Pregenerated sensors for CFAP58 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046585Ensembl transcript IDs: ENSMUST00000066308.9, ENSMUST00000238163.2
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTATGTACAAGACACTaGCAGCTGCCCATCCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: MSHVEITLNIHFLKSQSCVCTRH*QLPIPS Trigger: GGAAGGGATGGGCAGCTGTCAGTGTCTTGTACATAC...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| 3UTR CAA 90 bp | CCTGGAACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTaGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCA | + |
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Preference number: 2 (lower is better) Translates to: PGTMSHVEITLNIHF*KSQSCVLLSYLMLS Trigger: TGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGTTCCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| 3UTR GCA 72 bp | CGACATCATCACTTGTATGTACAAGACACTGACAGCTaGCCATCCCTTCCAACTCTGAAAAGCTGGGCACCG | + |
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Preference number: 3 (lower is better) Translates to: RHHHLYVQDTDS*PSLPTLKSWAP Trigger: CGGTGCCCAGCTTTTCAGAGTTGGAAGGGATGGGCAGCTGTCAGTGTCTTGTACATACAAGTGATGATGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| 3UTR-3UTR CAA 90 bp | AATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTACCTGAGCTGTTGAGCTaGAGCCAGCCAGTAGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: NHSQYTLFEIPVMCPVILPELLS*SQPVAS Trigger: GGAAGCTACTGGCTGGCTCAAGCTCAACAGCTCAGG...TAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| 3UTR-3UTR CAA 90 bp | CCTGGAACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCAAATTTCCTGAGCTGTaGAGCTTGAGCCAGCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: PGTMSHVEITLNIHFLKSKFPEL*SLSQPV Trigger: TACTGGCTGGCTCAAGCTCAACAGCTCAGGAAATTT...GGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGTTCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| 3UTR CCA 72 bp | ATTTCTTCTTCAGAACAGATTTTCCTACCCCAGGCCTaGAACGATGTCCCACGTGGAAATCACTCTCAATAT | + |
|
Preference number: 3 (lower is better) Translates to: ISSSEQIFLPQA*NDVPRGNHSQY Trigger: ATATTGAGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTCTGAAGAAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| 3UTR TCA 72 bp | TGTCCCACGTGGAAATCACTCTCAATATACACTTTTTaGAATCCCAGTCATGTGTCCTGTTATCCTATCTCA | + |
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Preference number: 3 (lower is better) Translates to: CPTWKSLSIYTF*NPSHVSCYPIS Trigger: TGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGGTGGTCTGGTCGTCCTaGGAGAGCTTCAGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVAVVWSS*ESFRAV Trigger: CACAGCTCTGAAGCTCTCTCAGGACGACCAGACCAC...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR TCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGGCTGTCCTGATCCATTaGCAGTCCAGACCCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVAAVLIH*QSRPLL Trigger: GAGCAGGGGTCTGGACTGTCAATGGATCAGGACAGC...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR GCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGGACAGTCCAGACCCCTaGTCAACTAGTTTGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVADSPDP*STSLVR Trigger: CCTGACCAAACTAGTTGAGCAGGGGTCTGGACTGTC...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR GCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGGTCTCCTTGGCCTTTTaGTCCTTGTCATATGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVAVSLAF*SLSYAE Trigger: CTCGGCATATGACAAGGAGCAAAAGGCCAAGGAGAC...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR TCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGCAGACTTTTGTCTCCTaGAAGTTCGCTGAGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVAQTFVS*KFAENL Trigger: GAGGTTCTCAGCGAACTTTCAGGAGACAAAAGTCTG...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR GCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGGTTCACCACAATCTCTaGGTTCAGCTCTCTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVAVHHNL*VQLSAL Trigger: AAGTGCAGAGAGCTGAACGCAGAGATTGTGGTGAAC...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR GCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGTTGCTCCTTGTCATATaGCGAGTCCACCATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVALLLVI*RVHHLP Trigger: TGGAAGATGGTGGACTCGGCATATGACAAGGAGCAA...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR TCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGCTCCTGAAAGTTCGCTaGGAACCTCCTGAAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVALLKVR*EPPENL Trigger: AAGATTTTCAGGAGGTTCTCAGCGAACTTTCAGGAG...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR GCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGCTCGATTTCTTCAAATaGAGTTTCCTCCGGCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVALDFFK*SFLRHY Trigger: GTAATGCCGGAGGAAACTGCATTTGAAGAAATCGAG...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR GCA 90 bp | GAACAGATTTTCCTACCCCAGGCCTGGAACGATGTCCCACGTGGAAATCACTCTCTTGGCGTGCTCTGCTaGCTGCTGCTTTTCGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQIFLPQAWNDVPRGNHSLGVLC*LLLFDG Trigger: ACCATCGAAAAGCAGCAGGCAGCAGAGCACGCCAAG...AGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR GCA 90 bp | GAACAGATTTTCCTACCCCAGGCCTGGAACGATGTCCCACGTGGAAATCACTCTTGCCGGGCCAAGATGTaGTTCAGCTCCACATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQIFLPQAWNDVPRGNHSCRAKM*FSSTYS Trigger: GCTGTATGTGGAGCTGAAGCACATCTTGGCCCGGCA...AGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGCAAGAATTGTCTCCTTaGCCTTTTGCTCCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVAQELSP*PFAPCH Trigger: ATGACAAGGAGCAAAAGGCCAAGGAGACAATTCTTG...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR CCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGCCTGCTCAACTAGTTTaGTCAGGTTCACTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVAPAQLV*SGSLFP Trigger: AGGAAATAGTGAACCTGACCAAACTAGTTGAGCAGG...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR CCA 90 bp | GAACAGATTTTCCTACCCCAGGCCTGGAACGATGTCCCACGTGGAAATCACTCTCCGTCCATGTCCGTCTaGATCTGCCTGAGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EQIFLPQAWNDVPRGNHSPSMSV*ICLSSF Trigger: GAAAGAGCTCAGGCAGATCCAGACGGACATGGACGG...AGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CCA 90 bp | GAACAGATTTTCCTACCCCAGGCCTGGAACGATGTCCCACGTGGAAATCACTCTACCCGCTGGTTGTACTaGGTCTCGCCTTTGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQIFLPQAWNDVPRGNHSTRWLY*VSPLFS Trigger: GCTGAACAAAGGCGAGACCCAGTACAACCAGCGGGT...AGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CCA 90 bp | ACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCACTGCTCCGCAGCCTCTaGGCCAGGCTGCCGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TMSHVEITLNIHFLKSQSLLRSL*ARLPGQ Trigger: TTGGCCCGGCAGCCTGGCCCAGAGGCTGCGGAGCAG...TGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGTTTTTCATGATGGAGTaGAGTTTCTCATATTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVAFFMME*SFSYSV Trigger: GACCGAATATGAGAAACTTCACTCCATCATGAAAAA...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR TCA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGCGTAAGACTTTTTCATaGTGGAGTGAAGTTTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RWCMPLIPDNRARLRQVARKTFS*WSEVSH Trigger: ATGAGAAACTTCACTCCATCATGAAAAAGTCTTACG...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR GCA 90 bp | GAACAGATTTTCCTACCCCAGGCCTGGAACGATGTCCCACGTGGAAATCACTCTTTCCTTCTTAAGGGATaGGATGGTGGTCTGGTCGTC | + |
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Preference number: 4 (lower is better) Translates to: EQIFLPQAWNDVPRGNHSFLLKG*DGGLVV Trigger: GACGACCAGACCACCATCGCATCCCTTAAGAAGGAA...AGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR GCA 90 bp | CCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGCCTCTGGGCCAGGCTaGCGGGCCAAGATGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PRGNHSQYTLFEIPVMCPASGPG*RAKMCF Trigger: GAAGCACATCTTGGCCCGGCAGCCTGGCCCAGAGGC...AGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | GAACAGATTTTCCTACCCCAGGCCTGGAACGATGTCCCACGTGGAAATCACTCTTTTCCAGCTGAAAGATaGTCTTCCTCTGCTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EQIFLPQAWNDVPRGNHSFPAER*SSSASG Trigger: CCCAGAAGCAGAGGAAGATCATCTTTCAGCTGGAAA...AGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CCA 90 bp | CCTGGAACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCACCTTGGTTGCCTGGTaGAGGGGAAATCCACCCCCG | + |
