Pregenerated sensors for CFAP69 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040473Ensembl transcript IDs: ENSMUST00000054865.13, ENSMUST00000061008.10, ENSMUST00000124734.8, ENSMUST00000132510.8, ENSMUST00000135252.3, ENSMUST00000148347.8, ENSMUST00000155048.2, ENSMUST00000196165.5
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTCAGAACCCAGAGTTTCTCGACAAGCTGATTCTCAAGCAGGAGTaGCGACTGGACCATTGCCTTCGCCAAGCCACCGACCTCTACCAT | + |
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Preference number: 1 (lower is better) Translates to: FQNPEFLDKLILKQE*RLDHCLRQATDLYH Trigger: ATGGTAGAGGTCGGTGGCTTGGCGAAGGCAATGGTCCAGTCGGCACTCCTGCTTGAGAATCAGCTTGTCGAGAAACTCTGGGTTCTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR GCA 90 bp | TTTCTCGACAAGCTGATTCTCAAGCAGGAGTGCCGACTGGACCATTaGCTTCGCCAAGCCACCGACCTCTACCATTTTAATCTTGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: FLDKLILKQECRLDH*LRQATDLYHFNLVG Trigger: TCCTACAAGATTAAAATGGTAGAGGTCGGTGGCTTGGCGAAGGCAATGGTCCAGTCGGCACTCCTGCTTGAGAATCAGCTTGTCGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR CCA 90 bp | TCTGGGACTGGAGTTATAGATGGTTGTGAACTGTCATGTTGGTGCTaGGAATTAAGCCTGGGTACCTCTGGAAGAGCAGCCAGTGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: SGTGVIDGCELSCWC*ELSLGTSGRAASAV Trigger: AACAGCACTGGCTGCTCTTCCAGAGGTACCCAGGCTTAATTCCCAGCACCAACATGACAGTTCACAACCATCTATAACTCCAGTCCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR TCA 90 bp | ACTTGTTTCCACGGCCGCCTGTACCATGGAAACTGTTACCATGAATaGAGTAGGAATCCTCATGCCCACACCACTCCAGAAATGCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: TCFHGRLYHGNCYHE*SRNPHAHTTPEMQG Trigger: TCCTTGCATTTCTGGAGTGGTGTGGGCATGAGGATTCCTACTTCATTCATGGTAACAGTTTCCATGGTACAGGCGGCCGTGGAAACAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR TCA 90 bp | AAAGGTCCTTGTTCACAGTCTCATCTTCCAGATAAACCATGGCTCTaGGGAGCCGTAGAGTGTAACGCATCTGGGCGAACTTGTTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: KGPCSQSHLPDKPWL*GAVECNASGRTCFH Trigger: GTGGAAACAAGTTCGCCCAGATGCGTTACACTCTACGGCTCCTCAGAGCCATGGTTTATCTGGAAGATGAGACTGTGAACAAGGACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR CCA 90 bp | TCATGCCCACACCACTCCAGAAATGCAAGGATCCGAGAATTGCCGTaGCATGACATATACTCTTCTATTAACAAAGGAGCCACAGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: SCPHHSRNARIRELP*HDIYSSINKGATED Trigger: GTCCTCTGTGGCTCCTTTGTTAATAGAAGAGTATATGTCATGCCACGGCAATTCTCGGATCCTTGCATTTCTGGAGTGGTGTGGGCATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR GCA 90 bp | TCTTCTATTAACAAAGGAGCCACAGAGGACAAGGTGGCAATCGCATaGAGTTGTAGTTCTTCATACTGTGCTGCAGACCACTCCATGATC | + |
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Preference number: 1 (lower is better) Translates to: SSINKGATEDKVAIA*SCSSSYCAADHSMI Trigger: GATCATGGAGTGGTCTGCAGCACAGTATGAAGAACTACAACTGCATGCGATTGCCACCTTGTCCTCTGTGGCTCCTTTGTTAATAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR GCA 90 bp | AATCCTCATGCCCACACCACTCCAGAAATGCAAGGATCCGAGAATTaGCGTGGCATGACATATACTCTTCTATTAACAAAGGAGCCACAG | + |
|
Preference number: 1 (lower is better) Translates to: NPHAHTTPEMQGSEN*RGMTYTLLLTKEPQ Trigger: CTGTGGCTCCTTTGTTAATAGAAGAGTATATGTCATGCCACGGCAATTCTCGGATCCTTGCATTTCTGGAGTGGTGTGGGCATGAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR TCA 90 bp | AGGCTGGCAGCAGTCAGGTCTTTCTTCCCACGCCAAGCATTGACATaGGCAGAAGTTTTGGGATTATCACAAAATTCAACCATTATTCCA | + |
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Preference number: 1 (lower is better) Translates to: RLAAVRSFFPRQALT*AEVLGLSQNSTIIP Trigger: TGGAATAATGGTTGAATTTTGTGATAATCCCAAAACTTCTGCTCATGTCAATGCTTGGCGTGGGAAGAAAGACCTGACTGCTGCCAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR CCA 90 bp | ATGACATATACTCTTCTATTAACAAAGGAGCCACAGAGGACAAGGTaGCAATCGCATGCAGTTGTAGTTCTTCATACTGTGCTGCAGACC | + |
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Preference number: 1 (lower is better) Translates to: MTYTLLLTKEPQRTR*QSHAVVVLHTVLQT Trigger: GGTCTGCAGCACAGTATGAAGAACTACAACTGCATGCGATTGCCACCTTGTCCTCTGTGGCTCCTTTGTTAATAGAAGAGTATATGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR TCA 90 bp | ATAGATGGGCAGTTAGCAGGAAGGGGCATGGTCTTTTGTTCTTCTTaGAAACTAGTAAATAGAGGTCTCTTTGTATCAACAATCTTGCCG | + |
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Preference number: 1 (lower is better) Translates to: IDGQLAGRGMVFCSS*KLVNRGLFVSTILP Trigger: CGGCAAGATTGTTGATACAAAGAGACCTCTATTTACTAGTTTTCAAGAAGAACAAAAGACCATGCCCCTTCCTGCTAACTGCCCATCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR TCA 90 bp | AATCATAACATCCCAAAATGCAGCACCAAATGCTGTCTAACGTACTaGAAAGAAGGACATTGTAGCCTAAACCCCTCTGTAAATTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: NHNIPKCSTKCCLTY*KEGHCSLNPSVNSW Trigger: CCAAGAATTTACAGAGGGGTTTAGGCTACAATGTCCTTCTTTTCAGTACGTTAGACAGCATTTGGTGCTGCATTTTGGGATGTTATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR TCA 90 bp | TACCCTGTGTATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTaGGAAAATTACCTGCCTTATTTTGTGTTCTCTCTTCCTACTGGA | + |
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Preference number: 1 (lower is better) Translates to: YPVYSFCIKQRSKYL*ENYLPYFVFSLPTG Trigger: TCCAGTAGGAAGAGAGAACACAAAATAAGGCAGGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTATACACAGGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR CCA 90 bp | TTTGAGGCACGTTTATTCAAAAACCCTGTTCTTTGGTACTTGGTTTaGGAAAGGTTAGTATGGATGCATTTATGTTTTGTGTTAGAGTAC | + |
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Preference number: 1 (lower is better) Translates to: FEARLFKNPVLWYLV*ERLVWMHLCFVLEY Trigger: GTACTCTAACACAAAACATAAATGCATCCATACTAACCTTTCCCAAACCAAGTACCAAAGAACAGGGTTTTTGAATAAACGTGCCTCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTCCTGGCTCACTGTGTGATTGTGCACCATGTGAGTaGCTGGTGCCTGCGGGGACC | + |
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Preference number: 2 (lower is better) Translates to: SRAVCEAIGCELPGSLCDCAPCE*LVPAGT Trigger: GGTCCCCGCAGGCACCAGGCACTCACATGGTGCACA...ATCACACAGTGAGCCAGGAAGTTCACAACCGATAGCCTCACAAACTGCCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTCCTGGCTCACTGTGTGATTCCAGAGTGGACATGTaGCCATGGCCAATCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SRAVCEAIGCELPGSLCDSRVDM*PWPIKG Trigger: ACCCTTGATTGGCCATGGCCACATGTCCACTCTGGA...ATCACACAGTGAGCCAGGAAGTTCACAACCGATAGCCTCACAAACTGCCCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTCCTGGCTCACTGTGTGATTTAGCTTCAGCCCTTTaGCTCAACAGTTCTCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: SRAVCEAIGCELPGSLCDLASAL*LNSSHS Trigger: ACTGTGAGAACTGTTGAGTCAAAGGGCTGAAGCTAA...ATCACACAGTGAGCCAGGAAGTTCACAACCGATAGCCTCACAAACTGCCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR TCA 90 bp | GTACCTCTGGAAGAGCAGCCAGTGCTGTTAAACACTAAGCCATCTCTCCAGCTGCTGATGATAGCACCTTaGTTCTTGGCTCCATTTAGG | + |
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Preference number: 2 (lower is better) Translates to: VPLEEQPVLLNTKPSLQLLMIAP*FLAPFR Trigger: CCTAAATGGAGCCAAGAATCAAGGTGCTATCATCAG...CAGCTGGAGAGATGGCTTAGTGTTTAACAGCACTGGCTGCTCTTCCAGAGGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCTACTGGATAGAATAATATGTAGACATCAGATGACACTGATGGGGTCAGTCCACCATGTGAGTGCCTaGTGCCTGCGGGGACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: FLLDRIICRHQMTLMGSVHHVSA*CLRGPE Trigger: TTCTGGTCCCCGCAGGCACCAGGCACTCACATGGTG...GACTGACCCCATCAGTGTCATCTGATGTCTACATATTATTCTATCCAGTAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCGGTCTGTGCACCATGTaGGTGCCTGGTGCCTGCGGG | + |
