFH Trigger: GTGGAAATTCTCTGCACACCACCGCGAGTGGAAAAT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS-3UTR CCA 90 bp | TTTAAGAGAGGTGATAGACCCAACATCACATGGAAAAATTGGATTGCAACTGTATTTCAAGGTACATCTTaGAACAGGGATCCAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: FKRGDRPNITWKNWIATVFQGTS*NRDPAS Trigger: ACTGGCTGGATCCCTGTTCCAAGATGTACCTTGAAA...TACAGTTGCAATCCAATTTTTCCATGTGATGTTGGGTCTATCACCTCTCTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR CCA 90 bp | CTGCCTGGACACTGTCATACTTTCCACCATGATGATAATGGGCTAAATATATTAATTTCCTATAGATACTaGGAAGTTGGGTCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGHCHTFHHDDNGLNILISYRY*EVGSQA Trigger: AGCCTGAGACCCAACTTCCCAGTATCTATAGGAAAT...TAATATATTTAGCCCATTATCATCATGGTGGAAAGTATGACAGTGTCCAGGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGATTTGGAATCTGCGGTaGAGGAGGGCAGGATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQIWNLR*RRAGCF Trigger: AAAACATCCTGCCCTCCTCCACCGCAGATTCCAAAT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGAATCACTTGGGTATTTaGAATCTGCGGTGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQNHLGI*NLRWRR Trigger: CCTCCTCCACCGCAGATTCCAAATACCCAAGTGATT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CCA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCAGTGGTTTCAATCACTTaGGTATTTGGAATCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: STDDNGSYTGNDKEVMSPVVSIT*VFGICG Trigger: ACCGCAGATTCCAAATACCCAAGTGATTGAAACCAC...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGATAGTGGAATATCATTaGTCCACCCATCTGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQIVEYH*STHLHH Trigger: GTGGTGCAGATGGGTGGATCAATGATATTCCACTAT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR TCA 90 bp | TTTAAGAGAGGTGATAGACCCAACATCACATGGAAAAATTGGATTGCAACTGTATTCAATCTTGAAGCCTaGATTGCATTCAAACCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FKRGDRPNITWKNWIATVFNLEA*IAFKPH Trigger: GTGCGGTTTGAATGCAATTCAGGCTTCAAGATTGAA...TACAGTTGCAATCCAATTTTTCCATGTGATGTTGGGTCTATCACCTCTCTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
||
| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGTAGTTCCATGTTCATaGCTGCTGGACTCAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQVVPCS*LLDSME Trigger: TTCCATTGAGTCCAGCAGTCATGAACATGGAACTAC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 |
||
| CDS-3UTR TCA 90 bp | GAGACAAGTTTTGAAATTTTCTATGCTGACACTATGCTCAGTGCGACACATTTTAAGGAGATTGACATCTaGATGTCACTTGTTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETSFEIFYADTMLSATHFKEIDI*MSLVLL Trigger: CAGGAGAACAAGTGACATTCAGATGTCAATCTCCTT...AAAATGTGTCGCACTGAGCATAGTGTCAGCATAGAAAATTTCAAAACTTGTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
||
| CDS-3UTR GCA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCAGGTATAAACAACCTTTaGACCAAACTCAAATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSGITHACKHVGGSDHFPGINNL*TKLKLR Trigger: TCTCAATTTGAGTTTGGTGCAAAGGTTGTTTATACC...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR GCA 90 bp | TTAATATGTAGAGATGTCAGCCTTTTTGTCAGCATCATGTCTGCCTGGACACTGGGTATAAACAACCTTTaGACCAAACTCAAATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LICRDVSLFVSIMSAWTLGINNL*TKLKLR Trigger: TCTCAATTTGAGTTTGGTGCAAAGGTTGTTTATACC...CAGTGTCCAGGCAGACATGATGCTGACAAAAAGGCTGACATCTCTACATATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
||
| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGATTGATCCACCCATCTaGACCACATTCACGGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQIDPPI*TTFTVI Trigger: GATTACCGTGAATGTGGTGCAGATGGGTGGATCAAT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTTCCTGGTCTGTTTCTaGTGCACCACTCACAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQFLVCF*CTTHNS Trigger: AGAATTGTGAGTGGTGCAGCAGAAACAGACCAGGAA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR GCA 90 bp | GAGACAAGTTTTGAAATTTTCTATGCTGACACTATGCTCAGTGCGACACATTTTTACTTTTTCCCAGTATaGAGAGTCTCCATTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ETSFEIFYADTMLSATHFYFFPV*RVSILH Trigger: GTGGAGAATGGAGACTCTGCATACTGGGAAAAAGTA...AAAATGTGTCGCACTGAGCATAGTGTCAGCATAGAAAATTTCAAAACTTGTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
||
| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGAGGGCAGGATGTTTTaGTTGTACAGTTTGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQEGRMF*LYSLVQ Trigger: CTGAACCAAACTGTACAAGCAAAACATCCTGCCCTC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGCCACCTTCCATCTTTaGACACCATTTCTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQATFHL*TPFLLS Trigger: ACTCAGAAGAAATGGTGTGCAAAGATGGAAGGTGGC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCATCCCCTCTTTCTTTaGGCACATAACCATGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQHPLFL*AHNHAY Trigger: GTAAGCATGGTTATGTGCCCAAAGAAAGAGGGGATG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 ENSMUST00000192919.6 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTTTCAAGGTACATCTTaGAACAGGGATCCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQFQGTS*NRDPAS Trigger: ACTGGCTGGATCCCTGTTCCAAGATGTACCTTGAAA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCATGTTCATGACTGCTaGACTCAATGGAATCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQHVHDC*TQWNLS Trigger: GGAGAGATTCCATTGAGTCCAGCAGTCATGAACATG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 |
||
| CDS-3UTR CCA 90 bp | GAGACAAGTTTTGAAATTTTCTATGCTGACACTATGCTCAGTGCGACACATTTTATTTGGCACATGTGGTaGATCCACACAGGAATTATC | + |
|
Preference number: 4 (lower is better) Translates to: ETSFEIFYADTMLSATHFIWHMW*IHTGII Trigger: GATAATTCCTGTGTGGATCCACCACATGTGCCAAAT...AAAATGTGTCGCACTGAGCATAGTGTCAGCATAGAAAATTTCAAAACTTGTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
||
| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTTCAATCTTGAAGCCTaGATTGCATTCAAACCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQFNLEA*IAFKPH Trigger: GTGCGGTTTGAATGCAATTCAGGCTTCAAGATTGAA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR TCA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCACCATTTTCTGAGCAATaGATTTCCTTATGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STDDNGSYTGNDKEVMSPPFSEQ*ISLCPS Trigger: TGAAGGACATAAGGAAATTCATTGCTCAGAAAATGG...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTTCTCTTTCATAACATaGGGGTGTATCAGACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQFSFIT*GCIRPS Trigger: GGATGGTCTGATACACCCTCATGTTATGAAAGAGAA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGAAGGAGATTGACATCTaGATGTCACTTGTTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQKEIDI*MSLVLL Trigger: CAGGAGAACAAGTGACATTCAGATGTCAATCTCCTT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 ENSMUST00000192919.6 |
||
| CDS-3UTR TCA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGAAGGAGATTGACATCTaGATGTCACTTGTTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MILYTSGIIDGAINALCTKEIDI*MSLVLL Trigger: CAGGAGAACAAGTGACATTCAGATGTCAATCTCCTT...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGAAATTGAGATCCAACTaGCAGCCTAAAGGACCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQKLRSN*QPKGPK Trigger: TTTGGGTCCTTTAGGCTGGCAGTTGGATCTCAATTT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR GCA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGAAATTGAGATCCAACTaGCAGCCTAAAGGACCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MILYTSGIIDGAINALCTKLRSN*QPKGPK Trigger: TTTGGGTCCTTTAGGCTGGCAGTTGGATCTCAATTT...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGATCGTGGCTTTTCATTaGTCCAAAGGCCATTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQIVAFH*SKGHFL Trigger: CAGAAAATGGCCTTTGGAGCAATGAAAAGCCACGAT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR GCA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGATCGTGGCTTTTCATTaGTCCAAAGGCCATTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MILYTSGIIDGAINALCTIVAFH*SKGHFL Trigger: CAGAAAATGGCCTTTGGAGCAATGAAAAGCCACGAT...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTACTTTTTCCCAGTATaGAGAGTCTCCATTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQYFFPV*RVSILH Trigger: GTGGAGAATGGAGACTCTGCATACTGGGAAAAAGTA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 ENSMUST00000192919.6 |
||
| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTTCCATGTTCATGACTaGTGGACTCAATGGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQFHVHD*WTQWNL Trigger: GAGATTCCATTGAGTCCAGCAGTCATGAACATGGAA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 |
||
| CDS-3UTR GCA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGTTCCATGTTCATGACTaGTGGACTCAATGGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: MILYTSGIIDGAINALCTFHVHD*WTQWNL Trigger: GAGATTCCATTGAGTCCAGCAGTCATGAACATGGAA...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCACAGGAATTATCTTTaGATACTGGCTGTCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQHRNYL*ILAVQS Trigger: GGATTGGACAGCCAGTATGCAAAGATAATTCCTGTG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR GCA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGCACAGGAATTATCTTTaGATACTGGCTGTCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: MILYTSGIIDGAINALCTHRNYL*ILAVQS Trigger: GGATTGGACAGCCAGTATGCAAAGATAATTCCTGTG...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCACATCACTTCCACTTaGCCAAATAGTTCCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQHITST*PNSSKG Trigger: ACCTTTGGAACTATTTGGGCAAGTGGAAGTGATGTG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGATTTCCTATAGATACTaGGAAGTTGGGTCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQISYRY*EVGSQA Trigger: AGCCTGAGACCCAACTTCCCAGTATCTATAGGAAAT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 ENSMUST00000192919.6 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGTTTTCGGTCTAGAGTaGGAACACTGCATTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQVFGLE*EHCILF Trigger: AAAGAGAATGCAGTGTTCCCACTCTAGACCGAAAAC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGGTTTTCGGTCTAGAGTaGGAACACTGCATTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MILYTSGIIDGAINALCTVFGLE*EHCILF Trigger: AAAGAGAATGCAGTGTTCCCACTCTAGACCGAAAAC...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGACTCTGTGTCCTGAATaGCAGGAGAATTCCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQTLCPE*QENSNK Trigger: TTTGTTGGAATTCTCCTGCCATTCAGGACACAGAGT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGTGGTTTCAATCACTTaGGTATTTGGAATCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQVVSIT*VFGICG Trigger: ACCGCAGATTCCAAATACCCAAGTGATTGAAACCAC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CCA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCAGCATATAATAAATGCTaGTCCATCAATTCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: STDDNGSYTGNDKEVMSPAYNKC*SINSKA Trigger: GGCTTTGGAATTGATGGACCAGCATTTATTATATGC...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGATTATCTTTGCATACTaGCTGTCCAATCCACCGACT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQIIFAY*LSNPPT Trigger: AGTCGGTGGATTGGACAGCCAGTATGCAAAGATAAT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGATTTGGCACATGTGGTaGATCCACACAGGAATTATC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQIWHMW*IHTGII Trigger: GATAATTCCTGTGTGGATCCACCACATGTGCCAAAT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR CCA 90 bp | TTTAAGAGAGGTGATAGACCCAACATCACATGGAAAAATTGGATTGCAACTGTAGACAGTCTCATAATTTaGATCTTTCTGGGACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: FKRGDRPNITWKNWIATVDSLII*IFLGPT Trigger: AGTTGGTCCCAGAAAGATCCAAATTATGAGACTGTC...TACAGTTGCAATCCAATTTTTCCATGTGATGTTGGGTCTATCACCTCTCTTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
||
| 3UTR CAA 72 bp | ATTAGGAGATTTTGCTTTGTTAAAGTAGGTATGGACTaGTTGGATGAAGTGTGTCACTGTGGAGACAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IRRFCFVKVGMD*LDEVCHCGDKF Trigger: AAACTTGTCTCCACAGTGACACACTTCATCCAACAAGTCCATACCTACTTTAACAAAGCAAAATCTCCTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