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Preference number: 4 (lower is better) Translates to: PGTMSHVEITLNIHFLKSTLVAW*RGNPPP Trigger: CGGGGGTGGATTTCCCCTCCACCAGGCAACCAAGGT...GGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGTTCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | CCTGGAACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCGTGGTCTGGTCGTCCTaGGAGAGCTTCAGAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PGTMSHVEITLNIHFLKSVVWSS*ESFRAV Trigger: CACAGCTCTGAAGCTCTCTCAGGACGACCAGACCAC...GGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGTTCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR GCA 90 bp | CCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTCGCTGCTGTTCCAGATaGAGCTTCACGAGCGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: PRGNHSQYTLFEIPVMCPRCCSR*SFTSAA Trigger: AGCCGCGCTCGTGAAGCTGCATCTGGAACAGCAGCG...AGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CCA 90 bp | CAAAAGATCAGCTTTATGCCAAGGGCCATCTTAATTAGAGAGCTGCAATCACAGTCCAGGGCCTTCTGCTaGTTTTCCTGCGACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QKISFMPRAILIRELQSQSRAFC*FSCDSC Trigger: GCAGCTGTCGCAGGAAAACCAGCAGAAGGCCCTGGA...CTGTGATTGCAGCTCTCTAATTAAGATGGCCCTTGGCATAAAGCTGATCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CCA 90 bp | CATCATCACTTGTATGTACAAGACACTGACAGCTGCCCATCCCTTCCAACTCTGCCTCCAGGTTCTTCTTaGCTTGCTCGTGGAGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: HHHLYVQDTDSCPSLPTLPPGSS*LARGVS Trigger: TGAAACTCCACGAGCAAGCCAAGAAGAACCTGGAGG...CAGAGTTGGAAGGGATGGGCAGCTGTCAGTGTCTTGTACATACAAGTGATGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | GAACAGATTTTCCTACCCCAGGCCTGGAACGATGTCCCACGTGGAAATCACTCTGCCTTTGTTCAGCACTaGCTGTTGGATCTTAATCTT | + |
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Preference number: 4 (lower is better) Translates to: EQIFLPQAWNDVPRGNHSAFVQH*LLDLNL Trigger: AAGATTAAGATCCAACAGTCAGTGCTGAACAAAGGC...AGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTGGTACAGCTCCTGCCTaGGCTCCTCCACATTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLGTAPA*APPHWP Trigger: TGGCCAATGTGGAGGAGCTCAGGCAGGAGCTGTACC...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGCTGTCCTGATCCATTaGCAGTCCAGACCCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: MSHVEITLNIHFLKSQSCAVLIH*QSRPLL Trigger: GAGCAGGGGTCTGGACTGTCAATGGATCAGGACAGC...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | ACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCAGTATCTTCTGCTCCTTaGGCTGCTGTTCCAGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: TMSHVEITLNIHFLKSQSVSSAP*AAVPAA Trigger: AGCGGCTGGAACAGCAGCTCAAGGAGCAGAAGATAC...TGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | CCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTTTTCGCCGGACAAGTTaGGACCCCAGGATGTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: PRGNHSQYTLFEIPVMCPFRRTS*DPRMSL Trigger: GAGAGACATCCTGGGGTCTCAACTTGTCCGGCGAAA...AGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR GCA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTAGCTCCAGGGCCTTCTaGTGGTTTTCCTGCGACAGC | + |
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Preference number: 4 (lower is better) Translates to: MSHVEITLNIHFLKSQSCSSRAF*WFSCDS Trigger: GCTGTCGCAGGAAAACCAGCAGAAGGCCCTGGAGCT...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR GCA 90 bp | GAACAGATTTTCCTACCCCAGGCCTGGAACGATGTCCCACGTGGAAATCACTCTCTCTCTTCTACCTCCTaGTTTTCAATGAAGTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: EQIFLPQAWNDVPRGNHSLSSTS*FSMKCL Trigger: CAAACACTTCATTGAAAAGCAGGAGGTAGAAGAGAG...AGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR GCA 90 bp | TACCCAAAGCTTCATCCACCCCAAGTTTCTAAATCTAGTGCATTTCTAATCAGCTCCAACTCCTTCTTCTaGCTCACCCTCTCGCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: YPKLHPPQVSKSSAFLISSNSFF*LTLSPS Trigger: TGACGGCGAGAGGGTGAGGCAGAAGAAGGAGTTGGA...GCTGATTAGAAATGCACTAGATTTAGAAACTTGGGGTGGATGAAGCTTTGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | TACCCAAAGCTTCATCCACCCCAAGTTTCTAAATCTAGTGCATTTCTAATCAGCCGGATGTTGCTGTCCTaGTCCATTGACAGTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: YPKLHPPQVSKSSAFLISRMLLS*SIDSPD Trigger: GTCTGGACTGTCAATGGATCAGGACAGCAACATCCG...GCTGATTAGAAATGCACTAGATTTAGAAACTTGGGGTGGATGAAGCTTTGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | CATCATCACTTGTATGTACAAGACACTGACAGCTGCCCATCCCTTCCAACTCTGATTTCTTGTTGGAACTaGCTGATGGCCATTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HHHLYVQDTDSCPSLPTLISCWN*LMAISA Trigger: AGCTGAAATGGCCATCAGTCAGTTCCAACAAGAAAT...CAGAGTTGGAAGGGATGGGCAGCTGTCAGTGTCTTGTACATACAAGTGATGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | CCTGGAACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCCTCCTGCTTTTCAATaGAGTGTTTGGTCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PGTMSHVEITLNIHFLKSPPAFQ*SVWSPG Trigger: CCCTGGAGACCAAACACTTCATTGAAAAGCAGGAGG...GGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGTTCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CCA 90 bp | TACCCAAAGCTTCATCCACCCCAAGTTTCTAAATCTAGTGCATTTCTAATCAGCTTTCAGCTTCTTCCTTaGCGTGCTCTGCTGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: YPKLHPPQVSKSSAFLISFQLLP*RALLPA Trigger: AGCAGGCAGCAGAGCACGCCAAGGAAGAAGCTGAAA...GCTGATTAGAAATGCACTAGATTTAGAAACTTGGGGTGGATGAAGCTTTGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR TCA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTCTCCGCTTGCTTCTTTaGAGACTCCACCTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MSHVEITLNIHFLKSQSCLRLLL*RLHLSL Trigger: GAGAGAGAGGTGGAGTCTTCAAAGAAGCAAGCGGAG...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | CAAAAGATCAGCTTTATGCCAAGGGCCATCTTAATTAGAGAGCTGCAATCACAGGTTCACCACAATCTCTaGGTTCAGCTCTCTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: QKISFMPRAILIRELQSQVHHNL*VQLSAL Trigger: AAGTGCAGAGAGCTGAACGCAGAGATTGTGGTGAAC...CTGTGATTGCAGCTCTCTAATTAAGATGGCCCTTGGCATAAAGCTGATCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | ACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCAAAGATGATCTTCCTCTaGTTCTGGGCCTCGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TMSHVEITLNIHFLKSQSKMIFL*FWASSL Trigger: CAAGGACGAGGCCCAGAAGCAGAGGAAGATCATCTT...TGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CCA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTTCCAGCCCTAGGATCTaGTTCTTCAGGGTGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLSSPRI*FFRVSF Trigger: GAAGGACACCCTGAAGAACCAGATCCTAGGGCTGGA...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTCGAGCGCGGCTTCCTTaGCAGAGATTTCTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSHVEITLNIHFLKSQSCRARLP*QRFLPS Trigger: TGAAGGAAGAAATCTCTGCCAAGGAAGCCGCGCTCG...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | CATCATCACTTGTATGTACAAGACACTGACAGCTGCCCATCCCTTCCAACTCTGTCTCATATTCGGTCCTaGATTTTTCCAGACTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HHHLYVQDTDSCPSLPTLSHIRS*IFPDFC Trigger: ACAAAAGTCTGGAAAAATTCAGGACCGAATATGAGA...CAGAGTTGGAAGGGATGGGCAGCTGTCAGTGTCTTGTACATACAAGTGATGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | ATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATTGCTGTTCCAGCCGCTaGAGTTCCTCCTTGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITLNIHFLKSQSCVLLSYCCSSR*SSSLLL Trigger: CAAGAGCAAGGAGGAACTTCAGCGGCTGGAACAGCA...ATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | CCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTTCTGTGATTTCATCCTaGGCCTCCACCAGGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRGNHSQYTLFEIPVMCPSVISS*ASTRFL Trigger: CAAAAACCTGGTGGAGGCTCAGGATGAAATCACAGA...AGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | ACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATTGCTCCTTGTCATATaGCGAGTCCACCATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TMSHVEITLNIHFLKSQSLLLVI*RVHHLP Trigger: TGGAAGATGGTGGACTCGGCATATGACAAGGAGCAA...TGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | CAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTGACAGTCCAGACCCCTaGTCAACTAGTTTGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QYTLFEIPVMCPVILSHADSPDP*STSLVR Trigger: CCTGACCAAACTAGTTGAGCAGGGGTCTGGACTGTC...AGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTTTCAGGGTGTCCTTCTaGTGCTCCACTTCTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MSHVEITLNIHFLKSQSCFRVSF*CSTSAF Trigger: AAAGGCAGAAGTGGAGCAGCAGAAGGACACCCTGAA...