Pregenerated sensors for CFB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090231Ensembl transcript IDs: ENSMUST00000025229.11, ENSMUST00000128767.8, ENSMUST00000133127.2, ENSMUST00000141295.8, ENSMUST00000153400.8, ENSMUST00000154526.8, ENSMUST00000176203.9, ENSMUST00000176332.2
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCACAGGGAGCAACTGTTCCTTGTGCTGCTTGCAGGTGGCTGTCTaGGGAAGCCTCAAGGCTCGTGTGGTTCCCTCCGTGCAGGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: FTGSNCSLCCLQVAV*GSLKARVVPSVQGR Trigger: TCTCCCCTGCACGGAGGGAACCACACGAGCCTTGAGGCTTCCTCAGACAGCCACCTGCAAGCAGCACAAGGAACAGTTGCTCCCTGTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| 3UTR CCA 90 bp | GTTGGGGTCAGCATAGGGATCCACCCCTCCTGTGCAGAGGAACCGTaGAGTGACCACCTCAGAGGCATCTTTGACCTTCTCATAGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: VGVSIGIHPSCAEEP*SDHLRGIFDLLIAL Trigger: CAAGGCTATGAGAAGGTCAAAGATGCCTCTGAGGTGGTCACTCCACGGTTCCTCTGCACAGGAGGGGTGGATCCCTATGCTGACCCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| 3UTR GCA 90 bp | TCCCCATTCTTGATGTACACCTCCTTCCGAGTCAGGCTCTTCCCTTaGTCAGATACAAACAGAGCTTTGACATCCTTCACAGGGAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: SPFLMYTSFRVRLFP*SDTNRALTSFTGSN Trigger: GTTGCTCCCTGTGAAGGATGTCAAAGCTCTGTTTGTATCTGAGCAAGGGAAGAGCCTGACTCGGAAGGAGGTGTACATCAAGAATGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGTGTTGGGGTCAGCATAGGGATCCACCCCTCCTGTGCAGAGGAACCGTGGTCTTGTCCCCATTCTTaGTGTACACCTCCTTCCGAG | + |
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Preference number: 2 (lower is better) Translates to: ACVGVSIGIHPSCAEEPWSCPHS*CTPPSE Trigger: CTCGGAAGGAGGTGTACATCAAGAATGGGGACAAGA...CCACGGTTCCTCTGCACAGGAGGGGTGGATCCCTATGCTGACCCCAACACATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| 3UTR CAA 90 bp | CCGTGGAGTGACCACCTCAGAGGCATCTTTGACCTTCTCATAGCCTaGGGCCTTTGTAGCATCTCTCTCACAACTGGCTTTCTTGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: PWSDHLRGIFDLLIA*GLCSISLTTGFLVP Trigger: GGGGACAAGAAAGCCAGTTGTGAGAGAGATGCTACAAAGGCCCAAGGCTATGAGAAGGTCAAAGATGCCTCTGAGGTGGTCACTCCACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCACCCCTCCTGTGCAGAGGAACCGTGGAGTGACCACCTCAGAGGCATCTTTATACAAACAGAGCTTTaGCATCCTTCACAGGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: IHPSCAEEPWSDHLRGIFIQTEL*HPSQGA Trigger: TGCTCCCTGTGAAGGATGTCAAAGCTCTGTTTGTAT...AAAGATGCCTCTGAGGTGGTCACTCCACGGTTCCTCTGCACAGGAGGGGTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGAGCTGTTGCCGCCTCTaGTCTCTGCAGACATCTACT | + |
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Preference number: 2 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMSCCRL*SLQTST Trigger: AGTAGATGTCTGCAGAGACCAGAGGCGGCAACAGCT...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGAGCTGTTGCCGCCTCTaGTCTCTGCAGACATCTACT | + |
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Preference number: 2 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKSCCRL*SLQTST Trigger: AGTAGATGTCTGCAGAGACCAGAGGCGGCAACAGCT...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| 3UTR CAA 90 bp | TCCTTCCGAGTCAGGCTCTTCCCTTGCTCAGATACAAACAGAGCTTaGACATCCTTCACAGGGAGCAACTGTTCCTTGTGCTGCTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SFRVRLFPCSDTNRA*TSFTGSNCSLCCLQ Trigger: CTGCAAGCAGCACAAGGAACAGTTGCTCCCTGTGAAGGATGTCAAAGCTCTGTTTGTATCTGAGCAAGGGAAGAGCCTGACTCGGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCGAGGGTACCAGCTGTTaGCGCCTCTGGTCTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SLQEALYRKPKSSSLSLSEGTSC*RLWSLQ Trigger: CTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTC...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| 3UTR CAA 90 bp | GTCCCCATTCTTGATGTACACCTCCTTCCGAGTCAGGCTCTTCCCTaGCTCAGATACAAACAGAGCTTTGACATCCTTCACAGGGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: VPILDVHLLPSQALP*LRYKQSFDILHREQ Trigger: TTGCTCCCTGTGAAGGATGTCAAAGCTCTGTTTGTATCTGAGCAAGGGAAGAGCCTGACTCGGAAGGAGGTGTACATCAAGAATGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| 3UTR CAA 90 bp | CTCTCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTaGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATG | + |
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Preference number: 2 (lower is better) Translates to: LSLQEALYRKPKSSS*SLSFSQGSTWKRLM Trigger: CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| 3UTR CAA 90 bp | CTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTaGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LQEALYRKPKSSSLS*SFSQGSTWKRLMWK Trigger: CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCAGCTGTTGCCGCCTCTaGTCTCTGCAGACATCTACT | + |
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Preference number: 2 (lower is better) Translates to: SLQEALYRKPKSSSLSLSSCCRL*SLQTST Trigger: AGTAGATGTCTGCAGAGACCAGAGGCGGCAACAGCT...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| 3UTR TCA 72 bp | AGCAACTGTTCCTTGTGCTGCTTGCAGGTGGCTGTCTaGGGAAGCCTCAAGGCTCGTGTGGTTCCCTCCGTG | + |
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Preference number: 3 (lower is better) Translates to: SNCSLCCLQVAV*GSLKARVVPSV Trigger: CACGGAGGGAACCACACGAGCCTTGAGGCTTCCTCAGACAGCCACCTGCAAGCAGCACAAGGAACAGTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| 3UTR CCA 72 bp | AGCATAGGGATCCACCCCTCCTGTGCAGAGGAACCGTaGAGTGACCACCTCAGAGGCATCTTTGACCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SIGIHPSCAEEP*SDHLRGIFDLL Trigger: GAGAAGGTCAAAGATGCCTCTGAGGTGGTCACTCCACGGTTCCTCTGCACAGGAGGGGTGGATCCCTATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGAGAGGGTACCAGCTGTaGCCGCCTCTGGTCTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKRGYQL*PPLVSA Trigger: TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCT...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| 3UTR-3UTR CAA 90 bp | ATCCACCCCTCCTGTGCAGAGGAACCGTGGAGTGACCACCTCAGAGGCATCTTTGATACAAACAGAGCTTaGACATCCTTCACAGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: IHPSCAEEPWSDHLRGIFDTNRA*TSFTGS Trigger: GCTCCCTGTGAAGGATGTCAAAGCTCTGTTTGTATC...AAAGATGCCTCTGAGGTGGTCACTCCACGGTTCCTCTGCACAGGAGGGGTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| 3UTR GCA 72 bp | TTGATGTACACCTCCTTCCGAGTCAGGCTCTTCCCTTaGTCAGATACAAACAGAGCTTTGACATCCTTCACA | + |
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Preference number: 3 (lower is better) Translates to: LMYTSFRVRLFP*SDTNRALTSFT Trigger: TGTGAAGGATGTCAAAGCTCTGTTTGTATCTGAGCAAGGGAAGAGCCTGACTCGGAAGGAGGTGTACATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| 3UTR TCA 72 bp | AGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTaGGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RKLFIENPNPHL*ACPLARAAPGR Trigger: TCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR TCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAAAGCGGCTTCTCTTGTaGACAATGAGAGGGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAKRLLL*TMRGPP Trigger: CGGGGGCCCTCTCATTGTTCACAAGAGAAGCCGCTT...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR GCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAAGGCGGGGCATCCCCTaGCCAGCTCATCATGCTATA | + |
