RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP99 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000109572

Ensembl transcript IDs: ENSMUST00000207754.2

Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CTCTGGTCCAGCTCCAGCCAGTGCTGCATCTCCTCCTGCGCCCGCTaGTTTGGACGTAGGGCCCGGGGCGGTGACGTGAGCTGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: LWSSSSQCCISSCAR*FGRRARGGDVSCGA
Trigger: AGCACCGCAGCTCACGTCACCGCCCCGGGCCCTACGTCCAAATCAGCGGGCGCAGGAGGAGATGCAGCACTGGCTGGAGCTGGACCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 90 bp AGGTTCTGCCGGGCCAAGATGGCCTCCTCGTGGCTCAGCTTTCCCTaGAGCCGCCGGCACTCGCCTGCAGCCAGCTGCTCCTCTAGGTCC +
Preference number: 5 (lower is better)
Translates to: RFCRAKMASSWLSFP*SRRHSPAASCSSRS
Trigger: GGACCTAGAGGAGCAGCTGGCTGCAGGCGAGTGCCGGCGGCTTCAGGGAAAGCTGAGCCACGAGGAGGCCATCTTGGCCCGGCAGAACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 90 bp GCGGTGCTGTCTGCCTGCGGCGTTCAGCTGCCCTCTCCTCCATTTTaGGCTTCAGCTCCAGCACGCGCTCATCCTGGGAGGGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: AVLSACGVQLPSPPF*ASAPARAHPGRVSQ
Trigger: CTGGGACACCCTCCCAGGATGAGCGCGTGCTGGAGCTGAAGCGCAAAATGGAGGAGAGGGCAGCTGAACGCCGCAGGCAGACAGCACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CCA 90 bp GCCCTCTCCTCCATTTTGCGCTTCAGCTCCAGCACGCGCTCATCCTaGGAGGGTGTCCCAGGGCTTGTAGCCTGGGCCTTCTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: ALSSILRFSSSTRSS*EGVPGLVAWAFFSS
Trigger: GGAGGAAAAGAAGGCCCAGGCTACAAGCCCTGGGACACCCTCCCAGGATGAGCGCGTGCTGGAGCTGAAGCGCAAAATGGAGGAGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 90 bp TCAGCTGTCTCCTCCTTCTGCCGGTCGGCCTTCTGCTTGTTTTCCTaGATGAGGTTCTGCCGGGCCAAGATGGCCTCCTCGTGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SAVSSFCRSAFCLFS*MRFCRAKMASSWLS
Trigger: GCTGAGCCACGAGGAGGCCATCTTGGCCCGGCAGAACCTCATGCAGGAAAACAAGCAGAAGGCCGACCGGCAGAAGGAGGAGACAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CCA 90 bp GCTCCCTCTGCACCCGGGGCATGGCACACTGTAGCTCTTCCATGTTaGCTTTCAGCAGCAGCTCCTCAGCTGTCCGGCGGTTGCATGTCT +
Preference number: 5 (lower is better)
Translates to: APSAPGAWHTVALPC*LSAAAPQLSGGCMS
Trigger: AGACATGCAACCGCCGGACAGCTGAGGAGCTGCTGCTGAAAGCCAACATGGAAGAGCTACAGTGTGCCATGCCCCGGGTGCAGAGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 90 bp CTGTCTCCTCCTTCTGCCGGTCGGCCTTCTGCTTGTTTTCCTGCATaGGGTTCTGCCGGGCCAAGATGGCCTCCTCGTGGCTCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: LSPPSAGRPSACFPA*GSAGPRWPPRGSAF
Trigger: GAAAGCTGAGCCACGAGGAGGCCATCTTGGCCCGGCAGAACCTCATGCAGGAAAACAAGCAGAAGGCCGACCGGCAGAAGGAGGAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 90 bp TGCAGCATTAGCTCAGCTGTCTCCTCCTTCTGCCGGTCGGCCTTCTaGTTGTTTTCCTGCATGAGGTTCTGCCGGGCCAAGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: CSISSAVSSFCRSAF*LFSCMRFCRAKMAS