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTAGGTTCTTCTTGGCTTaGTCGTGGAGTTTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLRFFLA*SWSFTR Trigger: CCTGGTGAAACTCCACGAGCAAGCCAAGAAGAACCT...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTCTGATGAGTCGCTTCTaGAGGGTGTGGATTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLLMSRF*RVWIFW Trigger: CCAGAAAATCCACACCCTGCAGAAGCGACTCATCAG...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CCA 90 bp | CAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTTCGAGGCGCATCTGGTaGATCTCATCCTCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QYTLFEIPVMCPVILSHASRRIW*ISSSLA Trigger: AGCCAAAGAGGATGAGATCCACCAGATGCGCCTCGA...AGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATCTGTGCACGTTCATaGGGTTCTCCAGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLNIHFLKSQSCVLLSYLICARS*GSPAPP Trigger: AGGAGGAGCTGGAGAACCCCATGAACGTGCACAGAT...GAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CCA 90 bp | CAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTCGCTTCTGCAGGGTGTaGATTTTCTGGATCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QYTLFEIPVMCPVILSHARFCRV*IFWISS Trigger: CGAGCTGATCCAGAAAATCCACACCCTGCAGAAGCG...AGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTCAGACTTTTGTCTCCTaGAAGTTCGCTGAGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLQTFVS*KFAENL Trigger: GAGGTTCTCAGCGAACTTTCAGGAGACAAAAGTCTG...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | TACCCAAAGCTTCATCCACCCCAAGTTTCTAAATCTAGTGCATTTCTAATCAGCCTTGTTGGAACTGACTaGTGGCCATTTCAGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YPKLHPPQVSKSSAFLISLVGTD*WPFQLL Trigger: AAGAAGCTGAAATGGCCATCAGTCAGTTCCAACAAG...GCTGATTAGAAATGCACTAGATTTAGAAACTTGGGGTGGATGAAGCTTTGGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTACAGGTTCCTGTCTaGTCTCACAGCTTCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: MSHVEITLNIHFLKSQSCVQVPV*SHSFIQ Trigger: CTGTATGAAGCTGTGAGATCAGACAGGAACCTGTAC...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | CAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTGTCTCCTTGGCCTTTTaGTCCTTGTCATATGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QYTLFEIPVMCPVILSHAVSLAF*SLSYAE Trigger: CTCGGCATATGACAAGGAGCAAAAGGCCAAGGAGAC...AGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | AATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATTCCTTGGCGTGCTCTaGTGCCTGCTGCTTTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: NHSQYTLFEIPVMCPVILFLGVL*CLLLFD Trigger: ATCGAAAAGCAGCAGGCAGCAGAGCACGCCAAGGAA...TAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | TACCCAAAGCTTCATCCACCCCAAGTTTCTAAATCTAGTGCATTTCTAATCAGCTTATCAAGCTCCGCTTaGTTCTTTGAAGACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YPKLHPPQVSKSSAFLISLSSSA*FFEDST Trigger: GGTGGAGTCTTCAAAGAAGCAAGCGGAGCTTGATAA...GCTGATTAGAAATGCACTAGATTTAGAAACTTGGGGTGGATGAAGCTTTGGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTAATGTCTTCCATGTTTaGAAGGACCCTCTGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLNVFHV*KDPLGE Trigger: CTCACCCAGAGGGTCCTTGCAAACATGGAAGACATT...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | CAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTTCCTTCTCAATGCGCTaGTGTTCCAGATGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QYTLFEIPVMCPVILSHASFSMR*CSRCSF Trigger: GAAGCTGCATCTGGAACAGCAGCGCATTGAGAAGGA...AGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | AATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTAATGTGGTACAGCTCCTaGCTGAGCTCCTCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: NHSQYTLFEIPVMCPVILMWYSS*LSSSTL Trigger: CAATGTGGAGGAGCTCAGGCAGGAGCTGTACCACAT...TAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | ACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCAAACTTCACCTTGGTTaGCTGGTGGAGGGGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TLNIHFLKSQSCVLLSYLKLHLG*LVEGKS Trigger: GGATTTCCCCTCCACCAGGCAACCAAGGTGAAGTTT...GAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CCA 90 bp | AATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTACCTGCTGCTTTTCGATaGTCTGAGCTAGGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NHSQYTLFEIPVMCPVILPAAFR*SELGSP Trigger: GGGAGAACCTAGCTCAGACCATCGAAAAGCAGCAGG...TAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCCTCTCACTGATGACCTaGTCCAACTCCTTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLNIHFLKSQSCVLLSYLLSLMT*SNSFFC Trigger: GCAGAAGAAGGAGTTGGACCAGGTCATCAGTGAGAG...GAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CCA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTAGGGTGTGGATTTTCTaGATCAGCTCGAAGGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLRVWIF*ISSKVL Trigger: TAGCACCTTCGAGCTGATCCAGAAAATCCACACCCT...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | ACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATCGTCACCTCTTCTTTaGACTTCAGTAAATCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TMSHVEITLNIHFLKSQSSSPLL*TSVNLG Trigger: TCCGAGATTTACTGAAGTTCAAAGAAGAGGTGACGA...TGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | AATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATGCTTTTCGATGGTCTaGGCTAGGTTCTCCCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NHSQYTLFEIPVMCPVILCFSMV*ARFSRN Trigger: ATTGCGGGAGAACCTAGCTCAGACCATCGAAAAGCA...TAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | CAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTTTGTGCATATACTGCTaGATAGCCTTGATCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QYTLFEIPVMCPVILSHALCIYC*IALISA Trigger: GGCGGAGATCAAGGCTATGCAGCAGTATATGCACAA...AGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | CAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTTCCTCCTTGCTCTTGTaGATATACTGCTGCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QYTLFEIPVMCPVILSHASSLLL*IYCCIA Trigger: GGCTATGCAGCAGTATATGCACAAGAGCAAGGAGGA...AGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGCTGAAGTTCCTCCTTaGTCTTGTGCATATACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSHVEITLNIHFLKSQSCAEVPP*SCAYTA Trigger: AGCAGTATATGCACAAGAGCAAGGAGGAACTTCAGC...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | ATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCAGAAGCTCCTCCATTaGCTTCTTATCAAGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ITLNIHFLKSQSCVLLSYQKLLH*LLIKLR Trigger: GCGGAGCTTGATAAGAAGGCAATGGAGGAGCTTCTG...ATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTTTCAGGAATTCTCTTTaGATGTGGTACAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MSHVEITLNIHFLKSQSCFRNSL*MWYSSC Trigger: GCAGGAGCTGTACCACATGCAAAGAGAATTCCTGAA...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | ACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATCAGAACGAGTTCTTTaGGTTTCTGAGCCAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TMSHVEITLNIHFLKSQSSERVL*VSEPGI Trigger: AATACCTGGCTCAGAAACGCAAAGAACTCGTTCTGA...TGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | CAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTTCCTCTTCATTTCTGTaGTTTCATCCTGAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QYTLFEIPVMCPVILSHASSSFL*FHPEPP Trigger: TGGAGGCTCAGGATGAAATCACAGAAATGAAGAGGA...AGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTCTCGATTTCTTCAAATaGAGTTTCCTCCGGCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: MSHVEITLNIHFLKSQSCLDFFK*SFLRHY Trigger: GTAATGCCGGAGGAAACTGCATTTGAAGAAATCGAG...