Pregenerated sensors for CFAP54 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020014Ensembl transcript IDs: ENSMUST00000020200.14, ENSMUST00000067705.8, ENSMUST00000163209.3, ENSMUST00000164979.2, ENSMUST00000168110.8, ENSMUST00000168617.3, ENSMUST00000170065.8, ENSMUST00000212902.2, ENSMUST00000220280.2
Found 513 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ATCTGGCCCCAGATTCTGCAGCCCTTCAGTTTGCTTGCGCTCTGGTaGCTGCAGGGAGCTCTCAGCCCTGCAACCTCCGGCTGGGCTGTG | + |
Preference number: 1 (lower is better) Translates to: IWPQILQPFSLLALW*LQGALSPATSGWAV Trigger: CACAGCCCAGCCGGAGGTTGCAGGGCTGAGAGCTCCCTGCAGTCACCAGAGCGCAAGCAAACTGAAGGGCTGCAGAATCTGGGGCCAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR GCA 90 bp | ACCTCTGGACATCTGGCCCCAGATTCTGCAGCCCTTCAGTTTGCTTaGGCTCTGGTGACTGCAGGGAGCTCTCAGCCCTGCAACCTCCGG | + |
Preference number: 1 (lower is better) Translates to: TSGHLAPDSAALQFA*ALVTAGSSQPCNLR Trigger: CCGGAGGTTGCAGGGCTGAGAGCTCCCTGCAGTCACCAGAGCGCAAGCAAACTGAAGGGCTGCAGAATCTGGGGCCAGATGTCCAGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR TCA 90 bp | TTAACCTCTGAGATGAACGGCGCGGGCTTCAGGGTCACAGAGCAGTaGGTCCGGGCCAGCAGGATGGGTGGGGGAGGAATTCTGCTCTTC | + |
Preference number: 1 (lower is better) Translates to: LTSEMNGAGFRVTEQ*VRASRMGGGGILLF Trigger: GAAGAGCAGAATTCCTCCCCCACCCATCCTGCTGGCCCGGACTCACTGCTCTGTGACCCTGAAGCCCGCGCCGTTCATCTCAGAGGTTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR GCA 90 bp | CTCCTCCTCTTCCAGGGGACTCACCTGTATGCTGGCCTGTATCTCTaGAGGGCGATTGCTGCCAGGTGTAGCCTAGCCTCCACCATGATC | + |
Preference number: 1 (lower is better) Translates to: LLLFQGTHLYAGLYL*RAIAARCSLASTMI Trigger: GATCATGGTGGAGGCTAGGCTACACCTGGCAGCAATCGCCCTGCAGAGATACAGGCCAGCATACAGGTGAGTCCCCTGGAAGAGGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR GCA 90 bp | TGGTACCTCTGGACATCTGGCCCCAGATTCTGCAGCCCTTCAGTTTaGTTGCGCTCTGGTGACTGCAGGGAGCTCTCAGCCCTGCAACCT | + |
Preference number: 1 (lower is better) Translates to: WYLWTSGPRFCSPSV*LRSGDCRELSALQP Trigger: AGGTTGCAGGGCTGAGAGCTCCCTGCAGTCACCAGAGCGCAAGCAAACTGAAGGGCTGCAGAATCTGGGGCCAGATGTCCAGAGGTACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR GCA 90 bp | AGTCAGCATGGGCAGGAGCCACTTTCCCCACACGGCTGTCTTCAGTaGAGATGCTGGTACCTCTGGACATCTGGCCCCAGATTCTGCAGC | + |
Preference number: 1 (lower is better) Translates to: SQHGQEPLSPHGCLQ*RCWYLWTSGPRFCS Trigger: GCTGCAGAATCTGGGGCCAGATGTCCAGAGGTACCAGCATCTGCACTGAAGACAGCCGTGTGGGGAAAGTGGCTCCTGCCCATGCTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR TCA 90 bp | ATCTGCTTTGCAACCCAAGATGCAGTACCAGGACGCCTTAACCTCTaGGATGAACGGCGCGGGCTTCAGGGTCACAGAGCAGTGAGTCCG | + |
Preference number: 1 (lower is better) Translates to: ICFATQDAVPGRLNL*DERRGLQGHRAVSP Trigger: CGGACTCACTGCTCTGTGACCCTGAAGCCCGCGCCGTTCATCTCAGAGGTTAAGGCGTCCTGGTACTGCATCTTGGGTTGCAAAGCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR GCA 90 bp | GTTGTGGTAGATAATGGGTGCGAGGAGCCCGTAGCACTGGGTCACTaGTTGGAGGGCGAAGTTGGCGTCATTGAGGAAGTTGCTGAGCTC | + |
Preference number: 1 (lower is better) Translates to: VVVDNGCEEPVALGH*LEGEVGVIEEVAEL Trigger: GAGCTCAGCAACTTCCTCAATGACGCCAACTTCGCCCTCCAAGCAGTGACCCAGTGCTACGGGCTCCTCGCACCCATTATCTACCACAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR GCA 90 bp | GATCTGGATGACAGGTACCAAGACGATGTTGTGGTAGATAATGGGTaGGAGGAGCCCGTAGCACTGGGTCACTGCTTGGAGGGCGAAGTT | + |
Preference number: 1 (lower is better) Translates to: DLDDRYQDDVVVDNG*EEPVALGHCLEGEV Trigger: AACTTCGCCCTCCAAGCAGTGACCCAGTGCTACGGGCTCCTCGCACCCATTATCTACCACAACATCGTCTTGGTACCTGTCATCCAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR CCA 90 bp | GTCTGGCTCTCCAGCATACAGCCAGCCACTGTGGGACCATTAAGCTaGAATAGGCAGACTGGGAAGCTGAAAGTGGAACAGAGGTTACCG | + |