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Preference number: 2 (lower is better) Translates to: LCIVSALSSVVNICEKITGLCTM*VPGACG Trigger: CCCGCAGGCACCAGGCACTCACATGGTGCACAGACC...GGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTATACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR CAA 90 bp | GAATCCTCATGCCCACACCACTCCAGAAATGCAAGGATCCGAGAATaGCCGTGGCATGACATATACTCTTCTATTAACAAAGGAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: ESSCPHHSRNARIRE*PWHDIYSSINKGAT Trigger: TGTGGCTCCTTTGTTAATAGAAGAGTATATGTCATGCCACGGCAATTCTCGGATCCTTGCATTTCTGGAGTGGTGTGGGCATGAGGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAAATAGAAAGAAAAGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTGGACCAGAAGAGAGATaGCATCCTCTGGGACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: IGNRKKSRAVCEAIGCELGPEER*HPLGLE Trigger: CTCCAGTCCCAGAGGATGTCATCTCTCTTCTGGTCC...AAGTTCACAACCGATAGCCTCACAAACTGCCCTGCTTTTCTTTCTATTTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTGAGGTCAGTGCATTGCTGTATTTGAAGATGTCAAAGGAAAGGCTGCCAACATGTTTTCTCCCTTaGCTTCAGGGAACCGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: PFEVSALLYLKMSKERLPTCFLP*LQGTES Trigger: ACTCTCGGTTCCCTGAAGGCAAGGGAGAAAACATGT...TGGCAGCCTTTCCTTTGACATCTTCAAATACAGCAATGCACTGACCTCAAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTGAGGTCAGTGCATTGCTGTATTTGAAGATGTCAAAGGAAAGGCTGCCATTAGCTTCAGCCCTTTaGCTCAACAGTTCTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: PFEVSALLYLKMSKERLPLASAL*LNSSHS Trigger: ACTGTGAGAACTGTTGAGTCAAAGGGCTGAAGCTAA...TGGCAGCCTTTCCTTTGACATCTTCAAATACAGCAATGCACTGACCTCAAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCTACTGGATAGAATAATATGTAGACATCAGATGACACTGATGGGGTCAGTCTCCAGAGTGGACATGTaGCCATGGCCAATCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: FLLDRIICRHQMTLMGSVSRVDM*PWPIKG Trigger: ACCCTTGATTGGCCATGGCCACATGTCCACTCTGGA...GACTGACCCCATCAGTGTCATCTGATGTCTACATATTATTCTATCCAGTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR CCA 90 bp | TGCAATAGATGGGCAGTTAGCAGGAAGGGGCATGGTCTTTTGTTCTTCTTGAAAATTCCGCTGGCTGCTTaGGCTTTCACCATTAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: CNRWAVSRKGHGLLFFLKIPLAA*AFTIKV Trigger: CACTTTAATGGTGAAAGCCCAAGCAGCCAGCGGAAT...TTTCAAGAAGAACAAAAGACCATGCCCCTTCCTGCTAACTGCCCATCTATTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR CAA 90 bp | ACTTGTGGGCTGATTCTTCCCTTTGAGGTCAGTGCATTGCTGTATTaGAAGATGTCAAAGGAAAGGCTGCCAGAGACAAATCCTTCATCA | + |
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Preference number: 2 (lower is better) Translates to: TCGLILPFEVSALLY*KMSKERLPETNPSS Trigger: TGATGAAGGATTTGTCTCTGGCAGCCTTTCCTTTGACATCTTCAAATACAGCAATGCACTGACCTCAAAGGGAAGAATCAGCCCACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR GCA 90 bp | GAAGATGTCAAAGGAAAGGCTGCCAGAGACAAATCCTTCATCACTAACTTCATCGAACTGTCATGTTGGTaGTGGGAATTAAGCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: EDVKGKAARDKSFITNFIELSCW*WELSLG Trigger: ACCCAGGCTTAATTCCCAGCACCAACATGACAGTTC...GATGAAGTTAGTGATGAAGGATTTGTCTCTGGCAGCCTTTCCTTTGACATCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTCCTGGCTCACTGTGTGATTGTGAGAAAATTACCTaGCTTATTTTGTGTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SRAVCEAIGCELPGSLCDCEKIT*LILCSL Trigger: GAGAGAACACAAAATAAGGCAGGTAATTTTCTCACA...ATCACACAGTGAGCCAGGAAGTTCACAACCGATAGCCTCACAAACTGCCCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAAATAGAAAGAAAAGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTCTGTCATGTTGGTGCTaGGAATTAAGCCTGGGTACC | + |
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Preference number: 2 (lower is better) Translates to: IGNRKKSRAVCEAIGCELLSCWC*ELSLGT Trigger: GGTACCCAGGCTTAATTCCCAGCACCAACATGACAG...AAGTTCACAACCGATAGCCTCACAAACTGCCCTGCTTTTCTTTCTATTTCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR TCA 90 bp | TGGAGACAGGACACTGGGCCTATGTGTAAAACTGATACTCAACTGAATCATCAACTGATGATAGCACCTTaGTTCTTGGCTCCATTTAGG | + |
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Preference number: 2 (lower is better) Translates to: WRQDTGPMCKTDTQLNHQLMIAP*FLAPFR Trigger: CCTAAATGGAGCCAAGAATCAAGGTGCTATCATCAG...TTGATGATTCAGTTGAGTATCAGTTTTACACATAGGCCCAGTGTCCTGTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTGGGGTCTGTTTTCATTACATGAAGAACTATGTCAACTCCTTCAGTACCGAAGTAGAGAGATGCTaGAGGACTTTCAGAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: ILGVCFHYMKNYVNSFSTEVERC*RTFRTQ Trigger: CTGGGTTCTGAAAGTCCTGCAGCATCTCTCTACTTC...GGTACTGAAGGAGTTGACATAGTTCTTCATGTAATGAAAACAGACCCCAAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAAATAGAAAGAAAAGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTTGTGAACTGTCATGTTaGTGCTGGGAATTAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: IGNRKKSRAVCEAIGCELCELSC*CWELSL Trigger: CAGGCTTAATTCCCAGCACCAACATGACAGTTCACA...AAGTTCACAACCGATAGCCTCACAAACTGCCCTGCTTTTCTTTCTATTTCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGATGTCAAAGGAAAGGCTGCCAGAGACAAATCCTTCATCACTAACTTCATCCTAAATTATTCATGCTaGGAGATACAAAGCCCACAG | + |
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Preference number: 2 (lower is better) Translates to: EDVKGKAARDKSFITNFILNYSC*EIQSPQ Trigger: CTGTGGGCTTTGTATCTCCCAGCATGAATAATTTAG...GATGAAGTTAGTGATGAAGGATTTGTCTCTGGCAGCCTTTCCTTTGACATCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR TCA 90 bp | ATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCTGCCTTGCTGATTCTTCCCTTTaGGGTCAGTGCATTGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: IVSALSSVVNICEKITCLADSSL*GQCIAV Trigger: TACAGCAATGCACTGACCTCAAAGGGAAGAATCAGC...AAGGCAGGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR GCA 90 bp | TGGAGACAGGACACTGGGCCTATGTGTAAAACTGATACTCAACTGAATCATCAACTCCTAGTTTCTAAGTaGTATAAAGACTCATTGCTC | + |
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Preference number: 2 (lower is better) Translates to: WRQDTGPMCKTDTQLNHQLLVSK*YKDSLL Trigger: GAGCAATGAGTCTTTATAGCACTTAGAAACTAGGAG...TTGATGATTCAGTTGAGTATCAGTTTTACACATAGGCCCAGTGTCCTGTCTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTGGGGTCTGTTTTCATTACATGAAGAACTATGTCAACTCCTTCAGTACCAGTAATGTGTCAGACTaGATTTCTAAGGCAATGGCC | + |
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Preference number: 2 (lower is better) Translates to: ILGVCFHYMKNYVNSFSTSNVSD*ISKAMA Trigger: GGCCATTGCCTTAGAAATCCAGTCTGACACATTACT...GGTACTGAAGGAGTTGACATAGTTCTTCATGTAATGAAAACAGACCCCAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCACAAAGACCTGACAGAATAAGTAATGTGTCAGACTGGATTTCTAAGGCAAAGGTGGCAATCGCATaGAGTTGTAGTTCTTCATAC | + |
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Preference number: 2 (lower is better) Translates to: FSQRPDRISNVSDWISKAKVAIA*SCSSSY Trigger: GTATGAAGAACTACAACTGCATGCGATTGCCACCTT...TGCCTTAGAAATCCAGTCTGACACATTACTTATTCTGTCAGGTCTTTGTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAGCATTGACATGAGCAGAAGTTTTGGGATTATCACAAAATTCAACCATTATAACTGTTACCATGAATaGAGTAGGAATCCTCATGCC | + |
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Preference number: 2 (lower is better) Translates to: PSIDMSRSFGIITKFNHYNCYHE*SRNPHA Trigger: GGCATGAGGATTCCTACTTCATTCATGGTAACAGTT...ATAATGGTTGAATTTTGTGATAATCCCAAAACTTCTGCTCATGTCAATGCTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCAGTCTAAATTATTCATaGTGGGAGATACAAAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LCIVSALSSVVNICEKITSLNYS*WEIQSP Trigger: TGGGCTTTGTATCTCCCAGCATGAATAATTTAGACT...GGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTATACACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR GCA 72 bp | CCAGAGTTTCTCGACAAGCTGATTCTCAAGCAGGAGTaGCGACTGGACCATTGCCTTCGCCAAGCCACCGAC | + |
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Preference number: 3 (lower is better) Translates to: PEFLDKLILKQE*RLDHCLRQATD Trigger: GTCGGTGGCTTGGCGAAGGCAATGGTCCAGTCGGCACTCCTGCTTGAGAATCAGCTTGTCGAGAAACTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR GCA 72 bp | GACGCTGGGCTGTTTATGGCTCCCAAGAGCAAGGAGTaGTCAGATCTGGATGACTCTGAGGTAAGGTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: DAGLFMAPKSKE*SDLDDSEVRCS Trigger: GGAGCACCTTACCTCAGAGTCATCCAGATCTGAGCACTCCTTGCTCTTGGGAGCCATAAACAGCCCAGCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| 3UTR-3UTR CAA 90 bp | GTAACGCATCTGGGCGAACTTGTTTCCACGGCCGCCTGTACCATGGAAACTGTTGACCACTCCATGATCTaGAGTCTCTCAGGCTTTTTC | + |