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Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSARRGIP*PAHHAI Trigger: TATAGCATGATGAGCTGGGCAGGGGATGCCCCGCCT...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATAGAGAGCAGGAGACTTaGGGCCGGGCCTCAAGCACT | + |
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Preference number: 4 (lower is better) Translates to: SPGHKRVPAVAASGLCRHREQET*GRASST Trigger: AGTGCTTGAGGCCCGGCCCCAAGTCTCCTGCTCTCT...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR TCA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACCGCCTTGGAGAAGTTaGAAGGAGCCGCCTTTGATC | + |
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Preference number: 4 (lower is better) Translates to: GSPGHKRVPAVAASGLCRPPWRS*KEPPLI Trigger: GATCAAAGGCGGCTCCTTTCAACTTCTCCAAGGCGG...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR TCA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGAAGAGGAACCGTGGAGTaGCCACCTCAGAGGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: GSPGHKRVPAVAASGLCRRGTVE*PPQRHL Trigger: AAGATGCCTCTGAGGTGGTCACTCCACGGTTCCTCT...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR GCA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATTGTTCTCCTGGGCTGTaGCCATCCTCAGCATCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SPGHKRVPAVAASGLCRHCSPGL*PSSASA Trigger: AGCCGATGCTGAGGATGGGCACAGCCCAGGAGAACA...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR GCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACTCCACCATGAAGCAGTaGGCTGCTGTCAGCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADSTMKQ*AAVSTK Trigger: CTTCGTGCTGACAGCAGCGCACTGCTTCATGGTGGA...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGAAGTCTGCACGGGGTATaGGTAGAAGCCAGAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: GSPGHKRVPAVAASGLCRSLHGV*VEARGT Trigger: TGTCCCTCTGGCTTCTACCCATACCCCGTGCAGACT...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAAGTCTGCACGGGGTATaGGTAGAAGCCAGAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSASLHGV*VEARGT Trigger: TGTCCCTCTGGCTTCTACCCATACCCCGTGCAGACT...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCACCTGGAGAGCCCTCTTaGTGTTGGTCCCTGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAPGEPS*CWSLTS Trigger: TGAAGTCAGGGACCAACACCAAGAGGGCTCTCCAGG...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCACCTCCCTGGGATTTTTaGGATCCCTGCCGATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAPPWDF*DPCRCP Trigger: TGGACATCGGCAGGGATCCCAAAAATCCCAGGGAGG...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACGTAGGGGAAAGATGCTaGGCCTGTGGACTTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADVGERC*ACGLAA Trigger: TGCTGCAAGTCCACAGGCCCAGCATCTTTCCCCTAC...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153400.8 |
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| CDS-3UTR TCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACCTCTGTCCCACTCCATaGGCCACCTTCTTGACACTT | + |
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Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADLCPTP*ATFLTL Trigger: AAGTGTCAAGAAGGTGGCTCATGGAGTGGGACAGAG...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR TCA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGAGCTTCGGCCACTTCTTaGGGGCTGTCATACATGAAG | + |
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Preference number: 4 (lower is better) Translates to: GSPGHKRVPAVAASGLCRASATS*GLSYMK Trigger: CTTCATGTATGACAGCCCTCAAGAAGTGGCCGAAGC...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR TCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACCCTCAGAGGCATCTTTaGCCTTCTCATAGCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADPQRHL*PSHSLG Trigger: CCCAAGGCTATGAGAAGGTCAAAGATGCCTCTGAGG...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR GCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACGATTTTTGGGATCCCTaGCGATGTCCAGCAAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADDFWDP*RCPARL Trigger: GAGCCTTGCTGGACATCGGCAGGGATCCCAAAAATC...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR GCA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATTCCACCATGAAGCAGTaGGCTGCTGTCAGCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: SPGHKRVPAVAASGLCRHSTMKQ*AAVSTK Trigger: CTTCGTGCTGACAGCAGCGCACTGCTTCATGGTGGA...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACGAGCCCTCTTGGTGTTaGTCCCTGACTTCAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADEPSWC*SLTSAC Trigger: ACAAGCTGAAGTCAGGGACCAACACCAAGAGGGCTC...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGAGCCCTCTTGGTGTTaGTCCCTGACTTCAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAEPSWC*SLTSAC Trigger: ACAAGCTGAAGTCAGGGACCAACACCAAGAGGGCTC...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATCCTCCCTGGGATTTTTaGGATCCCTGCCGATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SPGHKRVPAVAASGLCRHPPWDF*DPCRCP Trigger: TGGACATCGGCAGGGATCCCAAAAATCCCAGGGAGG...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACCAGGTAATCCTCCCTaGGATTTTTGGGATCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: GSPGHKRVPAVAASGLCRPGNPP*DFWDPC Trigger: GCAGGGATCCCAAAAATCCCAGGGAGGATTACCTGG...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACCCAGGTAATCCTCCCTaGGATTTTTGGGATCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADPGNPP*DFWDPC Trigger: GCAGGGATCCCAAAAATCCCAGGGAGGATTACCTGG...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR TCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACTCTCATCAGACACTCTaGCCAACACTTTGGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADSHQTL*PTLWGL Trigger: CAGTCCCCAAAGTGTTGGTCAGAGTGTCTGATGAGA...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCATGGAAGCTAAGGCATTaGTGTTCACGGAGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAWKLRH*CSRSPP Trigger: TGGTGGACTCCGTGAACATCAATGCCTTAGCTTCCA...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGATCTTGTCCCCATTCTTaGTGTACACCTCCTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSPGHKRVPAVAASGLCRSCPHS*CTPPSE Trigger: CTCGGAAGGAGGTGTACATCAAGAATGGGGACAAGA...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCATCACAAATTGCTGTTTaGCCATCCCACCGGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSASQIAV*PSHRPF Trigger: GAATGGCCGGTGGGATGGGCAAACAGCAATTTGTGA...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGATCACAAATTGCTGTTTaGCCATCCCACCGGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPGHKRVPAVAASGLCRSQIAV*PSHRPF Trigger: GAATGGCCGGTGGGATGGGCAAACAGCAATTTGTGA...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGAACAATCTTCCTCTTCTaGTGTTCTCCTGGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSPGHKRVPAVAASGLCRTIFLF*CSPGLC Trigger: GCACAGCCCAGGAGAACAGCAGAAGAGGAAGATTGT...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATCTGCCCAGCTCATCATaGTATACACAGCCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPGHKRVPAVAASGLCRHLPSSS*YTQPGE Trigger: CTCTCCAGGCTGTGTATAGCATGATGAGCTGGGCAG...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCATCTTCAAGGCGGTATTaGCTACCCACCTTCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSASSRRY*LPTFLV Trigger: GACAAGGAAGGTGGGTAGCCAATACCGCCTTGAAGA...