Preference number: 1 (lower is better) Translates to: VWLSSIQPATVGPLS*NRQTGKLKVEQRLP Trigger: CGGTAACCTCTGTTCCACTTTCAGCTTCCCAGTCTGCCTATTCCAGCTTAATGGTCCCACAGTGGCTGGCTGTATGCTGGAGAGCCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR CCA 90 bp | GTACATCCGAGCGGTGACAGCAGAGAGAGGCGGGTAAATGAGAATTaGTTTCGTTGTCTCCCCAATAGCATCACCAATGAGTTTCCCGCT | + |
Preference number: 1 (lower is better) Translates to: VHPSGDSRERRVNEN*FRCLPNSITNEFPA Trigger: AGCGGGAAACTCATTGGTGATGCTATTGGGGAGACAACGAAACCAATTCTCATTTACCCGCCTCTCTCTGCTGTCACCGCTCGGATGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR GCA 90 bp | AAGAGTTGCTGTGCTAGTGCTGTTTTATACGTGGCTGCGTGCGTGTaGACACAAGAGCCTTTACACCATCAGTCTCTAGAGCAGAGTGTC | + |
Preference number: 1 (lower is better) Translates to: KSCCASAVLYVAACV*TQEPLHHQSLEQSV Trigger: GACACTCTGCTCTAGAGACTGATGGTGTAAAGGCTCTTGTGTGCACACGCACGCAGCCACGTATAAAACAGCACTAGCACAGCAACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR GCA 90 bp | TCCAGAGCTACTAGCACATTCTCACACTCCACCAGTCTAGCGACTTaGTGGGCGGGGAAAATCTCGTTGCCTTTAATATTATCACAGAAG | + |
Preference number: 1 (lower is better) Translates to: SRATSTFSHSTSLAT*WAGKISLPLILSQK Trigger: CTTCTGTGATAATATTAAAGGCAACGAGATTTTCCCCGCCCAGCAAGTCGCTAGACTGGTGGAGTGTGAGAATGTGCTAGTAGCTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR CCA 90 bp | AGAGCTACTAGCACATTCTCACACTCCACCAGTCTAGCGACTTGCTaGGCGGGGAAAATCTCGTTGCCTTTAATATTATCACAGAAGAGA | + |
Preference number: 1 (lower is better) Translates to: RATSTFSHSTSLATC*AGKISLPLILSQKR Trigger: TCTCTTCTGTGATAATATTAAAGGCAACGAGATTTTCCCCGCCCAGCAAGTCGCTAGACTGGTGGAGTGTGAGAATGTGCTAGTAGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR TCA 90 bp | GTTCATCATCAGTTGCGTGATGCTGACAGAGTATTTCTGCAATTATaGAGAGTTGCTGTGCTAGTGCTGTTTTATACGTGGCTGCGTGCG | + |
Preference number: 1 (lower is better) Translates to: VHHQLRDADRVFLQL*RVAVLVLFYTWLRA Trigger: CGCACGCAGCCACGTATAAAACAGCACTAGCACAGCAACTCTTCATAATTGCAGAAATACTCTGTCAGCATCACGCAACTGATGATGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR TCA 90 bp | TTTAATTTCAAAGAAGCTTCTGCCATCGGCTGGTATCGCTTCTCCTaGGTTTGGGAGGTGGTTGTTGTTCAGCCTTACTTTCCCATAGCT | + |
Preference number: 1 (lower is better) Translates to: FNFKEASAIGWYRFS*VWEVVVVQPYFPIA Trigger: AGCTATGGGAAAGTAAGGCTGAACAACAACCACCTCCCAAACTCAGGAGAAGCGATACCAGCCGATGGCAGAAGCTTCTTTGAAATTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR GCA 90 bp | CAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATaGTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCT | + |
Preference number: 1 (lower is better) Translates to: QKACSLSSYQSNVTP*SLTSSGLRCTPHFS Trigger: AGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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3UTR TCA 90 bp | ATTTATCTTTTCAGGCAGCAGCACCTGCTGTGGCTTCTTGGTTCTTaGAGTTTTCTTAGAACAAACACCCTCCTCTGCAGTTTCCTCTTG | + |
Preference number: 1 (lower is better) Translates to: IYLFRQQHLLWLLGS*SFLRTNTLLCSFLL Trigger: CAAGAGGAAACTGCAGAGGAGGGTGTTTGTTCTAAGAAAACTTCAAGAACCAAGAAGCCACAGCAGGTGCTGCTGCCTGAAAAGATAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR GCA 90 bp | ACCAGAATGTGGGGCAAGCCTCTGTTTATTAGCTCTTCAAGTGCCTaGATGTTGTCTTTATGGGTGAGAGGTTTTCCAGAATCGAATGAT | + |
Preference number: 1 (lower is better) Translates to: TRMWGKPLFISSSSA*MLSLWVRGFPESND Trigger: ATCATTCGATTCTGGAAAACCTCTCACCCATAAAGACAACATGCAGGCACTTGAAGAGCTAATAAACAGAGGCTTGCCCCACATTCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR GCA 90 bp | CTTGAAGTTTTCTTAGAACAAACACCCTCCTCTGCAGTTTCCTCTTaGTCAATACCAAAAAGAGACCTGCACCCTGATGTGATATCCAGC | + |
Preference number: 1 (lower is better) Translates to: LEVFLEQTPSSAVSS*SIPKRDLHPDVISS Trigger: GCTGGATATCACATCAGGGTGCAGGTCTCTTTTTGGTATTGAGCAAGAGGAAACTGCAGAGGAGGGTGTTTGTTCTAAGAAAACTTCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR TCA 90 bp | ATCAGCTTCTTAGACGGTCAGTCCAGCCCTCAACACTGTCTCAGATaGTGCTACTTTCAAAGAAGTAAACCTCCTTTGTCTTGCTTTTAT | + |