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Preference number: 3 (lower is better) Translates to: VTHLGELVSTAACTMETVDHSMI*SLSGFF Trigger: GAAAAAGCCTGAGAGACTCAAGATCATGGAGTGGTC...AACAGTTTCCATGGTACAGGCGGCCGTGGAAACAAGTTCGCCCAGATGCGTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR TCA 72 bp | CACGGCCGCCTGTACCATGGAAACTGTTACCATGAATaGAGTAGGAATCCTCATGCCCACACCACTCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: HGRLYHGNCYHE*SRNPHAHTTPE Trigger: TTCTGGAGTGGTGTGGGCATGAGGATTCCTACTTCATTCATGGTAACAGTTTCCATGGTACAGGCGGCCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| 3UTR GCA 72 bp | AAGCTGATTCTCAAGCAGGAGTGCCGACTGGACCATTaGCTTCGCCAAGCCACCGACCTCTACCATTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: KLILKQECRLDH*LRQATDLYHFN Trigger: ATTAAAATGGTAGAGGTCGGTGGCTTGGCGAAGGCAATGGTCCAGTCGGCACTCCTGCTTGAGAATCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTCCTGGCTCACTGTGTGATTTTAACATGCTGTCCTaGCTTAGCATCACTTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SRAVCEAIGCELPGSLCDFNMLS*LSITCG Trigger: CCCACAAGTGATGCTAAGCAAGGACAGCATGTTAAA...ATCACACAGTGAGCCAGGAAGTTCACAACCGATAGCCTCACAAACTGCCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR CCA 72 bp | GGGACTGGAGTTATAGATGGTTGTGAACTGTCATGTTaGTGCTGGGAATTAAGCCTGGGTACCTCTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GTGVIDGCELSC*CWELSLGTSGR Trigger: TCTTCCAGAGGTACCCAGGCTTAATTCCCAGCACCAACATGACAGTTCACAACCATCTATAACTCCAGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR GCA 72 bp | GCCCACACCACTCCAGAAATGCAAGGATCCGAGAATTaGCGTGGCATGACATATACTCTTCTATTAACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: AHTTPEMQGSEN*RGMTYTLLLTK Trigger: CTTTGTTAATAGAAGAGTATATGTCATGCCACGGCAATTCTCGGATCCTTGCATTTCTGGAGTGGTGTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGGAAATAGAAAGAAAAGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTAAATGTAAGGTAGGGTaGCTGGAAGGAGATGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: IGNRKKSRAVCEAIGCELKCKVG*LEGDAS Trigger: GGAGGCATCTCCTTCCAGCAACCCTACCTTACATTT...AAGTTCACAACCGATAGCCTCACAAACTGCCCTGCTTTTCTTTCTATTTCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR TCA 72 bp | TTAACATGCTGTCCTTGCTTAGCATCACTTGTGGGCTaGTTCTTCCCTTTGAGGTCAGTGCATTGCTGTATT | + |
|
Preference number: 3 (lower is better) Translates to: LTCCPCLASLVG*FFPLRSVHCCI Trigger: AATACAGCAATGCACTGACCTCAAAGGGAAGAATCAGCCCACAAGTGATGCTAAGCAAGGACAGCATGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR TCA 72 bp | CAAGCCACCGACCTCTACCATTTTAATCTTGTAGGATaGACTCACCTGCTGGTAGCCTGGAATATGTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QATDLYHFNLVG*THLLVAWNMFL Trigger: AAGAAACATATTCCAGGCTACCAGCAGGTGAGTTCATCCTACAAGATTAAAATGGTAGAGGTCGGTGGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
||
| 3UTR TCA 72 bp | GCAGTCAGGTCTTTCTTCCCACGCCAAGCATTGACATaGGCAGAAGTTTTGGGATTATCACAAAATTCAACC | + |
|
Preference number: 3 (lower is better) Translates to: AVRSFFPRQALT*AEVLGLSQNST Trigger: GGTTGAATTTTGTGATAATCCCAAAACTTCTGCTCATGTCAATGCTTGGCGTGGGAAGAAAGACCTGACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
||
| 3UTR TCA 72 bp | TGGCAGCAGTCAGGTCTTTCTTCCCACGCCAAGCATTaGCATGAGCAGAAGTTTTGGGATTATCACAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: WQQSGLSSHAKH*HEQKFWDYHKI Trigger: AATTTTGTGATAATCCCAAAACTTCTGCTCATGTCAATGCTTGGCGTGGGAAGAAAGACCTGACTGCTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTACTGGATAGAATAATATGTAGACATCAGATGACACTGATGGGGTCAGTCCTTAGCTTCAGCCCTTaGACTCAACAGTTCTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: FLLDRIICRHQMTLMGSVLSFSP*TQQFSQ Trigger: CTGTGAGAACTGTTGAGTCAAAGGGCTGAAGCTAAG...GACTGACCCCATCAGTGTCATCTGATGTCTACATATTATTCTATCCAGTAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTGGTATTCATATATCCTTCTGATGATAGCACCTTGATTCTTGGCTCCATTAAATGTAAGGTAGGGTaGCTGGAAGGAGATGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLVFIYPSDDSTLILGSIKCKVG*LEGDAS Trigger: GGAGGCATCTCCTTCCAGCAACCCTACCTTACATTT...AATGGAGCCAAGAATCAAGGTGCTATCATCAGAAGGATATATGAATACCAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR TCA 72 bp | TGGAAGGAGATGCCTCCTAACTTAGCTTCAGCCCTTTaGCTCAACAGTTCTCACAGTCTAAATTATTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: WKEMPPNLASAL*LNSSHSLNYSC Trigger: GCATGAATAATTTAGACTGTGAGAACTGTTGAGTCAAAGGGCTGAAGCTAAGTTAGGAGGCATCTCCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR GCA 72 bp | ACCATTAAAGTGCAATTAACTCCAGAAGTAGAGAGATaGTGCAGGACTTTCAGAACCCAGAGTTTCTCGACA | + |
|
Preference number: 3 (lower is better) Translates to: TIKVQLTPEVER*CRTFRTQSFST Trigger: TGTCGAGAAACTCTGGGTTCTGAAAGTCCTGCAGCATCTCTCTACTTCTGGAGTTAATTGCACTTTAATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTACTGGATAGAATAATATGTAGACATCAGATGACACTGATGGGGTCAGTCTTTAACATGCTGTCCTaGCTTAGCATCACTTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FLLDRIICRHQMTLMGSVFNMLS*LSITCG Trigger: CCCACAAGTGATGCTAAGCAAGGACAGCATGTTAAA...GACTGACCCCATCAGTGTCATCTGATGTCTACATATTATTCTATCCAGTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR-3UTR CAA 90 bp | GAAGATGTCAAAGGAAAGGCTGCCAGAGACAAATCCTTCATCACTAACTTCATCGTTTGTATGAACATGTaGCATTCTTCTATCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: EDVKGKAARDKSFITNFIVCMNM*HSSICS Trigger: GGAGCAGATAGAAGAATGCAACATGTTCATACAAAC...GATGAAGTTAGTGATGAAGGATTTGTCTCTGGCAGCCTTTCCTTTGACATCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTACTGGATAGAATAATATGTAGACATCAGATGACACTGATGGGGTCAGTCGTTTGTATGAACATGTaGCATTCTTCTATCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FLLDRIICRHQMTLMGSVVCMNM*HSSICS Trigger: GGAGCAGATAGAAGAATGCAACATGTTCATACAAAC...GACTGACCCCATCAGTGTCATCTGATGTCTACATATTATTCTATCCAGTAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGCATTGACATGAGCAGAAGTTTTGGGATTATCACAAAATTCAACCATTATCTCTCACAAAGGTCCTaGTTCACAGTCTCATCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PSIDMSRSFGIITKFNHYLSQRS*FTVSSS Trigger: GGAAGATGAGACTGTGAACAAGGACCTTTGTGAGAG...ATAATGGTTGAATTTTGTGATAATCCCAAAACTTCTGCTCATGTCAATGCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
||
| 3UTR CCA 72 bp | CGTTTATTCAAAAACCCTGTTCTTTGGTACTTGGTTTaGGAAAGGTTAGTATGGATGCATTTATGTTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RLFKNPVLWYLV*ERLVWMHLCFV Trigger: CACAAAACATAAATGCATCCATACTAACCTTTCCCAAACCAAGTACCAAAGAACAGGGTTTTTGAATAAACG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
||
| 3UTR GCA 72 bp | TTGGGTGTTATGAGATTTCAATGTGACATTATTTGGTaGTGTTTGTATGAACATGTTGCATTCTTCTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGVMRFQCDIIW*CLYEHVAFFYL Trigger: CAGATAGAAGAATGCAACATGTTCATACAAACAGCACCAAATAATGTCACATTGAAATCTCATAACACCCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | GTACCTCTGGAAGAGCAGCCAGTGCTGTTAAACACTAAGCCATCTCTCCAGCTGAGGATCATTCAGTGGTaGCTTCACTTTCACCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPLEEQPVLLNTKPSLQLRIIQW*LHFHPL Trigger: CAGCGGGTGAAAGTGAAGCCACCACTGAATGATCCT...CAGCTGGAGAGATGGCTTAGTGTTTAACAGCACTGGCTGCTCTTCCAGAGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTCCTGGCTCACTGTGTGATAGGATCATTCAGTGGTaGCTTCACTTTCACCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAVCEAIGCELPGSLCDRIIQW*LHFHPL Trigger: CAGCGGGTGAAAGTGAAGCCACCACTGAATGATCCT...ATCACACAGTGAGCCAGGAAGTTCACAACCGATAGCCTCACAAACTGCCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTCCTGGCTCACTGTGTGATCAAGAAGTTTTCCCATaGCTTGTTAGCCTGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRAVCEAIGCELPGSLCDQEVFP*LVSLLS Trigger: AGAGAGCAGGCTAACAAGTCATGGGAAAACTTCTTG...ATCACACAGTGAGCCAGGAAGTTCACAACCGATAGCCTCACAAACTGCCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | ATTATTTGGTGCTGTTTGTATGAACATGTTGCATTCTTCTATCTGCTCCCCCACCGGGTAGGTGTGCTTTaGACTGTCACCACCCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: IIWCCLYEHVAFFYLLPHRVGVL*TVTTRP Trigger: GGGTCGGGTGGTGACAGTGCAAAGCACACCTACCCG...GTGGGGGAGCAGATAGAAGAATGCAACATGTTCATACAAACAGCACCAAATAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | CCCTTTGAGGTCAGTGCATTGCTGTATTTGAAGATGTCAAAGGAAAGGCTGCCATTCACTTTCACCCGCTaGAAGGCCCCTCCTCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: PFEVSALLYLKMSKERLPFTFTR*KAPPRI Trigger: TATTCGAGGAGGGGCCTTGCAGCGGGTGAAAGTGAA...TGGCAGCCTTTCCTTTGACATCTTCAAATACAGCAATGCACTGACCTCAAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTCCTGGCTCACTGTGTGATAACTGTTACCATGAATaGAGTAGGAATCCTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRAVCEAIGCELPGSLCDNCYHE*SRNPHA Trigger: GGCATGAGGATTCCTACTTCATTCATGGTAACAGTT...ATCACACAGTGAGCCAGGAAGTTCACAACCGATAGCCTCACAAACTGCCCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | GTACCTCTGGAAGAGCAGCCAGTGCTGTTAAACACTAAGCCATCTCTCCAGCTGAAGGTGGCAATCGCATaGAGTTGTAGTTCTTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: VPLEEQPVLLNTKPSLQLKVAIA*SCSSSY Trigger: GTATGAAGAACTACAACTGCATGCGATTGCCACCTT...CAGCTGGAGAGATGGCTTAGTGTTTAACAGCACTGGCTGCTCTTCCAGAGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | GTACCTCTGGAAGAGCAGCCAGTGCTGTTAAACACTAAGCCATCTCTCCAGCTGAGCAACATCCATAACTaGAATAGATGGGCAGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPLEEQPVLLNTKPSLQLSNIHN*NRWAVS Trigger: GCTAACTGCCCATCTATTGCAGTTATGGATGTTGCT...CAGCTGGAGAGATGGCTTAGTGTTTAACAGCACTGGCTGCTCTTCCAGAGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | ATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACACCGGGTAGGTGTGCTTTaGACTGTCACCACCCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: IHLAKTLQVKFISGAVEHRVGVL*TVTTRP Trigger: GGGTCGGGTGGTGACAGTGCAAAGCACACCTACCCG...GTGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000155048.2 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | ATAGGAAATAGAAAGAAAAGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTGAGCACAGATTCCGCTaGCTGCTTGGGCTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: IGNRKKSRAVCEAIGCELEHRFR*LLGLSP Trigger: TGGTGAAAGCCCAAGCAGCCAGCGGAATCTGTGCTC...AAGTTCACAACCGATAGCCTCACAAACTGCCCTGCTTTTCTTTCTATTTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR CAA 72 bp | TTTGTCTCTGGTAACTCACAGAAGAGTAGACTGTCATaGCTCAGGCAGGGCAACCTAGACACCATATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FVSGNSQKSRLS*LRQGNLDTIST Trigger: AGTGGATATGGTGTCTAGGTTGCCCTGCCTGAGCAATGACAGTCTACTCTTCTGTGAGTTACCAGAGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | TTTCAGAACCCAGAGTTTCTCGACAAGCTGATTCTCAAGCAGGAGTGCCGACTGAAGTTGTTTTTCTTCTaGGACATCCTTATCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQNPEFLDKLILKQECRLKLFFF*DILILL Trigger: GAGGAGGATAAGGATGTCTCAGAAGAAAAACAACTT...CAGTCGGCACTCCTGCTTGAGAATCAGCTTGTCGAGAAACTCTGGGTTCTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
||
| CDS-3UTR GCA 90 bp | TATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACACGGGTAGGTGTGCTTTaGACTGTCACCACCCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: YTFSKDVAGKIYFRSCGTRVGVL*TVTTRP Trigger: GGGTCGGGTGGTGACAGTGCAAAGCACACCTACCCG...TGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000155048.2 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | ATAGGAAATAGAAAGAAAAGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTTTCACTTTCACCCGCTaGAAGGCCCCTCCTCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: IGNRKKSRAVCEAIGCELFTFTR*KAPPRI Trigger: TATTCGAGGAGGGGCCTTGCAGCGGGTGAAAGTGAA...AAGTTCACAACCGATAGCCTCACAAACTGCCCTGCTTTTCTTTCTATTTCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | GAAGATGTCAAAGGAAAGGCTGCCAGAGACAAATCCTTCATCACTAACTTCATCCCACAGAGGACAAGGTaGCAATCGCATGCAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EDVKGKAARDKSFITNFIPQRTR*QSHAVV Trigger: TACAACTGCATGCGATTGCCACCTTGTCCTCTGTGG...GATGAAGTTAGTGATGAAGGATTTGTCTCTGGCAGCCTTTCCTTTGACATCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | TTGGGAAAGGTTAGTATGGATGCATTTATGTTTTGTGTTAGAGTACTAACTCGGGAGCACAGATTCCGCTaGCTGCTTGGGCTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGKVSMDAFMFCVRVLTREHRFR*LLGLSP Trigger: TGGTGAAAGCCCAAGCAGCCAGCGGAATCTGTGCTC...CCGAGTTAGTACTCTAACACAAAACATAAATGCATCCATACTAACCTTTCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
||
| CDS-3UTR CCA 90 bp | TTCCTACTGGATAGAATAATATGTAGACATCAGATGACACTGATGGGGTCAGTCCCACAGAGGACAAGGTaGCAATCGCATGCAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLLDRIICRHQMTLMGSVPQRTR*QSHAVV Trigger: TACAACTGCATGCGATTGCCACCTTGTCCTCTGTGG...GACTGACCCCATCAGTGTCATCTGATGTCTACATATTATTCTATCCAGTAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | GAAGATGTCAAAGGAAAGGCTGCCAGAGACAAATCCTTCATCACTAACTTCATCCATAACTGCAATAGATaGGCAGTTAGCAGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EDVKGKAARDKSFITNFIHNCNR*AVSRKG Trigger: CCCCTTCCTGCTAACTGCCCATCTATTGCAGTTATG...GATGAAGTTAGTGATGAAGGATTTGTCTCTGGCAGCCTTTCCTTTGACATCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTCCTGGCTCACTGTGTGATCCTTTAATAACTGTTTaGTGGAATGTTGCATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRAVCEAIGCELPGSLCDPLITV*WNVAFC Trigger: ACAGAATGCAACATTCCACCAAACAGTTATTAAAGG...ATCACACAGTGAGCCAGGAAGTTCACAACCGATAGCCTCACAAACTGCCCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR CAA 72 bp | TGCCCACACCACTCCAGAAATGCAAGGATCCGAGAATaGCCGTGGCATGACATATACTCTTCTATTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: CPHHSRNARIRE*PWHDIYSSINK Trigger: TTTGTTAATAGAAGAGTATATGTCATGCCACGGCAATTCTCGGATCCTTGCATTTCTGGAGTGGTGTGGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
||
| CDS-3UTR TCA 90 bp | GAAGATGTCAAAGGAAAGGCTGCCAGAGACAAATCCTTCATCACTAACTTCATCCAAGAAGTTTTCCCATaGCTTGTTAGCCTGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EDVKGKAARDKSFITNFIQEVFP*LVSLLS Trigger: AGAGAGCAGGCTAACAAGTCATGGGAAAACTTCTTG...GATGAAGTTAGTGATGAAGGATTTGTCTCTGGCAGCCTTTCCTTTGACATCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | TTCCTACTGGATAGAATAATATGTAGACATCAGATGACACTGATGGGGTCAGTCGAAGTAGAGAGATGCTaGAGGACTTTCAGAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLDRIICRHQMTLMGSVEVERC*RTFRTQ Trigger: CTGGGTTCTGAAAGTCCTGCAGCATCTCTCTACTTC...GACTGACCCCATCAGTGTCATCTGATGTCTACATATTATTCTATCCAGTAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | ATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACACTTCACTTTCACCCGCTaGAAGGCCCCTCCTCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: IHLAKTLQVKFISGAVEHFTFTR*KAPPRI Trigger: TATTCGAGGAGGGGCCTTGCAGCGGGTGAAAGTGAA...GTGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000155048.2 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | TTCCTACTGGATAGAATAATATGTAGACATCAGATGACACTGATGGGGTCAGTCATTCCGCTGGCTGCTTaGGCTTTCACCATTAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLLDRIICRHQMTLMGSVIPLAA*AFTIKV Trigger: CACTTTAATGGTGAAAGCCCAAGCAGCCAGCGGAAT...GACTGACCCCATCAGTGTCATCTGATGTCTACATATTATTCTATCCAGTAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGGCACGTTTATTCAAAAACCCTGTTCTTTGGTACTTGGTTTGGGAAACCACAGAGGACAAGGTaGCAATCGCATGCAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLRHVYSKTLFFGTWFGKPQRTR*QSHAVV Trigger: TACAACTGCATGCGATTGCCACCTTGTCCTCTGTGG...TTTCCCAAACCAAGTACCAAAGAACAGGGTTTTTGAATAAACGTGCCTCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
||
| 3UTR CAA 72 bp | ATTGCTCAGGCAGGGCAACCTAGACACCATATCCACTaGGATTCAAGAGAAGCAGTTATAGGAAATAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IAQAGQPRHHIH*DSREAVIGNRK Trigger: CTTTCTATTTCCTATAACTGCTTCTCTTGAATCCAAGTGGATATGGTGTCTAGGTTGCCCTGCCTGAGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | GCACGTTTATTCAAAAACCCTGTTCTTTGGTACTTGGTTTGGGAAAGGTTAGTAGGTGCTCCAGGGTTCTaGGCTATAATTGTGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: ARLFKNPVLWYLVWERLVGAPGF*AIIVVI Trigger: TATCACCACAATTATAGCTCAGAACCCTGGAGCACC...TACTAACCTTTCCCAAACCAAGTACCAAAGAACAGGGTTTTTGAATAAACGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