Trigger: GGAGGCCATCTTGGCCCGGCAGAACCTCATGCAGGAAAACAAGCAGAAGGCCGACCGGCAGAAGGAGGAGACAGCTGAGCTAATGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CCA 90 bp GCTTCTCCACGTCCTGTTCTTGTGGCTCCCTCTGCACCCGGGGCATaGCACACTGTAGCTCTTCCATGTTGGCTTTCAGCAGCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: ASPRPVLVAPSAPGA*HTVALPCWLSAAAP
Trigger: AGGAGCTGCTGCTGAAAGCCAACATGGAAGAGCTACAGTGTGCCATGCCCCGGGTGCAGAGGGAGCCACAAGAACAGGACGTGGAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 90 bp AGCTCTTTCATGGCCTTCTCCTCTTGCAAGCGCCTCTCAGCACACTaGAGCATTAGCTCAGCTGTCTCCTCCTTCTGCCGGTCGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SSFMAFSSCKRLSAH*SISSAVSSFCRSAF
Trigger: GAAGGCCGACCGGCAGAAGGAGGAGACAGCTGAGCTAATGCTGCAGTGTGCTGAGAGGCGCTTGCAAGAGGAGAAGGCCATGAAAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 90 bp TCCCCTTGCGTGTGGGCTGTGTCTCCATGGCACGAAGGTGAGCAATaGGCTCACAGCGACGCTTCTGTTCCTCTTTGGCTTCCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: SPCVWAVSPWHEGEQ*AHSDASVPLWLPLH
Trigger: GTGCAAAGGAAGCCAAAGAGGAACAGAAGCGTCGCTGTGAGCTCATTGCTCACCTTCGTGCCATGGAGACACAGCCCACACGCAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CCA 90 bp GTCCATAGTGGGGACAGGCTCAGGCATTGTAATGGCGCGGGGCCTTaGGACAGTCAGGTTGAATTCCTTGGGCACTGTGACTTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: VHSGDRLRHCNGAGP*DSQVEFLGHCDFGL
Trigger: AAGGCCAAAGTCACAGTGCCCAAGGAATTCAACCTGACTGTCCCAAGGCCCCGCGCCATTACAATGCCTGAGCCTGTCCCCACTATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CCA 90 bp ACAGGCAGGTATGGCCATCCCGTGCATAGAAGGCATCCACCACGATaGTCAGTAACTTGTGGTATTCAAGGCAGCCAGACAGAACCTCCA +
Preference number: 5 (lower is better)
Translates to: TGRYGHPVHRRHPPR*SVTCGIQGSQTEPP
Trigger: TGGAGGTTCTGTCTGGCTGCCTTGAATACCACAAGTTACTGACCATCGTGGTGGATGCCTTCTATGCACGGGATGGCCATACCTGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 90 bp AGGCTTATAGAAGGTCAGATTTGGAGTCCTACGGATGTGGGGTACTaGCTGATGCCACAGCTGCTTCTCCACGTCCTGTTCTTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: RLIEGQIWSPTDVGY*LMPQLLLHVLFLWL
Trigger: GAGCCACAAGAACAGGACGTGGAGAAGCAGCTGTGGCATCAGTCAGTACCCCACATCCGTAGGACTCCAAATCTGACCTTCTATAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 90 bp AGCTTCGTTTGGACTATCTTGACATTCTTCTGTGCCTCTGTGACCTaGTCCACCAGCTCTTTCATGGCCTTCTCCTCTTGCAAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: SFVWTILTFFCASVT*STSSFMAFSSCKRL
Trigger: GAGGCGCTTGCAAGAGGAGAAGGCCATGAAAGAGCTGGTGGAGCAGGTCACAGAGGCACAGAAGAATGTCAAGATAGTCCAAACGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CCA 90 bp ATCGGTTGGTACTCCCTCCAGTTGTTTGATCAGCTTCTGGACCTCTaGCTGCCATCTCAACAGAGGGTCAATCCAGTTCTCCATCACATG +
Preference number: 5 (lower is better)
Translates to: IGWYSLQLFDQLLDL*LPSQQRVNPVLHHM
Trigger: CATGTGATGGAGAACTGGATTGACCCTCTGTTGAGATGGCAGCCAGAGGTCCAGAAGCTGATCAAACAACTGGAGGGAGTACCAACCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 90 bp TCCTTGGGCACTGTGACTTTGGCCTTGGTCTTCAAGACAGGAATTTaGTCGGTTGGTACTCCCTCCAGTTGTTTGATCAGCTTCTGGACC +
Preference number: 5 (lower is better)