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGAACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCTCATACAGGTTTTGCTaGTGTTTTAACTTCGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGTMSHVEITLNIHFLKSSYRFC*CFNFVS Trigger: AGAGACGAAGTTAAAACAGCAGCAAAACCTGTATGA...GGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGTTCCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CCA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTCAAGAATTGTCTCCTTaGCCTTTTGCTCCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLQELSP*PFAPCH Trigger: ATGACAAGGAGCAAAAGGCCAAGGAGACAATTCTTG...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | AATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTACTCCTGAAAGTTCGCTaGGAACCTCCTGAAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NHSQYTLFEIPVMCPVILLLKVR*EPPENL Trigger: AAGATTTTCAGGAGGTTCTCAGCGAACTTTCAGGAG...TAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | ACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCCCACTTGATGCGTCATaGTCTTTAACTTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLNIHFLKSQSCVLLSYLPLDAS*SLTSSS Trigger: TGAAGAGGAAGTTAAAGATCATGACGCATCAAGTGG...GAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR GCA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTGCTTCATACAGGTTTTaGTGCTGTTTTAACTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLASYRF*CCFNFV Trigger: GACGAAGTTAAAACAGCAGCAAAACCTGTATGAAGC...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CCA 90 bp | ATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCCTGCTCAACTAGTTTaGTCAGGTTCACTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITLNIHFLKSQSCVLLSYPAQLV*SGSLFP Trigger: AGGAAATAGTGAACCTGACCAAACTAGTTGAGCAGG...ATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | ACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCTTTTTCATGATGGAGTaGAGTTTCTCATATTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLNIHFLKSQSCVLLSYLFFMME*SFSYSV Trigger: GACCGAATATGAGAAACTTCACTCCATCATGAAAAA...GAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR TCA 90 bp | AATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTACGTAAGACTTTTTCATaGTGGAGTGAAGTTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NHSQYTLFEIPVMCPVILRKTFS*WSEVSH Trigger: ATGAGAAACTTCACTCCATCATGAAAAAGTCTTACG...TAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CAA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGTGCTGTCCTGATCCATaGACAGTCCAGACCCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RWCMPLIPDNRARLRQVACCPDP*TVQTPA Trigger: AGCAGGGGTCTGGACTGTCAATGGATCAGGACAGCA...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS CCA 90 bp | GGGATGCGATGGTGGTCTGGTCGTCCTGAGAGAGCTTCAGAGCTGTaGCAACCTTGGCCGAGTTCACCACAATCTCTGCGTTCAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GMRWWSGRPERASEL*QPWPSSPQSLRSAL Trigger: GAGAGCTGAACGCAGAGATTGTGGTGAACTCGGCCAAGGTTGCCACAGCTCTGAAGCTCTCTCAGGACGACCAGACCACCATCGCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS-3UTR CAA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGTTCAGCTCTCTGCACTaGGCCATGAGACGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RWCMPLIPDNRARLRQVAFSSLH*AMRRFS Trigger: TGAGAAGCGTCTCATGGCCAAGTGCAGAGAGCTGAA...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS CCA 90 bp | TGGTGGTCTGGTCGTCCTGAGAGAGCTTCAGAGCTGTGGCAACCTTaGCCGAGTTCACCACAATCTCTGCGTTCAGCTCTCTGCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWSGRPERASELWQP*PSSPQSLRSALCTW Trigger: CCAAGTGCAGAGAGCTGAACGCAGAGATTGTGGTGAACTCGGCCAAGGTTGCCACAGCTCTGAAGCTCTCTCAGGACGACCAGACCACCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS CCA 90 bp | TCCACCACCTCTTCCGTCTTGCTGATGAGTCGCTTCTGCAGGGTGTaGATTTTCTGGATCAGCTCGAAGGTGCTAGGGTCGCTGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: STTSSVLLMSRFCRV*IFWISSKVLGSLAS Trigger: TGAGGCCAGCGACCCTAGCACCTTCGAGCTGATCCAGAAAATCCACACCCTGCAGAAGCGACTCATCAGCAAGACGGAAGAGGTGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CAA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGCCTTCAGGGCAAGAATaGTCTCCTTGGCCTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RWCMPLIPDNRARLRQVAPSGQE*SPWPFA Trigger: AGCAAAAGGCCAAGGAGACAATTCTTGCCCTGAAGG...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS GCA 90 bp | TCCTTGCTCTTGTGCATATACTGCTGCATAGCCTTGATCTCCGCCTaGCTGCCGTCCATGTCCGTCTGGATCTGCCTGAGCTCTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLCIYCCIALISA*LPSMSVWICLSSFS Trigger: GGAGAAAGAGCTCAGGCAGATCCAGACGGACATGGACGGCAGGCAGGCGGAGATCAAGGCTATGCAGCAGTATATGCACAAGAGCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CCA 90 bp | ATCTGCTCGCGGATCTTGTTAAGCTTCCCAAGGTCGAGGCGCATCTaGTGGATCTCATCCTCTTTGGCTTTGAGCTCCAGGGCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ICSRILLSFPRSRRI*WISSSLALSSRAFC Trigger: GCAGAAGGCCCTGGAGCTCAAAGCCAAAGAGGATGAGATCCACCAGATGCGCCTCGACCTTGGGAAGCTTAACAAGATCCGCGAGCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CAA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGGCAAGAATTGTCTCCTaGGCCTTTTGCTCCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RWCMPLIPDNRARLRQVAARIVS*AFCSLS Trigger: TGACAAGGAGCAAAAGGCCAAGGAGACAATTCTTGC...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR CAA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGCCCTGCTCAACTAGTTaGGTCAGGTTCACTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RWCMPLIPDNRARLRQVAPCSTS*VRFTIS Trigger: GGAAATAGTGAACCTGACCAAACTAGTTGAGCAGGG...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR CAA 90 bp | GAACAGATTTTCCTACCCCAGGCCTGGAACGATGTCCCACGTGGAAATCACTCTCTGAGCTCCTCCACATaGGCCACACTCCTGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EQIFLPQAWNDVPRGNHSLSSST*ATLLAR Trigger: CCTTGCCAGGAGTGTGGCCAATGTGGAGGAGCTCAG...AGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS TCA 90 bp | GCTTCTTCCTTGGCGTGCTCTGCTGCCTGCTGCTTTTCGATGGTCTaGGCTAGGTTCTCCCGCAATTTCACCACTTCTGACAAGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASSLACSAACCFSMV*ARFSRNFTTSDKSW Trigger: CCAGCTCTTGTCAGAAGTGGTGAAATTGCGGGAGAACCTAGCTCAGACCATCGAAAAGCAGCAGGCAGCAGAGCACGCCAAGGAAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS TCA 90 bp | GTTCCACCTCCTTCGCAGCTCTCTCGTTCAGTATCTTCTGCTCCTTaGGCTGCTGTTCCAGCCGCTGAAGTTCCTCCTTGCTCTTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPPPSQLSRSVSSAP*AAVPAAEVPPCSCA Trigger: TGCACAAGAGCAAGGAGGAACTTCAGCGGCTGGAACAGCAGCTCAAGGAGCAGAAGATACTGAACGAGAGAGCTGCGAAGGAGGTGGAAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS GCA 90 bp | GAGCTTCAGAGCTGTGGCAACCTTGGCCGAGTTCACCACAATCTCTaGGTTCAGCTCTCTGCACTTGGCCATGAGACGCTTCTCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELQSCGNLGRVHHNL*VQLSALGHETLLIL Trigger: GAGAATGAGAAGCGTCTCATGGCCAAGTGCAGAGAGCTGAACGCAGAGATTGTGGTGAACTCGGCCAAGGTTGCCACAGCTCTGAAGCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS TCA 90 bp | TTCTCGATTTCCTTCTTAAGGGATGCGATGGTGGTCTGGTCGTCCTaGGAGAGCTTCAGAGCTGTGGCAACCTTGGCCGAGTTCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: FSISFLRDAMVVWSS*ESFRAVATLAEFTT Trigger: TGTGGTGAACTCGGCCAAGGTTGCCACAGCTCTGAAGCTCTCTCAGGACGACCAGACCACCATCGCATCCCTTAAGAAGGAAATCGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS GCA 90 bp | ACTTCTGCCTTTTGGTCATCGAGCTGGTGCAGTTTCTTGTGGATCTaGTCGCGGATCTTGTTAAGCTTCCCAAGGTCGAGGCGCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSAFWSSSWCSFLWI*SRILLSFPRSRRIW Trigger: CCAGATGCGCCTCGACCTTGGGAAGCTTAACAAGATCCGCGAGCAGATCCACAAGAAACTGCACCAGCTCGATGACCAAAAGGCAGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS GCA 90 bp | TCTCTCTCCAGCCCTAGGATCTGGTTCTTCAGGGTGTCCTTCTGCTaGTCCACTTCTGCCTTTTGGTCATCGAGCTGGTGCAGTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSPRIWFFRVSFC*STSAFWSSSWCSFL Trigger: CAAGAAACTGCACCAGCTCGATGACCAAAAGGCAGAAGTGGAGCAGCAGAAGGACACCCTGAAGAACCAGATCCTAGGGCTGGAGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS GCA 90 bp | TCCAGGTTCTTCTTGGCTTGCTCGTGGAGTTTCACCAGGTCCACCTaGTTCTGGGTCGCACTGACCGCCTTGAGCATATTCTTGTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SRFFLACSWSFTRST*FWVALTALSIFLFS Trigger: ACTGAACAAGAATATGCTCAAGGCGGTCAGTGCGACCCAGAAGCAGGTGGACCTGGTGAAACTCCACGAGCAAGCCAAGAAGAACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS GCA 90 bp | TTCTGTAGCTCGGCCTTCAATGTTTCTTTCTCCTTCTCAATGCGCTaGTGTTCCAGATGCAGCTTCACGAGCGCGGCTTCCTTGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FCSSAFNVSFSFSMR*CSRCSFTSAASLAE