Pregenerated sensors for CFAP77 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079502Ensembl transcript IDs: ENSMUST00000157048.4, ENSMUST00000189027.7, ENSMUST00000189711.7
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCTCAGAGGCTCCTCCTGTGGGGAGGGCTAGGGGTGGGTGTAGTTaGCCATCCGCAGGGTGCCCTGGCGCACAGCATACTCTTCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: ISEAPPVGRARGGCS*PSAGCPGAQHTLPC Trigger: ACAAGGAAGAGTATGCTGTGCGCCAGGGCACCCTGCGGATGGGCAACTACACCCACCCCTAGCCCTCCCCACAGGAGGAGCCTCTGAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR CCA 90 bp | TTGCCCATCCGCAGGGTGCCCTGGCGCACAGCATACTCTTCCTTGTaGGCTTTGAGGGCTCTCTGGCGATCAGCCTCAGTAGGGAACGTA | + |
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Preference number: 1 (lower is better) Translates to: LPIRRVPWRTAYSSL*ALRALWRSASVGNV Trigger: TACGTTCCCTACTGAGGCTGATCGCCAGAGAGCCCTCAAAGCCCACAAGGAAGAGTATGCTGTGCGCCAGGGCACCCTGCGGATGGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR TCA 90 bp | TGCCAGAGAGCATCCAGCTTCACCGGAGGCTTGTACTTCCTCAGCTaGCTGCTCCTCGTCTCGTACAGCTTCCCCAGGATCACCTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: CQRASSFTGGLYFLS*LLLVSYSFPRITFC Trigger: ACAGAAGGTGATCCTGGGGAAGCTGTACGAGACGAGGAGCAGTCAGCTGAGGAAGTACAAGCCTCCGGTGAAGCTGGATGCTCTCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR TCA 90 bp | GCCTCAGTAGGGAACGTAGCAAGATGGGAAGCCACCTTCTTGAAGTaGGGCATGTGCCAGAGAGCATCCAGCTTCACCGGAGGCTTGTAC | + |
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Preference number: 1 (lower is better) Translates to: ASVGNVARWEATFLK*GMCQRASSFTGGLY Trigger: GTACAAGCCTCCGGTGAAGCTGGATGCTCTCTGGCACATGCCTCACTTCAAGAAGGTGGCTTCCCATCTTGCTACGTTCCCTACTGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR GCA 90 bp | AGAGAGCATCCAGCTTCACCGGAGGCTTGTACTTCCTCAGCTGACTaGTCCTCGTCTCGTACAGCTTCCCCAGGATCACCTTCTGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: REHPASPEACTSSAD*SSSRTASPGSPSVS Trigger: AGAAACAGAAGGTGATCCTGGGGAAGCTGTACGAGACGAGGAGCAGTCAGCTGAGGAAGTACAAGCCTCCGGTGAAGCTGGATGCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR TCA 90 bp | GTCATTCCCAGAAGGGCAATTAAAACTCATGTTTGGAATAAGAAATaGGTGCTTTCAAAGCCTGCTGGTGCTACACTTTCTGCTGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: VIPRRAIKTHVWNKK*VLSKPAGATLSAGK Trigger: TTTTCCAGCAGAAAGTGTAGCACCAGCAGGCTTTGAAAGCACTCATTTCTTATTCCAAACATGAGTTTTAATTGCCCTTCTGGGAATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| 3UTR GCA 90 bp | TTCCCAGAAGGGCAATTAAAACTCATGTTTGGAATAAGAAATGAGTaGTTTCAAAGCCTGCTGGTGCTACACTTTCTGCTGGAAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: FPEGQLKLMFGIRNE*FQSLLVLHFLLEKK Trigger: TTTCTTTTCCAGCAGAAAGTGTAGCACCAGCAGGCTTTGAAAGCACTCATTTCTTATTCCAAACATGAGTTTTAATTGCCCTTCTGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| 3UTR CAA 90 bp | ATCCGCAGGGTGCCCTGGCGCACAGCATACTCTTCCTTGTGGGCTTaGAGGGCTCTCTGGCGATCAGCCTCAGTAGGGAACGTAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: IRRVPWRTAYSSLWA*RALWRSASVGNVAR Trigger: TCTTGCTACGTTCCCTACTGAGGCTGATCGCCAGAGAGCCCTCAAAGCCCACAAGGAAGAGTATGCTGTGCGCCAGGGCACCCTGCGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR CAA 90 bp | TCAAAGAAGGGTGTTGATGGCCGTGAACGGATCCCAAAGGTCATGTaGGGAGGGATAGGAGGTGGCTCCTTCTGTCGCCGGTCTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SKKGVDGRERIPKVM*GGIGGGSFCRRSSW Trigger: CCAGGAAGACCGGCGACAGAAGGAGCCACCTCCTATCCCTCCCAACATGACCTTTGGGATCCGTTCACGGCCATCAACACCCTTCTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTAGTGCATCTCAGAGGCTCCTCCTGTGGGGAGGGCTAGGGGTGGGTGTATTGTACTTCCTCAGCTaGCTGCTCCTCGTCTCGTAC | + |
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Preference number: 2 (lower is better) Translates to: FPSASQRLLLWGGLGVGVLYFLS*LLLVSY Trigger: GTACGAGACGAGGAGCAGTCAGCTGAGGAAGTACAA...TACACCCACCCCTAGCCCTCCCCACAGGAGGAGCCTCTGAGATGCACTAGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR CCA 90 bp | AGTAATGAACCATCCCAGAGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCTTCCGGGTCAGCTCGTaGGGGCAGGTAGGTTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SNEPSQRENPAVSRPQSFFRVSS*GQVGCC Trigger: GCAGCAACCTACCTGCCCCCACGAGCTGACCCGGAA...GAATGACTGGGGTCTCGACACGGCAGGATTCTCTCTCTGGGATGGTTCATTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR GCA 90 bp | TTTCCTAGTGCATCTCAGAGGCTCCTCCTGTGGGGAGGGCTAGGGGTGGGTGTATCCTGTACCCACAGCTaGTGGTACCGATGTTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: FPSASQRLLLWGGLGVGVSCTHS*WYRCCN Trigger: GTTACAACATCGGTACCAGCAGCTGTGGGTACAGGA...TACACCCACCCCTAGCCCTCCCCACAGGAGGAGCCTCTGAGATGCACTAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR CAA 90 bp | GTTCATGGCAATATAGTTCCGGGTCAGCTCGTGGGGGCAGGTAGGTaGCTGCTTAAACACATTCCAGTGCCCAATGGCTTCAGGAACCCC | + |