Translates to: SLGTVTLALVFKTGI*SVGTPSSCLISFWT
Trigger: GGTCCAGAAGCTGATCAAACAACTGGAGGGAGTACCAACCGATCAAATTCCTGTCTTGAAGACCAAGGCCAAAGTCACAGTGCCCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CCA 90 bp CACTGTGACTTTGGCCTTGGTCTTCAAGACAGGAATTTGATCGGTTaGTACTCCCTCCAGTTGTTTGATCAGCTTCTGGACCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: HCDFGLGLQDRNLIG*YSLQLFDQLLDLWL
Trigger: CAGCCAGAGGTCCAGAAGCTGATCAAACAACTGGAGGGAGTACCAACCGATCAAATTCCTGTCTTGAAGACCAAGGCCAAAGTCACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 90 bp TCTTCAAGACAGGAATTTGATCGGTTGGTACTCCCTCCAGTTGTTTaGTCAGCTTCTGGACCTCTGGCTGCCATCTCAACAGAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: SSRQEFDRLVLPPVV*SASGPLAAISTEGQ
Trigger: TTGACCCTCTGTTGAGATGGCAGCCAGAGGTCCAGAAGCTGATCAAACAACTGGAGGGAGTACCAACCGATCAAATTCCTGTCTTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 90 bp GTGTTCTGTATCATTTGGCTCTTGGCTCGTTTGTCCTGGATGATTTaGTCCCGCTTCTCCTCTTGCTCTCGTTTCTGGGTCTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: VFCIIWLLARLSWMI*SRFSSCSRFWVSLS
Trigger: GCTCAAAGAGACCCAGAAACGAGAGCAAGAGGAGAAGCGGGATCAAATCATCCAGGACAAACGAGCCAAGAGCCAAATGATACAGAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 90 bp CCACTGTGTTCTGTATCATTTGGCTCTTGGCTCGTTTGTCCTGGATaGTTTGATCCCGCTTCTCCTCTTGCTCTCGTTTCTGGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: PLCSVSFGSWLVCPG*FDPASPLALVSGSL
Trigger: AAGAGACCCAGAAACGAGAGCAAGAGGAGAAGCGGGATCAAATCATCCAGGACAAACGAGCCAAGAGCCAAATGATACAGAACACAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 90 bp CACATGGGCTGTTTCGTAGATGAGGCTCCACTCGTCTTTGATCCATaGGCTCAGGTTCAAGGGGTTAAAGAAGAATCTGAGGAACTTGCA +
Preference number: 5 (lower is better)
Translates to: HMGCFVDEAPLVFDP*AQVQGVKEESEELA
Trigger: TGCAAGTTCCTCAGATTCTTCTTTAACCCCTTGAACCTGAGCTCATGGATCAAAGACGAGTGGAGCCTCATCTACGAAACAGCCCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 90 bp GACAGAACCTCCAAAACAAACCCAAACTTCTGTGGGCTCAGAGTCTaGTGTAAGGAGGTGAATACTGTCTCCACGAATTGCTCAGGATTG +
Preference number: 5 (lower is better)
Translates to: DRTSKTNPNFCGLRV*CKEVNTVSTNCSGL
Trigger: CAATCCTGAGCAATTCGTGGAGACAGTATTCACCTCCTTACAGCAGACTCTGAGCCCACAGAAGTTTGGGTTTGTTTTGGAGGTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 72 bp AGCTCCAGCCAGTGCTGCATCTCCTCCTGCGCCCGCTaGTTTGGACGTAGGGCCCGGGGCGGTGACGTGAGC +
Preference number: 6 (lower is better)
Translates to: SSSQCCISSCAR*FGRRARGGDVS
Trigger: GCTCACGTCACCGCCCCGGGCCCTACGTCCAAATCAGCGGGCGCAGGAGGAGATGCAGCACTGGCTGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 72 bp AGGGCCCGGGGCGGTGACGTGAGCTGCGGTGCTGTCTaGCTGCGGCGTTCAGCTGCCCTCTCCTCCATTTTG +
Preference number: 6 (lower is better)
Translates to: RARGGDVSCGAV*LRRSAALSSIL
Trigger: CAAAATGGAGGAGAGGGCAGCTGAACGCCGCAGGCAGACAGCACCGCAGCTCACGTCACCGCCCCGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 72 bp GGCAGGTGCGATTTGCCTCTTGCCTTGCCCGCAGCCTaGGCTCTCGACTCTGGTCCAGCTCCAGCCAGTGCT +