Preference number: 1 (lower is better) Translates to: ISFLDGQSSPQHCLR*CYFQRSKPPLSCFY Trigger: ATAAAAGCAAGACAAAGGAGGTTTACTTCTTTGAAAGTAGCATCATCTGAGACAGTGTTGAGGGCTGGACTGACCGTCTAAGAAGCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR TCA 90 bp | TTGTTGTGTGACACGAAATCAAACCTAGTTGTCACTGATATTCTATaGTTGTCACCAAGAAGGTCTGCATGGTCTTTGTCCCCTTGCTCT | + |
Preference number: 1 (lower is better) Translates to: LLCDTKSNLVVTDIL*LSPRRSAWSLSPCS Trigger: AGAGCAAGGGGACAAAGACCATGCAGACCTTCTTGGTGACAATCATAGAATATCAGTGACAACTAGGTTTGATTTCGTGTCACACAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR GCA 90 bp | CAATCAAATGTCACTCCATGCTCTCTTACTTCATCAGGCCTGAGATaGACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGC | + |
Preference number: 1 (lower is better) Translates to: QSNVTPCSLTSSGLR*TPHFSTSLTLVHTS Trigger: GCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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3UTR GCA 90 bp | GGTCATACTCCTTCCAGGAACGTAGAATCTTTGTCATGTAGAAGATaGAGCAAGCTATCATGTGCTGTATACTTTCAAAGCTGGAGATAT | + |
Preference number: 1 (lower is better) Translates to: GHTPSRNVESLSCRR*SKLSCAVYFQSWRY Trigger: ATATCTCCAGCTTTGAAAGTATACAGCACATGATAGCTTGCTGCATCTTCTACATGACAAAGATTCTACGTTCCTGGAAGGAGTATGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR GCA 90 bp | GCCAATCTCGATCACTATGGCTTTAAACTTACTGGGAGACTTGAGTaGCCTCCTAGAAATGACAGTCTCCTTATATTTTATCCTTTTCAC | + |
Preference number: 1 (lower is better) Translates to: ANLDHYGFKLTGRLE*PPRNDSLLIFYPFH Trigger: GTGAAAAGGATAAAATATAAGGAGACTGTCATTTCTAGGAGGGCACTCAAGTCTCCCAGTAAGTTTAAAGCCATAGTGATCGAGATTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR CCA 90 bp | CACTGGATCACACCACTATTAACACGTGACACTAGGATTTCAACTTaGGTCCACCAGAAAACAGAACTCATAGACACTGTTCATTATGTA | + |
Preference number: 1 (lower is better) Translates to: HWITPLLTRDTRIST*VHQKTELIDTVHYV Trigger: TACATAATGAACAGTGTCTATGAGTTCTGTTTTCTGGTGGACCCAAGTTGAAATCCTAGTGTCACGTGTTAATAGTGGTGTGATCCAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR TCA 90 bp | AAAAGGTACAAGAGGATCGAAGAAGTGTCTGCCAAGATGTTGGAATaGAGCCTTTTCTGCGTTATTGTCATGATGTTGCTTAGACAGATA | + |
Preference number: 1 (lower is better) Translates to: KRYKRIEEVSAKMLE*SLFCVIVMMLLRQI Trigger: TATCTGTCTAAGCAACATCATGACAATAACGCAGAAAAGGCTTCATTCCAACATCTTGGCAGACACTTCTTCGATCCTCTTGTACCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR TCA 90 bp | GGGTTTGCTCCTCTCAGTAATAAATTGGTAGTACATTATTTTTGGTaGAGGATCGGGAATACAGTTGATTGTCGCAGCCAAACTTATGAA | + |
Preference number: 1 (lower is better) Translates to: GFAPLSNKLVVHYFW*RIGNTVDCRSQTYE Trigger: TTCATAAGTTTGGCTGCGACAATCAACTGTATTCCCGATCCTTCACCAAAAATAATGTACTACCAATTTATTACTGAGAGGAGCAAACCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR GCA 90 bp | AAAGATATTTCTGAGGAAAAGGTACAAGAGGATCGAAGAAGTGTCTaGCAAGATGTTGGAATGAAGCCTTTTCTGCGTTATTGTCATGAT | + |
Preference number: 1 (lower is better) Translates to: KDISEEKVQEDRRSV*QDVGMKPFLRYCHD Trigger: ATCATGACAATAACGCAGAAAAGGCTTCATTCCAACATCTTGGCAGACACTTCTTCGATCCTCTTGTACCTTTTCCTCAGAAATATCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR GCA 90 bp | AAGTTCAGAGCTTCAGGCTTGATACACAGCAGTCTACCACTCAACTaGATTAAACCAGAAGTACACAATCTTTACATATACATGTACATA | + |
Preference number: 1 (lower is better) Translates to: KFRASGLIHSSLPLN*IKPEVHNLYIYMYI Trigger: TATGTACATGTATATGTAAAGATTGTGTACTTCTGGTTTAATGCAGTTGAGTGGTAGACTGCTGTGTATCAAGCCTGAAGCTCTGAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR CCA 90 bp | ACAGGGAAAAGTTGGCATCATTACTTCATTTTATATATGTATCACTaGATCACACCACTATTAACACGTGACACTAGGATTTCAACTTGG | + |
Preference number: 1 (lower is better) Translates to: TGKSWHHYFILYMYH*ITPLLTRDTRISTW Trigger: CCAAGTTGAAATCCTAGTGTCACGTGTTAATAGTGGTGTGATCCAGTGATACATATATAAAATGAAGTAATGATGCCAACTTTTCCCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR-3UTR CCA 90 bp | GAGCCCGTAGCACTGGGTCACTGCTTGGAGGGCGAAGTTGGCGTCATTGAGGAATCCGGGCCAGCAGGATaGGTGGGGGAGGAATTCTGC | + |