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACTCCTTTGCATGTGTTaGGGTCAGCATAGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSPGHKRVPAVAASGLCRLLCMC*GQHRDP Trigger: TGGATCCCTATGCTGACCCCAACACATGCAAAGGAG...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATGAGGGCTGTCATACATaGAGGAATCTTGGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPGHKRVPAVAASGLCRHEGCHT*RNLGRK Trigger: CTTCCTGCCAAGATTCCTTCATGTATGACAGCCCTC...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATTGGAAGCTAAGGCATTaGTGTTCACGGAGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGHKRVPAVAASGLCRHWKLRH*CSRSPP Trigger: TGGTGGACTCCGTGAACATCAATGCCTTAGCTTCCA...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCATCCATCATCACAAATTaGTGTTTGCCCATCCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSASIITN*CLPIPP Trigger: CGGTGGGATGGGCAAACAGCAATTTGTGATGATGGA...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCATATGCTCCCACACCATaGCACAGAGACTCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAYAPTP*HRDSEI Trigger: AATCTCTGAGTCTCTGTGGCATGGTGTGGGAGCATA...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141295.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACTATGCTCCCACACCATaGCACAGAGACTCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADYAPTP*HRDSEI Trigger: AATCTCTGAGTCTCTGTGGCATGGTGTGGGAGCATA...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141295.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCATACATGAAGGAATCTTaGCAGGAAGGCTCTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAYMKES*QEGSVP Trigger: TGGGACAGAGCCTTCCTGCCAAGATTCCTTCATGTA...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGATACATGAAGGAATCTTaGCAGGAAGGCTCTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSPGHKRVPAVAASGLCRYMKES*QEGSVP Trigger: TGGGACAGAGCCTTCCTGCCAAGATTCCTTCATGTA...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGAAAGCTTTGCATGTGTTaGGGTCAGCATAGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSPGHKRVPAVAASGLCRKLCMC*GQHRDP Trigger: TGGATCCCTATGCTGACCCCAACACATGCAAAGCTT...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141295.8 |
||
| CDS-3UTR TCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATACAAACAGAGCTTTaGCATCCTTCACAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADIQTEL*HPSQGA Trigger: TGCTCCCTGTGAAGGATGTCAAAGCTCTGTTTGTAT...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAATACAAACAGAGCTTTaGCATCCTTCACAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAIQTEL*HPSQGA Trigger: TGCTCCCTGTGAAGGATGTCAAAGCTCTGTTTGTAT...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGAAGCGGCTTCTCTTGTaGACAATGAGAGGGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMKRLLL*TMRGPP Trigger: CGGGGGCCCTCTCATTGTTCACAAGAGAAGCCGCTT...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGAAGCGGCTTCTCTTGTaGACAATGAGAGGGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKKRLLL*TMRGPP Trigger: CGGGGGCCCTCTCATTGTTCACAAGAGAAGCCGCTT...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATTCCATCATCACAAATTaGTGTTTGCCCATCCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SPGHKRVPAVAASGLCRHSIITN*CLPIPP Trigger: CGGTGGGATGGGCAAACAGCAATTTGTGATGATGGA...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACAGAAGAGAGAAGCTTTaGATGTGTTGGGGTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADRREKL*MCWGQH Trigger: ATGCTGACCCCAACACATGCAAAGCTTCTCTCTTCT...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141295.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGGAAAGGAGCCGCCTTTaGTCTCTACTCCCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKERSRL*SLLPPE Trigger: CTCTGGAGGGAGTAGAGATCAAAGGCGGCTCCTTTC...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGCCGCCTTGGAGAAGTTaGAAGGAGCCGCCTTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMPPWRS*KEPPLI Trigger: GATCAAAGGCGGCTCCTTTCAACTTCTCCAAGGCGG...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGCTTTCAGAGGGCGAGTaGCTGAGATCTTGGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMLSEGE*LRSWLA Trigger: GGCAAGCCAAGATCTCAGTCACTCGCCCTCTGAAAG...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141295.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR TCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGAGAGGAACCGTGGAGTaGCCACCTCAGAGGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMRGTVE*PPQRHL Trigger: AAGATGCCTCTGAGGTGGTCACTCCACGGTTCCTCT...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGAGAGGAACCGTGGAGTaGCCACCTCAGAGGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKRGTVE*PPQRHL Trigger: AAGATGCCTCTGAGGTGGTCACTCCACGGTTCCTCT...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | AATGAAGCGGCTTCTCTTGTGAACAATGAGAGGGCCCCCGGAATCTCCTTTGCATCTGACCCCAGTGACTaGGATCTTGGCTTGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NEAASLVNNERAPGISFASDPSD*DLGLPW Trigger: CCATGGCAAGCCAAGATCTCAGTCACTGGGGTCAGA...TGCAAAGGAGATTCCGGGGGCCCTCTCATTGTTCACAAGAGAAGCCGCTTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACTTTCCACCCATGTTGTaGAAGCCATCAGTCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADFPPML*KPSVIM Trigger: CATTATGACTGATGGCTTGCACAACATGGGTGGAAA...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGTCCACCATGAAGCAGTaGGCTGCTGTCAGCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKSTMKQ*AAVSTK Trigger: CTTCGTGCTGACAGCAGCGCACTGCTTCATGGTGGA...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGGCTGTAGGGGAAAGATaGTGGGCCTGTGGACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKAVGER*WACGLA Trigger: TGCAAGTCCACAGGCCCAGCATCTTTCCCCTACAGC...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153400.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGCCTGGAGAGCCCTCTTaGTGTTGGTCCCTGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKPGEPS*CWSLTS Trigger: TGAAGTCAGGGACCAACACCAAGAGGGCTCTCCAGG...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGAATAATGATGATGACATaGCGGGTTCTATTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSPGHKRVPAVAASGLCRIMMMT*RVLFQP Trigger: AGGCTGGAATAGAACCCGCCATGTCATCATCATTAT...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGCATGAGCCACCTTCTTaGCACTTTCGCTTCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKHEPPS*HFRFWE Trigger: CTCCCAGAAGCGAAAGTGTCAAGAAGGTGGCTCATG...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGCATGAGCCACCTTCTTaGCACTTTCGCTTCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMHEPPS*HFRFWE Trigger: CTCCCAGAAGCGAAAGTGTCAAGAAGGTGGCTCATG...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGGCTTCGGCCACTTCTTaGGGGCTGTCATACATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKASATS*GLSYMK Trigger: CTTCATGTATGACAGCCCTCAAGAAGTGGCCGAAGC...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGCCTCAGAGGCATCTTTaGCCTTCTCATAGCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMPQRHL*PSHSLG Trigger: CCCAAGGCTATGAGAAGGTCAAAGATGCCTCTGAGG...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGGCTTGTCCCCATTCTTaGTGTACACCTCCTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMACPHS*CTPPSE Trigger: CTCGGAAGGAGGTGTACATCAAGAATGGGGACAAGC...