||
| CDS-3UTR GCA 90 bp | CCCTTTGAGGTCAGTGCATTGCTGTATTTGAAGATGTCAAAGGAAAGGCTGCCATTTTATGATGTCAGATaGAGGTTCTACAAAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PFEVSALLYLKMSKERLPFYDVR*RFYKTG Trigger: CCCTGTTTTGTAGAACCTGCATCTGACATCATAAAA...TGGCAGCCTTTCCTTTGACATCTTCAAATACAGCAATGCACTGACCTCAAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | GAAGATGTCAAAGGAAAGGCTGCCAGAGACAAATCCTTCATCACTAACTTCATCAAGGTGGCAATCGCATaGAGTTGTAGTTCTTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: EDVKGKAARDKSFITNFIKVAIA*SCSSSY Trigger: GTATGAAGAACTACAACTGCATGCGATTGCCACCTT...GATGAAGTTAGTGATGAAGGATTTGTCTCTGGCAGCCTTTCCTTTGACATCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | GAAGATGTCAAAGGAAAGGCTGCCAGAGACAAATCCTTCATCACTAACTTCATCTGTTTGGTGGAATGTTaGATTCTGTGGTCGTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EDVKGKAARDKSFITNFICLVEC*ILWSFS Trigger: ACTGAACGACCACAGAATGCAACATTCCACCAAACA...GATGAAGTTAGTGATGAAGGATTTGTCTCTGGCAGCCTTTCCTTTGACATCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | TATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACATTCACTTTCACCCGCTaGAAGGCCCCTCCTCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: YTFSKDVAGKIYFRSCGTFTFTR*KAPPRI Trigger: TATTCGAGGAGGGGCCTTGCAGCGGGTGAAAGTGAA...TGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000155048.2 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGTATTCATATATCCTTCTGATGATAGCACCTTGATTCTTGGCTCCATTATTCCGCTGGCTGCTTaGGCTTTCACCATTAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVFIYPSDDSTLILGSIIPLAA*AFTIKV Trigger: CACTTTAATGGTGAAAGCCCAAGCAGCCAGCGGAAT...AATGGAGCCAAGAATCAAGGTGCTATCATCAGAAGGATATATGAATACCAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | ATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACACAGGATCATTCAGTGGTaGCTTCACTTTCACCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IHLAKTLQVKFISGAVEHRIIQW*LHFHPL Trigger: CAGCGGGTGAAAGTGAAGCCACCACTGAATGATCCT...GTGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000155048.2 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | TTGCTTCTGGTATTCATATATCCTTCTGATGATAGCACCTTGATTCTTGGCTCCAACTGTTACCATGAATaGAGTAGGAATCCTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLVFIYPSDDSTLILGSNCYHE*SRNPHA Trigger: GGCATGAGGATTCCTACTTCATTCATGGTAACAGTT...GGAGCCAAGAATCAAGGTGCTATCATCAGAAGGATATATGAATACCAGAAGCAA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | TGCAATAGATGGGCAGTTAGCAGGAAGGGGCATGGTCTTTTGTTCTTCTTGAAAACCCACATAATTTTATaGTGTCAGATGCAGGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CNRWAVSRKGHGLLFFLKTHIIL*CQMQVL Trigger: TAGAACCTGCATCTGACATCATAAAATTATGTGGGT...TTTCAAGAAGAACAAAAGACCATGCCCCTTCCTGCTAACTGCCCATCTATTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTACTGGATAGAATAATATGTAGACATCAGATGACACTGATGGGGTCAGTCAGCAACATCCATAACTaGAATAGATGGGCAGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLLDRIICRHQMTLMGSVSNIHN*NRWAVS Trigger: GCTAACTGCCCATCTATTGCAGTTATGGATGTTGCT...GACTGACCCCATCAGTGTCATCTGATGTCTACATATTATTCTATCCAGTAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | TTGCTTCTGGTATTCATATATCCTTCTGATGATAGCACCTTGATTCTTGGCTCCTGTTTGGTGGAATGTTaGATTCTGTGGTCGTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLVFIYPSDDSTLILGSCLVEC*ILWSFS Trigger: ACTGAACGACCACAGAATGCAACATTCCACCAAACA...GGAGCCAAGAATCAAGGTGCTATCATCAGAAGGATATATGAATACCAGAAGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | ATAGGAAATAGAAAGAAAAGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTAGTAATGTGTCAGACTaGATTTCTAAGGCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGNRKKSRAVCEAIGCELSNVSD*ISKAMA Trigger: GGCCATTGCCTTAGAAATCCAGTCTGACACATTACT...AAGTTCACAACCGATAGCCTCACAAACTGCCCTGCTTTTCTTTCTATTTCCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054865.13 |
||
| CDS-3UTR CCA 90 bp | TATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACAAGGATCATTCAGTGGTaGCTTCACTTTCACCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTFSKDVAGKIYFRSCGTRIIQW*LHFHPL Trigger: CAGCGGGTGAAAGTGAAGCCACCACTGAATGATCCT...TGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000155048.2 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | ATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCTGCCTTGGTGCTCCAGGGTTCTaGGCTATAATTGTGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: IVSALSSVVNICEKITCLGAPGF*AIIVVI Trigger: TATCACCACAATTATAGCTCAGAACCCTGGAGCACC...AAGGCAGGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | TATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACAGGTGCTCCAGGGTTCTaGGCTATAATTGTGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: YTFSKDVAGKIYFRSCGTGAPGF*AIIVVI Trigger: TATCACCACAATTATAGCTCAGAACCCTGGAGCACC...TGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | GCACGTTTATTCAAAAACCCTGTTCTTTGGTACTTGGTTTGGGAAAGGTTAGTAAACTGTTACCATGAATaGAGTAGGAATCCTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARLFKNPVLWYLVWERLVNCYHE*SRNPHA Trigger: GGCATGAGGATTCCTACTTCATTCATGGTAACAGTT...TACTAACCTTTCCCAAACCAAGTACCAAAGAACAGGGTTTTTGAATAAACGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
||
| CDS-3UTR TCA 90 bp | TTCCTACTGGATAGAATAATATGTAGACATCAGATGACACTGATGGGGTCAGTCGTATTATACAGAGGGTaGCAAAATCTTCGGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: FLLDRIICRHQMTLMGSVVLYRG*QNLRQI Trigger: TATCTGCCGAAGATTTTGTCACCCTCTGTATAATAC...GACTGACCCCATCAGTGTCATCTGATGTCTACATATTATTCTATCCAGTAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGGCACGTTTATTCAAAAACCCTGTTCTTTGGTACTTGGTTTGGGAAAAAGGTGGCAATCGCATaGAGTTGTAGTTCTTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: SLRHVYSKTLFFGTWFGKKVAIA*SCSSSY Trigger: GTATGAAGAACTACAACTGCATGCGATTGCCACCTT...TTTCCCAAACCAAGTACCAAAGAACAGGGTTTTTGAATAAACGTGCCTCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
||
| CDS-3UTR GCA 90 bp | ATAGGAAATAGAAAGAAAAGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTCATAACATCCCAAAATaGAGCACCAAATGCTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IGNRKKSRAVCEAIGCELHNIPK*STKCCL Trigger: TAGACAGCATTTGGTGCTGCATTTTGGGATGTTATG...AAGTTCACAACCGATAGCCTCACAAACTGCCCTGCTTTTCTTTCTATTTCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054865.13 |
||
| CDS-3UTR CCA 90 bp | TTTATTCAAAAACCCTGTTCTTTGGTACTTGGTTTGGGAAAGGTTAGTATGGATATTCCGCTGGCTGCTTaGGCTTTCACCATTAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FIQKPCSLVLGLGKVSMDIPLAA*AFTIKV Trigger: CACTTTAATGGTGAAAGCCCAAGCAGCCAGCGGAAT...ATCCATACTAACCTTTCCCAAACCAAGTACCAAAGAACAGGGTTTTTGAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
||
| CDS-3UTR CCA 90 bp | CTGTGTATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCCATAACTGCAATAGATaGGCAGTTAGCAGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCIVSALSSVVNICEKITHNCNR*AVSRKG Trigger: CCCCTTCCTGCTAACTGCCCATCTATTGCAGTTATG...GGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTATACACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| 3UTR CAA 72 bp | AATGTGACATTATTTGGTGCTGTTTGTATGAACATGTaGCATTCTTCTATCTGCTCCCCCACACACTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NVTLFGAVCMNM*HSSICSPTHYL Trigger: CAAGTAGTGTGTGGGGGAGCAGATAGAAGAATGCAACATGTTCATACAAACAGCACCAAATAATGTCACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | CTGTGTATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCTCATTCTGCACATCCTaGAGGGCTTGGTTTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LCIVSALSSVVNICEKITSFCTS*RAWFSI Trigger: GATTGAAAACCAAGCCCTTCAGGATGTGCAGAATGA...GGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTATACACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | TATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACACAAGAAGTTTTCCCATaGCTTGTTAGCCTGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTFSKDVAGKIYFRSCGTQEVFP*LVSLLS Trigger: AGAGAGCAGGCTAACAAGTCATGGGAAAACTTCTTG...TGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTTCTTTGGTACTTGGTTTGGGAAAGGTTAGTATGGATGCATTTATGTTTTAGTAATGTGTCAGACTaGATTTCTAAGGCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVLWYLVWERLVWMHLCFSNVSD*ISKAMA Trigger: GGCCATTGCCTTAGAAATCCAGTCTGACACATTACT...AAAACATAAATGCATCCATACTAACCTTTCCCAAACCAAGTACCAAAGAACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