Preference number: 2 (lower is better) Translates to: EPVALGHCLEGEVGVIEESGPAG*VGEEFC Trigger: GCAGAATTCCTCCCCCACCCATCCTGCTGGCCCGGA...TTCCTCAATGACGCCAACTTCGCCCTCCAAGCAGTGACCCAGTGCTACGGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR CAA 90 bp | TACCTCTGGACATCTGGCCCCAGATTCTGCAGCCCTTCAGTTTGCTaGCGCTCTGGTGACTGCAGGGAGCTCTCAGCCCTGCAACCTCCG | + |
Preference number: 2 (lower is better) Translates to: YLWTSGPRFCSPSVC*RSGDCRELSALQPP Trigger: CGGAGGTTGCAGGGCTGAGAGCTCCCTGCAGTCACCAGAGCGCAAGCAAACTGAAGGGCTGCAGAATCTGGGGCCAGATGTCCAGAGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR-3UTR GCA 90 bp | GCTGCCAGGTGTAGCCTAGCCTCCACCATGATCTCCAGCTCCAAAACAGAGGACGGCCTGTGGCACTGGTaGTCTGTCTCCGACAGCAGG | + |
Preference number: 2 (lower is better) Translates to: AARCSLASTMISSSKTEDGLWHW*SVSDSR Trigger: CCTGCTGTCGGAGACAGAGCACCAGTGCCACAGGCC...GTCCTCTGTTTTGGAGCTGGAGATCATGGTGGAGGCTAGGCTACACCTGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR-3UTR CCA 90 bp | CTTCATTCGGCCGCGAGATGGCGAGGAGCTAAGTCAAGCACACTTCTGAGTGACGGAGGGCAGTCAGCATaGGCAGGAGCCACTTTCCCC | + |
Preference number: 2 (lower is better) Translates to: LHSAARWRGAKSSTLLSDGGQSA*AGATFP Trigger: GGGGAAAGTGGCTCCTGCCCATGCTGACTGCCCTCC...GTCACTCAGAAGTGTGCTTGACTTAGCTCCTCGCCATCTCGCGGCCGAATGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR CAA 90 bp | GTGGTAGATAATGGGTGCGAGGAGCCCGTAGCACTGGGTCACTGCTaGGAGGGCGAAGTTGGCGTCATTGAGGAAGTTGCTGAGCTCCAG | + |
Preference number: 2 (lower is better) Translates to: VVDNGCEEPVALGHC*EGEVGVIEEVAELQ Trigger: CTGGAGCTCAGCAACTTCCTCAATGACGCCAACTTCGCCCTCCAAGCAGTGACCCAGTGCTACGGGCTCCTCGCACCCATTATCTACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR CAA 90 bp | AGTTACCTTGTTCTGAGGCTTCAGGCATCTTCATCTGAGAAGCTGTaGGGGTGTCTGGCTCTCCAGCATACAGCCAGCCACTGTGGGACC | + |
Preference number: 2 (lower is better) Translates to: SYLVLRLQASSSEKL*GCLALQHTASHCGT Trigger: GGTCCCACAGTGGCTGGCTGTATGCTGGAGAGCCAGACACCCCAACAGCTTCTCAGATGAAGATGCCTGAAGCCTCAGAACAAGGTAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR-3UTR CCA 90 bp | GCTGCCAGGTGTAGCCTAGCCTCCACCATGATCTCCAGCTCCAAAACAGAGGACTTATCTTTCAGGTTTTaGGGGGTGGGTTTGCTCCTC | + |
Preference number: 2 (lower is better) Translates to: AARCSLASTMISSSKTEDLSFRF*GVGLLL Trigger: GAGGAGCAAACCCACCCCCCAAAACCTGAAAGATAA...GTCCTCTGTTTTGGAGCTGGAGATCATGGTGGAGGCTAGGCTACACCTGGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR-3UTR GCA 90 bp | GCTGCCAGGTGTAGCCTAGCCTCCACCATGATCTCCAGCTCCAAAACAGAGGACAGCTCTTCAAGTGCCTaGATGTTGTCTTTATGGGTG | + |
Preference number: 2 (lower is better) Translates to: AARCSLASTMISSSKTEDSSSSA*MLSLWV Trigger: CACCCATAAAGACAACATGCAGGCACTTGAAGAGCT...GTCCTCTGTTTTGGAGCTGGAGATCATGGTGGAGGCTAGGCTACACCTGGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR-3UTR GCA 90 bp | AGGCAGAGAACATGGTTTCCCTCTTCTTCTAGCTTTGAGACCAAAAGACCAAATGGGAGCTCTCAGCCCTaGAACCTCCGGCTGGGCTGT | + |
Preference number: 2 (lower is better) Translates to: RQRTWFPSSSSFETKRPNGSSQP*NLRLGC Trigger: ACAGCCCAGCCGGAGGTTGCAGGGCTGAGAGCTCCC...ATTTGGTCTTTTGGTCTCAAAGCTAGAAGAAGAGGGAAACCATGTTCTCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR-3UTR CCA 90 bp | TCCAGGGGACTCACCTGTATGCTGGCCTGTATCTCTGCAGGGCGATTGCTGCCAAGGTTAACCAGAATGTaGGGCAAGCCTCTGTTTATT | + |
Preference number: 2 (lower is better) Translates to: SRGLTCMLACISAGRLLPRLTRM*GKPLFI Trigger: AATAAACAGAGGCTTGCCCCACATTCTGGTTAACCT...TGGCAGCAATCGCCCTGCAGAGATACAGGCCAGCATACAGGTGAGTCCCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR-3UTR TCA 90 bp | CATAATCTATCCTCATATAGTGACCTATCCTCAGAGGCTAGAAGGATGCCTAGCCCGACAGCAGGGAGTTaGCCTTCTCCTCTGCCTCCA | + |
Preference number: 2 (lower is better) Translates to: HNLSSYSDLSSEARRMPSPTAGS*PSPLPP Trigger: TGGAGGCAGAGGAGAAGGTCAACTCCCTGCTGTCGG...GCTAGGCATCCTTCTAGCCTCTGAGGATAGGTCACTATATGAGGATAGATTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR-3UTR TCA 90 bp | ATGATGGAAATTAAGTTCAGAGCTTCAGGCTTGATACACAGCAGTCTACCACTCGAGAGGATGGGGGAATaGGGGGATGACAGGGTGGGT | + |