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCACTCAGGGATCCCTTCTaGCTTTTTCCCATTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: VEVPGIRGYQLLPPLVSALRDPF*LFPINI Trigger: AATATTAATGGGAAAAAGGCAGAAGGGATCCCTGAG...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACCTCAGGGATCCCTTCTaGCTTTTTCCCATTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: EVPGIRGYQLLPPLVSADLRDPF*LFPINI Trigger: AATATTAATGGGAAAAAGGCAGAAGGGATCCCTGAG...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGCATCGGCTCCTTCGATaGTCTCTGTCAGGGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKHRLLR*SLSGRI Trigger: TATCCTCCCTGACAGAGACCATCGAAGGAGCCGATG...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGCATCGGCTCCTTCGATaGTCTCTGTCAGGGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMHRLLR*SLSGRI Trigger: TATCCTCCCTGACAGAGACCATCGAAGGAGCCGATG...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGACAATCTTCCTCTTCTaGTGTTCTCCTGGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMTIFLF*CSPGLC Trigger: GCACAGCCCAGGAGAACAGCAGAAGAGGAAGATTGT...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATCTCAGGGATCCCTTCTaGCTTTTTCCCATTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: SPGHKRVPAVAASGLCRHLRDPF*LFPINI Trigger: AATATTAATGGGAAAAAGGCAGAAGGGATCCCTGAG...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGCTGCATTCCGCCTTCTaGACAATCTTTTGGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMLHSAF*TIFWSR Trigger: CCGAGACCAAAAGATTGTCCAGAAGGCGGAATGCAG...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGCACCTTTGCATGTGTTaGGGTCAGCATAGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMHLCMC*GQHRDP Trigger: TGGATCCCTATGCTGACCCCAACACATGCAAAGGTG...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153400.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCAAGCGGCTTCTCTTGTaGACAATGAGAGGGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSKRLLL*TMRGPP Trigger: CGGGGGCCCTCTCATTGTTCACAAGAGAAGCCGCTT...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| 3UTR CAA 72 bp | GTCAGGCTCTTCCCTTGCTCAGATACAAACAGAGCTTaGACATCCTTCACAGGGAGCAACTGTTCCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRLFPCSDTNRA*TSFTGSNCSLC Trigger: GCACAAGGAACAGTTGCTCCCTGTGAAGGATGTCAAAGCTCTGTTTGTATCTGAGCAAGGGAAGAGCCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCCTTTCAGAGGGCGAGTaGCTGAGATCTTGGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSLSEGE*LRSWLA Trigger: GGCAAGCCAAGATCTCAGTCACTCGCCCTCTGAAAG...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141295.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGATACAAACAGAGCTTTaGCATCCTTCACAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMIQTEL*HPSQGA Trigger: TGCTCCCTGTGAAGGATGTCAAAGCTCTGTTTGTAT...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGCTAATCACACCAACTTaGATGAAGCGGCTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKLITPT*MKRLLL Trigger: CAAGAGAAGCCGCTTCATTCAAGTTGGTGTGATTAG...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141295.8 |
||
| CDS-3UTR GCA 90 bp | CCGAGTCAGGCTCTTCCCTTGCTCAGATACAAACAGAGCTTTGACATCCTTCACTATGCTCCCACACCATaGCACAGAGACTCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: PSQALPLLRYKQSFDILHYAPTP*HRDSEI Trigger: AATCTCTGAGTCTCTGTGGCATGGTGTGGGAGCATA...GTGAAGGATGTCAAAGCTCTGTTTGTATCTGAGCAAGGGAAGAGCCTGACTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
||
| 3UTR CAA 72 bp | CTTGATGTACACCTCCTTCCGAGTCAGGCTCTTCCCTaGCTCAGATACAAACAGAGCTTTGACATCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDVHLLPSQALP*LRYKQSFDILH Trigger: GTGAAGGATGTCAAAGCTCTGTTTGTATCTGAGCAAGGGAAGAGCCTGACTCGGAAGGAGGTGTACATCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCCTCTGTCCCACTCCATaGGCCACCTTCTTGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSLCPTP*ATFLTL Trigger: AAGTGTCAAGAAGGTGGCTCATGGAGTGGGACAGAG...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR TCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCGCTTGTCCCCATTCTTaGTGTACACCTCCTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSACPHS*CTPPSE Trigger: CTCGGAAGGAGGTGTACATCAAGAATGGGGACAAGC...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTTTCCACCCATGTTGTaGAAGCCATCAGTCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMFPPML*KPSVIM Trigger: CATTATGACTGATGGCTTGCACAACATGGGTGGAAA...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR GCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCGATTTTTGGGATCCCTaGCGATGTCCAGCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSDFWDP*RCPARL Trigger: GAGCCTTGCTGGACATCGGCAGGGATCCCAAAAATC...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR TCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCGAGGGCTGTCATACATaGAGGAATCTTGGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSEGCHT*RNLGRK Trigger: CTTCCTGCCAAGATTCCTTCATGTATGACAGCCCTC...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR TCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCTCTCATCAGACACTCTaGCCAACACTTTGGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSSHQTL*PTLWGL Trigger: CAGTCCCCAAAGTGTTGGTCAGAGTGTCTGATGAGA...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR GCA 90 bp | TGTGCAGAGGAACCGTGGAGTGACCACCTCAGAGGCATCTTTGACCTTCTCATACTCAGGGATCCCTTCTaGCTTTTTCCCATTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: CAEEPWSDHLRGIFDLLILRDPF*LFPINI Trigger: AATATTAATGGGAAAAAGGCAGAAGGGATCCCTGAG...TATGAGAAGGTCAAAGATGCCTCTGAGGTGGTCACTCCACGGTTCCTCTGCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGCTCAGGGATCCCTTCTaGCTTTTTCCCATTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKLRDPF*LFPINI Trigger: AATATTAATGGGAAAAAGGCAGAAGGGATCCCTGAG...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCCTGCATTCCGCCTTCTaGACAATCTTTTGGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSLHSAF*TIFWSR Trigger: CCGAGACCAAAAGATTGTCCAGAAGGCGGAATGCAG...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCTCTTCAAGGCGGTATTaGCTACCCACCTTCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSSSRRY*LPTFLV Trigger: GACAAGGAAGGTGGGTAGCCAATACCGCCTTGAAGA...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCCTCCTTTGCATGTGTTaGGGTCAGCATAGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSLLCMC*GQHRDP Trigger: TGGATCCCTATGCTGACCCCAACACATGCAAAGGAG...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| 3UTR CAA 72 bp | GCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTaGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALYRKPKSSSLS*SFSQGSTWKRL Trigger: CAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| 3UTR CAA 72 bp | CAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTaGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QEALYRKPKSSS*SLSFSQGSTWK Trigger: CTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR GCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCAGTTGCTGCTTCCGATaGTGTCTGATCCATCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSSCCFR*CLIHLA Trigger: TGCTAGATGGATCAGACAGCATCGGAAGCAGCAACT...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR GCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCTATGCTCCCACACCATaGCACAGAGACTCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSYAPTP*HRDSEI Trigger: AATCTCTGAGTCTCTGTGGCATGGTGTGGGAGCATA...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141295.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCATAATGATGATGACATaGCGGGTTCTATTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALYRKPKSSSLSLSIMMMT*RVLFQP Trigger: AGGCTGGAATAGAACCCGCCATGTCATCATCATTAT...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACGCTGGGCCTGTGGACTaGCAGCATAGCCAGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EVPGIRGYQLLPPLVSADAGPVD*QHSQRA Trigger: GGCTCTCTGGCTATGCTGCAAGTCCACAGGCCCAGC...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153400.8 |