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Preference number: 2 (lower is better) Translates to: VHGNIVPGQLVGAGR*LLKHIPVPNGFRNP Trigger: GGGGTTCCTGAAGCCATTGGGCACTGGAATGTGTTTAAGCAGCAACCTACCTGCCCCCACGAGCTGACCCGGAACTATATTGCCATGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR TCA 90 bp | GTACCCACAGCTGCTGGTACCGATGTTGTAACAGGTCAAAGAAGGGTGTTGATGTCACCAGGCCAGCTTTaGCAGCCCCTCGGTTCATGG | + |
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Preference number: 2 (lower is better) Translates to: VPTAAGTDVVTGQRRVLMSPGQL*QPLGSW Trigger: CCATGAACCGAGGGGCTGTCAAAGCTGGCCTGGTGA...CATCAACACCCTTCTTTGACCTGTTACAACATCGGTACCAGCAGCTGTGGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR GCA 90 bp | AGTAATGAACCATCCCAGAGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCGGGCTTGCCAAGCTCTaGCTGAGGCTCTCCTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: SNEPSQRENPAVSRPQSFGLAKL*LRLSFV Trigger: AACAAAGGAGAGCCTCAGGCAGAGCTTGGCAAGCCC...GAATGACTGGGGTCTCGACACGGCAGGATTCTCTCTCTGGGATGGTTCATTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR CCA 90 bp | AGGATGGTGGTTTCTAGGCAGAGGAAAACTGGGGGAAGACAAGAGTTGTGTTGTCTATCTTTCTGGAGTTaGCGGGGGTGGGGGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: RMVVSRQRKTGGRQELCCLSFWS*RGWGWV Trigger: CACCCACCCCCACCCCCGCCAACTCCAGAAAGATAG...ACAACACAACTCTTGTCTTCCCCCAGTTTTCCTCTGCCTAGAAACCACCATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| 3UTR-3UTR TCA 90 bp | AAAATAAATTCCTTTGTAATTTGTGGAGAGAAGCCAAAGACACCGGAGAAAGGTACAGGGCCACAGCACTaGGGGCGGGGCCTGGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: KINSFVICGEKPKTPEKGTGPQH*GRGLAL Trigger: CAGGGCCAGGCCCCGCCCTCAGTGCTGTGGCCCTGT...ACCTTTCTCCGGTGTCTTTGGCTTCTCTCCACAAATTACAAAGGAATTTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| 3UTR-3UTR GCA 90 bp | GTACCCACAGCTGCTGGTACCGATGTTGTAACAGGTCAAAGAAGGGTGTTGATGTTCTTTCCCTGGGCTTaGCAAGCTCTGCCTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: VPTAAGTDVVTGQRRVLMFFPWA*QALPEA Trigger: AGCCTCAGGCAGAGCTTGGCAAGCCCAGGGAAAGAA...CATCAACACCCTTCTTTGACCTGTTACAACATCGGTACCAGCAGCTGTGGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR CCA 90 bp | AATGAACCATCCCAGAGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCATGTCGCCGGTCTTCCTaGTCATTGATTCGGATGTCA | + |
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Preference number: 2 (lower is better) Translates to: NEPSQRENPAVSRPQSFPCRRSS*SLIRMS Trigger: TGACATCCGAATCAATGACCAGGAAGACCGGCGACA...TGGGAATGACTGGGGTCTCGACACGGCAGGATTCTCTCTCTGGGATGGTTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR CCA 90 bp | AGGATGGTGGTTTCTAGGCAGAGGAAAACTGGGGGAAGACAAGAGTTGTGTTGTGTAGGACTATCTTTCTaGAGTTGGCGGGGGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: RMVVSRQRKTGGRQELCCVGLSF*SWRGWG Trigger: CCCCCACCCCCGCCAACTCCAGAAAGATAGTCCTAC...ACAACACAACTCTTGTCTTCCCCCAGTTTTCCTCTGCCTAGAAACCACCATCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| 3UTR-3UTR CCA 90 bp | AATGAACCATCCCAGAGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGCTTTCAAAGCCTGCTaGTGCTACACTTTCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NEPSQRENPAVSRPQSFPAFKAC*CYTFCW Trigger: CCAGCAGAAAGTGTAGCACCAGCAGGCTTTGAAAGC...TGGGAATGACTGGGGTCTCGACACGGCAGGATTCTCTCTCTGGGATGGTTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| 3UTR-3UTR GCA 90 bp | GAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAAACTCATTGGGGGCAGGTAGGTTaGTGCTTAAACACATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: ESCRVETPVIPRRAIKTHWGQVG*CLNTFQ Trigger: CTGGAATGTGTTTAAGCAGCAACCTACCTGCCCCCA...ATGAGTTTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGCAGGATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR GCA 90 bp | AATGAACCATCCCAGAGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCATTCAAAGCCTGCTGGTaGTACACTTTCTGCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: NEPSQRENPAVSRPQSFPFKACW*YTFCWK Trigger: TTTCCAGCAGAAAGTGTAGCACCAGCAGGCTTTGAA...TGGGAATGACTGGGGTCTCGACACGGCAGGATTCTCTCTCTGGGATGGTTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| 3UTR-3UTR TCA 90 bp | GAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAAACTCATGGTCTTCCTGGTCATTaGTTCGGATGTCATTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: ESCRVETPVIPRRAIKTHGLPGH*FGCHSV Trigger: AACTGAATGACATCCGAATCAATGACCAGGAAGACC...ATGAGTTTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGCAGGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR TCA 90 bp | AGGATGGTGGTTTCTAGGCAGAGGAAAACTGGGGGAAGACAAGAGTTGTGTTGTATTTTGATGGCTTGCTaGGTGGCCTTCTGTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RMVVSRQRKTGGRQELCCILMAC*VAFCSC Trigger: ACAGGAACAGAAGGCCACTCAGCAAGCCATCAAAAT...ACAACACAACTCTTGTCTTCCCCCAGTTTTCCTCTGCCTAGAAACCACCATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR TCA 90 bp | AAAATAAATTCCTTTGTAATTTGTGGAGAGAAGCCAAAGACACCGGAGAAAGGTAGGAAAAGAGAATTTTaGGGAGGATGGTGGTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: KINSFVICGEKPKTPEKGRKREF*GGWWFL Trigger: TAGAAACCACCATCCTCCTCAAAATTCTCTTTTCCT...ACCTTTCTCCGGTGTCTTTGGCTTCTCTCCACAAATTACAAAGGAATTTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| 3UTR GCA 72 bp | GCTCCTCCTGTGGGGAGGGCTAGGGGTGGGTGTAGTTaGCCATCCGCAGGGTGCCCTGGCGCACAGCATACT | + |