Trigger: CTCTGCCAAGGAAGCCGCGCTCGTGAAGCTGCATCTGGAACAGCAGCGCATTGAGAAGGAGAAAGAAACATTGAAGGCCGAGCTACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS GCA 90 bp | TCAGCTTCTGTAGCTCGGCCTTCAATGTTTCTTTCTCCTTCTCAATaGGCTGCTGTTCCAGATGCAGCTTCACGAGCGCGGCTTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SASVARPSMFLSPSQ*AAVPDAASRARLPW Trigger: CCAAGGAAGCCGCGCTCGTGAAGCTGCATCTGGAACAGCAGCGCATTGAGAAGGAGAAAGAAACATTGAAGGCCGAGCTACAGAAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CCA 90 bp | GCTTGCTTCTTTGAAGACTCCACCTCTCTCTCCAGCCCTAGGATCTaGTTCTTCAGGGTGTCCTTCTGCTGCTCCACTTCTGCCTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ACFFEDSTSLSSPRI*FFRVSFCCSTSAFW Trigger: CCAAAAGGCAGAAGTGGAGCAGCAGAAGGACACCCTGAAGAACCAGATCCTAGGGCTGGAGAGAGAGGTGGAGTCTTCAAAGAAGCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CCA 90 bp | AGCTTCTTGATCTCCAGTTTGAGGATGCGCATGTCCTCCACCCGCTaGTTGTACTGGGTCTCGCCTTTGTTCAGCACTGACTGTTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SFLISSLRMRMSSTR*LYWVSPLFSTDCWI Trigger: GATCCAACAGTCAGTGCTGAACAAAGGCGAGACCCAGTACAACCAGCGGGTGGAGGACATGCGCATCCTCAAACTGGAGATCAAGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CAA 90 bp | GAACAGATTTTCCTACCCCAGGCCTGGAACGATGTCCCACGTGGAAATCACTCTTGCTGTCCTGATCCATaGACAGTCCAGACCCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EQIFLPQAWNDVPRGNHSCCPDP*TVQTPA Trigger: AGCAGGGGTCTGGACTGTCAATGGATCAGGACAGCA...AGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS GCA 90 bp | CTCTCTCTCAGAAGCTCCTCCATTGCCTTCTTATCAAGCTCCGCTTaGTTCTTTGAAGACTCCACCTCTCTCTCCAGCCCTAGGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLRSSSIAFLSSSA*FFEDSTSLSSPRIW Trigger: CCAGATCCTAGGGCTGGAGAGAGAGGTGGAGTCTTCAAAGAAGCAAGCGGAGCTTGATAAGAAGGCAATGGAGGAGCTTCTGAGAGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CAA 90 bp | CGGTGGTGCATGCCTTTAATCCCAGATAACCGTGCCAGGCTGCGCCAGGTTGCGAATTTTTCCAGACTTTaGTCTCCTGAAAGTTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RWCMPLIPDNRARLRQVANFSRL*SPESSL Trigger: CAGCGAACTTTCAGGAGACAAAAGTCTGGAAAAATT...CGCAACCTGGCGCAGCCTGGCACGGTTATCTGGGATTAAAGGCATGCACCACCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238163.2 |
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| CDS-3UTR CAA 90 bp | GAACAGATTTTCCTACCCCAGGCCTGGAACGATGTCCCACGTGGAAATCACTCTTTCAGCTCTCTGCACTaGGCCATGAGACGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQIFLPQAWNDVPRGNHSFSSLH*AMRRFS Trigger: TGAGAAGCGTCTCATGGCCAAGTGCAGAGAGCTGAA...AGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CCA 90 bp | TTTCAGCTTCTTCCTTGGCGTGCTCTGCTGCCTGCTGCTTTTCGATaGTCTGAGCTAGGTTCTCCCGCAATTTCACCACTTCTGACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FQLLPWRALLPAAFR*SELGSPAISPLLTR Trigger: TCTTGTCAGAAGTGGTGAAATTGCGGGAGAACCTAGCTCAGACCATCGAAAAGCAGCAGGCAGCAGAGCACGCCAAGGAAGAAGCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CCA 90 bp | TTCTTCTTGGCTTGCTCGTGGAGTTTCACCAGGTCCACCTGCTTCTaGGTCGCACTGACCGCCTTGAGCATATTCTTGTTCAGTATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FFLACSWSFTRSTCF*VALTALSIFLFSMS Trigger: AGACATACTGAACAAGAATATGCTCAAGGCGGTCAGTGCGACCCAGAAGCAGGTGGACCTGGTGAAACTCCACGAGCAAGCCAAGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CCA 90 bp | ATCTCCAGTTTGAGGATGCGCATGTCCTCCACCCGCTGGTTGTACTaGGTCTCGCCTTTGTTCAGCACTGACTGTTGGATCTTAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISSLRMRMSSTRWLY*VSPLFSTDCWILIF Trigger: GAAGATTAAGATCCAACAGTCAGTGCTGAACAAAGGCGAGACCCAGTACAACCAGCGGGTGGAGGACATGCGCATCCTCAAACTGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CAA 90 bp | CATCATCACTTGTATGTACAAGACACTGACAGCTGCCCATCCCTTCCAACTCTGCTCCACTTCTGCCTTTaGGTCATCGAGCTGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HHHLYVQDTDSCPSLPTLLHFCL*VIELVQ Trigger: CTGCACCAGCTCGATGACCAAAAGGCAGAAGTGGAG...CAGAGTTGGAAGGGATGGGCAGCTGTCAGTGTCTTGTACATACAAGTGATGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CAA 90 bp | GAACAGATTTTCCTACCCCAGGCCTGGAACGATGTCCCACGTGGAAATCACTCTTCAGAAGCTCCTCCATaGCCTTCTTATCAAGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: EQIFLPQAWNDVPRGNHSSEAPP*PSYQAP Trigger: CGGAGCTTGATAAGAAGGCAATGGAGGAGCTTCTGA...AGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS TCA 90 bp | TGGAAGCTTCATTCTGACGATGCTGGATTTCTTGTTGGAACTGACTaGTGGCCATTTCAGCTTCTTCCTTGGCGTGCTCTGCTGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WKLHSDDAGFLVGTD*WPFQLLPWRALLPA Trigger: AGCAGGCAGCAGAGCACGCCAAGGAAGAAGCTGAAATGGCCATCAGTCAGTTCCAACAAGAAATCCAGCATCGTCAGAATGAAGCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS GCA 90 bp | TCAGCCTCGGCAATGATGCGCAAGAGTTTCCTCTCTTCTACCTCCTaGTTTTCAATGAAGTGTTTGGTCTCCAGGGCTTGTTGTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SASAMMRKSFLSSTS*FSMKCLVSRACCLS Trigger: GCTGAGACAACAAGCCCTGGAGACCAAACACTTCATTGAAAAGCAGGAGGTAGAAGAGAGGAAACTCTTGCGCATCATTGCCGAGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CCA 90 bp | TGGTCAGGTTCACTATTTCCTCCTTCAGGGCAAGAATTGTCTCCTTaGCCTTTTGCTCCTTGTCATATGCCGAGTCCACCATCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WSGSLFPPSGQELSP*PFAPCHMPSPPSSR Trigger: CCTGGAAGATGGTGGACTCGGCATATGACAAGGAGCAAAAGGCCAAGGAGACAATTCTTGCCCTGAAGGAGGAAATAGTGAACCTGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS CCA 90 bp | TGCTGTCCTGATCCATTGACAGTCCAGACCCCTGCTCAACTAGTTTaGTCAGGTTCACTATTTCCTCCTTCAGGGCAAGAATTGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CCPDPLTVQTPAQLV*SGSLFPPSGQELSP Trigger: AGGAGACAATTCTTGCCCTGAAGGAGGAAATAGTGAACCTGACCAAACTAGTTGAGCAGGGGTCTGGACTGTCAATGGATCAGGACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS-3UTR CAA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTAGGTCGCTGGCCTCGTaGATGTACCGGTCCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLRSLAS*MYRSRS Trigger: GGAACGGGACCGGTACATCAACGAGGCCAGCGACCT...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS TCA 90 bp | CCACTTCTGACAAGAGCTGGTCACGCTCCTTCGTCACCTCTTCTTTaGACTTCAGTAAATCTCGGATGTTGCTGTCCTGATCCATTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PLLTRAGHAPSSPLL*TSVNLGCCCPDPLT Trigger: TGTCAATGGATCAGGACAGCAACATCCGAGATTTACTGAAGTTCAAAGAAGAGGTGACGAAGGAGCGTGACCAGCTCTTGTCAGAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS GCA 90 bp | CTTCAGGGCAAGAATTGTCTCCTTGGCCTTTTGCTCCTTGTCATATaGCGAGTCCACCATCTTCCAGGCTTTCTCGATTTCCTTCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQGKNCLLGLLLLVI*RVHHLPGFLDFLLK Trigger: CTTAAGAAGGAAATCGAGAAAGCCTGGAAGATGGTGGACTCGGCATATGACAAGGAGCAAAAGGCCAAGGAGACAATTCTTGCCCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS-3UTR CAA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTTACTGCTGCATAGCCTaGATCTCCGCCTGCCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLYCCIA*ISACLP Trigger: CGGCAGGCAGGCGGAGATCAAGGCTATGCAGCAGTA...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CAA 90 bp | CAAAAGATCAGCTTTATGCCAAGGGCCATCTTAATTAGAGAGCTGCAATCACAGACCACCTCTTCCGTCTaGCTGATGAGTCGCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QKISFMPRAILIRELQSQTTSSV*LMSRFC Trigger: GCAGAAGCGACTCATCAGCAAGACGGAAGAGGTGGT...CTGTGATTGCAGCTCTCTAATTAAGATGGCCCTTGGCATAAAGCTGATCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CAA 90 bp | TACCCAAAGCTTCATCCACCCCAAGTTTCTAAATCTAGTGCATTTCTAATCAGCTCATCCTCTTTGGCTTaGAGCTCCAGGGCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YPKLHPPQVSKSSAFLISSSSLA*SSRAFC Trigger: GCAGAAGGCCCTGGAGCTCAAAGCCAAAGAGGATGA...GCTGATTAGAAATGCACTAGATTTAGAAACTTGGGGTGGATGAAGCTTTGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | TACCCAAAGCTTCATCCACCCCAAGTTTCTAAATCTAGTGCATTTCTAATCAGCTGGATCTCATCCTCTTaGGCTTTGAGCTCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YPKLHPPQVSKSSAFLISWISSS*ALSSRA Trigger: GGCCCTGGAGCTCAAAGCCAAAGAGGATGAGATCCA...GCTGATTAGAAATGCACTAGATTTAGAAACTTGGGGTGGATGAAGCTTTGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS-3UTR CAA 90 bp | CCTGGAACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCGAGGGACGGACTTCTaGGTCTCTGAGAAGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGTMSHVEITLNIHFLKSRGTDF*VSEKML Trigger: CAACATCTTCTCAGAGACCAAGAAGTCCGTCCCTCG...GGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGTTCCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | CCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTTCCTCCAGGTTCTTCTaGGCTTGCTCGTGGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRGNHSQYTLFEIPVMCPSSRFF*ACSWSF Trigger: GAAACTCCACGAGCAAGCCAAGAAGAACCTGGAGGA...AGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTTTCGCCGGACAAGTaGAGACCCCAGGATGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MSHVEITLNIHFLKSQSCVSPDK*RPQDVS Trigger: AGAGACATCCTGGGGTCTCAACTTGTCCGGCGAAAC...