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| CDS-3UTR TCA 90 bp | GAGACAAGTTTTGAAATTTTCTATGCTGACACTATGCTCAGTGCGACACATTTTTATGTCCTTCAATCTTaGAGCCTGAATTGCATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ETSFEIFYADTMLSATHFYVLQS*SLNCIQ Trigger: TTGAATGCAATTCAGGCTTCAAGATTGAAGGACATA...AAAATGTGTCGCACTGAGCATAGTGTCAGCATAGAAAATTTCAAAACTTGTCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
||
| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCCAAAGGCCATTTTCTaGGCAATGAATTTCCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQPKAIF*AMNFLM Trigger: CATAAGGAAATTCATTGCTCAGAAAATGGCCTTTGG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGACTAATGCAAGAAACTaGCCCATGTCCAATCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQTNARN*PMSNHC Trigger: ACAATGATTGGACATGGGTCAGTTTCTTGCATTAGT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCTAGAGTGGGAACACTaGATTCTCTTTCATAACATG | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQLEWEH*ILFHNM Trigger: CATGTTATGAAAGAGAATGCAGTGTTCCCACTCTAG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGTTTTATTGCTTCTATaGCAGTTGACTTCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQVLLLL*QLTSAL Trigger: GAGTGCTGAAGTCAACTGGCATAGAAGCAATAAAAC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR GCA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGGTTTTATTGCTTCTATaGCAGTTGACTTCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: MILYTSGIIDGAINALCTVLLLL*QLTSAL Trigger: GAGTGCTGAAGTCAACTGGCATAGAAGCAATAAAAC...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGACACATTTAGGAAGCTaGGTCCATTTTCCACTAATG | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQTHLGS*VHFPLM Trigger: CATTAGTGGAAAATGGACCCAGCTTCCTAAATGTGT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCCAAGTATTTCACGGTaGTTTCAATCACTTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQPSISR*FQSLGY Trigger: ATACCCAAGTGATTGAAACCACCGTGAAATACTTGG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGCCAAGTATTTCACGGTaGTTTCAATCACTTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MILYTSGIIDGAINALCTPSISR*FQSLGY Trigger: ATACCCAAGTGATTGAAACCACCGTGAAATACTTGG...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGACAGTCTCATAATTTaGATCTTTCTGGGACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQDSLII*IFLGPT Trigger: AGTTGGTCCCAGAAAGATCCAAATTATGAGACTGTC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000192880.6 |
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| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGATTTCACCTAATAGTTaGTACCCATCATCACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQISPNS*YPSSQV Trigger: TACCTGTGATGATGGGTATCAACTATTAGGTGAAAT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR TCA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGATTTCACCTAATAGTTaGTACCCATCATCACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MILYTSGIIDGAINALCTISPNS*YPSSQV Trigger: TACCTGTGATGATGGGTATCAACTATTAGGTGAAAT...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTATGTCCTTCAATCTTaGAGCCTGAATTGCATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQYVLQS*SLNCIQ Trigger: TTGAATGCAATTCAGGCTTCAAGATTGAAGGACATA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCCATTTTCTGAGCAATaGATTTCCTTATGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQPFSEQ*ISLCPS Trigger: TGAAGGACATAAGGAAATTCATTGCTCAGAAAATGG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR TCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTTCAATATCCTCCCCTaGATGGGAATAAATCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQFNILP*MGINLF Trigger: GAAAAGATTTATTCCCATTCAGGGGAGGATATTGAA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000192880.6 ENSMUST00000192919.6 |
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| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGCATATAATAAATGCTaGTCCATCAATTCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQAYNKC*SINSKA Trigger: GGCTTTGGAATTGATGGACCAGCATTTATTATATGC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS-3UTR CCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTTGTGGAAATTCACATaGTTTCACTTCACAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQLWKFT*FHFTER Trigger: CCTTTCTGTGAAGTGAAACCATGTGAATTTCCACAA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192919.6 |
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| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGGTATAAACAACCTTTaGACCAAACTCAAATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQGINNL*TKLKLR Trigger: TCTCAATTTGAGTTTGGTGCAAAGGTTGTTTATACC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS-3UTR GCA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTCCATGGTGGAGTTATaGGTAAATTCAGTCAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQSMVEL*VNSVNF Trigger: AAAATTGACTGAATTTACGCATAACTCCACCATGGA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS GCA 90 bp | ATCTCTTTTCTTCACAGAAAGGCTGAGAACTCCATCCAGAGCCTGTaGAGACGGCATCCCCTCTTTCTTTGGGCACATAACCATGCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: ISFLHRKAENSIQSL*RRHPLFLWAHNHAY Trigger: GTAAGCATGGTTATGTGCCCAAAGAAAGAGGGGATGCCGTCTGCACAGGCTCTGGATGGAGTTCTCAGCCTTTCTGTGAAGAAAAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS GCA 90 bp | CAGTACCAAGAGGAATTGAAGGTGGAGGTCCACAAGGAAGTCCAATaGAGCGAGGTAATGACTGCCACCTTCCATCTTTGCACACCATTT | + |
|
Preference number: 5 (lower is better) Translates to: QYQEELKVEVHKEVQ*SEVMTATFHLCTPF Trigger: AAATGGTGTGCAAAGATGGAAGGTGGCAGTCATTACCTCGCTGCATTGGACTTCCTTGTGGACCTCCACCTTCAATTCCTCTTGGTACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192919.6 |
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| CDS GCA 90 bp | TTGAAGGTGGAGGTCCACAAGGAAGTCCAACACAGCGAGGTGGAGTaGTCCATTTTCCCATGTAGCAGGTTATCCTATTTTCTTCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LKVEVHKEVQHSEVE*SIFPCSRLSYFLQV Trigger: TACCTGAAGAAAATAGGATAACCTGCTACATGGGAAAATGGAGCACTCCACCTCGCTGTGTTGGACTTCCTTGTGGACCTCCACCTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 |
