RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP73 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094282

Ensembl transcript IDs: ENSMUST00000177908.2

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GCGCAGGGCTCCAGACGCTGCACTTTCCGCTGCAGCCGCGCGCGTTaGAGCCGCAGCTCCTTCAGCTGTGTACGCAGCCGCCTCAACTCG +
Preference number: 5 (lower is better)
Translates to: AQGSRRCTFRCSRAR*SRSSFSCVRSRLNS
Trigger: CGAGTTGAGGCGGCTGCGTACACAGCTGAAGGAGCTGCGGCTGCAACGCGCGCGGCTGCAGCGGAAAGTGCAGCGTCTGGAGCCCTGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 90 bp TTTTCCAGGGCTCGCTTCAGTATTCGCGCGCAGGGCTCCAGACGCTaGACTTTCCGCTGCAGCCGCGCGCGTTGCAGCCGCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FSRARFSIRAQGSRR*TFRCSRARCSRSSF
Trigger: GAAGGAGCTGCGGCTGCAACGCGCGCGGCTGCAGCGGAAAGTGCAGCGTCTGGAGCCCTGCGCGCGAATACTGAAGCGAGCCCTGGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 90 bp GCTCCTTCAGCTGTGTACGCAGCCGCCTCAACTCGGCGTCCAGGTTaGCCGTTATCTTCCGCTCCTCTATGGCTTTCCGCGCTGCACGCC +
Preference number: 5 (lower is better)
Translates to: APSAVYAAASTRRPG*PLSSAPLWLSALHA
Trigger: GGCGTGCAGCGCGGAAAGCCATAGAGGAGCGGAAGATAACGGGCAACCTGGACGCCGAGTTGAGGCGGCTGCGTACACAGCTGAAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS TCA 90 bp CTCACATCCAGGGTTTGCCTCCGACCCTGTTGCAGGCGAACAAGATaGTACAGGTTGAGCACAGCCATCCTAGCACGTCCCAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LTSRVCLRPCCRRTR*YRLSTAILARPRSS
Trigger: GCTGCTCCTGGGACGTGCTAGGATGGCTGTGCTCAACCTGTATCATCTTGTTCGCCTGCAACAGGGTCGGAGGCAAACCCTGGATGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS TCA 90 bp CTGCACGCCGGGCCTCAACTTCCTTCAGGAATTTGTCATAGGAGATaGCGGAGCCCTGTAGCTCCTGTCCTTTCTGCTCCAGCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: LHAGPQLPSGICHRR*RSPVAPVLSAPALS
Trigger: GGAGAGAGCTGGAGCAGAAAGGACAGGAGCTACAGGGCTCCGTCATCTCCTATGACAAATTCCTGAAGGAAGTTGAGGCCCGGCGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS TCA 90 bp AGCAGTAGCTGTAGGCTGAGCCAGGGCAAGTTTGGCCAGTGTGGCTaGGATGTTCATGATAAACCGCTTCACCTCCTCCAGCTGCCCCTC +
Preference number: 5 (lower is better)
Translates to: SSSCRLSQGKFGQCG*DVHDKPLHLLQLPL
Trigger: GAGGGGCAGCTGGAGGAGGTGAAGCGGTTTATCATGAACATCTCAGCCACACTGGCCAAACTTGCCCTGGCTCAGCCTACAGCTACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS CCA 90 bp TGCTCGCGCGCCGCCTCCAACTGCTCCACCAGTTGCGTCCGTTGCTaGTTCAGATTCAGCATCTCATCCTGCTTCTCACTCTGCAAACTA +
Preference number: 5 (lower is better)
Translates to: CSRAASNCSTSCVRC*FRFSISSCFSLCKL
Trigger: TAGTTTGCAGAGTGAGAAGCAGGATGAGATGCTGAATCTGAACCAGCAACGGACGCAACTGGTGGAGCAGTTGGAGGCGGCGCGCGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 90 bp TCTCCACCAGTCGTTTTTGTTCCTCCAGCTTCAGTGCTGCCTTTGTaGTTACCAGGGTCTCGAAGCGCGCCACCAGGTCAGAAACCTCCT +
Preference number: 5 (lower is better)