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Preference number: 3 (lower is better) Translates to: APPVGRARGGCS*PSAGCPGAQHT Trigger: AGTATGCTGTGCGCCAGGGCACCCTGCGGATGGGCAACTACACCCACCCCTAGCCCTCCCCACAGGAGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR GCA 72 bp | AGGGCTAGGGGTGGGTGTAGTTGCCCATCCGCAGGGTaGCCTGGCGCACAGCATACTCTTCCTTGTGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: RARGGCSCPSAG*PGAQHTLPCGL Trigger: AAGCCCACAAGGAAGAGTATGCTGTGCGCCAGGGCACCCTGCGGATGGGCAACTACACCCACCCCTAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR GCA 72 bp | CCCCATCCAAGTGGCCTTAAGAAGTCCATGCTGGTCTaGCTGATTGACAGGGCCACAGCACTGAGGGCGGGG | + |
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Preference number: 3 (lower is better) Translates to: PHPSGLKKSMLV*LIDRATALRAG Trigger: CCCCGCCCTCAGTGCTGTGGCCCTGTCAATCAGGCAGACCAGCATGGACTTCTTAAGGCCACTTGGATGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| 3UTR CCA 72 bp | CGCAGGGTGCCCTGGCGCACAGCATACTCTTCCTTGTaGGCTTTGAGGGCTCTCTGGCGATCAGCCTCAGTA | + |
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Preference number: 3 (lower is better) Translates to: RRVPWRTAYSSL*ALRALWRSASV Trigger: TACTGAGGCTGATCGCCAGAGAGCCCTCAAAGCCCACAAGGAAGAGTATGCTGTGCGCCAGGGCACCCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR TCA 72 bp | GCATCCAGCTTCACCGGAGGCTTGTACTTCCTCAGCTaGCTGCTCCTCGTCTCGTACAGCTTCCCCAGGATC | + |
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Preference number: 3 (lower is better) Translates to: ASSFTGGLYFLS*LLLVSYSFPRI Trigger: GATCCTGGGGAAGCTGTACGAGACGAGGAGCAGTCAGCTGAGGAAGTACAAGCCTCCGGTGAAGCTGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR GCA 72 bp | CCAGCTTCACCGGAGGCTTGTACTTCCTCAGCTGACTaGTCCTCGTCTCGTACAGCTTCCCCAGGATCACCT | + |
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Preference number: 3 (lower is better) Translates to: PASPEACTSSAD*SSSRTASPGSP Trigger: AGGTGATCCTGGGGAAGCTGTACGAGACGAGGAGCAGTCAGCTGAGGAAGTACAAGCCTCCGGTGAAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR TCA 72 bp | GGTAGCCAGCCATCCCAGCTCTGTGCTGAGATGACCTaGGATTTCCCAAGGTTCTGCCTCTTCCCAGCATTC | + |
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Preference number: 3 (lower is better) Translates to: GSQPSQLCAEMT*DFPRFCLFPAF Trigger: GAATGCTGGGAAGAGGCAGAACCTTGGGAAATCTCAGGTCATCTCAGCACAGAGCTGGGATGGCTGGCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
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| 3UTR TCA 72 bp | GGGAACGTAGCAAGATGGGAAGCCACCTTCTTGAAGTaGGGCATGTGCCAGAGAGCATCCAGCTTCACCGGA | + |
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Preference number: 3 (lower is better) Translates to: GNVARWEATFLK*GMCQRASSFTG Trigger: TCCGGTGAAGCTGGATGCTCTCTGGCACATGCCTCACTTCAAGAAGGTGGCTTCCCATCTTGCTACGTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR GCA 72 bp | GTACTTGAGATGTCCCATAGCTGGGACCTAGCCACCTaGCCAGCACAAGGCCTTCTCCTTTGGAAGGATGAG | + |
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Preference number: 3 (lower is better) Translates to: VLEMSHSWDLAT*PAQGLLLWKDE Trigger: CTCATCCTTCCAAAGGAGAAGGCCTTGTGCTGGGCAGGTGGCTAGGTCCCAGCTATGGGACATCTCAAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| 3UTR CCA 72 bp | ACAGCATACTCTTCCTTGTGGGCTTTGAGGGCTCTCTaGCGATCAGCCTCAGTAGGGAACGTAGCAAGATGG | + |
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Preference number: 3 (lower is better) Translates to: TAYSSLWALRAL*RSASVGNVARW Trigger: CCATCTTGCTACGTTCCCTACTGAGGCTGATCGCCAGAGAGCCCTCAAAGCCCACAAGGAAGAGTATGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR TCA 72 bp | GAGGTGGCTCCTTCTGTCGCCGGTCTTCCTGGTCATTaGTTCGGATGTCATTCAGTTCGCGATAGAGCATGT | + |
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Preference number: 3 (lower is better) Translates to: EVAPSVAGLPGH*FGCHSVRDRAC Trigger: ACATGCTCTATCGCGAACTGAATGACATCCGAATCAATGACCAGGAAGACCGGCGACAGAAGGAGCCACCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAAGTGGGGGCAGGTAGGTaGCTGCTTAAACACATTCCA | + |