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| CDS GCA 90 bp | CTGGTTTCACATTTATACCATCTCCATTTTCCACTCGCGGTGGTGTaGAGAGAATTTCCACACATCGTGGCTTTTCATTGCTCCAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVSHLYHLHFPLAVV*REFPHIVAFHCSKG Trigger: GCCTTTGGAGCAATGAAAAGCCACGATGTGTGGAAATTCTCTGCACACCACCGCGAGTGGAAAATGGAGATGGTATAAATGTGAAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS GCA 90 bp | AAGGAAGTCCAATGCAGCGAGGTAATGACTGCCACCTTCCATCTTTaGACACCATTTCTTCTGAGTCCTGAGTTAGGTAATTGTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KEVQCSEVMTATFHL*TPFLLSPELGNCLG Trigger: GCCAAGACAATTACCTAACTCAGGACTCAGAAGAAATGGTGTGCAAAGATGGAAGGTGGCAGTCATTACCTCGCTGCATTGGACTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192919.6 |
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| CDS TCA 90 bp | TATTTGAATTGTGGAAATTCACATGGTTTCACTTCACAGAAAGGCTaGGAACTCCATCCAGAGCCTGTGCAGACGGCATCCCCTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YLNCGNSHGFTSQKG*ELHPEPVQTASPLS Trigger: AGAAAGAGGGGATGCCGTCTGCACAGGCTCTGGATGGAGTTCTCAGCCTTTCTGTGAAGTGAAACCATGTGAATTTCCACAATTCAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192919.6 |
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| CDS CCA 90 bp | ACTCTACACTTCTCCAGTTGGTCTGTTGCAACACATTTAGGAAGCTaGGTCCATTTTCCACTAATGCAAGAAACTGACCCATGTCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: TLHFSSWSVATHLGS*VHFPLMQETDPCPI Trigger: GATTGGACATGGGTCAGTTTCTTGCATTAGTGGAAAATGGACCCAGCTTCCTAAATGTGTTGCAACAGACCAACTGGAGAAGTGTAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS CCA 90 bp | ATTGCTTCTATGCCAGTTGACTTCAGCACTCTACACTTCTCCAGTTaGTCTGTTGCAACACATTTAGGAAGCTGGGTCCATTTTCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: IASMPVDFSTLHFSS*SVATHLGSWVHFPL Trigger: TAGTGGAAAATGGACCCAGCTTCCTAAATGTGTTGCAACAGACCAACTGGAGAAGTGTAGAGTGCTGAAGTCAACTGGCATAGAAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS-3UTR CAA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCAATCTTGAAGCCTGAATaGCATTCAAACCGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: FSGITHACKHVGGSDHFPILKPE*HSNRTT Trigger: GGTGGTGCGGTTTGAATGCAATTCAGGCTTCAAGAT...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR CAA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCAGGATCCCATTTTCCATaGATACAGATTGAGCGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FSGITHACKHVGGSDHFPGSHFP*IQIERS Trigger: CGAACGCTCAATCTGTATCAATGGAAAATGGGATCC...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS-3UTR CAA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCACAATCACTTGGGTATTaGGAATCTGCGGTGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: STDDNGSYTGNDKEVMSPQSLGY*ESAVEE Trigger: CTCCTCCACCGCAGATTCCAAATACCCAAGTGATTG...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
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| CDS TCA 90 bp | CTGTCACAGGTAGACACTTCACAACTTCACATAGTGGAATATCATTaGTCCACCCATCTGCACCACATTCACGGTAATCAATTTCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: LSQVDTSQLHIVEYH*STHLHHIHGNQFHL Trigger: TAGGTGAAATTGATTACCGTGAATGTGGTGCAGATGGGTGGATCAATGATATTCCACTATGTGAAGTTGTGAAGTGTCTACCTGTGACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS TCA 90 bp | GCTTGTACAGTTTGGTTCAGGATCCCATTTTCCATTGATACAGATTaGGCGTTCGTACTCCTGCTTGTCTCTACATTTGTAATCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: ACTVWFRIPFSIDTD*AFVLLLVSTFVIHG Trigger: ACCATGGATTACAAATGTAGAGACAAGCAGGAGTACGAACGCTCAATCTGTATCAATGGAAAATGGGATCCTGAACCAAACTGTACAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS GCA 90 bp | GCATTTTGGTGGGTCAGACCACTTTCCTCCTTCGCATATAATAAATaGTGGTCCATCAATTCCAAAGCCTGTAGAACAATGGTATGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: AFWWVRPLSSFAYNK*WSINSKACRTMVCN Trigger: GTTACATACCATTGTTCTACAGGCTTTGGAATTGATGGACCAGCATTTATTATATGCGAAGGAGGAAAGTGGTCTGACCCACCAAAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS CCA 90 bp | TCCTCAATACATACAGGCAAGGTTGTCCAATTCCCATCAACACACTaGATTTTATTGGGTCCCTTCAGTAGGAATCTAGGTTTGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSIHTGKVVQFPSTH*ILLGPFSRNLGLQS Trigger: TGATTGCAAACCTAGATTCCTACTGAAGGGACCCAATAAAATCCAGTGTGTTGATGGGAATTGGACAACCTTGCCTGTATGTATTGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS CCA 90 bp | TTTTGGTGGGTCAGACCACTTTCCTCCTTCGCATATAATAAATGCTaGTCCATCAATTCCAAAGCCTGTAGAACAATGGTATGTAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: FWWVRPLSSFAYNKC*SINSKACRTMVCNL Trigger: GAGGTTACATACCATTGTTCTACAGGCTTTGGAATTGATGGACCAGCATTTATTATATGCGAAGGAGGAAAGTGGTCTGACCCACCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS CCA 90 bp | GGGTCTCAGGCTCTCTTCATAATACAGACGTCCATATTTGAATTGTaGAAATTCACATGGTTTCACTTCACAGAAAGGCTGAGAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSQALFIIQTSIFEL*KFTWFHFTERLRTP Trigger: TGGAGTTCTCAGCCTTTCTGTGAAGTGAAACCATGTGAATTTCCACAATTCAAATATGGACGTCTGTATTATGAAGAGAGCCTGAGACCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192919.6 |
||
| CDS-3UTR CAA 90 bp | TCAACTGATGATAATGGTTCATATACTGGTAATGACAAGGAGGTGATGTCTCCACATCGTGGCTTTTCATaGCTCCAAAGGCCATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: STDDNGSYTGNDKEVMSPHRGFS*LQRPFS Trigger: AGAAAATGGCCTTTGGAGCAATGAAAAGCCACGATG...TGGAGACATCACCTCCTTGTCATTACCAGTATATGAACCATTATCATCAGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR CAA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGGAGGAACAGAACACTaGGCAGAGCCATGTTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQGGTEH*AEPCSS Trigger: ACTTGAACATGGCTCTGCCAAGTGTTCTGTTCCTCC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CAA 90 bp | TTTTCTGGTATTACACATGCATGTAAGCATGTTGGTGGCTCAGACCACTTTCCATTTTGCTTGTACAGTTaGGTTCAGGATCCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSGITHACKHVGGSDHFPFCLYS*VQDPIF Trigger: GAAAATGGGATCCTGAACCAAACTGTACAAGCAAAA...TGGAAAGTGGTCTGAGCCACCAACATGCTTACATGCATGTGTAATACCAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR CAA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCAATCACTTGGGTATTaGGAATCTGCGGTGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQQSLGY*ESAVEE Trigger: CTCCTCCACCGCAGATTCCAAATACCCAAGTGATTG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CAA 90 bp | TTTGAAATTTTCTATGCTGACACTATGCTCAGTGCGACACATTTTCTTCTGCTGTTGAGTCTCGGCACTTaGGTTTTTCTGTCCATATCC | + |