Preference number: 6 (lower is better)
Translates to: GRCDLPLALPAA*ALDSGPAPASA
Trigger: AGCACTGGCTGGAGCTGGACCAGAGTCGAGAGCGCAGGCTGCGGGCAAGGCAAGAGGCAAATCGCACCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 72 bp CGTGAGCTGCGGTGCTGTCTGCCTGCGGCGTTCAGCTaGCCTCTCCTCCATTTTGCGCTTCAGCTCCAGCAC +
Preference number: 6 (lower is better)
Translates to: RELRCCLPAAFS*PLLHFALQLQH
Trigger: GTGCTGGAGCTGAAGCGCAAAATGGAGGAGAGGGCAGCTGAACGCCGCAGGCAGACAGCACCGCAGCTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 72 bp ATGGGTAGCGTGGCAGGTGCGATTTGCCTCTTGCCTTaGCCGCAGCCTGCGCTCTCGACTCTGGTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: MGSVAGAICLLP*PQPALSTLVQL
Trigger: GAGCTGGACCAGAGTCGAGAGCGCAGGCTGCGGGCAAGGCAAGAGGCAAATCGCACCTGCCACGCTACCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 72 bp GTCTGCCTGCGGCGTTCAGCTGCCCTCTCCTCCATTTaGCGCTTCAGCTCCAGCACGCGCTCATCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: VCLRRSAALSSI*RFSSSTRSSWE
Trigger: CTCCCAGGATGAGCGCGTGCTGGAGCTGAAGCGCAAAATGGAGGAGAGGGCAGCTGAACGCCGCAGGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 90 bp GGCTCCCTCTGCACCCGGGGCATGGCACACTGTAGCTCTTCCATGTaGGCTTTCAGCAGCAGCTCCTCAGCTGTCCGGCGGTTGCATGTC +
Preference number: 6 (lower is better)
Translates to: GSLCTRGMAHCSSSM*AFSSSSSAVRRLHV
Trigger: GACATGCAACCGCCGGACAGCTGAGGAGCTGCTGCTGAAAGCCAACATGGAAGAGCTACAGTGTGCCATGCCCCGGGTGCAGAGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CCA 72 bp TCCATTTTGCGCTTCAGCTCCAGCACGCGCTCATCCTaGGAGGGTGTCCCAGGGCTTGTAGCCTGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SILRFSSSTRSS*EGVPGLVAWAF
Trigger: GAAGGCCCAGGCTACAAGCCCTGGGACACCCTCCCAGGATGAGCGCGTGCTGGAGCTGAAGCGCAAAATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 72 bp TGCACCCGGGGCATGGCACACTGTAGCTCTTCCATGTaGGCTTTCAGCAGCAGCTCCTCAGCTGTCCGGCGG +
Preference number: 6 (lower is better)
Translates to: CTRGMAHCSSSM*AFSSSSSAVRR
Trigger: CCGCCGGACAGCTGAGGAGCTGCTGCTGAAAGCCAACATGGAAGAGCTACAGTGTGCCATGCCCCGGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 72 bp TCCTCCTTCTGCCGGTCGGCCTTCTGCTTGTTTTCCTaGATGAGGTTCTGCCGGGCCAAGATGGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: SSFCRSAFCLFS*MRFCRAKMASS
Trigger: CGAGGAGGCCATCTTGGCCCGGCAGAACCTCATGCAGGAAAACAAGCAGAAGGCCGACCGGCAGAAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 72 bp CGGTCGGCCTTCTGCTTGTTTTCCTGCATGAGGTTCTaGCGGGCCAAGATGGCCTCCTCGTGGCTCAGCTTT +
Preference number: 6 (lower is better)
Translates to: RSAFCLFSCMRF*RAKMASSWLSF
Trigger: AAAGCTGAGCCACGAGGAGGCCATCTTGGCCCGGCAGAACCTCATGCAGGAAAACAAGCAGAAGGCCGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 72 bp AGCTCAGCTGTCTCCTCCTTCTGCCGGTCGGCCTTCTaGTTGTTTTCCTGCATGAGGTTCTGCCGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: SSAVSSFCRSAF*LFSCMRFCRAK