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Preference number: 3 (lower is better) Translates to: ERESCRVETPVIPRRAIKVGAGR*LLKHIP Trigger: TGGAATGTGTTTAAGCAGCAACCTACCTGCCCCCAC...TTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGCAGGATTCTCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR-3UTR CAA 90 bp | AATGAACCATCCCAGAGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCACGGTCTTCCTGGTCATaGATTCGGATGTCATTCAGT | + |
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Preference number: 3 (lower is better) Translates to: NEPSQRENPAVSRPQSFPRSSWS*IRMSFS Trigger: ACTGAATGACATCCGAATCAATGACCAGGAAGACCG...TGGGAATGACTGGGGTCTCGACACGGCAGGATTCTCTCTCTGGGATGGTTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR TCA 72 bp | GAGGCAGAGTGTATTTCCTGGAAGAGGAGGAGGGGGTaGACATGGAAAGAGAAAAGGAAGAAGAGAGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: EAECISWKRRRG*TWKEKRKKRER Trigger: CCTTTCTCTCTTCTTCCTTTTCTCTTTCCATGTTCACCCCCTCCTCCTCTTCCAGGAAATACACTCTGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| CDS-3UTR CCA 90 bp | AGCATCCAGCTTCACCGGAGGCTTGTACTTCCTCAGCTGACTGCTCCTCGTCTCGGCGGCGGGCAGATCTaGCTGACCGTGCGATGCACG | + |
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Preference number: 4 (lower is better) Translates to: SIQLHRRLVLPQLTAPRLGGGQI*LTVRCT Trigger: CGTGCATCGCACGGTCAGCCAGATCTGCCCGCCGCC...GAGACGAGGAGCAGTCAGCTGAGGAAGTACAAGCCTCCGGTGAAGCTGGATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR CAA 72 bp | ATCCGCAGGGTGCCCTGGCGCACAGCATACTCTTCCTaGTGGGCTTTGAGGGCTCTCTGGCGATCAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: IRRVPWRTAYSS*WALRALWRSAS Trigger: TGAGGCTGATCGCCAGAGAGCCCTCAAAGCCCACAAGGAAGAGTATGCTGTGCGCCAGGGCACCCTGCGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR CAA 72 bp | GGTGTTGATGGCCGTGAACGGATCCCAAAGGTCATGTaGGGAGGGATAGGAGGTGGCTCCTTCTGTCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GVDGRERIPKVM*GGIGGGSFCRR Trigger: CCGGCGACAGAAGGAGCCACCTCCTATCCCTCCCAACATGACCTTTGGGATCCGTTCACGGCCATCAACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| 3UTR CAA 72 bp | GTGCCCTGGCGCACAGCATACTCTTCCTTGTGGGCTTaGAGGGCTCTCTGGCGATCAGCCTCAGTAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VPWRTAYSSLWA*RALWRSASVGN Trigger: GTTCCCTACTGAGGCTGATCGCCAGAGAGCCCTCAAAGCCCACAAGGAAGAGTATGCTGTGCGCCAGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| CDS-3UTR TCA 90 bp | AGTTGCCCATCCGCAGGGTGCCCTGGCGCACAGCATACTCTTCCTTGTGGGCTTACGATGAGCGGGTTCTaGAACATGGAGTCACGCACG | + |
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Preference number: 4 (lower is better) Translates to: SCPSAGCPGAQHTLPCGLTMSGF*NMESRT Trigger: CGTGCGTGACTCCATGTTTCAGAACCCGCTCATCGT...AAGCCCACAAGGAAGAGTATGCTGTGCGCCAGGGCACCCTGCGGATGGGCAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| CDS-3UTR CCA 90 bp | GAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAAACTCGGCGGCGGGCAGATCTaGCTGACCGTGCGATGCACG | + |
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Preference number: 4 (lower is better) Translates to: ENPAVSRPQSFPEGQLKLGGGQI*LTVRCT Trigger: CGTGCATCGCACGGTCAGCCAGATCTGCCCGCCGCC...GAGTTTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGCAGGATTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| CDS-3UTR TCA 90 bp | AGGGCTGTGTTACAATGTAGGACTATCTTTCTGGAGTTGGCGGGGGTGGGGGTGTCACCAGGCCAGCTTTaGCAGCCCCTCGGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RAVLQCRTIFLELAGVGVSPGQL*QPLGSW Trigger: CCATGAACCGAGGGGCTGTCAAAGCTGGCCTGGTGA...CACCCCCACCCCCGCCAACTCCAGAAAGATAGTCCTACATTGTAACACAGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| CDS-3UTR GCA 90 bp | AATGAACCATCCCAGAGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCATGCCCATCCGCAGGGTaGCCTGGCGCACAGCATACT | + |
|
Preference number: 4 (lower is better) Translates to: NEPSQRENPAVSRPQSFPCPSAG*PGAQHT Trigger: AGTATGCTGTGCGCCAGGGCACCCTGCGGATGGGCA...TGGGAATGACTGGGGTCTCGACACGGCAGGATTCTCTCTCTGGGATGGTTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| CDS-3UTR CCA 90 bp | CATTCCAGTGCCCAATGGCTTCAGGAACCCCTCCATCCAGCCCTCGGATGTAGAGCGGGTTCTGAAACATaGAGTCACGCACGACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSSAQWLQEPLHPALGCRAGSET*SHARPP Trigger: TGGGGGTCGTGCGTGACTCCATGTTTCAGAACCCGC...TCTACATCCGAGGGCTGGATGGAGGGGTTCCTGAAGCCATTGGGCACTGGAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
||
| CDS-3UTR GCA 90 bp | GTGGGCTTTGAGGGCTCTCTGGCGATCAGCCTCAGTAGGGAACGTAGCAAGATGGTGCGATGCACGGGCTaGTTCTTCTTTTTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGFEGSLAISLSRERSKMVRCTG*FFFFHA Trigger: GGCATGGAAAAAGAAGAAGCAGCCCGTGCATCGCAC...CATCTTGCTACGTTCCCTACTGAGGCTGATCGCCAGAGAGCCCTCAAAGCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAAATTCCGGGTCAGCTCGTaGGGGCAGGTAGGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RENPAVSRPQSFPEGQLKFRVSS*GQVGCC Trigger: GCAGCAACCTACCTGCCCCCACGAGCTGACCCGGAA...TTTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGCAGGATTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| CDS-3UTR GCA 90 bp | CTGACTGCTCCTCGTCTCGTACAGCTTCCCCAGGATCACCTTCTGTTTCTTCTCGCCTTTCGTTCTCCATaGCCGTACGGATGTCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTAPRLVQLPQDHLLFLLAFRSP*PYGCRP Trigger: TGGTCGACATCCGTACGGGCATGGAGAACGAAAGGC...GAGAAGAAACAGAAGGTGATCCTGGGGAAGCTGTACGAGACGAGGAGCAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