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CCA 90 bp | GACATCAGTTCATTGCCAAGTCTCTCGATCTCATACTTGTACTCCTaGCTCTGTGACTCGTACATATTCAACTCCGATGACAGAACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DISSLPSLSISYLYS*LCDSYIFNSDDRTF Trigger: GAAAGTTCTGTCATCGGAGTTGAATATGTACGAGTCACAGAGCCAGGAGTACAAGTATGAGATCGAGAGACTTGGCAATGAACTGATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | CATCATCACTTGTATGTACAAGACACTGACAGCTGCCCATCCCTTCCAACTCTGAATTTTTCCAGACTTTaGTCTCCTGAAAGTTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HHHLYVQDTDSCPSLPTLNFSRL*SPESSL Trigger: CAGCGAACTTTCAGGAGACAAAAGTCTGGAAAAATT...CAGAGTTGGAAGGGATGGGCAGCTGTCAGTGTCTTGTACATACAAGTGATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAGATCAGCTTTATGCCAAGGGCCATCTTAATTAGAGAGCTGCAATCACAGCCCTGCTCAACTAGTTaGGTCAGGTTCACTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKISFMPRAILIRELQSQPCSTS*VRFTIS Trigger: GGAAATAGTGAACCTGACCAAACTAGTTGAGCAGGG...CTGTGATTGCAGCTCTCTAATTAAGATGGCCCTTGGCATAAAGCTGATCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | CAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTAGTATCTTCTGCTCCTaGAGCTGCTGTTCCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QYTLFEIPVMCPVILSHASIFCS*SCCSSR Trigger: GCGGCTGGAACAGCAGCTCAAGGAGCAGAAGATACT...AGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS GCA 90 bp | AAGTTCGCTGAGAACCTCCTGAAAATCTTTCTCGATTTCTTCAAATaGAGTTTCCTCCGGCATTACTTTTTCAGCCTTGTCCTCCGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KFAENLLKIFLDFFK*SFLRHYFFSLVLRH Trigger: ATGACGGAGGACAAGGCTGAAAAAGTAATGCCGGAGGAAACTGCATTTGAAGAAATCGAGAAAGATTTTCAGGAGGTTCTCAGCGAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
||
| CDS GCA 90 bp | TGCGTTTCTGAGCCAGGTATTTCTTCTTTAAAGACATCAGTTCATTaGCAAGTCTCTCGATCTCATACTTGTACTCCTGGCTCTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: CVSEPGISSLKTSVH*QVSRSHTCTPGSVT Trigger: AGTCACAGAGCCAGGAGTACAAGTATGAGATCGAGAGACTTGGCAATGAACTGATGTCTTTAAAGAAGAAATACCTGGCTCAGAAACGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTTGTCTCCTTGGCCTTTaGCTCCTTGTCATATGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLCLLGL*LLVICR Trigger: TCGGCATATGACAAGGAGCAAAAGGCCAAGGAGACA...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTCCTTCAGGGCAAGAATaGTCTCCTTGGCCTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLPSGQE*SPWPFA Trigger: AGCAAAAGGCCAAGGAGACAATTCTTGCCCTGAAGG...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | ATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATACGAGCGCGGCTTCCTaGGCAGAGATTTCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ITLNIHFLKSQSCVLLSYTSAAS*AEISSF Trigger: GAAGGAAGAAATCTCTGCCAAGGAAGCCGCGCTCGT...ATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | CAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTTACTGGGTCTCGCCTTaGTTCAGCACTGACTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QYTLFEIPVMCPVILSHAYWVSP*FSTDCW Trigger: CCAACAGTCAGTGCTGAACAAAGGCGAGACCCAGTA...AGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | ACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCACTTCAGGAATTCTCTTaGCATGTGGTACAGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TMSHVEITLNIHFLKSQSLQEFS*HVVQLL Trigger: CAGGAGCTGTACCACATGCAAAGAGAATTCCTGAAG...TGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGCAAGAATTGTCTCCTaGGCCTTTTGCTCCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MSHVEITLNIHFLKSQSCARIVS*AFCSLS Trigger: TGACAAGGAGCAAAAGGCCAAGGAGACAATTCTTGC...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTACGATGCTGGATTTCTaGTTGGAACTGACTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: MSHVEITLNIHFLKSQSCTMLDF*LELTDG Trigger: GCCATCAGTCAGTTCCAACAAGAAATCCAGCATCGT...ACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTATGCTGGATTTCTTGTaGGAACTGACTGATGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLMLDFL*ELTDGH Trigger: ATGGCCATCAGTCAGTTCCAACAAGAAATCCAGCAT...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | ACGATGTCCCACGTGGAAATCACTCTCAATATACACTTTTTGAAATCCCAGTCATTTTCAATGAAGTGTTaGGTCTCCAGGGCTTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TMSHVEITLNIHFLKSQSFSMKC*VSRACC Trigger: ACAACAAGCCCTGGAGACCAAACACTTCATTGAAAA...TGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATTTCCACGTGGGACATCGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | AATCACTCTCAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATTCTTGATCTCCAGTTaGAGGATGCGCATGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NHSQYTLFEIPVMCPVILFLISS*RMRMSS Trigger: GGAGGACATGCGCATCCTCAAACTGGAGATCAAGAA...TAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTGAGAGTGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | CACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCACTTTTCGTCACCTCTTCTTaGAACTTCAGTAAATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: HFLKSQSCVLLSYLMLSLFVTSS*NFSKSR Trigger: CCGAGATTTACTGAAGTTCAAAGAAGAGGTGACGAA...AAGTGATAGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS GCA 90 bp | TGTTGTTCATCGACATCCTGTCCTTGTTTTTCAGAACGAGTTCTTTaGGTTTCTGAGCCAGGTATTTCTTCTTTAAAGACATCAGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CCSSTSCPCFSERVL*VSEPGISSLKTSVH Trigger: ATGAACTGATGTCTTTAAAGAAGAAATACCTGGCTCAGAAACGCAAAGAACTCGTTCTGAAAAACAAGGACAGGATGTCGATGAACAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS-3UTR CAA 90 bp | CAATATACACTTTTTGAAATCCCAGTCATGTGTCCTGTTATCCTATCTCATGCTATCGACATCCTGTCCTaGTTTTTCAGAACGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QYTLFEIPVMCPVILSHAIDILS*FFRTSS Trigger: AGAACTCGTTCTGAAAAACAAGGACAGGATGTCGAT...AGCATGAGATAGGATAACAGGACACATGACTGGGATTTCAAAAAGTGTATATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CAA 90 bp | CTGGCAAGGATCCCCTTCTCCCTTCGGAGCTTCTTGATCTCCAGTTaGAGGATGCGCATGTCCTCCACCCGCTGGTTGTACTGGGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LARIPFSLRSFLISS*RMRMSSTRWLYWVS Trigger: CGAGACCCAGTACAACCAGCGGGTGGAGGACATGCGCATCCTCAAACTGGAGATCAAGAAGCTCCGAAGGGAGAAGGGGATCCTTGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CAA 90 bp | TTGGCCACACTCCTGGCAAGGATCCCCTTCTCCCTTCGGAGCTTCTaGATCTCCAGTTTGAGGATGCGCATGTCCTCCACCCGCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LATLLARIPFSLRSF*ISSLRMRMSSTRWL Trigger: CAACCAGCGGGTGGAGGACATGCGCATCCTCAAACTGGAGATCAAGAAGCTCCGAAGGGAGAAGGGGATCCTTGCCAGGAGTGTGGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS TCA 72 bp | TCCTTCTTAAGGGATGCGATGGTGGTCTGGTCGTCCTaGGAGAGCTTCAGAGCTGTGGCAACCTTGGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SFLRDAMVVWSS*ESFRAVATLAE Trigger: CTCGGCCAAGGTTGCCACAGCTCTGAAGCTCTCTCAGGACGACCAGACCACCATCGCATCCCTTAAGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
||
| CDS TCA 72 bp | TCTTCTGCCTCACCCTCTCGCCGTCAGCCTCGGCAATaGTGCGCAAGAGTTTCCTCTCTTCTACCTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSASPSRRQPRQ*CARVSSLLPPA Trigger: AGCAGGAGGTAGAAGAGAGGAAACTCTTGCGCATCATTGCCGAGGCTGACGGCGAGAGGGTGAGGCAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS GCA 72 bp | TTGTGCATATACTGCTGCATAGCCTTGATCTCCGCCTaGCTGCCGTCCATGTCCGTCTGGATCTGCCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LCIYCCIALISA*LPSMSVWICLS Trigger: GCTCAGGCAGATCCAGACGGACATGGACGGCAGGCAGGCGGAGATCAAGGCTATGCAGCAGTATATGCACAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CCA 72 bp | GGTCGTCCTGAGAGAGCTTCAGAGCTGTGGCAACCTTaGCCGAGTTCACCACAATCTCTGCGTTCAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GRPERASELWQP*PSSPQSLRSAL Trigger: GAGAGCTGAACGCAGAGATTGTGGTGAACTCGGCCAAGGTTGCCACAGCTCTGAAGCTCTCTCAGGACGACC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
||