Preference number: 2 (lower is better) Translates to: MMEIKFRASGLIHSSLPLERMGE*GDDRVG Trigger: ACCCACCCTGTCATCCCCTCATTCCCCCATCCTCTC...GAGTGGTAGACTGCTGTGTATCAAGCCTGAAGCTCTGAACTTAATTTCCATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR-3UTR TCA 90 bp | AGGTCTGCATGGTCTTTGTCCCCTTGCTCTTCTAAGTTTATTTGTGACAGCCTTTCGGCTGAGCGTGCATaGAGAGAGGTGGAAGGAGGA | + |
Preference number: 2 (lower is better) Translates to: RSAWSLSPCSSKFICDSLSAERA*REVEGG Trigger: TCCTCCTTCCACCTCTCTTCATGCACGCTCAGCCGA...AAGGCTGTCACAAATAAACTTAGAAGAGCAAGGGGACAAAGACCATGCAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR-3UTR CCA 90 bp | GCTTTAAACTTACTGGGAGACTTGAGTGCCCTCCTAGAAATGACAGTCTCCTTAGGCCAGCAGGATGGGTaGGGGAGGAATTCTGCTCTT | + |
Preference number: 2 (lower is better) Translates to: ALNLLGDLSALLEMTVSLGQQDG*GRNSAL Trigger: AAGAGCAGAATTCCTCCCCCACCCATCCTGCTGGCC...TAAGGAGACTGTCATTTCTAGGAGGGCACTCAAGTCTCCCAGTAAGTTTAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR-3UTR GCA 90 bp | GGTATCGCTTCTCCTGAGTTTGGGAGGTGGTTGTTGTTCAGCCTTACTTTCCCAAGCTTCCATCTGCTTTaGAACCCAAGATGCAGTACC | + |
Preference number: 2 (lower is better) Translates to: GIASPEFGRWLLFSLTFPSFHLL*NPRCST Trigger: GGTACTGCATCTTGGGTTGCAAAGCAGATGGAAGCT...TGGGAAAGTAAGGCTGAACAACAACCACCTCCCAAACTCAGGAGAAGCGATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR-3UTR CCA 90 bp | ATGATGGAAATTAAGTTCAGAGCTTCAGGCTTGATACACAGCAGTCTACCACTCAGGGATGTGAGAGGATaGGGGAGAAGGAGTGAGGGG | + |
Preference number: 2 (lower is better) Translates to: MMEIKFRASGLIHSSLPLRDVRG*GRRSEG Trigger: CCCCTCACTCCTTCTCCCCCATCCTCTCACATCCCT...GAGTGGTAGACTGCTGTGTATCAAGCCTGAAGCTCTGAACTTAATTTCCATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR-3UTR CCA 90 bp | CACTTGTGGTGGTTAACTTTTAGTGTTACTTCTCATCATCAGCTTCATTCGGCCGTACCTCTGGACATCTaGCCCCAGATTCTGCAGCCC | + |
Preference number: 2 (lower is better) Translates to: HLWWLTFSVTSHHQLHSAVPLDI*PQILQP Trigger: GGGCTGCAGAATCTGGGGCCAGATGTCCAGAGGTAC...GGCCGAATGAAGCTGATGATGAGAAGTAACACTAAAAGTTAACCACCACAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
||
3UTR CAA 90 bp | TTTCAAAGAAGCTTCTGCCATCGGCTGGTATCGCTTCTCCTGAGTTaGGGAGGTGGTTGTTGTTCAGCCTTACTTTCCCATAGCTTCCAT | + |
Preference number: 2 (lower is better) Translates to: FQRSFCHRLVSLLLS*GGGCCSALLSHSFH Trigger: ATGGAAGCTATGGGAAAGTAAGGCTGAACAACAACCACCTCCCAAACTCAGGAGAAGCGATACCAGCCGATGGCAGAAGCTTCTTTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR GCA 90 bp | GAAGTTTTCTTAGAACAAACACCCTCCTCTGCAGTTTCCTCTTGCTCAATACCAGTGGTAGATAATGGGTaGGAGGAGCCCGTAGCACTG | + |
Preference number: 2 (lower is better) Translates to: EVFLEQTPSSAVSSCSIPVVDNG*EEPVAL Trigger: CAGTGCTACGGGCTCCTCGCACCCATTATCTACCAC...TGGTATTGAGCAAGAGGAAACTGCAGAGGAGGGTGTTTGTTCTAAGAAAACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR CCA 90 bp | TTTACACCATCAGTCTCTAGAGCAGAGTGTCACAGTGAGCTAGCTAAGGAAAGACAAATGACAGAGCATTaGGGCTCTCAGAGTAGGGGG | + |
Preference number: 2 (lower is better) Translates to: FTPSVSRAECHSELAKERQMTEH*GSQSRG Trigger: CCCCCTACTCTGAGAGCCCCAATGCTCTGTCATTTG...TCTTTCCTTAGCTAGCTCACTGTGACACTCTGCTCTAGAGACTGATGGTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
3UTR-3UTR GCA 90 bp | AACAAACACCCTCCTCTGCAGTTTCCTCTTGCTCAATACCAAAAAGAGACCTGCCCCATAGCTTCCATCTaGTTTGCAACCCAAGATGCA | + |
Preference number: 2 (lower is better) Translates to: NKHPPLQFPLAQYQKETCPIASI*FATQDA Trigger: TGCATCTTGGGTTGCAAAGCAGATGGAAGCTATGGG...GCAGGTCTCTTTTTGGTATTGAGCAAGAGGAAACTGCAGAGGAGGGTGTTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR GCA 90 bp | ATTCTAGCGCTGTTAGTTAAGTCTGCCTCAGTAGAGATCAAGTGTGAGATTCAACACGGCTGTCTTCAGTaGAGATGCTGGTACCTCTGG | + |
Preference number: 2 (lower is better) Translates to: ILALLVKSASVEIKCEIQHGCLQ*RCWYLW Trigger: CCAGAGGTACCAGCATCTGCACTGAAGACAGCCGTG...TTGAATCTCACACTTGATCTCTACTGAGGCAGACTTAACTAACAGCGCTAGAAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