Translates to: SPPVVFVPPASVLPL*LPGSRSAPPGQKPP
Trigger: AGGAGGTTTCTGACCTGGTGGCGCGCTTCGAGACCCTGGTAAGCACAAAGGCAGCACTGAAGCTGGAGGAACAAAAACGACTGGTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 90 bp GTCCGTTGCTGGTTCAGATTCAGCATCTCATCCTGCTTCTCACTCTaGAAACTAAGCAGCTGCGCACGGGTCGACTCCATCTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: VRCWFRFSISSCFSL*KLSSCARVDSISTS
Trigger: ACTGGTGGAGATGGAGTCGACCCGTGCGCAGCTGCTTAGTTTGCAGAGTGAGAAGCAGGATGAGATGCTGAATCTGAACCAGCAACGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS TCA 90 bp CACAGCCATCCTAGCACGTCCCAGGAGCAGCGTCTTTTCCGATGCTaGGTTCAGAATTTCAGTCCACTTAGATTCCCACTGCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: HSHPSTSQEQRLFRC*VQNFSPLRFPLLSV
Trigger: CACAGACAGCAGTGGGAATCTAAGTGGACTGAAATTCTGAACTCAGCATCGGAAAAGACGCTGCTCCTGGGACGTGCTAGGATGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 90 bp TGGTTCACGGACTCTATCGTGCTGCGGTATTCCTTCTTCTGGGCCTaGAAACCCAGGTCCGCAACTGCTAACTCTTCCTTCTTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: WFTDSIVLRYSFFWA*KPRSATANSSFFSN
Trigger: ATTGGAGAAGAAGGAAGAGTTAGCAGTTGCGGACCTGGGTTTGCAGGCCCAGAAGAAGGAATACCGCAGCACGATAGAGTCCGTGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS CAA 90 bp CGCGCAGGGCTCCAGACGCTGCACTTTCCGCTGCAGCCGCGCGCGTaGCAGCCGCAGCTCCTTCAGCTGTGTACGCAGCCGCCTCAACTC +
Preference number: 6 (lower is better)
Translates to: RAGLQTLHFPLQPRA*QPQLLQLCTQPPQL
Trigger: GAGTTGAGGCGGCTGCGTACACAGCTGAAGGAGCTGCGGCTGCAACGCGCGCGGCTGCAGCGGAAAGTGCAGCGTCTGGAGCCCTGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 72 bp ATTCGCGCGCAGGGCTCCAGACGCTGCACTTTCCGCTaGAGCCGCGCGCGTTGCAGCCGCAGCTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: IRAQGSRRCTFR*SRARCSRSSFS
Trigger: GCTGAAGGAGCTGCGGCTGCAACGCGCGCGGCTGCAGCGGAAAGTGCAGCGTCTGGAGCCCTGCGCGCGAAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 72 bp GCTCGCTTCAGTATTCGCGCGCAGGGCTCCAGACGCTaGACTTTCCGCTGCAGCCGCGCGCGTTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: ARFSIRAQGSRR*TFRCSRARCSR
Trigger: GCGGCTGCAACGCGCGCGGCTGCAGCGGAAAGTGCAGCGTCTGGAGCCCTGCGCGCGAATACTGAAGCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS CAA 90 bp AGCTCCTTCAGCTGTGTACGCAGCCGCCTCAACTCGGCGTCCAGGTaGCCCGTTATCTTCCGCTCCTCTATGGCTTTCCGCGCTGCACGC +
Preference number: 6 (lower is better)
Translates to: SSFSCVRSRLNSASR*PVIFRSSMAFRAAR
Trigger: GCGTGCAGCGCGGAAAGCCATAGAGGAGCGGAAGATAACGGGCAACCTGGACGCCGAGTTGAGGCGGCTGCGTACACAGCTGAAGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 72 bp GCTGTGTACGCAGCCGCCTCAACTCGGCGTCCAGGTTaGCCGTTATCTTCCGCTCCTCTATGGCTTTCCGCG +
Preference number: 6 (lower is better)
Translates to: AVYAAASTRRPG*PLSSAPLWLSA
Trigger: CGCGGAAAGCCATAGAGGAGCGGAAGATAACGGGCAACCTGGACGCCGAGTTGAGGCGGCTGCGTACACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 72 bp TCCCACTGCTGTCTGTGCTCGCGCGCCGCCTCCAACTaGTCCACCAGTTGCGTCCGTTGCTGGTTCAGATTC +