||
| CDS-3UTR CCA 90 bp | CCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCGGCGGCGGGCAGATCTaGCTGACCGTGCGATGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PAFSMFPVYKTGQHQQLVGGGQI*LTVRCT Trigger: CGTGCATCGCACGGTCAGCCAGATCTGCCCGCCGCC...GACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAAACGATGAGCGGGTTCTaGAACATGGAGTCACGCACG | + |
|
Preference number: 4 (lower is better) Translates to: ERESCRVETPVIPRRAIKTMSGF*NMESRT Trigger: CGTGCGTGACTCCATGTTTCAGAACCCGCTCATCGT...TTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGCAGGATTCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAAGCCACCTTCTTGAAGTaGGGCATGTGCCAGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERESCRVETPVIPRRAIKATFLK*GMCQRA Trigger: TGCTCTCTGGCACATGCCTCACTTCAAGAAGGTGGC...TTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGCAGGATTCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| 3UTR CAA 72 bp | AATATAGTTCCGGGTCAGCTCGTGGGGGCAGGTAGGTaGCTGCTTAAACACATTCCAGTGCCCAATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NIVPGQLVGAGR*LLKHIPVPNGF Trigger: GAAGCCATTGGGCACTGGAATGTGTTTAAGCAGCAACCTACCTGCCCCCACGAGCTGACCCGGAACTATATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAAAGGGAAGCCACCTTCTTaGAGTGAGGCATGTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RENPAVSRPQSFPEGQLKGKPPS*SEACAR Trigger: TCTGGCACATGCCTCACTTCAAGAAGGTGGCTTCCC...TTTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGCAGGATTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| CDS-3UTR GCA 90 bp | AATGAACCATCCCAGAGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCATGGGGGCAGGTAGGTTaGTGCTTAAACACATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NEPSQRENPAVSRPQSFPWGQVG*CLNTFQ Trigger: CTGGAATGTGTTTAAGCAGCAACCTACCTGCCCCCA...TGGGAATGACTGGGGTCTCGACACGGCAGGATTCTCTCTCTGGGATGGTTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| CDS-3UTR GCA 90 bp | GAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAAACTCACTTCCTCAGCTGACTaGTCCTCGTCTCGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENPAVSRPQSFPEGQLKLTSSAD*SSSRTA Trigger: AGCTGTACGAGACGAGGAGCAGTCAGCTGAGGAAGT...GAGTTTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGCAGGATTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| CDS-3UTR CCA 90 bp | CCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCTTCCGGGTCAGCTCGTaGGGGCAGGTAGGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAFSMFPVYKTGQHQQLVFRVSS*GQVGCC Trigger: GCAGCAACCTACCTGCCCCCACGAGCTGACCCGGAA...GACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTCACCAGGCCAGCTTTaGCAGCCCCTCGGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSQHSPCFLSIKQVNISSSPGQL*QPLGSW Trigger: CCATGAACCGAGGGGCTGTCAAAGCTGGCCTGGTGA...GCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR TCA 90 bp | AGGGCTGTGTTACAATGTAGGACTATCTTTCTGGAGTTGGCGGGGGTGGGGGTGGGTCTTCCTGGTCATTaGTTCGGATGTCATTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RAVLQCRTIFLELAGVGVGLPGH*FGCHSV Trigger: AACTGAATGACATCCGAATCAATGACCAGGAAGACC...CACCCCCACCCCCGCCAACTCCAGAAAGATAGTCCTACATTGTAACACAGCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| CDS-3UTR TCA 90 bp | GAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAAACTCATTTGTACTTCCTCAGCTaGCTGCTCCTCGTCTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ESCRVETPVIPRRAIKTHLYFLS*LLLVSY Trigger: GTACGAGACGAGGAGCAGTCAGCTGAGGAAGTACAA...ATGAGTTTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGCAGGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAATGTCGCCGGTCTTCCTaGTCATTGATTCGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERESCRVETPVIPRRAIKCRRSS*SLIRMS Trigger: TGACATCCGAATCAATGACCAGGAAGACCGGCGACA...TTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGCAGGATTCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| CDS-3UTR CCA 90 bp | GAGAATCCTGCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAAACTCTGTACCCACAGCTGCTaGTACCGATGTTGTAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENPAVSRPQSFPEGQLKLCTHSC*YRCCNR Trigger: CCTGTTACAACATCGGTACCAGCAGCTGTGGGTACA...GAGTTTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGCAGGATTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| 3UTR CAA 72 bp | GCTGGTACCGATGTTGTAACAGGTCAAAGAAGGGTGTaGATGGCCGTGAACGGATCCCAAAGGTCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGTDVVTGQRRV*MAVNGSQRSCW Trigger: CCAACATGACCTTTGGGATCCGTTCACGGCCATCAACACCCTTCTTTGACCTGTTACAACATCGGTACCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