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| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCACCTCAAGCACTGGAGTaGCGCTCACACCTCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAPQALE*RSHLQR Trigger: CCTCTGGAGGTGTGAGCGCAACTCCAGTGCTTGAGG...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGCCTGGAGAGCCCTCTaGGTGTTGGTCCCTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAAWRAL*VLVPDF Trigger: GAAGTCAGGGACCAACACCAAGAGGGCTCTCCAGGC...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGAGCCTGGAGAGCCCTCTaGGTGTTGGTCCCTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSPGHKRVPAVAASGLCRAWRAL*VLVPDF Trigger: GAAGTCAGGGACCAACACCAAGAGGGCTCTCCAGGC...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS TCA 90 bp | GAATCTTGGCAGGAAGGCTCTGTCCCACTCCATGAGCCACCTTCTTaGCACTTTCGCTTCTGGGAGCCACGCAGGACAAGTCCCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESWQEGSVPLHEPPS*HFRFWEPRRTSPRL Trigger: CAGCCGGGGACTTGTCCTGCGTGGCTCCCAGAAGCGAAAGTGTCAAGAAGGTGGCTCATGGAGTGGGACAGAGCCTTCCTGCCAAGATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CCA 90 bp | TCAGGCGGGGCATCCCCTGCCCAGCTCATCATGCTATACACAGCCTaGAGAGCCCTCTTGGTGTTGGTCCCTGACTTCAGCTTGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGGASPAQLIMLYTA*RALLVLVPDFSLWS Trigger: AGACCACAAGCTGAAGTCAGGGACCAACACCAAGAGGGCTCTCCAGGCTGTGTATAGCATGATGAGCTGGGCAGGGGATGCCCCGCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATTCCTCCCTGGGATTTTaGGGATCCCTGCCGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPGHKRVPAVAASGLCRHSSLGF*GSLPMS Trigger: GGACATCGGCAGGGATCCCAAAAATCCCAGGGAGGA...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAAGAGCCACCTCACCTTaGCATGTGTTGGGGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSARATSP*HVLGSA Trigger: TGCTGACCCCAACACATGCAAAGGTGAGGTGGCTCT...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153400.8 |
||
| CDS CCA 90 bp | AGGGCCCCCGGAATCTCCTGTAGAAGAGAGAAGCTTTGCATGTGTTaGGGTCAGCATAGGGATCCACCCCTCCTGTGCAGAGGAACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RAPGISCRREKLCMC*GQHRDPPLLCRGTV Trigger: CACGGTTCCTCTGCACAGGAGGGGTGGATCCCTATGCTGACCCCAACACATGCAAAGCTTCTCTCTTCTACAGGAGATTCCGGGGGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141295.8 |
||
| CDS CCA 90 bp | TGGACTTGCAGCATAGCCAGAGAGCCACCTCACCTTTGCATGTGTTaGGGTCAGCATAGGGATCCACCCCTCCTGTGCAGAGGAACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: WTCSIAREPPHLCMC*GQHRDPPLLCRGTV Trigger: CACGGTTCCTCTGCACAGGAGGGGTGGATCCCTATGCTGACCCCAACACATGCAAAGGTGAGGTGGCTCTCTGGCTATGCTGCAAGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153400.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAACCTTCTCAATCAAGTaGGTGAGGCACCGCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSATFSIK*VRHRLA Trigger: GGCTAAGCGGTGCCTCACCAACTTGATTGAGAAGGT...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATAGAGCCCTCTTGGTGTaGGTCCCTGACTTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPGHKRVPAVAASGLCRHRALLV*VPDFSL Trigger: CAAGCTGAAGTCAGGGACCAACACCAAGAGGGCTCT...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGGCTTGTCCCCATTCTaGATGTACACCTCCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAGLSPF*MYTSFR Trigger: TCGGAAGGAGGTGTACATCAAGAATGGGGACAAGCC...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS GCA 90 bp | ATTGCTCTGCATTCCGCCTTCTGGACAATCTTTTGGTCTCGGGTCTaGAGGTCGCTCCAGGAGCCTGTGGATCTGCAGGTTCGAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IALHSAFWTIFWSRV*RSLQEPVDLQVRVC Trigger: GCAGACTCGAACCTGCAGATCCACAGGCTCCTGGAGCGACCTGCAGACCCGAGACCAAAAGATTGTCCAGAAGGCGGAATGCAGAGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATGTCTTCAAGGCGGTATaGGCTACCCACCTTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPGHKRVPAVAASGLCRHVFKAV*ATHLPC Trigger: ACAAGGAAGGTGGGTAGCCAATACCGCCTTGAAGAC...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATACATGAAGGAATCTaGGCAGGAAGGCTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EVPGIRGYQLLPPLVSADIHEGI*AGRLCP Trigger: GGGACAGAGCCTTCCTGCCAAGATTCCTTCATGTAT...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCATGCTTCGGCCACTTCTaGAGGGCTGTCATACATGAA | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSACFGHF*RAVIHE Trigger: TTCATGTATGACAGCCCTCAAGAAGTGGCCGAAGCA...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGAAGTCAGGCTCTTCCCTaGCTCAGATACAAACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSPGHKRVPAVAASGLCRSQALP*LRYKQS Trigger: GCTCTGTTTGTATCTGAGCAAGGGAAGAGCCTGACT...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAAGTCAGGCTCTTCCCTaGCTCAGATACAAACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSASQALP*LRYKQS Trigger: GCTCTGTTTGTATCTGAGCAAGGGAAGAGCCTGACT...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACCTTCTCATAGCCTaGGGCCTTTGTAGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSADLLIA*GLCSIS Trigger: AGAGATGCTACAAAGGCCCAAGGCTATGAGAAGGTC...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACGACCTTCTCATAGCCTaGGGCCTTTGTAGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EVPGIRGYQLLPPLVSADDLLIA*GLCSIS Trigger: AGAGATGCTACAAAGGCCCAAGGCTATGAGAAGGTC...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATGGCTTGTCCCCATTCTaGATGTACACCTCCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SPGHKRVPAVAASGLCRHGLSPF*MYTSFR Trigger: TCGGAAGGAGGTGTACATCAAGAATGGGGACAAGCC...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAACTCTGACCAACACTTaGGGGACTGTAGCATATGTC | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSATLTNT*GTVAYV Trigger: GACATATGCTACAGTCCCCAAAGTGTTGGTCAGAGT...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GCATGTGTTGGGGTCAGCATAGGGATCCACCCCTCCTGTGCAGAGGAACCGTGGCTTGGCTTGCCATGGTaGCTTATGATAATCGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ACVGVSIGIHPSCAEEPWLGLPW*LMIIVA Trigger: GGCAACGATTATCATAAGCAACCATGGCAAGCCAAG...CCACGGTTCCTCTGCACAGGAGGGGTGGATCCCTATGCTGACCCCAACACATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACTTGGCTTGCCATGGTaGCTTATGATAATCGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSPGHKRVPAVAASGLCRLGLPW*LMIIVA Trigger: GGCAACGATTATCATAAGCAACCATGGCAAGCCAAG...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141295.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGATACAAACAGAGCTTaGACATCCTTCACAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSADTNRA*TSFTGS Trigger: GCTCCCTGTGAAGGATGTCAAAGCTCTGTTTGTATC...