Preference number: 6 (lower is better)
Translates to: SHCCLCSRAASN*STSCVRCWFRF
Trigger: GAATCTGAACCAGCAACGGACGCAACTGGTGGAGCAGTTGGAGGCGGCGCGCGAGCACAGACAGCAGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 72 bp CTGTGCTCGCGCGCCGCCTCCAACTGCTCCACCAGTTaGGTCCGTTGCTGGTTCAGATTCAGCATCTCATCC +
Preference number: 6 (lower is better)
Translates to: LCSRAASNCSTS*VRCWFRFSISS
Trigger: GGATGAGATGCTGAATCTGAACCAGCAACGGACGCAACTGGTGGAGCAGTTGGAGGCGGCGCGCGAGCACAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS CAA 72 bp AGCTGTGTACGCAGCCGCCTCAACTCGGCGTCCAGGTaGCCCGTTATCTTCCGCTCCTCTATGGCTTTCCGC +
Preference number: 6 (lower is better)
Translates to: SCVRSRLNSASR*PVIFRSSMAFR
Trigger: GCGGAAAGCCATAGAGGAGCGGAAGATAACGGGCAACCTGGACGCCGAGTTGAGGCGGCTGCGTACACAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS CAA 72 bp GCGCGCCGCCTCCAACTGCTCCACCAGTTGCGTCCGTaGCTGGTTCAGATTCAGCATCTCATCCTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: ARRLQLLHQLRP*LVQIQHLILLL
Trigger: GAGAAGCAGGATGAGATGCTGAATCTGAACCAGCAACGGACGCAACTGGTGGAGCAGTTGGAGGCGGCGCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS CAA 72 bp CTCCAGCTGCCCCTCCACGTCCCTCACATCCAGGGTTaGCCTCCGACCCTGTTGCAGGCGAACAAGATGATA +
Preference number: 6 (lower is better)
Translates to: LQLPLHVPHIQG*PPTLLQANKMI
Trigger: TATCATCTTGTTCGCCTGCAACAGGGTCGGAGGCAAACCCTGGATGTGAGGGACGTGGAGGGGCAGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS CAA 90 bp CTGCCCCTCCACGTCCCTCACATCCAGGGTTTGCCTCCGACCCTGTaGCAGGCGAACAAGATGATACAGGTTGAGCACAGCCATCCTAGC +
Preference number: 6 (lower is better)
Translates to: LPLHVPHIQGLPPTL*QANKMIQVEHSHPS
Trigger: GCTAGGATGGCTGTGCTCAACCTGTATCATCTTGTTCGCCTGCAACAGGGTCGGAGGCAAACCCTGGATGTGAGGGACGTGGAGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS CAA 90 bp TCTGTGCTCGCGCGCCGCCTCCAACTGCTCCACCAGTTGCGTCCGTaGCTGGTTCAGATTCAGCATCTCATCCTGCTTCTCACTCTGCAA +
Preference number: 6 (lower is better)
Translates to: SVLARRLQLLHQLRP*LVQIQHLILLLTLQ
Trigger: TTGCAGAGTGAGAAGCAGGATGAGATGCTGAATCTGAACCAGCAACGGACGCAACTGGTGGAGCAGTTGGAGGCGGCGCGCGAGCACAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 72 bp GCTCTCTCCAGCGCTGGTTCACGGACTCTATCGTGCTaGGGTATTCCTTCTTCTGGGCCTGCAAACCCAGGT +
Preference number: 6 (lower is better)
Translates to: ALSSAGSRTLSC*GIPSSGPANPG
Trigger: ACCTGGGTTTGCAGGCCCAGAAGAAGGAATACCGCAGCACGATAGAGTCCGTGAACCAGCGCTGGAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 72 bp CCAGCTCTCTCCAGCGCTGGTTCACGGACTCTATCGTaGTGCGGTATTCCTTCTTCTGGGCCTGCAAACCCA +
Preference number: 6 (lower is better)
Translates to: PALSSAGSRTLS*CGIPSSGPANP