||
| 3UTR CAA 72 bp | AAACTAGTAAATAGAGGTCTCTTTGTATCAACAATCTaGCCGTTCCTGTCACGTTTTACTCCTAGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLVNRGLFVSTI*PFLSRFTPSSF Trigger: AAAGGAGCTAGGAGTAAAACGTGACAGGAACGGCAAGATTGTTGATACAAAGAGACCTCTATTTACTAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
||
| CDS-3UTR TCA 90 bp | ATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACACGTATTATACAGAGGGTaGCAAAATCTTCGGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: IHLAKTLQVKFISGAVEHVLYRG*QNLRQI Trigger: TATCTGCCGAAGATTTTGTCACCCTCTGTATAATAC...GTGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | ATTCTTGGGGTCTGTTTTCATTACATGAAGAACTATGTCAACTCCTTCAGTACCTTTTATGATGTCAGATaGAGGTTCTACAAAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILGVCFHYMKNYVNSFSTFYDVR*RFYKTG Trigger: CCCTGTTTTGTAGAACCTGCATCTGACATCATAAAA...GGTACTGAAGGAGTTGACATAGTTCTTCATGTAATGAAAACAGACCCCAAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGAAAGGTTAGTATGGATGCATTTATGTTTTGTGTTAGAGTACTAACTCGGCATAACATCCCAAAATaGAGCACCAAATGCTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGKVSMDAFMFCVRVLTRHNIPK*STKCCL Trigger: TAGACAGCATTTGGTGCTGCATTTTGGGATGTTATG...CCGAGTTAGTACTCTAACACAAAACATAAATGCATCCATACTAACCTTTCCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
||
| CDS-3UTR GCA 90 bp | TATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACATGTTTGGTGGAATGTTaGATTCTGTGGTCGTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YTFSKDVAGKIYFRSCGTCLVEC*ILWSFS Trigger: ACTGAACGACCACAGAATGCAACATTCCACCAAACA...TGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000196165.5 |
||
| 3UTR CAA 72 bp | GTTATGAGATTTCAATGTGACATTATTTGGTGCTGTTaGTATGAACATGTTGCATTCTTCTATCTGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VMRFQCDIIWCC*YEHVAFFYLLP Trigger: GGGGAGCAGATAGAAGAATGCAACATGTTCATACAAACAGCACCAAATAATGTCACATTGAAATCTCATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | CTGTGTATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCAAGTTGTTTTTCTTCTaGGACATCCTTATCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCIVSALSSVVNICEKITKLFFF*DILILL Trigger: GAGGAGGATAAGGATGTCTCAGAAGAAAAACAACTT...GGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTATACACAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | CTTGGTTTGGGAAAGGTTAGTATGGATGCATTTATGTTTTGTGTTAGAGTACTAAAGTTGTTTTTCTTCTaGGACATCCTTATCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLGKVSMDAFMFCVRVLKLFFF*DILILL Trigger: GAGGAGGATAAGGATGTCTCAGAAGAAAAACAACTT...TAGTACTCTAACACAAAACATAAATGCATCCATACTAACCTTTCCCAAACCAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
||
| CDS-3UTR TCA 90 bp | TATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACAAAGTTGTTTTTCTTCTaGGACATCCTTATCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YTFSKDVAGKIYFRSCGTKLFFF*DILILL Trigger: GAGGAGGATAAGGATGTCTCAGAAGAAAAACAACTT...TGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | TATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACAGTATTATACAGAGGGTaGCAAAATCTTCGGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: YTFSKDVAGKIYFRSCGTVLYRG*QNLRQI Trigger: TATCTGCCGAAGATTTTGTCACCCTCTGTATAATAC...TGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | ACGTTTATTCAAAAACCCTGTTCTTTGGTACTTGGTTTGGGAAAGGTTAGTATGTTTTATGATGTCAGATaGAGGTTCTACAAAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFIQKPCSLVLGLGKVSMFYDVR*RFYKTG Trigger: CCCTGTTTTGTAGAACCTGCATCTGACATCATAAAA...CATACTAACCTTTCCCAAACCAAGTACCAAAGAACAGGGTTTTTGAATAAACGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
||
| CDS-3UTR GCA 90 bp | TATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACATCAATCATCTCACTTTaGAAGGACGCAACCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YTFSKDVAGKIYFRSCGTSIISL*KDATIF Trigger: AAAGATGGTTGCGTCCTTGCAAAGTGAGATGATTGA...TGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | ATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCTGCCTTTCAATCATCTCACTTTaGAAGGACGCAACCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IVSALSSVVNICEKITCLSIISL*KDATIF Trigger: AAAGATGGTTGCGTCCTTGCAAAGTGAGATGATTGA...AAGGCAGGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR TCA 90 bp | TATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACAAGCCACATAATTTTATaGTGTCAGATGCAGGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YTFSKDVAGKIYFRSCGTSHIIL*CQMQVL Trigger: TAGAACCTGCATCTGACATCATAAAATTATGTGGCT...TGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR GCA 90 bp | CTGTGTATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCTTTTATGATGTCAGATaGAGGTTCTACAAAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCIVSALSSVVNICEKITFYDVR*RFYKTG Trigger: CCCTGTTTTGTAGAACCTGCATCTGACATCATAAAA...GGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTATACACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | ATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACACTTAATAACTGTTTGGTaGAATGTTGCATTCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IHLAKTLQVKFISGAVEHLITVW*NVAFCG Trigger: ACCACAGAATGCAACATTCCACCAAACAGTTATTAA...GTGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | ATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACACCCTTTAATAACTGTTTaGTGGAATGTTGCATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IHLAKTLQVKFISGAVEHPLITV*WNVAFC Trigger: ACAGAATGCAACATTCCACCAAACAGTTATTAAAGG...GTGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | TATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACATTAATAACTGTTTGGTaGAATGTTGCATTCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YTFSKDVAGKIYFRSCGTLITVW*NVAFCG Trigger: ACCACAGAATGCAACATTCCACCAAACAGTTATTAA...TGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTATA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000196165.5 |
||
| CDS-3UTR CCA 90 bp | TATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACACCTTTAATAACTGTTTaGTGGAATGTTGCATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YTFSKDVAGKIYFRSCGTPLITV*WNVAFC Trigger: ACAGAATGCAACATTCCACCAAACAGTTATTAAAGG...TGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTATA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000196165.5 |
||
| CDS GCA 90 bp | CCACCCCAAACACCGGGATTGTGCGGGGACTGCCGGTCTTCGTCCTaGCGCCCGCCTCGGCGGCGTCGGCCGTGGTGGCCGAGGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPQTPGLCGDCRSSS*RPPRRRRPWWPRPP Trigger: CGGAGGCCTCGGCCACCACGGCCGACGCCGCCGAGGCGGGCGGCAGGACGAAGACCGGCAGTCCCCGCACAATCCCGGTGTTTGGGGTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054865.13 ENSMUST00000061008.10 ENSMUST00000132510.8 ENSMUST00000135252.3 ENSMUST00000196165.5 |
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| CDS GCA 90 bp | TCTGTGTCAGCCAGAGGTCCTCCCAGTAGCCGGGTAGGTGTGCTTTaGACTGTCACCACCCGACCCGAAGGCACCGTTGTGTTAAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: SVSARGPPSSRVGVL*TVTTRPEGTVVLRP Trigger: AGGTCTTAACACAACGGTGCCTTCGGGTCGGGTGGTGACAGTGCAAAGCACACCTACCCGGCTACTGGGAGGACCTCTGGCTGACACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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| CDS GCA 90 bp | TCTGTGTCAGCCAGAGGTCCTCCCAGTAGCCGGGTAGGTGTGCTTTaGACTGTCACCACCCGACCCGAAGGCACCTTTAATGTTTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVSARGPPSSRVGVL*TVTTRPEGTFNVLA Trigger: TGCTAAAACATTAAAGGTGCCTTCGGGTCGGGTGGTGACAGTGCAAAGCACACCTACCCGGCTACTGGGAGGACCTCTGGCTGACACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155048.2 |