|
Preference number: 5 (lower is better) Translates to: FEIFYADTMLSATHFLLLLSLGT*VFLSIS Trigger: GGATATGGACAGAAAAACCAAAGTGCCGAGACTCAA...CAGCAGAAGAAAATGTGTCGCACTGAGCATAGTGTCAGCATAGAAAATTTCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
||
| CDS-3UTR CAA 90 bp | CTGCCTGGACACTGTCATACTTTCCACCATGATGATAATGGGCTAAATATATTAACGTCACAATCCGTTTaGATACGGATGCATTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPGHCHTFHHDDNGLNILTSQSV*IRMHLG Trigger: TCCCAAATGCATCCGTATCAAAACGGATTGTGACGT...TAATATATTTAGCCCATTATCATCATGGTGGAAAGTATGACAGTGTCCAGGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
||
| CDS TCA 90 bp | AAAGGCCATTTTCTGAGCAATGAATTTCCTTATGTCCTTCAATCTTaGAGCCTGAATTGCATTCAAACCGCACCACCTGTCCAAAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: KGHFLSNEFPYVLQS*SLNCIQTAPPVQNS Trigger: ACTATTTTGGACAGGTGGTGCGGTTTGAATGCAATTCAGGCTTCAAGATTGAAGGACATAAGGAAATTCATTGCTCAGAAAATGGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS TCA 90 bp | ACACATCGTGGCTTTTCATTGCTCCAAAGGCCATTTTCTGAGCAATaGATTTCCTTATGTCCTTCAATCTTGAAGCCTGAATTGCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: THRGFSLLQRPFSEQ*ISLCPSILKPELHS Trigger: TGAATGCAATTCAGGCTTCAAGATTGAAGGACATAAGGAAATTCATTGCTCAGAAAATGGCCTTTGGAGCAATGAAAAGCCACGATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR CAA 90 bp | TTAATATGTAGAGATGTCAGCCTTTTTGTCAGCATCATGTCTGCCTGGACACTGAGGTATAAACAACCTTaGCACCAAACTCAAATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LICRDVSLFVSIMSAWTLRYKQP*HQTQIE Trigger: CTCAATTTGAGTTTGGTGCAAAGGTTGTTTATACCT...CAGTGTCCAGGCAGACATGATGCTGACAAAAAGGCTGACATCTCTACATATTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
||
| CDS-3UTR CAA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGATCTTGAAGCCTGAATaGCATTCAAACCGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQILKPE*HSNRTT Trigger: GGTGGTGCGGTTTGAATGCAATTCAGGCTTCAAGAT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR CAA 90 bp | GAGACAAGTTTTGAAATTTTCTATGCTGACACTATGCTCAGTGCGACACATTTTCATCGTGGCTTTTCATaGCTCCAAAGGCCATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ETSFEIFYADTMLSATHFHRGFS*LQRPFS Trigger: AGAAAATGGCCTTTGGAGCAATGAAAAGCCACGATG...AAAATGTGTCGCACTGAGCATAGTGTCAGCATAGAAAATTTCAAAACTTGTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000192880.6 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGACAGACCTCGGCACTTaGGTTTTTCTGTCCATATCC | + |
|
Preference number: 5 (lower is better) Translates to: MILYTSGIIDGAINALCTTDLGT*VFLSIS Trigger: GGATATGGACAGAAAAACCAAAGTGCCGAGGTCTGT...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS CCA 90 bp | GTCCATAATATAAGCCAAATAATTCTTGCTGACAGTCTCATAATTTaGATCTTTCTGGGACCAACTGACTCCAAGAGAAATCTGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VHNISQIILADSLII*IFLGPTDSKRNLCC Trigger: ACAGCACAGATTTCTCTTGGAGTCAGTTGGTCCCAGAAAGATCCAAATTATGAGACTGTCAGCAAGAATTATTTGGCTTATATTATGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000192880.6 |
||
| CDS-3UTR CAA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCATCGTGGCTTTTCATaGCTCCAAAGGCCATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQHRGFS*LQRPFS Trigger: AGAAAATGGCCTTTGGAGCAATGAAAAGCCACGATG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR CAA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTTGCTTCTATGCCAGTaGACTTCAGCACTCTACACT | + |
|
Preference number: 5 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQLLLCQ*TSALYT Trigger: AGTGTAGAGTGCTGAAGTCAACTGGCATAGAAGCAA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CAA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGGGATCCCATTTTCCATaGATACAGATTGAGCGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQGSHFP*IQIERS Trigger: CGAACGCTCAATCTGTATCAATGGAAAATGGGATCC...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CAA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGCCGTTTTTATGCATTTaGGTGGGTCAGACCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQPFLCI*VGQTTF Trigger: GAAAGTGGTCTGACCCACCAAAATGCATAAAAACGG...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGCCGTTTTTATGCATTTaGGTGGGTCAGACCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MILYTSGIIDGAINALCTPFLCI*VGQTTF Trigger: GAAAGTGGTCTGACCCACCAAAATGCATAAAAACGG...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR CAA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTTGAGTCTCGGCACTTaGGTTTTTCTGTCCATATCC | + |
|
Preference number: 5 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQLSLGT*VFLSIS Trigger: GGATATGGACAGAAAAACCAAAGTGCCGAGACTCAA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000192880.6 |
||
| CDS-3UTR CAA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGACACACTGGATTTTATaGGGTCCCTTCAGTAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQTHWIL*GPFSRN Trigger: ATTCCTACTGAAGGGACCCAATAAAATCCAGTGTGT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGACACACTGGATTTTATaGGGTCCCTTCAGTAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: MILYTSGIIDGAINALCTTHWIL*GPFSRN Trigger: ATTCCTACTGAAGGGACCCAATAAAATCCAGTGTGT...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR CAA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTTTTGCTTGTACAGTTaGGTTCAGGATCCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQFCLYS*VQDPIF Trigger: GAAAATGGGATCCTGAACCAAACTGTACAAGCAAAA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS-3UTR CAA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGAGGTATAAACAACCTTaGCACCAAACTCAAATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQRYKQP*HQTQIE Trigger: CTCAATTTGAGTTTGGTGCAAAGGTTGTTTATACCT...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTATACACAAGTGGGATAATTGATGGTGCCATTAATGCACTTTGTACGAGGTATAAACAACCTTaGCACCAAACTCAAATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: MILYTSGIIDGAINALCTRYKQP*HQTQIE Trigger: CTCAATTTGAGTTTGGTGCAAAGGTTGTTTATACCT...CGTACAAAGTGCATTAATGGCACCATCAATTATCCCACTTGTGTATAAAATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123238.2 |