| CDS CAA 72 bp | CCAAGGTCGAGGCGCATCTGGTGGATCTCATCCTCTTaGGCTTTGAGCTCCAGGGCCTTCTGCTGGTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PRSRRIWWISSS*ALSSRAFCWFS Trigger: GGAAAACCAGCAGAAGGCCCTGGAGCTCAAAGCCAAAGAGGATGAGATCCACCAGATGCGCCTCGACCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CAA 72 bp | CTCCTGGCAAGGATCCCCTTCTCCCTTCGGAGCTTCTaGATCTCCAGTTTGAGGATGCGCATGTCCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LLARIPFSLRSF*ISSLRMRMSST Trigger: GGTGGAGGACATGCGCATCCTCAAACTGGAGATCAAGAAGCTCCGAAGGGAGAAGGGGATCCTTGCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CAA 90 bp | TTAAGCTTCCCAAGGTCGAGGCGCATCTGGTGGATCTCATCCTCTTaGGCTTTGAGCTCCAGGGCCTTCTGCTGGTTTTCCTGCGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSFPRSRRIWWISSS*ALSSRAFCWFSCDS Trigger: GCTGTCGCAGGAAAACCAGCAGAAGGCCCTGGAGCTCAAAGCCAAAGAGGATGAGATCCACCAGATGCGCCTCGACCTTGGGAAGCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS GCA 72 bp | AGCTGTGGCAACCTTGGCCGAGTTCACCACAATCTCTaGGTTCAGCTCTCTGCACTTGGCCATGAGACGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SCGNLGRVHHNL*VQLSALGHETL Trigger: AAGCGTCTCATGGCCAAGTGCAGAGAGCTGAACGCAGAGATTGTGGTGAACTCGGCCAAGGTTGCCACAGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
||
| CDS GCA 72 bp | AGCCCTAGGATCTGGTTCTTCAGGGTGTCCTTCTGCTaGTCCACTTCTGCCTTTTGGTCATCGAGCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPRIWFFRVSFC*STSAFWSSSWC Trigger: GCACCAGCTCGATGACCAAAAGGCAGAAGTGGAGCAGCAGAAGGACACCCTGAAGAACCAGATCCTAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS GCA 72 bp | TTCTTGGCTTGCTCGTGGAGTTTCACCAGGTCCACCTaGTTCTGGGTCGCACTGACCGCCTTGAGCATATTC | + |
|
Preference number: 6 (lower is better) Translates to: FLACSWSFTRST*FWVALTALSIF Trigger: GAATATGCTCAAGGCGGTCAGTGCGACCCAGAAGCAGGTGGACCTGGTGAAACTCCACGAGCAAGCCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CCA 72 bp | GCTTGCTCGTGGAGTTTCACCAGGTCCACCTGCTTCTaGGTCGCACTGACCGCCTTGAGCATATTCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ACSWSFTRSTCF*VALTALSIFLF Trigger: GAACAAGAATATGCTCAAGGCGGTCAGTGCGACCCAGAAGCAGGTGGACCTGGTGAAACTCCACGAGCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CCA 72 bp | TTGAGGATGCGCATGTCCTCCACCCGCTGGTTGTACTaGGTCTCGCCTTTGTTCAGCACTGACTGTTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LRMRMSSTRWLY*VSPLFSTDCWI Trigger: GATCCAACAGTCAGTGCTGAACAAAGGCGAGACCCAGTACAACCAGCGGGTGGAGGACATGCGCATCCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CCA 72 bp | ATCTCCAGTTTGAGGATGCGCATGTCCTCCACCCGCTaGTTGTACTGGGTCTCGCCTTTGTTCAGCACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: ISSLRMRMSSTR*LYWVSPLFSTD Trigger: GTCAGTGCTGAACAAAGGCGAGACCCAGTACAACCAGCGGGTGGAGGACATGCGCATCCTCAAACTGGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CAA 72 bp | AGCTGGTGCAGTTTCTTGTGGATCTGCTCGCGGATCTaGTTAAGCTTCCCAAGGTCGAGGCGCATCTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SWCSFLWICSRI*LSFPRSRRIWW Trigger: CCACCAGATGCGCCTCGACCTTGGGAAGCTTAACAAGATCCGCGAGCAGATCCACAAGAAACTGCACCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CAA 72 bp | TCCAGTTTGAGGATGCGCATGTCCTCCACCCGCTGGTaGTACTGGGTCTCGCCTTTGTTCAGCACTGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSLRMRMSSTRW*YWVSPLFSTDC Trigger: ACAGTCAGTGCTGAACAAAGGCGAGACCCAGTACAACCAGCGGGTGGAGGACATGCGCATCCTCAAACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CAA 72 bp | ATCCCCTTCTCCCTTCGGAGCTTCTTGATCTCCAGTTaGAGGATGCGCATGTCCTCCACCCGCTGGTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: IPFSLRSFLISS*RMRMSSTRWLY Trigger: GTACAACCAGCGGGTGGAGGACATGCGCATCCTCAAACTGGAGATCAAGAAGCTCCGAAGGGAGAAGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS TCA 72 bp | TTGGCGTGCTCTGCTGCCTGCTGCTTTTCGATGGTCTaGGCTAGGTTCTCCCGCAATTTCACCACTTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LACSAACCFSMV*ARFSRNFTTSD Trigger: GTCAGAAGTGGTGAAATTGCGGGAGAACCTAGCTCAGACCATCGAAAAGCAGCAGGCAGCAGAGCACGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS TCA 72 bp | TCAGGAATTCTCTTTGCATGTGGTACAGCTCCTGCCTaGGCTCCTCCACATTGGCCACACTCCTGGCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGILFACGTAPA*APPHWPHSWQG Trigger: TCCTTGCCAGGAGTGTGGCCAATGTGGAGGAGCTCAGGCAGGAGCTGTACCACATGCAAAGAGAATTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CCA 72 bp | TCATCCTCTTTGGCTTTGAGCTCCAGGGCCTTCTGCTaGTTTTCCTGCGACAGCTGCTCACAAGTCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLALSSRAFC*FSCDSCSQVRV Trigger: CACTCTGACTTGTGAGCAGCTGTCGCAGGAAAACCAGCAGAAGGCCCTGGAGCTCAAAGCCAAAGAGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CCA 72 bp | CGGATCTTGTTAAGCTTCCCAAGGTCGAGGCGCATCTaGTGGATCTCATCCTCTTTGGCTTTGAGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RILLSFPRSRRI*WISSSLALSSR Trigger: CCTGGAGCTCAAAGCCAAAGAGGATGAGATCCACCAGATGCGCCTCGACCTTGGGAAGCTTAACAAGATCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CCA 72 bp | GCTGTTCCAGATGCAGCTTCACGAGCGCGGCTTCCTTaGCAGAGATTTCTTCCTTCAGCTGGTCCACTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: AVPDAASRARLP*QRFLPSAGPLD Trigger: ATCAAGTGGACCAGCTGAAGGAAGAAATCTCTGCCAAGGAAGCCGCGCTCGTGAAGCTGCATCTGGAACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CCA 72 bp | TCTTCCGTCTTGCTGATGAGTCGCTTCTGCAGGGTGTaGATTTTCTGGATCAGCTCGAAGGTGCTAGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSVLLMSRFCRV*IFWISSKVLGS Trigger: CGACCCTAGCACCTTCGAGCTGATCCAGAAAATCCACACCCTGCAGAAGCGACTCATCAGCAAGACGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS GCA 72 bp | CTGGTTCTTCAGGGTGTCCTTCTGCTGCTCCACTTCTaGCTTTTGGTCATCGAGCTGGTGCAGTTTCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVLQGVLLLLHF*LLVIELVQFLV Trigger: CACAAGAAACTGCACCAGCTCGATGACCAAAAGGCAGAAGTGGAGCAGCAGAAGGACACCCTGAAGAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CCA 72 bp | TTTGAAGACTCCACCTCTCTCTCCAGCCCTAGGATCTaGTTCTTCAGGGTGTCCTTCTGCTGCTCCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FEDSTSLSSPRI*FFRVSFCCSTS Trigger: AGAAGTGGAGCAGCAGAAGGACACCCTGAAGAACCAGATCCTAGGGCTGGAGAGAGAGGTGGAGTCTTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CAA 72 bp | ACCAGGTCCACCTGCTTCTGGGTCGCACTGACCGCCTaGAGCATATTCTTGTTCAGTATGTCTCTCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TRSTCFWVALTA*SIFLFSMSLSL Trigger: GAGAGAGAGAGACATACTGAACAAGAATATGCTCAAGGCGGTCAGTGCGACCCAGAAGCAGGTGGACCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CAA 90 bp | TTCCTGCGACAGCTGCTCACAAGTCAGAGTGTGCTGATCATTCTCTaGCTGCAGTTTCGCGTTCCGCATCTGAAACTGTTCCACCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FLRQLLTSQSVLIIL*LQFRVPHLKLFHLL Trigger: AAGGAGGTGGAACAGTTTCAGATGCGGAACGCGAAACTGCAGCAAGAGAATGATCAGCACACTCTGACTTGTGAGCAGCTGTCGCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS CAA 90 bp | TTCTTGATCTCCAGTTTGAGGATGCGCATGTCCTCCACCCGCTGGTaGTACTGGGTCTCGCCTTTGTTCAGCACTGACTGTTGGATCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FLISSLRMRMSSTRW*YWVSPLFSTDCWIL Trigger: TAAGATCCAACAGTCAGTGCTGAACAAAGGCGAGACCCAGTACAACCAGCGGGTGGAGGACATGCGCATCCTCAAACTGGAGATCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
||
| CDS TCA 72 bp | TTTTCCTGCGACAGCTGCTCACAAGTCAGAGTGTGCTaGTCATTCTCTTGCTGCAGTTTCGCGTTCCGCATC | + |
|
Preference number: 6 (lower is better) Translates to: FSCDSCSQVRVC*SFSCCSFAFRI Trigger: GATGCGGAACGCGAAACTGCAGCAAGAGAATGATCAGCACACTCTGACTTGTGAGCAGCTGTCGCAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS GCA 72 bp | CATCTTCCAGGCTTTCTCGATTTCCTTCTTAAGGGATaGGATGGTGGTCTGGTCGTCCTGAGAGAGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: HLPGFLDFLLKG*DGGLVVLRELQ Trigger: CTGAAGCTCTCTCAGGACGACCAGACCACCATCGCATCCCTTAAGAAGGAAATCGAGAAAGCCTGGAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS CCA 72 bp | TCTGCCTTTTGGTCATCGAGCTGGTGCAGTTTCTTGTaGATCTGCTCGCGGATCTTGTTAAGCTTCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SAFWSSSWCSFL*ICSRILLSFPR Trigger: CCTTGGGAAGCTTAACAAGATCCGCGAGCAGATCCACAAGAAACTGCACCAGCTCGATGACCAAAAGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 72 bp | CCTCCATTGCCTTCTTATCAAGCTCCGCTTGCTTCTTaGAAGACTCCACCTCTCTCTCCAGCCCTAGGATCT | + |