Trigger: CTTGGCCCGGCAGAACCTCATGCAGGAAAACAAGCAGAAGGCCGACCGGCAGAAGGAGGAGACAGCTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 90 bp AGCATTAGCTCAGCTGTCTCCTCCTTCTGCCGGTCGGCCTTCTGCTaGTTTTCCTGCATGAGGTTCTGCCGGGCCAAGATGGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: SISSAVSSFCRSAFC*FSCMRFCRAKMASS
Trigger: CGAGGAGGCCATCTTGGCCCGGCAGAACCTCATGCAGGAAAACAAGCAGAAGGCCGACCGGCAGAAGGAGGAGACAGCTGAGCTAATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 72 bp CGCTGTAGCAACTCCCGGCTCTCCTCTATCACCTCCTaGACTATCTGCTGCCGGCCCTTCACGAGCTTCGTT +
Preference number: 6 (lower is better)
Translates to: RCSNSRLSSITS*TICCRPFTSFV
Trigger: AACGAAGCTCGTGAAGGGCCGGCAGCAGATAGTTCAGGAGGTGATAGAGGAGAGCCGGGAGTTGCTACAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 72 bp CCCTTGCGTGTGGGCTGTGTCTCCATGGCACGAAGGTaGGCAATGAGCTCACAGCGACGCTTCTGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: PLRVGCVSMARR*AMSSQRRFCSS
Trigger: AGAGGAACAGAAGCGTCGCTGTGAGCTCATTGCTCACCTTCGTGCCATGGAGACACAGCCCACACGCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 72 bp TCAGCTGTCTCCTCCTTCTGCCGGTCGGCCTTCTGCTaGTTTTCCTGCATGAGGTTCTGCCGGGCCAAGATG +
Preference number: 6 (lower is better)
Translates to: SAVSSFCRSAFC*FSCMRFCRAKM
Trigger: CATCTTGGCCCGGCAGAACCTCATGCAGGAAAACAAGCAGAAGGCCGACCGGCAGAAGGAGGAGACAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 72 bp CAAGGCTGCGGTCCTGCCCATGGCTGCGCGGCACAGTaGGATCTGTTCCACTGTGTTCTGTATCATTTGGCT +
Preference number: 6 (lower is better)
Translates to: QGCGPAHGCAAQ*DLFHCVLYHLA
Trigger: AGCCAAATGATACAGAACACAGTGGAACAGATCTCACTGTGCCGCGCAGCCATGGGCAGGACCGCAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 72 bp GGCATTGTAATGGCGCGGGGCCTTGGGACAGTCAGGTaGAATTCCTTGGGCACTGTGACTTTGGCCTTGGTC +
Preference number: 6 (lower is better)
Translates to: GIVMARGLGTVR*NSLGTVTLALV
Trigger: GACCAAGGCCAAAGTCACAGTGCCCAAGGAATTCAACCTGACTGTCCCAAGGCCCCGCGCCATTACAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 72 bp ATGGCGCGGGGCCTTGGGACAGTCAGGTTGAATTCCTaGGGCACTGTGACTTTGGCCTTGGTCTTCAAGACA +
Preference number: 6 (lower is better)
Translates to: MARGLGTVRLNS*GTVTLALVFKT
Trigger: TGTCTTGAAGACCAAGGCCAAAGTCACAGTGCCCAAGGAATTCAACCTGACTGTCCCAAGGCCCCGCGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 72 bp TTGGCTTTCAGCAGCAGCTCCTCAGCTGTCCGGCGGTaGCATGTCTTGATGATCTGCAGAAGCTTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LAFSSSSSAVRR*HVLMICRSFCS
Trigger: GGAGCAGAAGCTTCTGCAGATCATCAAGACATGCAACCGCCGGACAGCTGAGGAGCTGCTGCTGAAAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 72 bp TGCTGCCGGCCCTTCACGAGCTTCGTTTGGACTATCTaGACATTCTTCTGTGCCTCTGTGACCTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: CCRPFTSFVWTI*TFFCASVTCST
Trigger: GGTGGAGCAGGTCACAGAGGCACAGAAGAATGTCAAGATAGTCCAAACGAAGCTCGTGAAGGGCCGGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 72 bp GCTCACAGCGACGCTTCTGTTCCTCTTTGGCTTCCTTaGCACTACGCTGTAGCAACTCCCGGCTCTCCTCTA +
Preference number: 6 (lower is better)
Translates to: AHSDASVPLWLP*HYAVATPGSPL