||
| CDS-3UTR CAA 90 bp | TCAATATATCCTTTATCCACTGTAAATCAGGACCTTACATCAAAAGGTATCCAGTTTGAAGGCAAGTTATaGATCCTGATATTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SIYPLSTVNQDLTSKGIQFEGKL*ILIFLQ Trigger: CTGGAGAAATATCAGGATCAATAACTTGCCTTCAAA...CTGGATACCTTTTGATGTAAGGTCCTGATTTACAGTGGATAAAGGATATATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS GCA 72 bp | GCCAGCCTAAAGGACCCAAAGGGTGTGTCTCCGGGATaGCCACAAGGCTTTTTCCGACATATCCTGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASLKDPKGVSPG*PQGFFRHILDG Trigger: CCCATCCAGGATATGTCGGAAAAAGCCTTGTGGGCATCCCGGAGACACACCCTTTGGGTCCTTTAGGCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS GCA 72 bp | TTTCCTGACGCATGGGACTTCAGGCTCCCACCCTTGTaGTGTGCAACGAAGGTAGTCCCAGGAATACCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FPDAWDFRLPPL*CATKVVPGIPR Trigger: TCTGGGTATTCCTGGGACTACCTTCGTTGCACAGCACAAGGGTGGGAGCCTGAAGTCCCATGCGTCAGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 ENSMUST00000192919.6 |
||
| CDS CCA 72 bp | AGGTGGAGGTCCACAAGGAAGTCCAACACAGCGAGGTaGAGTGCTCCATTTTCCCATGTAGCAGGTTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: RWRSTRKSNTAR*SAPFSHVAGYP Trigger: AGGATAACCTGCTACATGGGAAAATGGAGCACTCCACCTCGCTGTGTTGGACTTCCTTGTGGACCTCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 |
||
| CDS GCA 72 bp | GAGGAATTGAAGGTGGAGGTCCACAAGGAAGTCCAATaGAGCGAGGTAATGACTGCCACCTTCCATCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: EELKVEVHKEVQ*SEVMTATFHLC Trigger: GCAAAGATGGAAGGTGGCAGTCATTACCTCGCTGCATTGGACTTCCTTGTGGACCTCCACCTTCAATTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192919.6 |
||
| CDS TCA 72 bp | TGTGGAAATTCACATGGTTTCACTTCACAGAAAGGCTaGGAACTCCATCCAGAGCCTGTGCAGACGGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: CGNSHGFTSQKG*ELHPEPVQTAS Trigger: GGATGCCGTCTGCACAGGCTCTGGATGGAGTTCTCAGCCTTTCTGTGAAGTGAAACCATGTGAATTTCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192919.6 |
||
| CDS GCA 72 bp | AACAACCTTTGCACCAAACTCAAATTGAGATCCAACTaGCAGCCTAAAGGACCCAAAGGGTGTGTCTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: NNLCTKLKLRSN*QPKGPKGCVSG Trigger: CCCGGAGACACACCCTTTGGGTCCTTTAGGCTGGCAGTTGGATCTCAATTTGAGTTTGGTGCAAAGGTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS CCA 72 bp | GGGATGCCCACAAGGCTTTTTCCGACATATCCTGGATaGGTTAGACGCCACCCATTTTCCATTCTTGCATAC | + |
|
Preference number: 6 (lower is better) Translates to: GMPTRLFPTYPG*VRRHPFSILAY Trigger: GTATGCAAGAATGGAAAATGGGTGGCGTCTAACCCATCCAGGATATGTCGGAAAAAGCCTTGTGGGCATCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
||
| CDS CCA 72 bp | ATTCTCCACATAATGGAAAACACATTTCCTGACGCATaGGACTTCAGGCTCCCACCCTTGTGCTGTGCAACG | + |
|
Preference number: 6 (lower is better) Translates to: ILHIMENTFPDA*DFRLPPLCCAT Trigger: CGTTGCACAGCACAAGGGTGGGAGCCTGAAGTCCCATGCGTCAGGAAATGTGTTTTCCATTATGTGGAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 ENSMUST00000192919.6 |
||
| CDS GCA 72 bp | TTCACGGTGGTTTCAATCACTTGGGTATTTGGAATCTaGGGTGGAGGAGGGCAGGATGTTTTGCTTGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: FTVVSITWVFGI*GGGGQDVLLVQ Trigger: CTGTACAAGCAAAACATCCTGCCCTCCTCCACCGCAGATTCCAAATACCCAAGTGATTGAAACCACCGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS GCA 72 bp | GAGGTCCACAAGGAAGTCCAACACAGCGAGGTGGAGTaGTCCATTTTCCCATGTAGCAGGTTATCCTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: EVHKEVQHSEVE*SIFPCSRLSYF Trigger: AAAATAGGATAACCTGCTACATGGGAAAATGGAGCACTCCACCTCGCTGTGTTGGACTTCCTTGTGGACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 |
||
| CDS CCA 72 bp | GGTGGTTTCAATCACTTGGGTATTTGGAATCTGCGGTaGAGGAGGGCAGGATGTTTTGCTTGTACAGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGFNHLGIWNLR*RRAGCFACTVW Trigger: CCAAACTGTACAAGCAAAACATCCTGCCCTCCTCCACCGCAGATTCCAAATACCCAAGTGATTGAAACCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS CAA 72 bp | CCAAGTATTTCACGGTGGTTTCAATCACTTGGGTATTaGGAATCTGCGGTGGAGGAGGGCAGGATGTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSISRWFQSLGY*ESAVEEGRMFC Trigger: GCAAAACATCCTGCCCTCCTCCACCGCAGATTCCAAATACCCAAGTGATTGAAACCACCGTGAAATACTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS CAA 72 bp | TTCTCCATCCAAGTATTTCACGGTGGTTTCAATCACTaGGGTATTTGGAATCTGCGGTGGAGGAGGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: FSIQVFHGGFNH*GIWNLRWRRAG Trigger: TCCTGCCCTCCTCCACCGCAGATTCCAAATACCCAAGTGATTGAAACCACCGTGAAATACTTGGATGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS CAA 72 bp | CCATTGTCAATGTGTATATCTGATGCTGAACATGTCTaGATACGGATGCATTTGGGAGGAGGGGACCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLSMCISDAEHV*IRMHLGGGDQP Trigger: TGGCTGGTCCCCTCCTCCCAAATGCATCCGTATCAAGACATGTTCAGCATCAGATATACACATTGACAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS CAA 72 bp | GTATTTGGAATCTGCGGTGGAGGAGGGCAGGATGTTTaGCTTGTACAGTTTGGTTCAGGATCCCATTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VFGICGGGGQDV*LVQFGSGSHFP Trigger: TGGAAAATGGGATCCTGAACCAAACTGTACAAGCAAAACATCCTGCCCTCCTCCACCGCAGATTCCAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
||
| CDS CAA 72 bp | AACTCTCTAGCTCAAGAGAAACAGTACCAAGAGGAATaGAAGGTGGAGGTCCACAAGGAAGTCCAACACAGC | + |
|
Preference number: 6 (lower is better) Translates to: NSLAQEKQYQEE*KVEVHKEVQHS Trigger: GCTGTGTTGGACTTCCTTGTGGACCTCCACCTTCAATTCCTCTTGGTACTGTTTCTCTTGAGCTAGAGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 |
||
| CDS CAA 72 bp | GAGGAGGCCCACATTTCCCTGTTGAGTCTCGGCACTTaGGTTTTTCTGTCCATATCCCATTTTCACACATCA | + |
|
Preference number: 6 (lower is better) Translates to: EEAHISLLSLGT*VFLSISHFHTS Trigger: TGATGTGTGAAAATGGGATATGGACAGAAAAACCAAAGTGCCGAGACTCAACAGGGAAATGTGGGCCTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000192880.6 |
||
| CDS CAA 72 bp | AACTCTCTAGCTCAAGAGAAACAGTACCAAGAGGAATaGAAGGTGGAGGTCCACAAGGAAGTCCAATGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NSLAQEKQYQEE*KVEVHKEVQCS Trigger: GCTGCATTGGACTTCCTTGTGGACCTCCACCTTCAATTCCTCTTGGTACTGTTTCTCTTGAGCTAGAGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192919.6 |