||
3UTR-3UTR GCA 90 bp | TCTCCTTTTCAAGAAGTCATAAACAGGGGCAGATATCTCCACCATGAGATGAAATCAGGCAGCAGCACCTaGTGTGGCTTCTTGGTTCTT | + |
Preference number: 2 (lower is better) Translates to: SPFQEVINRGRYLHHEMKSGSST*CGFLVL Trigger: AAGAACCAAGAAGCCACAGCAGGTGCTGCTGCCTGA...TTTCATCTCATGGTGGAGATATCTGCCCCTGTTTATGACTTCTTGAAAAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR CAA 90 bp | AGCTGTTCATTTATCTTTTCAGGCAGCAGCACCTGCTGTGGCTTCTaGGTTCTTGAAGTTTTCTTAGAACAAACACCCTCCTCTGCAGTT | + |
Preference number: 2 (lower is better) Translates to: SCSFIFSGSSTCCGF*VLEVFLEQTPSSAV Trigger: AACTGCAGAGGAGGGTGTTTGTTCTAAGAAAACTTCAAGAACCAAGAAGCCACAGCAGGTGCTGCTGCCTGAAAAGATAAATGAACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR CAA 90 bp | TCCTCCGATCCGGATAGTTCAGCTGAGTTGATTTGCTTTGTCGTCTaGAGTAGATGTGTCTCCAACAAGGCCAGCTGTTCATTTATCTTT | + |
Preference number: 2 (lower is better) Translates to: SSDPDSSAELICFVV*SRCVSNKASCSFIF Trigger: AAAGATAAATGAACAGCTGGCCTTGTTGGAGACACATCTACTCAAGACGACAAAGCAAATCAACTCAGCTGAACTATCCGGATCGGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR TCA 90 bp | GTCTCAGATGATGCTACTTTCAAAGAAGTAAACCTCCTTTGTCTTGCTTTTATTGGGGGAATGAGGGGATaGCAGGGTGGGTATGGAGAA | + |
Preference number: 2 (lower is better) Translates to: VSDDATFKEVNLLCLAFIGGMRG*QGGYGE Trigger: TTCTCCATACCCACCCTGTCATCCCCTCATTCCCCC...AATAAAAGCAAGACAAAGGAGGTTTACTTCTTTGAAAGTAGCATCATCTGAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
3UTR-3UTR TCA 90 bp | GAAGTTTTCTTAGAACAAACACCCTCCTCTGCAGTTTCCTCTTGCTCAATACCAACCTGCACCCTGATGTaGTATCCAGCATCTTTTTCC | + |
Preference number: 2 (lower is better) Translates to: EVFLEQTPSSAVSSCSIPTCTLM*YPASFS Trigger: GGAAAAAGATGCTGGATATCACATCAGGGTGCAGGT...TGGTATTGAGCAAGAGGAAACTGCAGAGGAGGGTGTTTGTTCTAAGAAAACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR CCA 90 bp | GTCTCAGATGATGCTACTTTCAAAGAAGTAAACCTCCTTTGTCTTGCTTTTATTGAGGGGATGACAGGGTaGGTATGGAGAAGGAGAGGG | + |
Preference number: 2 (lower is better) Translates to: VSDDATFKEVNLLCLAFIEGMTG*VWRRRG Trigger: CCCTCTCCTTCTCCATACCCACCCTGTCATCCCCTC...AATAAAAGCAAGACAAAGGAGGTTTACTTCTTTGAAAGTAGCATCATCTGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
3UTR-3UTR TCA 90 bp | GTATTAGTCACTGTAGATATCCCAGTTCTAAGTATTTGCTTGTATCAGGCTCTTGGCAGACTGGGAAGCTaGAAGTGGAACAGAGGTTAC | + |
Preference number: 2 (lower is better) Translates to: VLVTVDIPVLSICLYQALGRLGS*KWNRGY Trigger: GTAACCTCTGTTCCACTTTCAGCTTCCCAGTCTGCC...AAGAGCCTGATACAAGCAAATACTTAGAACTGGGATATCTACAGTGACTAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
||
3UTR-3UTR GCA 90 bp | AACAAACACCCTCCTCTGCAGTTTCCTCTTGCTCAATACCAAAAAGAGACCTGCTTGTCATGTAGAAGATaGAGCAAGCTATCATGTGCT | + |
Preference number: 2 (lower is better) Translates to: NKHPPLQFPLAQYQKETCLSCRR*SKLSCA Trigger: AGCACATGATAGCTTGCTGCATCTTCTACATGACAA...GCAGGTCTCTTTTTGGTATTGAGCAAGAGGAAACTGCAGAGGAGGGTGTTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR TCA 90 bp | GGAGACTTGAGTGCCCTCCTAGAAATGACAGTCTCCTTATATTTTATCCTTTTCAGAGAGGCGGGTAAATaGGAATTGGTTTCGTTGTCT | + |
Preference number: 2 (lower is better) Translates to: GDLSALLEMTVSLYFILFREAGK*ELVSLS Trigger: AGACAACGAAACCAATTCTCATTTACCCGCCTCTCT...GAAAAGGATAAAATATAAGGAGACTGTCATTTCTAGGAGGGCACTCAAGTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR-3UTR GCA 90 bp | AACAGGGGCAGATATCTCCACCATGAGATGAAACTTCTCATCGTTCATGCATTTGTGGGGGAGGAATTCTaGTCTTCTTTATTTTTGAGC | + |
Preference number: 2 (lower is better) Translates to: NRGRYLHHEMKLLIVHAFVGEEF*SSLFLS Trigger: GCTCAAAAATAAAGAAGAGCAGAATTCCTCCCCCAC...AAATGCATGAACGATGAGAAGTTTCATCTCATGGTGGAGATATCTGCCCCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR GCA 90 bp | TTGCTTAAATTTCATGACTTCCTTCATGGCGCCCTTCACCGTCCAGTTCAAAACCAGCAAGCTATCATGTaGTGTATACTTTCAAAGCTG | + |