||
| CDS-3UTR GCA 90 bp | AGGATGGTGGTTTCTAGGCAGAGGAAAACTGGGGGAAGACAAGAGTTGTGTTGTGTGCGATGCACGGGCTaGTTCTTCTTTTTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RMVVSRQRKTGGRQELCCVRCTG*FFFFHA Trigger: GGCATGGAAAAAGAAGAAGCAGCCCGTGCATCGCAC...ACAACACAACTCTTGTCTTCCCCCAGTTTTCCTCTGCCTAGAAACCACCATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000189027.7 ENSMUST00000189711.7 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGACGATGAGCGGGTTCTaGAACATGGAGTCACGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LFPAFSMFPVYKTGQHQQTMSGF*NMESRT Trigger: CGTGCGTGACTCCATGTTTCAGAACCCGCTCATCGT...CTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGGGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGCGGGTTCTGAAACATaGAGTCACGCACGACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPAFSMFPVYKTGQHQQLAGSET*SHARPP Trigger: TGGGGGTCGTGCGTGACTCCATGTTTCAGAACCCGC...AAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR TCA 90 bp | CCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCTTGTACTTCCTCAGCTaGCTGCTCCTCGTCTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PAFSMFPVYKTGQHQQLVLYFLS*LLLVSY Trigger: GTACGAGACGAGGAGCAGTCAGCTGAGGAAGTACAA...GACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCCCCAGCATACCTTCTTaGAGTGAGGCATGTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSQHSPCFLSIKQVNISSPSIPS*SEACAR Trigger: TCTGGCACATGCCTCACTTCAAGAAGGTATGCTGGG...GCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR GCA 90 bp | CATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCCATGGCCTTTCGTTCTCCATaGCCGTACGGATGTCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: HSPCFLSIKQVNISSLSMAFRSP*PYGCRP Trigger: TGGTCGACATCCGTACGGGCATGGAGAACGAAAGGC...CATGGACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR GCA 90 bp | CCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCACTTCCTCAGCTGACTaGTCCTCGTCTCGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PAFSMFPVYKTGQHQQLVTSSAD*SSSRTA Trigger: AGCTGTACGAGACGAGGAGCAGTCAGCTGAGGAAGT...GACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTTCAGCTGCCACAGCCTaGCTCTACAGTCCCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: FPAFSMFPVYKTGQHQQLSAATA*LYSPSI Trigger: TATGCTGGGACTGTAGAGGCAGGCTGTGGCAGCTGA...AAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
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| CDS-3UTR GCA 90 bp | CATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCCATGCCACATGATGTCAGCTaGCACAGCCTGCCTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: HSPCFLSIKQVNISSLSMPHDVS*HSLPLQ Trigger: CTGTAGAGGCAGGCTGTGGCAGCTGACATCATGTGG...CATGGACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR GCA 90 bp | AAAATAAATTCCTTTGTAATTTGTGGAGAGAAGCCAAAGACACCGGAGAAAGGTAGGGGTGGGTGTAGTTaGCCATCCGCAGGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KINSFVICGEKPKTPEKGRGGCS*PSAGCP Trigger: AGGGCACCCTGCGGATGGGCAACTACACCCACCCCT...ACCTTTCTCCGGTGTCTTTGGCTTCTCTCCACAAATTACAAAGGAATTTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| CDS-3UTR TCA 90 bp | CAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCCCATACCTTCTTGAAGTaGGGCATGTGCCAGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QHSPCFLSIKQVNISSLSHTFLK*GMCQRA Trigger: TGCTCTCTGGCACATGCCTCACTTCAAGAAGGTATG...GGACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR GCA 90 bp | CATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCCATGGTGCGATGCACGGGCTaGTTCTTCTTTTTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSPCFLSIKQVNISSLSMVRCTG*FFFFHA Trigger: GGCATGGAAAAAGAAGAAGCAGCCCGTGCATCGCAC...CATGGACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR GCA 90 bp | CCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCTCCTGTACCCACAGCTaGTGGTACCGATGTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PAFSMFPVYKTGQHQQLVSCTHS*WYRCCN Trigger: GTTACAACATCGGTACCAGCAGCTGTGGGTACAGGA...GACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR CCA 90 bp | CAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCCTGTCGCCGGTCTTCCTaGTCATTGATTCGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QHSPCFLSIKQVNISSLSCRRSS*SLIRMS Trigger: TGACATCCGAATCAATGACCAGGAAGACCGGCGACA...GGACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR CCA 90 bp | CAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCCTGTACCCACAGCTGCTaGTACCGATGTTGTAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHSPCFLSIKQVNISSLSCTHSC*YRCCNR Trigger: CCTGTTACAACATCGGTACCAGCAGCTGTGGGTACA...GGACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR TCA 90 bp | CCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCATTTTGATGGCTTGCTaGGTGGCCTTCTGTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PAFSMFPVYKTGQHQQLVILMAC*VAFCSC Trigger: ACAGGAACAGAAGGCCACTCAGCAAGCCATCAAAAT...GACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTTGGGGGCAGGTAGGTTaGTGCTTAAACACATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPAFSMFPVYKTGQHQQLWGQVG*CLNTFQ Trigger: CTGGAATGTGTTTAAGCAGCAACCTACCTGCCCCCA...AAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR TCA 90 bp | CATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCCATGGGTCTTCCTGGTCATTaGTTCGGATGTCATTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSPCFLSIKQVNISSLSMGLPGH*FGCHSV Trigger: AACTGAATGACATCCGAATCAATGACCAGGAAGACC...CATGGACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS-3UTR GCA 90 bp | AAAATAAATTCCTTTGTAATTTGTGGAGAGAAGCCAAAGACACCGGAGAAAGGTTCCTGTACCCACAGCTaGTGGTACCGATGTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KINSFVICGEKPKTPEKGSCTHS*WYRCCN Trigger: GTTACAACATCGGTACCAGCAGCTGTGGGTACAGGA...ACCTTTCTCCGGTGTCTTTGGCTTCTCTCCACAAATTACAAAGGAATTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| CDS-3UTR TCA 90 bp | AAAATAAATTCCTTTGTAATTTGTGGAGAGAAGCCAAAGACACCGGAGAAAGGTATTTTGATGGCTTGCTaGGTGGCCTTCTGTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KINSFVICGEKPKTPEKGILMAC*VAFCSC Trigger: ACAGGAACAGAAGGCCACTCAGCAAGCCATCAAAAT...ACCTTTCTCCGGTGTCTTTGGCTTCTCTCCACAAATTACAAAGGAATTTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
||
| CDS CCA 90 bp | CGGATGTCGACCACCGTCAGCGGCCGTCGGGGCGGCGGGCAGATCTaGCTGACCGTGCGATGCACGGGCTGCTTCTTCTTTTTCCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: RMSTTVSGRRGGGQI*LTVRCTGCFFFFHA Trigger: GGCATGGAAAAAGAAGAAGCAGCCCGTGCATCGCACGGTCAGCCAGATCTGCCCGCCGCCCCGACGGCCGCTGACGGTGGTCGACATCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000157048.4 ENSMUST00000189027.7 ENSMUST00000189711.7 |
||
| CDS TCA 90 bp | CTTTCCCTGGGCTTGCCAAGCTCTGCCTTGACGATGAGCGGGTTCTaGAACATGGAGTCACGCACGACCCCCAGCCTTTCGTTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LSLGLPSSALTMSGF*NMESRTTPSLSFSM Trigger: CATGGAGAACGAAAGGCTGGGGGTCGTGCGTGACTCCATGTTTCAGAACCCGCTCATCGTCAAGGCAGAGCTTGGCAAGCCCAGGGAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000157048.4 ENSMUST00000189711.7 |
||
| CDS TCA 90 bp | AGCTGCCACAGCCTGCCTCTACAGTCCCAGCATACCTTCTTGAAGTaGGGCATGTGCCAGAGAGCATCCAGCTTCACCGGAGGCTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SCHSLPLQSQHTFLK*GMCQRASSFTGGLY Trigger: GTACAAGCCTCCGGTGAAGCTGGATGCTCTCTGGCACATGCCTCACTTCAAGAAGGTATGCTGGGACTGTAGAGGCAGGCTGTGGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS TCA 90 bp | ATGTCAGCTGCCACAGCCTGCCTCTACAGTCCCAGCATACCTTCTTaGAGTGAGGCATGTGCCAGAGAGCATCCAGCTTCACCGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MSAATACLYSPSIPS*SEACAREHPASPEA Trigger: AGCCTCCGGTGAAGCTGGATGCTCTCTGGCACATGCCTCACTTCAAGAAGGTATGCTGGGACTGTAGAGGCAGGCTGTGGCAGCTGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
||
| CDS TCA 90 bp | ACTCCAAGGCTCTGTCTGCCAATACCCTTGACGATGAGCGGGTTCTaGAACATGGAGTCACGCACGACCCCCAGCCTTTCGTTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TPRLCLPIPLTMSGF*NMESRTTPSLSFSM Trigger: CATGGAGAACGAAAGGCTGGGGGTCGTGCGTGACTCCATGTTTCAGAACCCGCTCATCGTCAAGGGTATTGGCAGACAGAGCCTTGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
||
| CDS-3UTR CAA 90 bp | GCCGTGTCGAGACCCCAGTCATTCCCAGAAGGGCAATTAAAACTCATGTTTGGAGTCACCAGGCCAGCTTaGACAGCCCCTCGGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: AVSRPQSFPEGQLKLMFGVTRPA*TAPRFM Trigger: CATGAACCGAGGGGCTGTCAAAGCTGGCCTGGTGAC...TCCAAACATGAGTTTTAATTGCCCTTCTGGGAATGACTGGGGTCTCGACACGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
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| CDS TCA 90 bp | TCAGTGCTGCACAAGTATGAGGAGTTCGAATCTCCAGAAGCCACATaGTGTCAGCTGCCACAGCCTGCCTCTACAGTCCCAGCATACCTT | + |
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Preference number: 5 (lower is better) Translates to: SVLHKYEEFESPEAT*CQLPQPASTVPAYL Trigger: AAGGTATGCTGGGACTGTAGAGGCAGGCTGTGGCAGCTGACATCATGTGGCTTCTGGAGATTCGAACTCCTCATACTTGTGCAGCACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
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| CDS-3UTR CAA 90 bp | TTGAGGAGGATGGTGGTTTCTAGGCAGAGGAAAACTGGGGGAAGACAAGAGTTGTCTTCCTTGTGGGCTTaGAGGGCTCTCTGGCGATCA | + |
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Preference number: 5 (lower is better) Translates to: LRRMVVSRQRKTGGRQELSSLWA*RALWRS Trigger: TGATCGCCAGAGAGCCCTCAAAGCCCACAAGGAAGA...CAACTCTTGTCTTCCCCCAGTTTTCCTCTGCCTAGAAACCACCATCCTCCTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