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| CDS TCA 72 bp | CATTGTCAATGTGTATATCTGATGCTGAACATGTCTTaGTACGGATGCATTTGGGAGGAGGGGACCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: HCQCVYLMLNMS*YGCIWEEGTSH Trigger: ATGGCTGGTCCCCTCCTCCCAAATGCATCCGTATCAAGACATGTTCAGCATCAGATATACACATTGACAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS GCA 72 bp | GGGAAACGACTAGTTTTCGGTCTAGAGTGGGAACACTaGATTCTCTTTCATAACATGAGGGTGTATCAGACC | + |
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Preference number: 6 (lower is better) Translates to: GKRLVFGLEWEH*ILFHNMRVYQT Trigger: GGTCTGATACACCCTCATGTTATGAAAGAGAATGCAGTGTTCCCACTCTAGACCGAAAACTAGTCGTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS GCA 72 bp | CAATGCAGCGAGGTAATGACTGCCACCTTCCATCTTTaGACACCATTTCTTCTGAGTCCTGAGTTAGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: QCSEVMTATFHL*TPFLLSPELGN Trigger: ATTACCTAACTCAGGACTCAGAAGAAATGGTGTGCAAAGATGGAAGGTGGCAGTCATTACCTCGCTGCATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS CCA 72 bp | GTTTCAAGGTACATCTTGGAACAGGGATCCAGCCAGTaGGTGTACACTTTGAAACAGTTGATCCAGTTACAG | + |
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Preference number: 6 (lower is better) Translates to: VSRYILEQGSSQ*VYTLKQLIQLQ Trigger: CTGTAACTGGATCAACTGTTTCAAAGTGTACACCCACTGGCTGGATCCCTGTTCCAAGATGTACCTTGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS CAA 90 bp | GAATGTCTCCACATGTTCTCTCCTCCTCAATACATACAGGCAAGGTaGTCCAATTCCCATCAACACACTGGATTTTATTGGGTCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ECLHMFSPPQYIQAR*SNSHQHTGFYWVPS Trigger: TGAAGGGACCCAATAAAATCCAGTGTGTTGATGGGAATTGGACAACCTTGCCTGTATGTATTGAGGAGGAGAGAACATGTGGAGACATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS TCA 72 bp | TGCTTGTACAGTTTGGTTCAGGATCCCATTTTCCATTaGTACAGATTGAGCGTTCGTACTCCTGCTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: CLYSLVQDPIFH*YRLSVRTPACL Trigger: GAGACAAGCAGGAGTACGAACGCTCAATCTGTATCAATGGAAAATGGGATCCTGAACCAAACTGTACAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS GCA 72 bp | CACCTGTCCAAAATAGTATTCCTGGTCTGTTTCTGCTaGACCACTCACAATTCTTCCATTCTCGAGTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: HLSKIVFLVCFC*TTHNSSILEFC Trigger: ACAGAACTCGAGAATGGAAGAATTGTGAGTGGTGCAGCAGAAACAGACCAGGAATACTATTTTGGACAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS CCA 72 bp | GGTCCTTGTTACTATAGTAGCATTTGGCACATGTGGTaGATCCACACAGGAATTATCTTTGCATACTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GPCYYSSIWHMW*IHTGIIFAYWL Trigger: CAGCCAGTATGCAAAGATAATTCCTGTGTGGATCCACCACATGTGCCAAATGCTACTATAGTAACAAGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS CAA 72 bp | CTGACCACGAGCCTGAGAGAATTTCTGAATTTTCTCTaGGAGGAGGACCTTTACAATCTTCTGCTGCACAAA | + |
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Preference number: 6 (lower is better) Translates to: LTTSLREFLNFL*EEDLYNLLLHK Trigger: TTTGTGCAGCAGAAGATTGTAAAGGTCCTCCTCCAAGAGAAAATTCAGAAATTCTCTCAGGCTCGTGGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS GCA 72 bp | GTGTGCAGAGAATTTCCACACATCGTGGCTTTTCATTaGTCCAAAGGCCATTTTCTGAGCAATGAATTTCCT | + |
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Preference number: 6 (lower is better) Translates to: VCREFPHIVAFH*SKGHFLSNEFP Trigger: AGGAAATTCATTGCTCAGAAAATGGCCTTTGGAGCAATGAAAAGCCACGATGTGTGGAAATTCTCTGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS GCA 72 bp | TGGGTCAGACCACTTTCCTCCTTCGCATATAATAAATaGTGGTCCATCAATTCCAAAGCCTGTAGAACAATG | + |
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Preference number: 6 (lower is better) Translates to: WVRPLSSFAYNK*WSINSKACRTM Trigger: CATTGTTCTACAGGCTTTGGAATTGATGGACCAGCATTTATTATATGCGAAGGAGGAAAGTGGTCTGACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS CCA 72 bp | CTTGGTCCTTGTTACTATAGTAGCATTTGGCACATGTaGTGGATCCACACAGGAATTATCTTTGCATACTGG | + |
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Preference number: 6 (lower is better) Translates to: LGPCYYSSIWHM*WIHTGIIFAYW Trigger: CCAGTATGCAAAGATAATTCCTGTGTGGATCCACCACATGTGCCAAATGCTACTATAGTAACAAGGACCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS CAA 72 bp | ATCCTGGATGGGTTAGACGCCACCCATTTTCCATTCTaGCATACTTTTACAATAGTGCCAAGTGTTCGGTAT | + |
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Preference number: 6 (lower is better) Translates to: ILDGLDATHFPF*HTFTIVPSVRY Trigger: ATACCGAACACTTGGCACTATTGTAAAAGTATGCAAGAATGGAAAATGGGTGGCGTCTAACCCATCCAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS CAA 72 bp | CAGGGATCCAGCCAGTGGGTGTACACTTTGAAACAGTaGATCCAGTTACAGGATAGAAGCCATAATTACATT | + |
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Preference number: 6 (lower is better) Translates to: QGSSQWVYTLKQ*IQLQDRSHNYI Trigger: AATGTAATTATGGCTTCTATCCTGTAACTGGATCAACTGTTTCAAAGTGTACACCCACTGGCTGGATCCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS CAA 72 bp | CACATGTTCTCTCCTCCTCAATACATACAGGCAAGGTaGTCCAATTCCCATCAACACACTGGATTTTATTGG | + |
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Preference number: 6 (lower is better) Translates to: HMFSPPQYIQAR*SNSHQHTGFYW Trigger: CCAATAAAATCCAGTGTGTTGATGGGAATTGGACAACCTTGCCTGTATGTATTGAGGAGGAGAGAACATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS CAA 72 bp | TTGCTTGTACAGTTTGGTTCAGGATCCCATTTTCCATaGATACAGATTGAGCGTTCGTACTCCTGCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLVQFGSGSHFP*IQIERSYSCLS Trigger: AGACAAGCAGGAGTACGAACGCTCAATCTGTATCAATGGAAAATGGGATCCTGAACCAAACTGTACAAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS CAA 90 bp | ATAGTTGTTCTGACCACGAGCCTGAGAGAATTTCTGAATTTTCTCTaGGAGGAGGACCTTTACAATCTTCTGCTGCACAAACAGTCCATA | + |
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Preference number: 6 (lower is better) Translates to: IVVLTTSLREFLNFL*EEDLYNLLLHKQSI Trigger: TATGGACTGTTTGTGCAGCAGAAGATTGTAAAGGTCCTCCTCCAAGAGAAAATTCAGAAATTCTCTCAGGCTCGTGGTCAGAACAACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS CAA 90 bp | TCAAGGTACATCTTGGAACAGGGATCCAGCCAGTGGGTGTACACTTaGAAACAGTTGATCCAGTTACAGGATAGAAGCCATAATTACATT | + |