Trigger: TGGGTTTGCAGGCCCAGAAGAAGGAATACCGCAGCACGATAGAGTCCGTGAACCAGCGCTGGAGAGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS TCA 72 bp AGGGTTTGCCTCCGACCCTGTTGCAGGCGAACAAGATaGTACAGGTTGAGCACAGCCATCCTAGCACGTCCC +
Preference number: 6 (lower is better)
Translates to: RVCLRPCCRRTR*YRLSTAILARP
Trigger: GGGACGTGCTAGGATGGCTGTGCTCAACCTGTATCATCTTGTTCGCCTGCAACAGGGTCGGAGGCAAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 72 bp CTCCACCAGTCGTTTTTGTTCCTCCAGCTTCAGTGCTaGCTTTGTGCTTACCAGGGTCTCGAAGCGCGCCAC +
Preference number: 6 (lower is better)
Translates to: LHQSFLFLQLQC*LCAYQGLEARH
Trigger: GTGGCGCGCTTCGAGACCCTGGTAAGCACAAAGGCAGCACTGAAGCTGGAGGAACAAAAACGACTGGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS CCA 72 bp GCCGCCTCCAACTGCTCCACCAGTTGCGTCCGTTGCTaGTTCAGATTCAGCATCTCATCCTGCTTCTCACTC +
Preference number: 6 (lower is better)
Translates to: AASNCSTSCVRC*FRFSISSCFSL
Trigger: GAGTGAGAAGCAGGATGAGATGCTGAATCTGAACCAGCAACGGACGCAACTGGTGGAGCAGTTGGAGGCGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 72 bp TGCGTCCGTTGCTGGTTCAGATTCAGCATCTCATCCTaGTTCTCACTCTGCAAACTAAGCAGCTGCGCACGG +
Preference number: 6 (lower is better)
Translates to: CVRCWFRFSISS*FSLCKLSSCAR
Trigger: CCGTGCGCAGCTGCTTAGTTTGCAGAGTGAGAAGCAGGATGAGATGCTGAATCTGAACCAGCAACGGACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS CCA 72 bp TTCACGGACTCTATCGTGCTGCGGTATTCCTTCTTCTaGGCCTGCAAACCCAGGTCCGCAACTGCTAACTCT +
Preference number: 6 (lower is better)
Translates to: FTDSIVLRYSFF*ACKPRSATANS
Trigger: AGAGTTAGCAGTTGCGGACCTGGGTTTGCAGGCCCAGAAGAAGGAATACCGCAGCACGATAGAGTCCGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS TCA 72 bp GGGCCTCAACTTCCTTCAGGAATTTGTCATAGGAGATaGCGGAGCCCTGTAGCTCCTGTCCTTTCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: GPQLPSGICHRR*RSPVAPVLSAP
Trigger: TGGAGCAGAAAGGACAGGAGCTACAGGGCTCCGTCATCTCCTATGACAAATTCCTGAAGGAAGTTGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 72 bp TGGTTCAGATTCAGCATCTCATCCTGCTTCTCACTCTaGAAACTAAGCAGCTGCGCACGGGTCGACTCCATC +
Preference number: 6 (lower is better)
Translates to: WFRFSISSCFSL*KLSSCARVDSI
Trigger: GATGGAGTCGACCCGTGCGCAGCTGCTTAGTTTGCAGAGTGAGAAGCAGGATGAGATGCTGAATCTGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS TCA 72 bp CCTAGCACGTCCCAGGAGCAGCGTCTTTTCCGATGCTaGGTTCAGAATTTCAGTCCACTTAGATTCCCACTG +
Preference number: 6 (lower is better)
Translates to: PSTSQEQRLFRC*VQNFSPLRFPL
Trigger: CAGTGGGAATCTAAGTGGACTGAAATTCTGAACTCAGCATCGGAAAAGACGCTGCTCCTGGGACGTGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2
CDS GCA 72 bp GCAACTGCTAACTCTTCCTTCTTCTCCAATATAAGCTaGAAGACCGAACTGTCATCCCCAGTCTGCTCCAGT +
Preference number: 6 (lower is better)
Translates to: ATANSSFFSNIS*KTELSSPVCSS
Trigger: ACTGGAGCAGACTGGGGATGACAGTTCGGTCTTGCAGCTTATATTGGAGAAGAAGGAAGAGTTAGCAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177908.2