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| CDS-3UTR CAA 90 bp | TTGAGGAGGATGGTGGTTTCTAGGCAGAGGAAAACTGGGGGAAGACAAGAGTTGGTGGGGGCAGGTAGGTaGCTGCTTAAACACATTCCA | + |
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Preference number: 5 (lower is better) Translates to: LRRMVVSRQRKTGGRQELVGAGR*LLKHIP Trigger: TGGAATGTGTTTAAGCAGCAACCTACCTGCCCCCAC...CAACTCTTGTCTTCCCCCAGTTTTCCTCTGCCTAGAAACCACCATCCTCCTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000189711.7 |
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| CDS-3UTR CAA 90 bp | CTCTTCCCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGGTCACCAGGCCAGCTTaGACAGCCCCTCGGTTCATG | + |
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Preference number: 5 (lower is better) Translates to: LFPAFSMFPVYKTGQHQQVTRPA*TAPRFM Trigger: CATGAACCGAGGGGCTGTCAAAGCTGGCCTGGTGAC...CTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGGGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
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| CDS-3UTR CAA 90 bp | CCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTGTCGTGGGGGCAGGTAGGTaGCTGCTTAAACACATTCCA | + |
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Preference number: 5 (lower is better) Translates to: PAFSMFPVYKTGQHQQLVVGAGR*LLKHIP Trigger: TGGAATGTGTTTAAGCAGCAACCTACCTGCCCCCAC...GACAAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
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| CDS-3UTR CAA 90 bp | TTCCCAGCATTCTCCATGTTTCCTGTCTATAAAACAGGTCAACATCAGCAGCTTCGGTCTTCCTGGTCATaGATTCGGATGTCATTCAGT | + |
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Preference number: 5 (lower is better) Translates to: FPAFSMFPVYKTGQHQQLRSSWS*IRMSFS Trigger: ACTGAATGACATCCGAATCAATGACCAGGAAGACCG...AAGCTGCTGATGTTGACCTGTTTTATAGACAGGAAACATGGAGAATGCTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
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| CDS TCA 72 bp | CCGTCAGCGGCCGTCGGGGCGGCGGGCAGATCTGGCTaGCCGTGCGATGCACGGGCTGCTTCTTCTTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: PSAAVGAAGRSG*PCDARAASSFS Trigger: GGAAAAAGAAGAAGCAGCCCGTGCATCGCACGGTCAGCCAGATCTGCCCGCCGCCCCGACGGCCGCTGACGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000157048.4 ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| CDS CCA 72 bp | ACCACCGTCAGCGGCCGTCGGGGCGGCGGGCAGATCTaGCTGACCGTGCGATGCACGGGCTGCTTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: TTVSGRRGGGQI*LTVRCTGCFFF Trigger: AAAGAAGAAGCAGCCCGTGCATCGCACGGTCAGCCAGATCTGCCCGCCGCCCCGACGGCCGCTGACGGTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000157048.4 ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| CDS GCA 72 bp | CGTCGGGGCGGCGGGCAGATCTGGCTGACCGTGCGATaGACGGGCTGCTTCTTCTTTTTCCATGCCGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RRGGGQIWLTVR*TGCFFFFHAVR Trigger: CCTCACGGCATGGAAAAAGAAGAAGCAGCCCGTGCATCGCACGGTCAGCCAGATCTGCCCGCCGCCCCGACG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000157048.4 ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| CDS GCA 72 bp | TGGAGTCACGCACGACCCCCAGCCTTTCGTTCTCCATaGCCGTACGGATGTCGACCACCGTCAGCGGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: WSHARPPAFRSP*PYGCRPPSAAV Trigger: GACGGCCGCTGACGGTGGTCGACATCCGTACGGGCATGGAGAACGAAAGGCTGGGGGTCGTGCGTGACTCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000157048.4 ENSMUST00000189027.7 ENSMUST00000189711.7 |
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| CDS TCA 72 bp | GGCTTGCCAAGCTCTGCCTTGACGATGAGCGGGTTCTaGAACATGGAGTCACGCACGACCCCCAGCCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: GLPSSALTMSGF*NMESRTTPSLS Trigger: CGAAAGGCTGGGGGTCGTGCGTGACTCCATGTTTCAGAACCCGCTCATCGTCAAGGCAGAGCTTGGCAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000157048.4 ENSMUST00000189711.7 |
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| CDS TCA 72 bp | CTCTGTCTGCCAATACCCTTGACGATGAGCGGGTTCTaGAACATGGAGTCACGCACGACCCCCAGCCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: LCLPIPLTMSGF*NMESRTTPSLS Trigger: CGAAAGGCTGGGGGTCGTGCGTGACTCCATGTTTCAGAACCCGCTCATCGTCAAGGGTATTGGCAGACAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189027.7 |
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| CDS TCA 72 bp | AGCCTGCCTCTACAGTCCCAGCATACCTTCTTGAAGTaGGGCATGTGCCAGAGAGCATCCAGCTTCACCGGA | + |
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Preference number: 6 (lower is better) Translates to: SLPLQSQHTFLK*GMCQRASSFTG Trigger: TCCGGTGAAGCTGGATGCTCTCTGGCACATGCCTCACTTCAAGAAGGTATGCTGGGACTGTAGAGGCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157048.4 |
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