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Preference number: 6 (lower is better) Translates to: SRYILEQGSSQWVYT*KQLIQLQDRSHNYI Trigger: AATGTAATTATGGCTTCTATCCTGTAACTGGATCAACTGTTTCAAAGTGTACACCCACTGGCTGGATCCCTGTTCCAAGATGTACCTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS TCA 72 bp | GTAGACACTTCACAACTTCACATAGTGGAATATCATTaGTCCACCCATCTGCACCACATTCACGGTAATCAA | + |
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Preference number: 6 (lower is better) Translates to: VDTSQLHIVEYH*STHLHHIHGNQ Trigger: TTGATTACCGTGAATGTGGTGCAGATGGGTGGATCAATGATATTCCACTATGTGAAGTTGTGAAGTGTCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS TCA 72 bp | TTTCTGAGCAATGAATTTCCTTATGTCCTTCAATCTTaGAGCCTGAATTGCATTCAAACCGCACCACCTGTC | + |
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Preference number: 6 (lower is better) Translates to: FLSNEFPYVLQS*SLNCIQTAPPV Trigger: GACAGGTGGTGCGGTTTGAATGCAATTCAGGCTTCAAGATTGAAGGACATAAGGAAATTCATTGCTCAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS TCA 72 bp | AATTTCCCCATTAAGAATTTCAAGAGGTGGTGCACATaGTGCTACTTGACCTTTACATGTAGGGAAACCAGG | + |
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Preference number: 6 (lower is better) Translates to: NFPIKNFKRWCT*CYLTFTCRETR Trigger: CCTGGTTTCCCTACATGTAAAGGTCAAGTAGCATCATGTGCACCACCTCTTGAAATTCTTAATGGGGAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS TCA 72 bp | GTTTGGTTCAGGATCCCATTTTCCATTGATACAGATTaGGCGTTCGTACTCCTGCTTGTCTCTACATTTGTA | + |
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Preference number: 6 (lower is better) Translates to: VWFRIPFSIDTD*AFVLLLVSTFV Trigger: TACAAATGTAGAGACAAGCAGGAGTACGAACGCTCAATCTGTATCAATGGAAAATGGGATCCTGAACCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS CCA 72 bp | ATACAGACGTCCATATTTGAATTGTGGAAATTCACATaGTTTCAAGGTACATCTTGGAACAGGGATCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: IQTSIFELWKFT*FQGTSWNRDPA Trigger: GGCTGGATCCCTGTTCCAAGATGTACCTTGAAACCATGTGAATTTCCACAATTCAAATATGGACGTCTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS CCA 72 bp | GTCAGACCACTTTCCTCCTTCGCATATAATAAATGCTaGTCCATCAATTCCAAAGCCTGTAGAACAATGGTA | + |
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Preference number: 6 (lower is better) Translates to: VRPLSSFAYNKC*SINSKACRTMV Trigger: TACCATTGTTCTACAGGCTTTGGAATTGATGGACCAGCATTTATTATATGCGAAGGAGGAAAGTGGTCTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS TCA 72 bp | GCAATGAATTTCCTTATGTCCTTCAATCTTGAAGCCTaGATTGCATTCAAACCGCACCACCTGTCCAAAATA | + |
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Preference number: 6 (lower is better) Translates to: AMNFLMSFNLEA*IAFKPHHLSKI Trigger: TATTTTGGACAGGTGGTGCGGTTTGAATGCAATTCAGGCTTCAAGATTGAAGGACATAAGGAAATTCATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS TCA 72 bp | AATCATTGTGAAGTTTTCTTCACAAATGAACTCCACTaGATCTCCATGGTGGTAGGGAGGAACAGAACACTT | + |
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Preference number: 6 (lower is better) Translates to: NHCEVFFTNELH*ISMVVGRNRTL Trigger: AAGTGTTCTGTTCCTCCCTACCACCATGGAGATTCAGTGGAGTTCATTTGTGAAGAAAACTTCACAATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS CAA 72 bp | ATTCAGTCAATTTTGGTTTTATTGCTTCTATGCCAGTaGACTTCAGCACTCTACACTTCTCCAGTTGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: IQSILVLLLLCQ*TSALYTSPVGL Trigger: CAGACCAACTGGAGAAGTGTAGAGTGCTGAAGTCAACTGGCATAGAAGCAATAAAACCAAAATTGACTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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| CDS CAA 72 bp | CAGGCTCTCTTCATAATACAGACGTCCATATTTGAATaGTGGAAATTCACATGGTTTCAAGGTACATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: QALFIIQTSIFE*WKFTWFQGTSW Trigger: CCAAGATGTACCTTGAAACCATGTGAATTTCCACAATTCAAATATGGACGTCTGTATTATGAAGAGAGCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS CCA 72 bp | GCTCTCTTCATAATACAGACGTCCATATTTGAATTGTaGAAATTCACATGGTTTCAAGGTACATCTTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: ALFIIQTSIFEL*KFTWFQGTSWN Trigger: GTTCCAAGATGTACCTTGAAACCATGTGAATTTCCACAATTCAAATATGGACGTCTGTATTATGAAGAGAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS CCA 72 bp | ATAAGCCAAATAATTCTTGCTGACAGTCTCATAATTTaGATCTTTCTGGGACCAACTGACTCCAAGAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: ISQIILADSLII*IFLGPTDSKRN Trigger: ATTTCTCTTGGAGTCAGTTGGTCCCAGAAAGATCCAAATTATGAGACTGTCAGCAAGAATTATTTGGCTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000192880.6 |
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| CDS TCA 72 bp | TGTCTGAGCCATTCATTTGATAAGGAGATTGACATCTaGATGTCACTTGTTCTCCTGTCCTATATGATTTTT | + |
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Preference number: 6 (lower is better) Translates to: CLSHSFDKEIDI*MSLVLLSYMIF Trigger: AAAAATCATATAGGACAGGAGAACAAGTGACATTCAGATGTCAATCTCCTTATCAAATGAATGGCTCAGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 ENSMUST00000192919.6 |
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| CDS CCA 72 bp | ATATTTATTCTTGGTCCTTGTTACTATAGTAGCATTTaGCACATGTGGTGGATCCACACAGGAATTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: IFILGPCYYSSI*HMWWIHTGIIF Trigger: AAAGATAATTCCTGTGTGGATCCACCACATGTGCCAAATGCTACTATAGTAACAAGGACCAAGAATAAATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192880.6 |
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| CDS CAA 72 bp | GAAGGCAAGTTATTGATCCTGATATTTCTCCAGTATTaGTCACATATCCCTGCTTACATCTATAGGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: EGKLLILIFLQY*SHIPAYIYRMF Trigger: AAACATCCTATAGATGTAAGCAGGGATATGTGACAAATACTGGAGAAATATCAGGATCAATAACTTGCCTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066859.13 ENSMUST00000111976.9 ENSMUST00000111977.8 ENSMUST00000123238.2 ENSMUST00000192919.6 |
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