Trigger: TAGAGGAGAGCCGGGAGTTGCTACAGCGTAGTGCAAAGGAAGCCAAAGAGGAACAGAAGCGTCGCTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 90 bp ACAGGCTCAGGCATTGTAATGGCGCGGGGCCTTGGGACAGTCAGGTaGAATTCCTTGGGCACTGTGACTTTGGCCTTGGTCTTCAAGACA +
Preference number: 6 (lower is better)
Translates to: TGSGIVMARGLGTVR*NSLGTVTLALVFKT
Trigger: TGTCTTGAAGACCAAGGCCAAAGTCACAGTGCCCAAGGAATTCAACCTGACTGTCCCAAGGCCCCGCGCCATTACAATGCCTGAGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 90 bp GCTCTTGGCTCGTTTGTCCTGGATGATTTGATCCCGCTTCTCCTCTaGCTCTCGTTTCTGGGTCTCTTTGAGCATGGCCAGCCGTTCTCG +
Preference number: 6 (lower is better)
Translates to: ALGSFVLDDLIPLLL*LSFLGLFEHGQPFS
Trigger: CGAGAACGGCTGGCCATGCTCAAAGAGACCCAGAAACGAGAGCAAGAGGAGAAGCGGGATCAAATCATCCAGGACAAACGAGCCAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 72 bp ACAAGTTTATCAACTCTCTGCAGCTCCTTCTCCACCTaGCGCTGGTATAAGGCCCCTTCTCGAAGGATGGTG +
Preference number: 6 (lower is better)
Translates to: TSLSTLCSSFST*RWYKAPSRRMV
Trigger: CACCATCCTTCGAGAAGGGGCCTTATACCAGCGGCAGGTGGAGAAGGAGCTGCAGAGAGTTGATAAACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 90 bp TATCACCTCCTGAACTATCTGCTGCCGGCCCTTCACGAGCTTCGTTaGGACTATCTTGACATTCTTCTGTGCCTCTGTGACCTGCTCCAC +
Preference number: 6 (lower is better)
Translates to: YHLLNYLLPALHELR*DYLDILLCLCDLLH
Trigger: GTGGAGCAGGTCACAGAGGCACAGAAGAATGTCAAGATAGTCCAAACGAAGCTCGTGAAGGGCCGGCAGCAGATAGTTCAGGAGGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 72 bp TGGACTATCTTGACATTCTTCTGTGCCTCTGTGACCTaGTCCACCAGCTCTTTCATGGCCTTCTCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: WTILTFFCASVT*STSSFMAFSSC
Trigger: GCAAGAGGAGAAGGCCATGAAAGAGCTGGTGGAGCAGGTCACAGAGGCACAGAAGAATGTCAAGATAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CCA 72 bp TATGGCCATCCCGTGCATAGAAGGCATCCACCACGATaGTCAGTAACTTGTGGTATTCAAGGCAGCCAGACA +
Preference number: 6 (lower is better)
Translates to: YGHPVHRRHPPR*SVTCGIQGSQT
Trigger: TGTCTGGCTGCCTTGAATACCACAAGTTACTGACCATCGTGGTGGATGCCTTCTATGCACGGGATGGCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 72 bp CTGAACTATCTGCTGCCGGCCCTTCACGAGCTTCGTTaGGACTATCTTGACATTCTTCTGTGCCTCTGTGAC +
Preference number: 6 (lower is better)
Translates to: LNYLLPALHELR*DYLDILLCLCD
Trigger: GTCACAGAGGCACAGAAGAATGTCAAGATAGTCCAAACGAAGCTCGTGAAGGGCCGGCAGCAGATAGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 72 bp CAGGAATTTGATCGGTTGGTACTCCCTCCAGTTGTTTaGTCAGCTTCTGGACCTCTGGCTGCCATCTCAACA +
Preference number: 6 (lower is better)
Translates to: QEFDRLVLPPVV*SASGPLAAIST
Trigger: TGTTGAGATGGCAGCCAGAGGTCCAGAAGCTGATCAAACAACTGGAGGGAGTACCAACCGATCAAATTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 72 bp ATCATTTGGCTCTTGGCTCGTTTGTCCTGGATGATTTaGTCCCGCTTCTCCTCTTGCTCTCGTTTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: IIWLLARLSWMI*SRFSSCSRFWV