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATAGTCAGGCTCTTCCCTaGCTCAGATACAAACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPGHKRVPAVAASGLCRHSQALP*LRYKQS Trigger: GCTCTGTTTGTATCTGAGCAAGGGAAGAGCCTGACT...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACTTCTTGTCCCCATTCTaGATGTACACCTCCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: EVPGIRGYQLLPPLVSADFLSPF*MYTSFR Trigger: TCGGAAGGAGGTGTACATCAAGAATGGGGACAAGAA...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATGACCTTCTCATAGCCTaGGGCCTTTGTAGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPGHKRVPAVAASGLCRHDLLIA*GLCSIS Trigger: AGAGATGCTACAAAGGCCCAAGGCTATGAGAAGGTC...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS GCA 90 bp | GTAGAAGAGAGAAGCTGTAGGGGAAAGATGCTGGGCCTGTGGACTTaGAGCATAGCCAGAGAGCCACCTCACCTTTGCATGTGTTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VEERSCRGKMLGLWT*SIAREPPHLCMCWG Trigger: ACCCCAACACATGCAAAGGTGAGGTGGCTCTCTGGCTATGCTGCAAGTCCACAGGCCCAGCATCTTTCCCCTACAGCTTCTCTCTTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153400.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATACTCTGACCAACACTTaGGGGACTGTAGCATATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPGHKRVPAVAASGLCRHTLTNT*GTVAYV Trigger: GACATATGCTACAGTCCCCAAAGTGTTGGTCAGAGT...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATTTCTTGTCCCCATTCTaGATGTACACCTCCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SPGHKRVPAVAASGLCRHFLSPF*MYTSFR Trigger: TCGGAAGGAGGTGTACATCAAGAATGGGGACAAGAA...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCATCACAACTGGCTTTCTaGTCCCCATTCTTGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSASQLAF*SPFLMY Trigger: GTACATCAAGAATGGGGACAAGAAAGCCAGTTGTGA...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 |
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| CDS TCA 90 bp | GGATTTTTGGGATCCCTGCCGATGTCCAGCAAGGCTCGGATGTCCTaGATGACAGTGACAGGGTTTCCACCCATGTTGTGCAAGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GFLGSLPMSSKARMS*MTVTGFPPMLCKPS Trigger: TGATGGCTTGCACAACATGGGTGGAAACCCTGTCACTGTCATTCAGGACATCCGAGCCTTGCTGGACATCGGCAGGGATCCCAAAAATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS GCA 90 bp | GACCTTGATGGAATGTTTCTGATCATCCACCATGAAGCAGTGCGCTaGTGTCAGCACGAAGTACTCAGACACCACGGCCCCCATACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: DLDGMFLIIHHEAVR*CQHEVLRHHGPHTG Trigger: ACCTGTATGGGGGCCGTGGTGTCTGAGTACTTCGTGCTGACAGCAGCGCACTGCTTCATGGTGGATGATCAGAAACATTCCATCAAGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CCA 90 bp | TCTCCTGTAGAAGAGAGAAGCTGTAGGGGAAAGATGCTGGGCCTGTaGACTTGCAGCATAGCCAGAGAGCCACCTCACCTTTGCATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPVEERSCRGKMLGL*TCSIAREPPHLCMC Trigger: ACACATGCAAAGGTGAGGTGGCTCTCTGGCTATGCTGCAAGTCCACAGGCCCAGCATCTTTCCCCTACAGCTTCTCTCTTCTACAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153400.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGTCTTCATAACTGATTaGGTTGAGCTTCTCTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAVFITD*VELLCD Trigger: GTCACAGAGAAGCTCAACCAAATCAGTTATGAAGAC...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATTCACAACTGGCTTTCTaGTCCCCATTCTTGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SPGHKRVPAVAASGLCRHSQLAF*SPFLMY Trigger: GTACATCAAGAATGGGGACAAGAAAGCCAGTTGTGA...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 |
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| CDS TCA 90 bp | TCGATGGTCTCTGTCAGGGAGGATAGGAATGCTTCGGCCACTTCTTaGGGGCTGTCATACATGAAGGAATCTTGGCAGGAAGGCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SMVSVREDRNASATS*GLSYMKESWQEGSV Trigger: GACAGAGCCTTCCTGCCAAGATTCCTTCATGTATGACAGCCCTCAAGAAGTGGCCGAAGCATTCCTATCCTCCCTGACAGAGACCATCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGACCGCCTTGGAGAAGTaGAAAGGAGCCGCCTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKTALEK*KGAAFD Trigger: ATCAAAGGCGGCTCCTTTCAACTTCTCCAAGGCGGT...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGACCGCCTTGGAGAAGTaGAAAGGAGCCGCCTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMTALEK*KGAAFD Trigger: ATCAAAGGCGGCTCCTTTCAACTTCTCCAAGGCGGT...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGGTCTTCAAGGCGGTATaGGCTACCCACCTTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMVFKAV*ATHLPC Trigger: ACAAGGAAGGTGGGTAGCCAATACCGCCTTGAAGAC...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGTTAGCCCCTGTGAAGTaGCTGCTTCCGATGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKLAPVK*LLPMLS Trigger: AGACAGCATCGGAAGCAGCAACTTCACAGGGGCTAA...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGACCTTCTCAATCAAGTaGGTGAGGCACCGCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKTFSIK*VRHRLA Trigger: GGCTAAGCGGTGCCTCACCAACTTGATTGAGAAGGT...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATTGCTCATTGTCCTTTTaGGAAGCTAAGGCATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPGHKRVPAVAASGLCRHCSLSF*EAKALM Trigger: CATCAATGCCTTAGCTTCCAAAAAGGACAATGAGCA...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACCAGAGACTCAGAGATTaGGTTTCATCAATCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EVPGIRGYQLLPPLVSADQRLRD*VSSIIW Trigger: CCAAATGATTGATGAAACCAAATCTCTGAGTCTCTG...GTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141295.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS TCA 90 bp | TGGGCCTTTGTAGCATCTCTCTCACAACTGGCTTGTCCCCATTCTTaGTGTACACCTCCTTCCGAGTCAGGCTCTTCCCTTGCTCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: WAFVASLSQLACPHS*CTPPSESGSSLAQI Trigger: TATCTGAGCAAGGGAAGAGCCTGACTCGGAAGGAGGTGTACATCAAGAATGGGGACAAGCCAGTTGTGAGAGAGATGCTACAAAGGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CCA 90 bp | TGCTTCCGATGCTGTCTGATCCATCTAGCACCAGGTAGATATTCATaGAGCCCGAGGGGTCTAGGACAATCTTCCTCTTCTGCTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CFRCCLIHLAPGRYS*SPRGLGQSSSSAVL Trigger: GAGAACAGCAGAAGAGGAAGATTGTCCTAGACCCCTCGGGCTCCATGAATATCTACCTGGTGCTAGATGGATCAGACAGCATCGGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGTAACCATCATAGCATaGAAAAGAAATCTGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: VEVPGIRGYQLLPPLVSAVTIIA*KRNLVT Trigger: AGTGACCAGATTTCTTTTCAATGCTATGATGGTTAC...TGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGCTCCATCATCACAAATaGCTGTTTGCCCATCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKLHHHK*LFAHPT Trigger: GGTGGGATGGGCAAACAGCAATTTGTGATGATGGAG...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGATACATGAAGGAATCTaGGCAGGAAGGCTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKIHEGI*AGRLCP Trigger: GGGACAGAGCCTTCCTGCCAAGATTCCTTCATGTAT...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGAGGTTTCATCAATCATTaGGTAGAAAACATTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSPGHKRVPAVAASGLCRGFINH*VENILQ Trigger: CTGGAGAATGTTTTCTACCAAATGATTGATGAAACC...TCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCCGGGCATAAGAGGGTACCAGCTGTTGCCGCCTCTGGTCTCTGCAGACATCAGAGACTCAGAGATTaGGTTTCATCAATCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGHKRVPAVAASGLCRHQRLRD*VSSIIW Trigger: CCAAATGATTGATGAAACCAAATCTCTGAGTCTCTG...ATGTCTGCAGAGACCAGAGGCGGCAACAGCTGGTACCCTCTTATGCCCGGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141295.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGGACCTTCTCATAGCCTaGGGCCTTTGTAGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKDLLIA*GLCSIS Trigger: AGAGATGCTACAAAGGCCCAAGGCTATGAGAAGGTC...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCCTGTGCAGAGGAACCGTGGAGTGACCACCTCAGAGGCATCTTTGACCTTCAGAGACTCAGAGATTaGGTTTCATCAATCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSCAEEPWSDHLRGIFDLQRLRD*VSSIIW Trigger: CCAAATGATTGATGAAACCAAATCTCTGAGTCTCTG...AAGGTCAAAGATGCCTCTGAGGTGGTCACTCCACGGTTCCTCTGCACAGGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
