Pregenerated sensors for CFAP97D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010841Ensembl transcript IDs: ENSMUST00000010985.8, ENSMUST00000176722.8
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGAGCCCAGTCCATCTCCGATaGCCTGCGGTCATAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DILRQRMQPFLRCLKILSPVHLR*PAVIVG Trigger: CCCAACTATGACCGCAGGTCATCGGAGATGGACTGG...GCTCAGGATCTTAAGACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR TCA 90 bp | AGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGAGCAGCCAAGAGATCTTACCAGTCCATCTCCGATaGCCTGCGGTCATAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RMQPFLRCLKILSSQEILPVHLR*PAVIVG Trigger: CCCAACTATGACCGCAGGTCATCGGAGATGGACTGG...TAAGATCTCTTGGCTGCTCAGGATCTTAAGACATCGCAGAAATGGCTGCATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR CCA 90 bp | AGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGAGCAGCCAAGAGATCTTAATGTGTGTGTGCCATTaGAGGTTTGGTATCGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RMQPFLRCLKILSSQEILMCVCH*RFGIDG Trigger: GCCGTCGATACCAAACCTCCAATGGCACACACACAT...TAAGATCTCTTGGCTGCTCAGGATCTTAAGACATCGCAGAAATGGCTGCATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010985.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGAGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGAGCAGCCAAGAGCTCCTTAGGATGCCCTaGTTTTCCATGGTGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQRMQPFLRCLKILSSQELLRMP*FSMVIL Trigger: AAGAATCACCATGGAAAACCAGGGCATCCTAAGGAG...CTCTTGGCTGCTCAGGATCTTAAGACATCGCAGAAATGGCTGCATTCTCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGACCTGCGGTCATAGTTaGGTTTGCGATCACTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: CDILRQRMQPFLRCLKILTCGHS*VCDHST Trigger: GGTTGAGTGATCGCAAACCCAACTATGACCGCAGGT...CAGGATCTTAAGACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR TCA 90 bp | AGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGAGCAGCCAAGAGATCTTACCTGGTTTTCCATGGTaGTTCTTACTAGCTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RMQPFLRCLKILSSQEILPGFPW*FLLALG Trigger: ACCGAGAGCTAGTAAGAATCACCATGGAAAACCAGG...TAAGATCTCTTGGCTGCTCAGGATCTTAAGACATCGCAGAAATGGCTGCATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR TCA 90 bp | GCCAAGCTTTATTGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTCCTGGTTTTCCATGGTaGTTCTTACTAGCTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKLYCDILRQRMQPFLRCPGFPW*FLLALG Trigger: ACCGAGAGCTAGTAAGAATCACCATGGAAAACCAGG...ACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACAATAAAGCTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR TCA 90 bp | TGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGGTTGTGCTTTGCCTGTaGTTAGAAACGATTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CDILRQRMQPFLRCLKILVVLCL*LETITG Trigger: CCCTGTAATCGTTTCTAATCACAGGCAAAGCACAAC...CAGGATCTTAAGACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010985.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTTTATTGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTTACCTGCGGTCATAGTTaGGTTTGCGATCACTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: KLYCDILRQRMQPFLRCLTCGHS*VCDHST Trigger: GGTTGAGTGATCGCAAACCCAACTATGACCGCAGGT...AAGACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACAATAAAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGTGCCAAGCTTTATTGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGTCTGATATACCGCCTTaGATTCTGCCAGTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: FCAKLYCDILRQRMQPFLSDIPP*ILPVHL Trigger: GAGATGGACTGGCAGAATTCAAGGCGGTATATCAGA...CAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACAATAAAGCTTGGCACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR TCA 90 bp | CTTTATTGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTTAAGTCTGATATACCGCCTTaGATTCTGCCAGTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LYCDILRQRMQPFLRCLKSDIPP*ILPVHL Trigger: GAGATGGACTGGCAGAATTCAAGGCGGTATATCAGA...CTTAAGACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACAATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGAGCAGCCAAATCTTGTTGTGTTTCTaGTATACCGCCTTGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRQRMQPFLRCLKILSSQILLCF*YTALNS Trigger: AGAATTCAAGGCGGTATATCAGAAACACAACAAGAT...TTGGCTGCTCAGGATCTTAAGACATCGCAGAAATGGCTGCATTCTCTGTCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR GCA 90 bp | AGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGAGCAGCCAAGAGATCTTAAATGTAATGTGTGTGTaGCATTGGAGGTTTGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: RMQPFLRCLKILSSQEILNVMCV*HWRFGI Trigger: GATACCAAACCTCCAATGGCACACACACATTACATT...TAAGATCTCTTGGCTGCTCAGGATCTTAAGACATCGCAGAAATGGCTGCATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010985.8 |
||
| CDS-3UTR CCA 90 bp | CTTTATTGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTTAAGCTCCTTAGGATGCCCTaGTTTTCCATGGTGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYCDILRQRMQPFLRCLKLLRMP*FSMVIL Trigger: AAGAATCACCATGGAAAACCAGGGCATCCTAAGGAG...CTTAAGACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTTTATTGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTTATCTTGTTGTGTTTCTaGTATACCGCCTTGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLYCDILRQRMQPFLRCLILLCF*YTALNS Trigger: AGAATTCAAGGCGGTATATCAGAAACACAACAAGAT...AAGACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACAATAAAGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS CCA 90 bp | GCCTTGAATTCTGCCAGTCCATCTCCGATGACCTGCGGTCATAGTTaGGTTTGCGATCACTCAACCTCCTTAGGATGCCCTGGTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALNSASPSPMTCGHS*VCDHSTSLGCPGFP Trigger: TGGAAAACCAGGGCATCCTAAGGAGGTTGAGTGATCGCAAACCCAACTATGACCGCAGGTCATCGGAGATGGACTGGCAGAATTCAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR CAA 90 bp | GCCAAGCTTTATTGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTTGTGCCATTGGAGGTTaGGTATCGACGGCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AKLYCDILRQRMQPFLRCCAIGG*VSTAGF Trigger: GAAGCCTGCCGTCGATACCAAACCTCCAATGGCACA...ACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACAATAAAGCTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010985.8 |
||
| CDS-3UTR CAA 90 bp | GACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGAGCAATGTGTGTGTGCCATaGGAGGTTTGGTATCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: DILRQRMQPFLRCLKILSNVCVP*EVWYRR Trigger: CCGTCGATACCAAACCTCCAATGGCACACACACATT...GCTCAGGATCTTAAGACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010985.8 |
||
| CDS TCA 90 bp | GTTTGCGATCACTCAACCTCCTTAGGATGCCCTGGTTTTCCATGGTaGTTCTTACTAGCTCTCGGTTCCTTGATTCTCTGTTTAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VCDHSTSLGCPGFPW*FLLALGSLILCLSF Trigger: AAAGCTTAAACAGAGAATCAAGGAACCGAGAGCTAGTAAGAATCACCATGGAAAACCAGGGCATCCTAAGGAGGTTGAGTGATCGCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS CCA 90 bp | CTCTGTTTAAGCTTTTTGAAAGATACTCATTCCAGCAGTCCACCTTaGCAGGGCCTCGATAGGCATTCGCAATTTTCTGACACAATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LCLSFLKDTHSSSPP*QGLDRHSQFSDTIV Trigger: GACAATTGTGTCAGAAAATTGCGAATGCCTATCGAGGCCCTGCCAAGGTGGACTGCTGGAATGAGTATCTTTCAAAAAGCTTAAACAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR CAA 90 bp | AGACAGAGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGAGCAGCCAAGAGTTTGTCGATTCTCTTTaGTTCACCCTGGATTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RQRMQPFLRCLKILSSQEFVDSL*FTLDFA Trigger: AGCAAAATCCAGGGTGAACAAAAGAGAATCGACAAA...CTCTTGGCTGCTCAGGATCTTAAGACATCGCAGAAATGGCTGCATTCTCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGAGCAGCCAACTAGCTCTCGGTTCCTaGATTCTCTGTTTAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LRQRMQPFLRCLKILSSQLALGS*ILCLSF Trigger: AAAGCTTAAACAGAGAATCAAGGAACCGAGAGCTAG...TTGGCTGCTCAGGATCTTAAGACATCGCAGAAATGGCTGCATTCTCTGTCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR CAA 90 bp | GACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTTAAGATCCTGAGCGGCAGGCTTCACTATTaGTACTCTATTTTTGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DILRQRMQPFLRCLKILSGRLHY*YSIFVQ Trigger: TTGCACAAAAATAGAGTACAAATAGTGAAGCCTGCC...GCTCAGGATCTTAAGACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010985.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGTGCCAAGCTTTATTGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGCCTAAAGGTTGTGCTTaGCCTGTGATTAGAAACGAT | + |
|
Preference number: 5 (lower is better) Translates to: FCAKLYCDILRQRMQPFLPKGCA*PVIRND Trigger: ATCGTTTCTAATCACAGGCAAAGCACAACCTTTAGG...CAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACAATAAAGCTTGGCACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010985.8 |
||
| CDS-3UTR CAA 90 bp | GCCAAGCTTTATTGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTCTGTTTAAGCTTTTaGAAAGATACTCATTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AKLYCDILRQRMQPFLRCLCLSF*KDTHSS Trigger: GCTGGAATGAGTATCTTTCAAAAAGCTTAAACAGAG...ACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACAATAAAGCTTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGTGCCAAGCTTTATTGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGCTAGCTCTCGGTTCCTaGATTCTCTGTTTAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FCAKLYCDILRQRMQPFLLALGS*ILCLSF Trigger: AAAGCTTAAACAGAGAATCAAGGAACCGAGAGCTAG...CAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACAATAAAGCTTGGCACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTTTATTGTGACATCCTAAGACAGAGAATGCAGCCATTTCTGCGATGTCTTCTCTGTTTAAGCTTTTaGAAAGATACTCATTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KLYCDILRQRMQPFLRCLLCLSF*KDTHSS Trigger: GCTGGAATGAGTATCTTTCAAAAAGCTTAAACAGAG...AAGACATCGCAGAAATGGCTGCATTCTCTGTCTTAGGATGTCACAATAAAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS GCA 72 bp | ACCGCCTTGAATTCTGCCAGTCCATCTCCGATGACCTaGGGTCATAGTTGGGTTTGCGATCACTCAACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TALNSASPSPMT*GHSWVCDHSTS Trigger: GGAGGTTGAGTGATCGCAAACCCAACTATGACCGCAGGTCATCGGAGATGGACTGGCAGAATTCAAGGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS CCA 72 bp | TCTGCCAGTCCATCTCCGATGACCTGCGGTCATAGTTaGGTTTGCGATCACTCAACCTCCTTAGGATGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SASPSPMTCGHS*VCDHSTSLGCP Trigger: AGGGCATCCTAAGGAGGTTGAGTGATCGCAAACCCAACTATGACCGCAGGTCATCGGAGATGGACTGGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS GCA 72 bp | AGTCCATCTCCGATGACCTGCGGTCATAGTTGGGTTTaGGATCACTCAACCTCCTTAGGATGCCCTGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPSPMTCGHSWV*DHSTSLGCPGF Trigger: AAAACCAGGGCATCCTAAGGAGGTTGAGTGATCGCAAACCCAACTATGACCGCAGGTCATCGGAGATGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS CCA 72 bp | AGCTTTTTGAAAGATACTCATTCCAGCAGTCCACCTTaGCAGGGCCTCGATAGGCATTCGCAATTTTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SFLKDTHSSSPP*QGLDRHSQFSD Trigger: GTCAGAAAATTGCGAATGCCTATCGAGGCCCTGCCAAGGTGGACTGCTGGAATGAGTATCTTTCAAAAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||
| CDS TCA 72 bp | AGTCTTCTTGGAAGAGAAGATATCTTGTTGTGTTTCTaGTATACCGCCTTGAATTCTGCCAGTCCATCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLLGREDILLCF*YTALNSASPSP Trigger: CGGAGATGGACTGGCAGAATTCAAGGCGGTATATCAGAAACACAACAAGATATCTTCTCTTCCAAGAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010985.8 ENSMUST00000176722.8 |
||