Preference number: 2 (lower is better) Translates to: LLKFHDFLHGALHRPVQNQQAIM*CILSKL Trigger: CAGCTTTGAAAGTATACAGCACATGATAGCTTGCTG...GTTTTGAACTGGACGGTGAAGGGCGCCATGAAGGAAGTCATGAAATTTAAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR CAA 90 bp | GCATTTGAGCATAATTTGTGTAAAGAATTCCAGGAATCTTGGTCTTaGCTTAAATTTCATGACTTCCTTCATGGCGCCCTTCACCGTCCA | + |
Preference number: 2 (lower is better) Translates to: AFEHNLCKEFQESWS*LKFHDFLHGALHRP Trigger: TGGACGGTGAAGGGCGCCATGAAGGAAGTCATGAAATTTAAGCAAAGACCAAGATTCCTGGAATTCTTTACACAAATTATGCTCAAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR GCA 90 bp | CATAATCTATCCTCATATAGTGACCTATCCTCAGAGGCTAGAAGGATGCCTAGCGCAATTATGAAGAGTTaGTGTGCTAGTGCTGTTTTA | + |
Preference number: 2 (lower is better) Translates to: HNLSSYSDLSSEARRMPSAIMKS*CASAVL Trigger: TAAAACAGCACTAGCACAGCAACTCTTCATAATTGC...GCTAGGCATCCTTCTAGCCTCTGAGGATAGGTCACTATATGAGGATAGATTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
3UTR-3UTR CCA 90 bp | GGAGACTTGAGTGCCCTCCTAGAAATGACAGTCTCCTTATATTTTATCCTTTTCCGGGTAAATGAGAATTaGTTTCGTTGTCTCCCCAAT | + |
Preference number: 2 (lower is better) Translates to: GDLSALLEMTVSLYFILFRVNEN*FRCLPN Trigger: ATTGGGGAGACAACGAAACCAATTCTCATTTACCCG...GAAAAGGATAAAATATAAGGAGACTGTCATTTCTAGGAGGGCACTCAAGTCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR CCA 90 bp | AAGTATCCACACACAGTGAGGACAAGGATAACATCAGTTACACTTAGATACCCCACTAGGATTTCAACTTaGGTCCACCAGAAAACAGAA | + |
Preference number: 2 (lower is better) Translates to: KYPHTVRTRITSVTLRYPTRIST*VHQKTE Trigger: TTCTGTTTTCTGGTGGACCCAAGTTGAAATCCTAGT...GGGGTATCTAAGTGTAACTGATGTTATCCTTGTCCTCACTGTGTGTGGATACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
||
3UTR-3UTR TCA 90 bp | AGGATTTCAACTTGGGTCCACCAGAAAACAGAACTCATAGACACTGTTCATTATTTAGTTACCTTGTTCTaGGGCTTCAGGCATCTTCAT | + |
Preference number: 2 (lower is better) Translates to: RISTWVHQKTELIDTVHYLVTLF*GFRHLH Trigger: ATGAAGATGCCTGAAGCCTCAGAACAAGGTAACTAA...ATAATGAACAGTGTCTATGAGTTCTGTTTTCTGGTGGACCCAAGTTGAAATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
||
3UTR-3UTR TCA 90 bp | TATCACTTTGCTTATCCAAGATTTTACTCAGTGGGGATAAGCTTACAAATTTGCAAGCACACTTCTGAGTaGCCTGTGAAGGGGTTTCTA | + |
Preference number: 2 (lower is better) Translates to: YHFAYPRFYSVGISLQICKHTSE*PVKGFL Trigger: TAGAAACCCCTTCACAGGTCACTCAGAAGTGTGCTT...GCAAATTTGTAAGCTTATCCCCACTGAGTAAAATCTTGGATAAGCAAAGTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR-3UTR GCA 90 bp | TTTACACCATCAGTCTCTAGAGCAGAGTGTCACAGTGAGCTAGCTAAGGAAAGATTTGATACAACTCTGTaGATTAAAGCAATCAGCTTC | + |
Preference number: 2 (lower is better) Translates to: FTPSVSRAECHSELAKERFDTTL*IKAISF Trigger: GAAGCTGATTGCTTTAATGCACAGAGTTGTATCAAA...TCTTTCCTTAGCTAGCTCACTGTGACACTCTGCTCTAGAGACTGATGGTGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR-3UTR TCA 90 bp | GGAGACTTGAGTGCCCTCCTAGAAATGACAGTCTCCTTATATTTTATCCTTTTCTGGCTTCTTGGTTCTTaGAGTTTTCTTAGAACAAAC | + |
Preference number: 2 (lower is better) Translates to: GDLSALLEMTVSLYFILFWLLGS*SFLRTN Trigger: GTTTGTTCTAAGAAAACTTCAAGAACCAAGAAGCCA...GAAAAGGATAAAATATAAGGAGACTGTCATTTCTAGGAGGGCACTCAAGTCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR-3UTR CCA 90 bp | GACTTGAGTGCCCTCCTAGAAATGACAGTCTCCTTATATTTTATCCTTTTCACTCATTTTATCAAGATCTaGATGACAGGTACCAAGACG | + |
Preference number: 2 (lower is better) Translates to: DLSALLEMTVSLYFILFTHFIKI*MTGTKT Trigger: CGTCTTGGTACCTGTCATCCAGATCTTGATAAAATG...AGTGAAAAGGATAAAATATAAGGAGACTGTCATTTCTAGGAGGGCACTCAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR-3UTR CCA 90 bp | CTGAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTAATTCTTTAAAGATATaGAGCAAGCAGGTGGTGAAG | + |
Preference number: 2 (lower is better) Translates to: LRCTPHFSTSLTLVHTSSNSLKI*SKQVVK Trigger: CTTCACCACCTGCTTGCTCCATATCTTTAAAGAATT...ACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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3UTR-3UTR CCA 90 bp | AGGATTTCAACTTGGGTCCACCAGAAAACAGAACTCATAGACACTGTTCATTATACTGACCACTTGTGGTaGTTAACTTTTAGTGTTACT | + |