||
| CDS TCA 90 bp | CATCATGCTATACACAGCCTGGAGAGCCCTCTTGGTGTTGGTCCCTaGCTTCAGCTTGTGGTCTTCATAACTGATTTGGTTGAGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HHAIHSLESPLGVGP*LQLVVFITDLVELL Trigger: GAGAAGCTCAACCAAATCAGTTATGAAGACCACAAGCTGAAGTCAGGGACCAACACCAAGAGGGCTCTCCAGGCTGTGTATAGCATGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCAGAGCCCTCTTGGTGTaGGTCCCTGACTTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLQEALYRKPKSSSLSLSRALLV*VPDFSL Trigger: CAAGCTGAAGTCAGGGACCAACACCAAGAGGGCTCT...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCTTAGCCCCTGTGAAGTaGCTGCTTCCGATGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLQEALYRKPKSSSLSLSLAPVK*LLPMLS Trigger: AGACAGCATCGGAAGCAGCAACTTCACAGGGGCTAA...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | TCCTCATCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGGTCTTCATAACTGATTaGGTTGAGCTTCTCTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLSLSFSQGSTWKRLMVFITD*VELLCD Trigger: GTCACAGAGAAGCTCAACCAAATCAGTTATGAAGAC...CATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGATGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCCTCCATCATCACAAATaGCTGTTTGCCCATCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SLQEALYRKPKSSSLSLSLHHHK*LFAHPT Trigger: GGTGGGATGGGCAAACAGCAATTTGTGATGATGGAG...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGCAGAGACTCAGAGATTaGGTTTCATCAATCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKQRLRD*VSSIIW Trigger: CCAAATGATTGATGAAACCAAATCTCTGAGTCTCTG...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141295.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCAGTCAGGCTCTTCCCTaGCTCAGATACAAACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLQEALYRKPKSSSLSLSSQALP*LRYKQS Trigger: GCTCTGTTTGTATCTGAGCAAGGGAAGAGCCTGACT...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGGTAACCATCATAGCATaGAAAAGAAATCTGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKVTIIA*KRNLVT Trigger: AGTGACCAGATTTCTTTTCAATGCTATGATGGTTAC...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | GATGTACACCTCCTTCCGAGTCAGGCTCTTCCCTTGCTCAGATACAAACAGAGCGGTTTCATCAATCATTaGGTAGAAAACATTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DVHLLPSQALPLLRYKQSGFINH*VENILQ Trigger: CTGGAGAATGTTTTCTACCAAATGATTGATGAAACC...GCTCTGTTTGTATCTGAGCAAGGGAAGAGCCTGACTCGGAAGGAGGTGTACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133127.2 |
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| CDS-3UTR CAA 90 bp | TCTTTGAGCTTGTCCTTTAGCCAGGGCAGCACCTGGAAGAGGTTGATGTGGAAGGGTTTCATCAATCATTaGGTAGAAAACATTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSFSQGSTWKRLMWKGFINH*VENILQ Trigger: CTGGAGAATGTTTTCTACCAAATGATTGATGAAACC...CTTCCACATCAACCTCTTCCAGGTGCTGCCCTGGCTAAAGGACAAGCTCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCCTTGGCTTGCCATGGTaGCTTATGATAATCGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLQEALYRKPKSSSLSLSLGLPW*LMIIVA Trigger: GGCAACGATTATCATAAGCAACCATGGCAAGCCAAG...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141295.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS-3UTR CAA 90 bp | TCCCTGCAGGAAGCTCTTTATAGAAAACCCAAATCCTCATCTTTGAGCTTGTCCGATACAAACAGAGCTTaGACATCCTTCACAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLQEALYRKPKSSSLSLSDTNRA*TSFTGS Trigger: GCTCCCTGTGAAGGATGTCAAAGCTCTGTTTGTATC...GGACAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS GCA 72 bp | AGCCTTCAGGCGGGGCATCCCCTGCCCAGCTCATCATaGTATACACAGCCTGGAGAGCCCTCTTGGTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLQAGHPLPSSS*YTQPGEPSWCW Trigger: CCAACACCAAGAGGGCTCTCCAGGCTGTGTATAGCATGATGAGCTGGGCAGGGGATGCCCCGCCTGAAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CCA 72 bp | CTGGGCTGTGCCCATCCTCAGCATCGGCTCCTTCGATaGTCTCTGTCAGGGAGGATAGGAATGCTTCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGCAHPQHRLLR*SLSGRIGMLRP Trigger: TGGCCGAAGCATTCCTATCCTCCCTGACAGAGACCATCGAAGGAGCCGATGCTGAGGATGGGCACAGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS GCA 72 bp | ATGGAGCCCGAGGGGTCTAGGACAATCTTCCTCTTCTaGTGTTCTCCTGGGCTGTGCCCATCCTCAGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: MEPEGSRTIFLF*CSPGLCPSSAS Trigger: CGATGCTGAGGATGGGCACAGCCCAGGAGAACAGCAGAAGAGGAAGATTGTCCTAGACCCCTCGGGCTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CCA 72 bp | GGTCGTGGGCAGCGTATTGCTCTGCATTCCGCCTTCTaGACAATCTTTTGGTCTCGGGTCTGCAGGTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GRGQRIALHSAF*TIFWSRVCRSL Trigger: GAGCGACCTGCAGACCCGAGACCAAAAGATTGTCCAGAAGGCGGAATGCAGAGCAATACGCTGCCCACGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CCA 72 bp | GCATCCCCTGCCCAGCTCATCATGCTATACACAGCCTaGAGAGCCCTCTTGGTGTTGGTCCCTGACTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASPAQLIMLYTA*RALLVLVPDFS Trigger: GCTGAAGTCAGGGACCAACACCAAGAGGGCTCTCCAGGCTGTGTATAGCATGATGAGCTGGGCAGGGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS TCA 72 bp | CCTGACCGCCTTGGAGAAGTTGAAAGGAGCCGCCTTTaGTCTCTACTCCCTCCAGAGAGCAGGAGACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PDRLGEVERSRL*SLLPPESRRLG Trigger: CCCAAGTCTCCTGCTCTCTGGAGGGAGTAGAGATCAAAGGCGGCTCCTTTCAACTTCTCCAAGGCGGTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS TCA 72 bp | GGATCCCTGCCGATGTCCAGCAAGGCTCGGATGTCCTaGATGACAGTGACAGGGTTTCCACCCATGTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSLPMSSKARMS*MTVTGFPPMLC Trigger: GCACAACATGGGTGGAAACCCTGTCACTGTCATTCAGGACATCCGAGCCTTGCTGGACATCGGCAGGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS GCA 72 bp | TGGACTTGCAGCATAGCCAGAGAGCCACCTCACCTTTaGATGTGTTGGGGTCAGCATAGGGATCCACCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WTCSIAREPPHL*MCWGQHRDPPL Trigger: GAGGGGTGGATCCCTATGCTGACCCCAACACATGCAAAGGTGAGGTGGCTCTCTGGCTATGCTGCAAGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153400.8 |
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| CDS CCA 72 bp | AGCATAGCCAGAGAGCCACCTCACCTTTGCATGTGTTaGGGTCAGCATAGGGATCCACCCCTCCTGTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SIAREPPHLCMC*GQHRDPPLLCR Trigger: TCTGCACAGGAGGGGTGGATCCCTATGCTGACCCCAACACATGCAAAGGTGAGGTGGCTCTCTGGCTATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153400.8 |