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Preference number: 6 (lower is better) Translates to: PPLPSYQAPLAS*KTPPLSPALGS Trigger: AGATCCTAGGGCTGGAGAGAGAGGTGGAGTCTTCAAAGAAGCAAGCGGAGCTTGATAAGAAGGCAATGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 72 bp | TGCTTCTGGGTCGCACTGACCGCCTTGAGCATATTCTaGTTCAGTATGTCTCTCTCTCTCAGAAGCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CFWVALTALSIF*FSMSLSLRSSS Trigger: GGAGGAGCTTCTGAGAGAGAGAGACATACTGAACAAGAATATGCTCAAGGCGGTCAGTGCGACCCAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 90 bp | TCAGAAGCTCCTCCATTGCCTTCTTATCAAGCTCCGCTTGCTTCTTaGAAGACTCCACCTCTCTCTCCAGCCCTAGGATCTGGTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SEAPPLPSYQAPLAS*KTPPLSPALGSGSS Trigger: TGAAGAACCAGATCCTAGGGCTGGAGAGAGAGGTGGAGTCTTCAAAGAAGCAAGCGGAGCTTGATAAGAAGGCAATGGAGGAGCTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 90 bp | CGCAAGAGTTTCCTCTCTTCTACCTCCTGCTTTTCAATGAAGTGTTaGGTCTCCAGGGCTTGTTGTCTCAGCTTCTGTAGCTCGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RKSFLSSTSCFSMKC*VSRACCLSFCSSAF Trigger: GAAGGCCGAGCTACAGAAGCTGAGACAACAAGCCCTGGAGACCAAACACTTCATTGAAAAGCAGGAGGTAGAAGAGAGGAAACTCTTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS TCA 72 bp | CCGCTGGTTGTACTGGGTCTCGCCTTTGTTCAGCACTaGCTGTTGGATCTTAATCTTCTCATAGAGCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PLVVLGLAFVQH*LLDLNLLIEQG Trigger: GCCTTGCTCTATGAGAAGATTAAGATCCAACAGTCAGTGCTGAACAAAGGCGAGACCCAGTACAACCAGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 72 bp | TTCAGGGCAAGAATTGTCTCCTTGGCCTTTTGCTCCTaGTCATATGCCGAGTCCACCATCTTCCAGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: FRARIVSLAFCS*SYAESTIFQAF Trigger: GAAAGCCTGGAAGATGGTGGACTCGGCATATGACAAGGAGCAAAAGGCCAAGGAGACAATTCTTGCCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS CAA 72 bp | CAGCTGCTCACAAGTCAGAGTGTGCTGATCATTCTCTaGCTGCAGTTTCGCGTTCCGCATCTGAAACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: QLLTSQSVLIIL*LQFRVPHLKLF Trigger: GAACAGTTTCAGATGCGGAACGCGAAACTGCAGCAAGAGAATGATCAGCACACTCTGACTTGTGAGCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 72 bp | ACTTCTGCCTTTTGGTCATCGAGCTGGTGCAGTTTCTaGTGGATCTGCTCGCGGATCTTGTTAAGCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TSAFWSSSWCSF*WICSRILLSFP Trigger: TGGGAAGCTTAACAAGATCCGCGAGCAGATCCACAAGAAACTGCACCAGCTCGATGACCAAAAGGCAGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 72 bp | ATGTCCTCCACCCGCTGGTTGTACTGGGTCTCGCCTTaGTTCAGCACTGACTGTTGGATCTTAATCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: MSSTRWLYWVSP*FSTDCWILIFS Trigger: TGAGAAGATTAAGATCCAACAGTCAGTGCTGAACAAAGGCGAGACCCAGTACAACCAGCGGGTGGAGGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 90 bp | TTGGTCAGGTTCACTATTTCCTCCTTCAGGGCAAGAATTGTCTCCTaGGCCTTTTGCTCCTTGTCATATGCCGAGTCCACCATCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LVRFTISSFRARIVS*AFCSLSYAESTIFQ Trigger: CTGGAAGATGGTGGACTCGGCATATGACAAGGAGCAAAAGGCCAAGGAGACAATTCTTGCCCTGAAGGAGGAAATAGTGAACCTGACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS TCA 72 bp | CATTCTGACGATGCTGGATTTCTTGTTGGAACTGACTaGTGGCCATTTCAGCTTCTTCCTTGGCGTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HSDDAGFLVGTD*WPFQLLPWRAL Trigger: CAGAGCACGCCAAGGAAGAAGCTGAAATGGCCATCAGTCAGTTCCAACAAGAAATCCAGCATCGTCAGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CCA 72 bp | GATCCATTGACAGTCCAGACCCCTGCTCAACTAGTTTaGTCAGGTTCACTATTTCCTCCTTCAGGGCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: DPLTVQTPAQLV*SGSLFPPSGQE Trigger: TTCTTGCCCTGAAGGAGGAAATAGTGAACCTGACCAAACTAGTTGAGCAGGGGTCTGGACTGTCAATGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS CAA 72 bp | TGGTCAGGTTCACTATTTCCTCCTTCAGGGCAAGAATaGTCTCCTTGGCCTTTTGCTCCTTGTCATATGCCG | + |
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Preference number: 6 (lower is better) Translates to: WSGSLFPPSGQE*SPWPFAPCHMP Trigger: CGGCATATGACAAGGAGCAAAAGGCCAAGGAGACAATTCTTGCCCTGAAGGAGGAAATAGTGAACCTGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS CAA 90 bp | CAACTAGTTTGGTCAGGTTCACTATTTCCTCCTTCAGGGCAAGAATaGTCTCCTTGGCCTTTTGCTCCTTGTCATATGCCGAGTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: QLVWSGSLFPPSGQE*SPWPFAPCHMPSPP Trigger: TGGTGGACTCGGCATATGACAAGGAGCAAAAGGCCAAGGAGACAATTCTTGCCCTGAAGGAGGAAATAGTGAACCTGACCAAACTAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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| CDS TCA 72 bp | ACAAGAGCTGGTCACGCTCCTTCGTCACCTCTTCTTTaGACTTCAGTAAATCTCGGATGTTGCTGTCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: TRAGHAPSSPLL*TSVNLGCCCPD Trigger: ATCAGGACAGCAACATCCGAGATTTACTGAAGTTCAAAGAAGAGGTGACGAAGGAGCGTGACCAGCTCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS TCA 72 bp | AGCCTCCACCAGGTTTTTGCTGTACAGGTTCCTGTCTaGTCTCACAGCTTCATACAGGTTTTGCTGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SLHQVFAVQVPV*SHSFIQVLLLF Trigger: AAACAGCAGCAAAACCTGTATGAAGCTGTGAGATCAGACAGGAACCTGTACAGCAAAAACCTGGTGGAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 72 bp | ACTTCAGTAAATCTCGGATGTTGCTGTCCTGATCCATaGACAGTCCAGACCCCTGCTCAACTAGTTTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TSVNLGCCCPDP*TVQTPAQLVWS Trigger: TGACCAAACTAGTTGAGCAGGGGTCTGGACTGTCAATGGATCAGGACAGCAACATCCGAGATTTACTGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 72 bp | AACCGAGGGACGGACTTCTTGGTCTCTGAGAAGATGTaGTTCATCGACATCCTGTCCTTGTTTTTCAGAACG | + |
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Preference number: 6 (lower is better) Translates to: NRGTDFLVSEKM*FIDILSLFFRT Trigger: CGTTCTGAAAAACAAGGACAGGATGTCGATGAACAACATCTTCTCAGAGACCAAGAAGTCCGTCCCTCGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CCA 72 bp | TCATTGCCAAGTCTCTCGATCTCATACTTGTACTCCTaGCTCTGTGACTCGTACATATTCAACTCCGATGAC | + |
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Preference number: 6 (lower is better) Translates to: SLPSLSISYLYS*LCDSYIFNSDD Trigger: GTCATCGGAGTTGAATATGTACGAGTCACAGAGCCAGGAGTACAAGTATGAGATCGAGAGACTTGGCAATGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 72 bp | TGTTCAGTATGTCTCTCTCTCTCAGAAGCTCCTCCATaGCCTTCTTATCAAGCTCCGCTTGCTTCTTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: CSVCLSLSEAPP*PSYQAPLASLK Trigger: CTTCAAAGAAGCAAGCGGAGCTTGATAAGAAGGCAATGGAGGAGCTTCTGAGAGAGAGAGACATACTGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 72 bp | GACATCAGTTCATTGCCAAGTCTCTCGATCTCATACTaGTACTCCTGGCTCTGTGACTCGTACATATTCAAC | + |
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Preference number: 6 (lower is better) Translates to: DISSLPSLSISY*YSWLCDSYIFN Trigger: GTTGAATATGTACGAGTCACAGAGCCAGGAGTACAAGTATGAGATCGAGAGACTTGGCAATGAACTGATGTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS GCA 72 bp | AGGTTCCTGTCTGATCTCACAGCTTCATACAGGTTTTaGTGCTGTTTTAACTTCGTCTCTGATTCGGCAATT | + |
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Preference number: 6 (lower is better) Translates to: RFLSDLTASYRF*CCFNFVSDSAI Trigger: AATTGCCGAATCAGAGACGAAGTTAAAACAGCAGCAAAACCTGTATGAAGCTGTGAGATCAGACAGGAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS GCA 72 bp | GAGCCAGGTATTTCTTCTTTAAAGACATCAGTTCATTaGCAAGTCTCTCGATCTCATACTTGTACTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: EPGISSLKTSVH*QVSRSHTCTPG Trigger: GCCAGGAGTACAAGTATGAGATCGAGAGACTTGGCAATGAACTGATGTCTTTAAAGAAGAAATACCTGGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS CAA 90 bp | TTCTTTAAAGACATCAGTTCATTGCCAAGTCTCTCGATCTCATACTaGTACTCCTGGCTCTGTGACTCGTACATATTCAACTCCGATGAC | + |
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Preference number: 6 (lower is better) Translates to: FFKDISSLPSLSISY*YSWLCDSYIFNSDD Trigger: GTCATCGGAGTTGAATATGTACGAGTCACAGAGCCAGGAGTACAAGTATGAGATCGAGAGACTTGGCAATGAACTGATGTCTTTAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066308.9 |
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| CDS GCA 72 bp | GAGAACCTCCTGAAAATCTTTCTCGATTTCTTCAAATaGAGTTTCCTCCGGCATTACTTTTTCAGCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: ENLLKIFLDFFK*SFLRHYFFSLV Trigger: GACAAGGCTGAAAAAGTAATGCCGGAGGAAACTGCATTTGAAGAAATCGAGAAAGATTTTCAGGAGGTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066308.9 ENSMUST00000238163.2 |
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