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| CDS-3UTR CAA 90 bp | AGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTCCTGGCTCACTGTGTGATTTAAGGTCCATAGGCTaGAAAATACCCTGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRAVCEAIGCELPGSLCDLRSIG*KIPCIS Trigger: GGAGATGCAGGGTATTTTCAAGCCTATGGACCTTAA...ATCACACAGTGAGCCAGGAAGTTCACAACCGATAGCCTCACAAACTGCCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| CDS-3UTR CAA 90 bp | CCTGTTCTTTGGTACTTGGTTTGGGAAAGGTTAGTATGGATGCATTTATGTTTTCGCATCTGGGCGAACTaGTTTCCACGGCCGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PVLWYLVWERLVWMHLCFRIWAN*FPRPPV Trigger: TACAGGCGGCCGTGGAAACAAGTTCGCCCAGATGCG...AAAACATAAATGCATCCATACTAACCTTTCCCAAACCAAGTACCAAAGAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
||
| CDS-3UTR CAA 90 bp | ATACATTTAGCAAAGACGTTGCAGGTAAAATTTATTTCAGGAGCTGTGGAACACCGCATCTGGGCGAACTaGTTTCCACGGCCGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IHLAKTLQVKFISGAVEHRIWAN*FPRPPV Trigger: TACAGGCGGCCGTGGAAACAAGTTCGCCCAGATGCG...GTGTTCCACAGCTCCTGAAATAAATTTTACCTGCAACGTCTTTGCTAAATGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CAA 90 bp | GTACCTCTGGAAGAGCAGCCAGTGCTGTTAAACACTAAGCCATCTCTCCAGCTGCTTTGTATCTATCAGTaGATGAATAACCCCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VPLEEQPVLLNTKPSLQLLCIYQ*MNNPSL Trigger: GAGAGAGGGGTTATTCATCAACTGATAGATACAAAG...CAGCTGGAGAGATGGCTTAGTGTTTAACAGCACTGGCTGCTCTTCCAGAGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196165.5 |
||
| CDS CCA 90 bp | ACCCGACCCGAAGGCACCGTTGTGTTAAGACCTTTAATAACTGTTTaGTGGAATGTTGCATTCTGTGGTCGTTCAGTATATCTGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TRPEGTVVLRPLITV*WNVAFCGRSVYLED Trigger: ATCCTCCAGATATACTGAACGACCACAGAATGCAACATTCCACCAAACAGTTATTAAAGGTCTTAACACAACGGTGCCTTCGGGTCGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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| CDS-3UTR CAA 90 bp | ATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCTGCCTTCGCATCTGGGCGAACTaGTTTCCACGGCCGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IVSALSSVVNICEKITCLRIWAN*FPRPPV Trigger: TACAGGCGGCCGTGGAAACAAGTTCGCCCAGATGCG...AAGGCAGGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CAA 90 bp | GTACCTCTGGAAGAGCAGCCAGTGCTGTTAAACACTAAGCCATCTCTCCAGCTGCTGCTTATGTGTAGCTaGTATTTTTGCATACACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPLEEQPVLLNTKPSLQLLLMCS*YFCIHS Trigger: AGAGTGTATGCAAAAATACAAGCTACACATAAGCAG...CAGCTGGAGAGATGGCTTAGTGTTTAACAGCACTGGCTGCTCTTCCAGAGGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS CCA 90 bp | CGACCCGAAGGCACCGTTGTGTTAAGACCTTTAATAACTGTTTGGTaGAATGTTGCATTCTGTGGTCGTTCAGTATATCTGGAGGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: RPEGTVVLRPLITVW*NVAFCGRSVYLEDS Trigger: AGAATCCTCCAGATATACTGAACGACCACAGAATGCAACATTCCACCAAACAGTTATTAAAGGTCTTAACACAACGGTGCCTTCGGGTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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| CDS-3UTR CAA 90 bp | GAAGATGTCAAAGGAAAGGCTGCCAGAGACAAATCCTTCATCACTAACTTCATCCTCTCACAAAGGTCCTaGTTCACAGTCTCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EDVKGKAARDKSFITNFILSQRS*FTVSSS Trigger: GGAAGATGAGACTGTGAACAAGGACCTTTGTGAGAG...GATGAAGTTAGTGATGAAGGATTTGTCTCTGGCAGCCTTTCCTTTGACATCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CAA 90 bp | ATAGGAAATAGAAAGAAAAGCAGGGCAGTTTGTGAGGCTATCGGTTGTGAACTTGACCACTCCATGATCTaGAGTCTCTCAGGCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IGNRKKSRAVCEAIGCELDHSMI*SLSGFF Trigger: GAAAAAGCCTGAGAGACTCAAGATCATGGAGTGGTC...AAGTTCACAACCGATAGCCTCACAAACTGCCCTGCTTTTCTTTCTATTTCCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| CDS-3UTR CAA 90 bp | GAAGATGTCAAAGGAAAGGCTGCCAGAGACAAATCCTTCATCACTAACTTCATCCACATCCTGAAGGGCTaGGTTTTCAATCATCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: EDVKGKAARDKSFITNFIHILKG*VFNHLT Trigger: AGTGAGATGATTGAAAACCAAGCCCTTCAGGATGTG...GATGAAGTTAGTGATGAAGGATTTGTCTCTGGCAGCCTTTCCTTTGACATCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| CDS TCA 90 bp | GTAGCTTGTATTTTTGCATACACTCTTTGTTCATTCTGCACATCCTaGAGGGCTTGGTTTTCAATCATCTCACTTTGCAAGGACGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: VACIFAYTLCSFCTS*RAWFSIISLCKDAT Trigger: GGTTGCGTCCTTGCAAAGTGAGATGATTGAAAACCAAGCCCTTCAGGATGTGCAGAATGAACAAAGAGTGTATGCAAAAATACAAGCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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| CDS-3UTR CAA 90 bp | TGGAGACAGGACACTGGGCCTATGTGTAAAACTGATACTCAACTGAATCATCAATCCTCTTCAAGGACTTaGATGATACGATTAAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WRQDTGPMCKTDTQLNHQSSSRT*MIRLRS Trigger: GGACCTTAATCGTATCATCAAAGTCCTTGAAGAGGA...TTGATGATTCAGTTGAGTATCAGTTTTACACATAGGCCCAGTGTCCTGTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
||
| CDS-3UTR CAA 90 bp | GCACGTTTATTCAAAAACCCTGTTCTTTGGTACTTGGTTTGGGAAAGGTTAGTACTCTCACAAAGGTCCTaGTTCACAGTCTCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARLFKNPVLWYLVWERLVLSQRS*FTVSSS Trigger: GGAAGATGAGACTGTGAACAAGGACCTTTGTGAGAG...TACTAACCTTTCCCAAACCAAGTACCAAAGAACAGGGTTTTTGAATAAACGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
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| CDS GCA 90 bp | GTCCTAGCCAAGAAGTTTTCCCATGACTTGTTAGCCTGCTCTCTCTaGTTATGTGTAGCTTGTATTTTTGCATACACTCTTTGTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VLAKKFSHDLLACSL*LCVACIFAYTLCSF Trigger: GAATGAACAAAGAGTGTATGCAAAAATACAAGCTACACATAAGCAGAGAGAGCAGGCTAACAAGTCATGGGAAAACTTCTTGGCTAGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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| CDS GCA 90 bp | GCATTTGATGTCCTAGCCAAGAAGTTTTCCCATGACTTGTTAGCCTaGTCTCTCTGCTTATGTGTAGCTTGTATTTTTGCATACACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AFDVLAKKFSHDLLA*SLCLCVACIFAYTL Trigger: AAGAGTGTATGCAAAAATACAAGCTACACATAAGCAGAGAGAGCAGGCTAACAAGTCATGGGAAAACTTCTTGGCTAGGACATCAAATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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| CDS-3UTR CAA 90 bp | CTTCTGGTATTCATATATCCTTCTGATGATAGCACCTTGATTCTTGGCTCCATTTTAAGGTCCATAGGCTaGAAAATACCCTGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLVFIYPSDDSTLILGSILRSIG*KIPCIS Trigger: GGAGATGCAGGGTATTTTCAAGCCTATGGACCTTAA...AATGGAGCCAAGAATCAAGGTGCTATCATCAGAAGGATATATGAATACCAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| CDS-3UTR CAA 90 bp | ACGTTTATTCAAAAACCCTGTTCTTTGGTACTTGGTTTGGGAAAGGTTAGTATGGACCACTCCATGATCTaGAGTCTCTCAGGCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TFIQKPCSLVLGLGKVSMDHSMI*SLSGFF Trigger: GAAAAAGCCTGAGAGACTCAAGATCATGGAGTGGTC...CATACTAACCTTTCCCAAACCAAGTACCAAAGAACAGGGTTTTTGAATAAACGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
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| CDS-3UTR CAA 90 bp | ACGTTTATTCAAAAACCCTGTTCTTTGGTACTTGGTTTGGGAAAGGTTAGTATGTTAAGGTCCATAGGCTaGAAAATACCCTGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TFIQKPCSLVLGLGKVSMLRSIG*KIPCIS Trigger: GGAGATGCAGGGTATTTTCAAGCCTATGGACCTTAA...CATACTAACCTTTCCCAAACCAAGTACCAAAGAACAGGGTTTTTGAATAAACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135252.3 |
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| CDS-3UTR CAA 90 bp | ATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCTGCCTTGACCACTCCATGATCTaGAGTCTCTCAGGCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IVSALSSVVNICEKITCLDHSMI*SLSGFF Trigger: GAAAAAGCCTGAGAGACTCAAGATCATGGAGTGGTC...AAGGCAGGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| CDS-3UTR CAA 90 bp | CTTCTGGTATTCATATATCCTTCTGATGATAGCACCTTGATTCTTGGCTCCATTTTCAATCATCTCACTTaGCAAGGACGCAACCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLVFIYPSDDSTLILGSIFNHLT*QGRNHL Trigger: AAGATGGTTGCGTCCTTGCAAAGTGAGATGATTGAA...AATGGAGCCAAGAATCAAGGTGCTATCATCAGAAGGATATATGAATACCAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| CDS-3UTR CAA 90 bp | TGGAGACAGGACACTGGGCCTATGTGTAAAACTGATACTCAACTGAATCATCAACTGCTTATGTGTAGCTaGTATTTTTGCATACACTCT | + |