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| CDS TCA 72 bp | GAAGGAATCTTGGCAGGAAGGCTCTGTCCCACTCCATaGGCCACCTTCTTGACACTTTCGCTTCTGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: EGILAGRLCPTP*ATFLTLSLLGA Trigger: GGCTCCCAGAAGCGAAAGTGTCAAGAAGGTGGCTCATGGAGTGGGACAGAGCCTTCCTGCCAAGATTCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS GCA 72 bp | GGAATGTTTCTGATCATCCACCATGAAGCAGTGCGCTaGTGTCAGCACGAAGTACTCAGACACCACGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GMFLIIHHEAVR*CQHEVLRHHGP Trigger: GGGGCCGTGGTGTCTGAGTACTTCGTGCTGACAGCAGCGCACTGCTTCATGGTGGATGATCAGAAACATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000141295.8 ENSMUST00000153400.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CCA 72 bp | GAAGAGAGAAGCTGTAGGGGAAAGATGCTGGGCCTGTaGACTTGCAGCATAGCCAGAGAGCCACCTCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: EERSCRGKMLGL*TCSIAREPPHL Trigger: AAGGTGAGGTGGCTCTCTGGCTATGCTGCAAGTCCACAGGCCCAGCATCTTTCCCCTACAGCTTCTCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153400.8 |
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| CDS GCA 72 bp | TTTCAAAGTCCTGCGGTCGTGGGCAGCGTATTGCTCTaGATTCCGCCTTCTGGACAATCTTTTGGTCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: FQSPAVVGSVLL*IPPSGQSFGLG Trigger: CCCGAGACCAAAAGATTGTCCAGAAGGCGGAATGCAGAGCAATACGCTGCCCACGACCGCAGGACTTTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CCA 72 bp | CGACCCCAAACACATACACATCCAGGTAATCCTCCCTaGGATTTTTGGGATCCCTGCCGATGTCCAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPQTHTHPGNPP*DFWDPCRCPAR Trigger: CCTTGCTGGACATCGGCAGGGATCCCAAAAATCCCAGGGAGGATTACCTGGATGTGTATGTGTTTGGGGTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 ENSMUST00000176332.2 |
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| CDS CAA 72 bp | CGGGATTGGGACAGTATCCAGCTCCATCATCACAAATaGCTGTTTGCCCATCCCACCGGCCATTCTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RDWDSIQLHHHK*LFAHPTGHSLG Trigger: GCCAAGAGAATGGCCGGTGGGATGGGCAAACAGCAATTTGTGATGATGGAGCTGGATACTGTCCCAATCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CAA 72 bp | ATCAAGTTGGTGAGGCACCGCTTAGCCCCTGTGAAGTaGCTGCTTCCGATGCTGTCTGATCCATCTAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: IKLVRHRLAPVK*LLPMLSDPSST Trigger: GGTGCTAGATGGATCAGACAGCATCGGAAGCAGCAACTTCACAGGGGCTAAGCGGTGCCTCACCAACTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CAA 90 bp | CAGTCGGCATCGCTACTCCTCTCATCAGACACTCTGACCAACACTTaGGGGACTGTAGCATATGTCAGGAGACCATATCGTGGCCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: QSASLLLSSDTLTNT*GTVAYVRRPYRGLT Trigger: GGTGAGGCCACGATATGGTCTCCTGACATATGCTACAGTCCCCAAAGTGTTGGTCAGAGTGTCTGATGAGAGGAGTAGCGATGCCGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CAA 90 bp | CCGTGGAGTGACCACCTCAGAGGCATCTTTGACCTTCTCATAGCCTaGGGCCTTTGTAGCATCTCTCTCACAACTGGCTTGTCCCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: PWSDHLRGIFDLLIA*GLCSISLTTGLSPF Trigger: GAATGGGGACAAGCCAGTTGTGAGAGAGATGCTACAAAGGCCCAAGGCTATGAGAAGGTCAAAGATGCCTCTGAGGTGGTCACTCCACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CCA 72 bp | ACACATACACATCCAGGTAATCCTCCCTGGGATTTTTaGGATCCCTGCCGATGTCCAGCAAGGCTCGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: THTHPGNPPWDF*DPCRCPARLGC Trigger: ACATCCGAGCCTTGCTGGACATCGGCAGGGATCCCAAAAATCCCAGGGAGGATTACCTGGATGTGTATGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 ENSMUST00000176332.2 |
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| CDS CCA 72 bp | GGAATCTCCTGTAGAAGAGAGAAGCTTTGCATGTGTTaGGGTCAGCATAGGGATCCACCCCTCCTGTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GISCRREKLCMC*GQHRDPPLLCR Trigger: TCTGCACAGGAGGGGTGGATCCCTATGCTGACCCCAACACATGCAAAGCTTCTCTCTTCTACAGGAGATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141295.8 |
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| CDS CAA 72 bp | CAGCTCATCATGCTATACACAGCCTGGAGAGCCCTCTaGGTGTTGGTCCCTGACTTCAGCTTGTGGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QLIMLYTAWRAL*VLVPDFSLWSS Trigger: TGAAGACCACAAGCTGAAGTCAGGGACCAACACCAAGAGGGCTCTCCAGGCTGTGTATAGCATGATGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CAA 90 bp | AAGTCCCCGGCTGCAGTGGTAAGTAACAATGTCTTCAAGGCGGTATaGGCTACCCACCTTCCTTGTCCCAATAGGAATACCGGGATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KSPAAVVSNNVFKAV*ATHLPCPNRNTGIG Trigger: CCCAATCCCGGTATTCCTATTGGGACAAGGAAGGTGGGTAGCCAATACCGCCTTGAAGACATTGTTACTTACCACTGCAGCCGGGGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CAA 90 bp | TTGGGCCTTTGTAGCATCTCTCTCACAACTGGCTTGTCCCCATTCTaGATGTACACCTCCTTCCGAGTCAGGCTCTTCCCTTGCTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LGLCSISLTTGLSPF*MYTSFRVRLFPCSD Trigger: ATCTGAGCAAGGGAAGAGCCTGACTCGGAAGGAGGTGTACATCAAGAATGGGGACAAGCCAGTTGTGAGAGAGATGCTACAAAGGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS TCA 72 bp | GTAGCATCTCTCTCACAACTGGCTTGTCCCCATTCTTaGTGTACACCTCCTTCCGAGTCAGGCTCTTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VASLSQLACPHS*CTPPSESGSSL Trigger: AAGGGAAGAGCCTGACTCGGAAGGAGGTGTACATCAAGAATGGGGACAAGCCAGTTGTGAGAGAGATGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CAA 72 bp | TGTAGCATCTCTCTCACAACTGGCTTGTCCCCATTCTaGATGTACACCTCCTTCCGAGTCAGGCTCTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CSISLTTGLSPF*MYTSFRVRLFP Trigger: AGGGAAGAGCCTGACTCGGAAGGAGGTGTACATCAAGAATGGGGACAAGCCAGTTGTGAGAGAGATGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS TCA 72 bp | TCTGTCAGGGAGGATAGGAATGCTTCGGCCACTTCTTaGGGGCTGTCATACATGAAGGAATCTTGGCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SVREDRNASATS*GLSYMKESWQE Trigger: TTCCTGCCAAGATTCCTTCATGTATGACAGCCCTCAAGAAGTGGCCGAAGCATTCCTATCCTCCCTGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CCA 72 bp | TGCTGTCTGATCCATCTAGCACCAGGTAGATATTCATaGAGCCCGAGGGGTCTAGGACAATCTTCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CCLIHLAPGRYS*SPRGLGQSSSS Trigger: AGAAGAGGAAGATTGTCCTAGACCCCTCGGGCTCCATGAATATCTACCTGGTGCTAGATGGATCAGACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS TCA 72 bp | ATACACAGCCTGGAGAGCCCTCTTGGTGTTGGTCCCTaGCTTCAGCTTGTGGTCTTCATAACTGATTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: IHSLESPLGVGP*LQLVVFITDLV Trigger: AACCAAATCAGTTATGAAGACCACAAGCTGAAGTCAGGGACCAACACCAAGAGGGCTCTCCAGGCTGTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CAA 72 bp | GCTGCAGTGGTAAGTAACAATGTCTTCAAGGCGGTATaGGCTACCCACCTTCCTTGTCCCAATAGGAATACC | + |
|
Preference number: 6 (lower is better) Translates to: AAVVSNNVFKAV*ATHLPCPNRNT Trigger: GGTATTCCTATTGGGACAAGGAAGGTGGGTAGCCAATACCGCCTTGAAGACATTGTTACTTACCACTGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS TCA 72 bp | CATACAGGTCTCATGTCCTTTCAGAGGGCGAGTGACTaGGATCTTGGCTTGCCATGGTTGCTTATGATAATC | + |
|
Preference number: 6 (lower is better) Translates to: HTGLMSFQRASD*DLGLPWLLMII Trigger: GATTATCATAAGCAACCATGGCAAGCCAAGATCTCAGTCACTCGCCCTCTGAAAGGACATGAGACCTGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000141295.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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| CDS CAA 72 bp | ATTAGCAGAGCCCCGGAGAACGTAACCATCATAGCATaGAAAAGAAATCTGGTCACTCAGGTTGTAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ISRAPENVTIIA*KRNLVTQVVEG Trigger: CCCTTCTACAACCTGAGTGACCAGATTTCTTTTCAATGCTATGATGGTTACGTTCTCCGGGGCTCTGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025229.11 ENSMUST00000128767.8 ENSMUST00000154526.8 ENSMUST00000176203.9 |
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