Trigger: GACCCAGAAACGAGAGCAAGAGGAGAAGCGGGATCAAATCATCCAGGACAAACGAGCCAAGAGCCAAATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 90 bp TTCCTTGGGCACTGTGACTTTGGCCTTGGTCTTCAAGACAGGAATTaGATCGGTTGGTACTCCCTCCAGTTGTTTGATCAGCTTCTGGAC +
Preference number: 6 (lower is better)
Translates to: FLGHCDFGLGLQDRN*IGWYSLQLFDQLLD
Trigger: GTCCAGAAGCTGATCAAACAACTGGAGGGAGTACCAACCGATCAAATTCCTGTCTTGAAGACCAAGGCCAAAGTCACAGTGCCCAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 72 bp ACTGTGACTTTGGCCTTGGTCTTCAAGACAGGAATTTaGTCGGTTGGTACTCCCTCCAGTTGTTTGATCAGC +
Preference number: 6 (lower is better)
Translates to: TVTLALVFKTGI*SVGTPSSCLIS
Trigger: GCTGATCAAACAACTGGAGGGAGTACCAACCGATCAAATTCCTGTCTTGAAGACCAAGGCCAAAGTCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 72 bp TCTGTATCATTTGGCTCTTGGCTCGTTTGTCCTGGATaGTTTGATCCCGCTTCTCCTCTTGCTCTCGTTTCT +
Preference number: 6 (lower is better)
Translates to: SVSFGSWLVCPG*FDPASPLALVS
Trigger: AGAAACGAGAGCAAGAGGAGAAGCGGGATCAAATCATCCAGGACAAACGAGCCAAGAGCCAAATGATACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 72 bp TCCAAAACAAACCCAAACTTCTGTGGGCTCAGAGTCTaGTGTAAGGAGGTGAATACTGTCTCCACGAATTGC +
Preference number: 6 (lower is better)
Translates to: SKTNPNFCGLRV*CKEVNTVSTNC
Trigger: GCAATTCGTGGAGACAGTATTCACCTCCTTACAGCAGACTCTGAGCCCACAGAAGTTTGGGTTTGTTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CCA 72 bp TTTGGCCTTGGTCTTCAAGACAGGAATTTGATCGGTTaGTACTCCCTCCAGTTGTTTGATCAGCTTCTGGAC +
Preference number: 6 (lower is better)
Translates to: FGLGLQDRNLIG*YSLQLFDQLLD
Trigger: GTCCAGAAGCTGATCAAACAACTGGAGGGAGTACCAACCGATCAAATTCCTGTCTTGAAGACCAAGGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 72 bp CACTGTGACTTTGGCCTTGGTCTTCAAGACAGGAATTaGATCGGTTGGTACTCCCTCCAGTTGTTTGATCAG +
Preference number: 6 (lower is better)
Translates to: HCDFGLGLQDRN*IGWYSLQLFDQ
Trigger: CTGATCAAACAACTGGAGGGAGTACCAACCGATCAAATTCCTGTCTTGAAGACCAAGGCCAAAGTCACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS TCA 72 bp TGTTTCGTAGATGAGGCTCCACTCGTCTTTGATCCATaGGCTCAGGTTCAAGGGGTTAAAGAAGAATCTGAG +
Preference number: 6 (lower is better)
Translates to: CFVDEAPLVFDP*AQVQGVKEESE
Trigger: CTCAGATTCTTCTTTAACCCCTTGAACCTGAGCTCATGGATCAAAGACGAGTGGAGCCTCATCTACGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS GCA 72 bp GTCTGCTGTAAGGAGGTGAATACTGTCTCCACGAATTaGTCAGGATTGTCCTTTCCAGGCTTAAATTTGTCA +
Preference number: 6 (lower is better)
Translates to: VCCKEVNTVSTN*SGLSFPGLNLS
Trigger: TGACAAATTTAAGCCTGGAAAGGACAATCCTGAGCAATTCGTGGAGACAGTATTCACCTCCTTACAGCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2
CDS CAA 90 bp GTCTGCTGTAAGGAGGTGAATACTGTCTCCACGAATTGCTCAGGATaGTCCTTTCCAGGCTTAAATTTGTCAAGCTGCTTTATCACAATC +
Preference number: 6 (lower is better)
Translates to: VCCKEVNTVSTNCSG*SFPGLNLSSCFITI
Trigger: GATTGTGATAAAGCAGCTTGACAAATTTAAGCCTGGAAAGGACAATCCTGAGCAATTCGTGGAGACAGTATTCACCTCCTTACAGCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207754.2