|
Preference number: 5 (lower is better) Translates to: WRQDTGPMCKTDTQLNHQLLMCS*YFCIHS Trigger: AGAGTGTATGCAAAAATACAAGCTACACATAAGCAG...TTGATGATTCAGTTGAGTATCAGTTTTACACATAGGCCCAGTGTCCTGTCTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| CDS-3UTR CAA 90 bp | CCAAGCATTGACATGAGCAGAAGTTTTGGGATTATCACAAAATTCAACCATTATTTAAGGTCCATAGGCTaGAAAATACCCTGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSIDMSRSFGIITKFNHYLRSIG*KIPCIS Trigger: GGAGATGCAGGGTATTTTCAAGCCTATGGACCTTAA...ATAATGGTTGAATTTTGTGATAATCCCAAAACTTCTGCTCATGTCAATGCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132510.8 |
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| CDS-3UTR CAA 90 bp | ATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCTGCCTTCACATCCTGAAGGGCTaGGTTTTCAATCATCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: IVSALSSVVNICEKITCLHILKG*VFNHLT Trigger: AGTGAGATGATTGAAAACCAAGCCCTTCAGGATGTG...AAGGCAGGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| CDS CCA 90 bp | TGTGTTAAGACCTTTAATAACTGTTTGGTGGAATGTTGCATTCTGTaGTCGTTCAGTATATCTGGAGGATTCTATAGCCTTTTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CVKTFNNCLVECCIL*SFSISGGFYSLFLK Trigger: CTTCAAGAAAAGGCTATAGAATCCTCCAGATATACTGAACGACCACAGAATGCAACATTCCACCAAACAGTTATTAAAGGTCTTAACACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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| CDS-3UTR CAA 90 bp | CTGTGTATAGTTTCTGCATTAAGCAGCGTAGTAAATATCTGTGAGAAAATTACCTTCAATCATCTCACTTaGCAAGGACGCAACCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCIVSALSSVVNICEKITFNHLT*QGRNHL Trigger: AAGATGGTTGCGTCCTTGCAAAGTGAGATGATTGAA...GGTAATTTTCTCACAGATATTTACTACGCTGCTTAATGCAGAAACTATACACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054865.13 ENSMUST00000196165.5 |
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| CDS GCA 72 bp | ACACCGGGATTGTGCGGGGACTGCCGGTCTTCGTCCTaGCGCCCGCCTCGGCGGCGTCGGCCGTGGTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TPGLCGDCRSSS*RPPRRRRPWWP Trigger: CGGCCACCACGGCCGACGCCGCCGAGGCGGGCGGCAGGACGAAGACCGGCAGTCCCCGCACAATCCCGGTGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054865.13 ENSMUST00000061008.10 ENSMUST00000132510.8 ENSMUST00000135252.3 ENSMUST00000196165.5 |
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| CDS GCA 72 bp | GCCAGAGGTCCTCCCAGTAGCCGGGTAGGTGTGCTTTaGACTGTCACCACCCGACCCGAAGGCACCGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ARGPPSSRVGVL*TVTTRPEGTVV Trigger: CACAACGGTGCCTTCGGGTCGGGTGGTGACAGTGCAAAGCACACCTACCCGGCTACTGGGAGGACCTCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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| CDS GCA 72 bp | GCCAGAGGTCCTCCCAGTAGCCGGGTAGGTGTGCTTTaGACTGTCACCACCCGACCCGAAGGCACCTTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: ARGPPSSRVGVL*TVTTRPEGTFN Trigger: ATTAAAGGTGCCTTCGGGTCGGGTGGTGACAGTGCAAAGCACACCTACCCGGCTACTGGGAGGACCTCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155048.2 |
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| CDS CAA 90 bp | CACCCGACCCGAAGGCACCGTTGTGTTAAGACCTTTAATAACTGTTaGGTGGAATGTTGCATTCTGTGGTCGTTCAGTATATCTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HPTRRHRCVKTFNNC*VECCILWSFSISGG Trigger: TCCTCCAGATATACTGAACGACCACAGAATGCAACATTCCACCAAACAGTTATTAAAGGTCTTAACACAACGGTGCCTTCGGGTCGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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| CDS CAA 72 bp | GCATTTGATGTCCTAGCCAAGAAGTTTTCCCATGACTaGTTAGCCTGCTCTCTCTGCTTATGTGTAGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: AFDVLAKKFSHD*LACSLCLCVAC Trigger: ACAAGCTACACATAAGCAGAGAGAGCAGGCTAACAAGTCATGGGAAAACTTCTTGGCTAGGACATCAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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| CDS GCA 72 bp | GTCCTAGCCAAGAAGTTTTCCCATGACTTGTTAGCCTaGTCTCTCTGCTTATGTGTAGCTTGTATTTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VLAKKFSHDLLA*SLCLCVACIFA Trigger: TGCAAAAATACAAGCTACACATAAGCAGAGAGAGCAGGCTAACAAGTCATGGGAAAACTTCTTGGCTAGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000148347.8 ENSMUST00000196165.5 |
||
| CDS CAA 72 bp | ATACACTCTTTGTTCATTCTGCACATCCTGAAGGGCTaGGTTTTCAATCATCTCACTTTGCAAGGACGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: IHSLFILHILKG*VFNHLTLQGRN Trigger: GTTGCGTCCTTGCAAAGTGAGATGATTGAAAACCAAGCCCTTCAGGATGTGCAGAATGAACAAAGAGTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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| CDS CCA 72 bp | GGCACCGTTGTGTTAAGACCTTTAATAACTGTTTGGTaGAATGTTGCATTCTGTGGTCGTTCAGTATATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GTVVLRPLITVW*NVAFCGRSVYL Trigger: CAGATATACTGAACGACCACAGAATGCAACATTCCACCAAACAGTTATTAAAGGTCTTAACACAACGGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000148347.8 ENSMUST00000196165.5 |
||
| CDS CAA 90 bp | TTCATTCTGCACATCCTGAAGGGCTTGGTTTTCAATCATCTCACTTaGCAAGGACGCAACCATCTTTCCAATATTTTCTGTTGCTGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: FILHILKGLVFNHLT*QGRNHLSNIFCCCY Trigger: ATAGCAGCAACAGAAAATATTGGAAAGATGGTTGCGTCCTTGCAAAGTGAGATGATTGAAAACCAAGCCCTTCAGGATGTGCAGAATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000148347.8 ENSMUST00000196165.5 |
||
| CDS GCA 72 bp | GTCCTAGCCAAGAAGTTTTCCCATGACTTGTTAGCCTaGTCTCTCTGCTTATGTGTAGCTTGTATTTTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: VLAKKFSHDLLA*SLCLCVACILK Trigger: TTTTAAAATACAAGCTACACATAAGCAGAGAGAGCAGGCTAACAAGTCATGGGAAAACTTCTTGGCTAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124734.8 |
||
| CDS CAA 72 bp | CTGCTTATGTGTAGCTTGTATTTTTGCATACACTCTTaGTTCATTCTGCACATCCTGAAGGGCTTGGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLMCSLYFCIHS*FILHILKGLVF Trigger: GAAAACCAAGCCCTTCAGGATGTGCAGAATGAACAAAGAGTGTATGCAAAAATACAAGCTACACATAAGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000148347.8 ENSMUST00000196165.5 |
||
| CDS TCA 72 bp | ATTTTTGCATACACTCTTTGTTCATTCTGCACATCCTaGAGGGCTTGGTTTTCAATCATCTCACTTTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: IFAYTLCSFCTS*RAWFSIISLCK Trigger: CTTGCAAAGTGAGATGATTGAAAACCAAGCCCTTCAGGATGTGCAGAATGAACAAAGAGTGTATGCAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000148347.8 ENSMUST00000196165.5 |
||
| CDS GCA 72 bp | AAGAAGTTTTCCCATGACTTGTTAGCCTGCTCTCTCTaGTTATGTGTAGCTTGTATTTTTGCATACACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KKFSHDLLACSL*LCVACIFAYTL Trigger: AAGAGTGTATGCAAAAATACAAGCTACACATAAGCAGAGAGAGCAGGCTAACAAGTCATGGGAAAACTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000148347.8 ENSMUST00000196165.5 |
||
| CDS CCA 72 bp | ACCTTTAATAACTGTTTGGTGGAATGTTGCATTCTGTaGTCGTTCAGTATATCTGGAGGATTCTATAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: TFNNCLVECCIL*SFSISGGFYSL Trigger: AAGGCTATAGAATCCTCCAGATATACTGAACGACCACAGAATGCAACATTCCACCAAACAGTTATTAAAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054865.13 ENSMUST00000124734.8 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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| CDS GCA 72 bp | TTGCAAGGACGCAACCATCTTTCCAATATTTTCTGTTaGTGCTATAATGGAGTTCAAAGATTTTTCATCTGT | + |
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Preference number: 6 (lower is better) Translates to: LQGRNHLSNIFC*CYNGVQRFFIC Trigger: ACAGATGAAAAATCTTTGAACTCCATTATAGCAGCAACAGAAAATATTGGAAAGATGGTTGCGTCCTTGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054865.13 ENSMUST00000148347.8 ENSMUST00000196165.5 |
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