Preference number: 2 (lower is better) Translates to: RISTWVHQKTELIDTVHYTDHLW*LTFSVT Trigger: AGTAACACTAAAAGTTAACCACCACAAGTGGTCAGT...ATAATGAACAGTGTCTATGAGTTCTGTTTTCTGGTGGACCCAAGTTGAAATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR-3UTR CCA 90 bp | TTGTCCCCTTGCTCTTCTAAGTTTATTTGTGACAGCCTTTGCACAGCAGTATTTATTACTGACCACTTGTaGTGGTTAACTTTTAGTGTT | + |
Preference number: 2 (lower is better) Translates to: LSPCSSKFICDSLCTAVFITDHL*WLTFSV Trigger: AACACTAAAAGTTAACCACCACAAGTGGTCAGTAAT...AAATACTGCTGTGCAAAGGCTGTCACAAATAAACTTAGAAGAGCAAGGGGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR-3UTR TCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAATTTCTAACAAAAAGATaGGTAACAATGAAGTCCCCC | + |
Preference number: 2 (lower is better) Translates to: HTSFFYFTHFSTYQQCYEFLTKR*VTMKSP Trigger: GGGGGACTTCATTGTTACTCATCTTTTTGTTAGAAA...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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3UTR-3UTR CCA 90 bp | GTCTCAGATGATGCTACTTTCAAAGAAGTAAACCTCCTTTGTCTTGCTTTTATTTGCATGTTGTCTTTATaGGTGAGAGGTTTTCCAGAA | + |
Preference number: 2 (lower is better) Translates to: VSDDATFKEVNLLCLAFICMLSL*VRGFPE Trigger: TTCTGGAAAACCTCTCACCCATAAAGACAACATGCA...AATAAAAGCAAGACAAAGGAGGTTTACTTCTTTGAAAGTAGCATCATCTGAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR TCA 72 bp | GAGATGAACGGCGCGGGCTTCAGGGTCACAGAGCAGTaGGTCCGGGCCAGCAGGATGGGTGGGGGAGGAATT | + |
Preference number: 3 (lower is better) Translates to: EMNGAGFRVTEQ*VRASRMGGGGI Trigger: AATTCCTCCCCCACCCATCCTGCTGGCCCGGACTCACTGCTCTGTGACCCTGAAGCCCGCGCCGTTCATCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR TCA 72 bp | CAGATTCTGCAGCCCTTCAGTTTGCTTGCGCTCTGGTaGCTGCAGGGAGCTCTCAGCCCTGCAACCTCCGGC | + |
Preference number: 3 (lower is better) Translates to: QILQPFSLLALW*LQGALSPATSG Trigger: GCCGGAGGTTGCAGGGCTGAGAGCTCCCTGCAGTCACCAGAGCGCAAGCAAACTGAAGGGCTGCAGAATCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR GCA 72 bp | GGGAGTGCTCCTCCTCTTCCAGGGGACTCACCTGTATaGTGGCCTGTATCTCTGCAGGGCGATTGCTGCCAG | + |
Preference number: 3 (lower is better) Translates to: GSAPPLPGDSPV*WPVSLQGDCCQ Trigger: CTGGCAGCAATCGCCCTGCAGAGATACAGGCCAGCATACAGGTGAGTCCCCTGGAAGAGGAGGAGCACTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR GCA 72 bp | GGGCAGGAGCCACTTTCCCCACACGGCTGTCTTCAGTaGAGATGCTGGTACCTCTGGACATCTGGCCCCAGA | + |
Preference number: 3 (lower is better) Translates to: GQEPLSPHGCLQ*RCWYLWTSGPR Trigger: TCTGGGGCCAGATGTCCAGAGGTACCAGCATCTGCACTGAAGACAGCCGTGTGGGGAAAGTGGCTCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR-3UTR CAA 90 bp | TCCAGGGGACTCACCTGTATGCTGGCCTGTATCTCTGCAGGGCGATTGCTGCCATCCGACAGCAGGGAGTaGACCTTCTCCTCTGCCTCC | + |
Preference number: 3 (lower is better) Translates to: SRGLTCMLACISAGRLLPSDSRE*TFSSAS Trigger: GGAGGCAGAGGAGAAGGTCAACTCCCTGCTGTCGGA...TGGCAGCAATCGCCCTGCAGAGATACAGGCCAGCATACAGGTGAGTCCCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR GCA 72 bp | TTCCAGGGGACTCACCTGTATGCTGGCCTGTATCTCTaGAGGGCGATTGCTGCCAGGTGTAGCCTAGCCTCC | + |
Preference number: 3 (lower is better) Translates to: FQGTHLYAGLYL*RAIAARCSLAS Trigger: GGAGGCTAGGCTACACCTGGCAGCAATCGCCCTGCAGAGATACAGGCCAGCATACAGGTGAGTCCCCTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR GCA 72 bp | TGGACATCTGGCCCCAGATTCTGCAGCCCTTCAGTTTaGTTGCGCTCTGGTGACTGCAGGGAGCTCTCAGCC | + |
Preference number: 3 (lower is better) Translates to: WTSGPRFCSPSV*LRSGDCRELSA Trigger: GGCTGAGAGCTCCCTGCAGTCACCAGAGCGCAAGCAAACTGAAGGGCTGCAGAATCTGGGGCCAGATGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR CCA 72 bp | AGTGCTCCTCCTCTTCCAGGGGACTCACCTGTATGCTaGCCTGTATCTCTGCAGGGCGATTGCTGCCAGGTG | + |
Preference number: 3 (lower is better) Translates to: SAPPLPGDSPVC*PVSLQGDCCQV Trigger: CACCTGGCAGCAATCGCCCTGCAGAGATACAGGCCAGCATACAGGTGAGTCCCCTGGAAGAGGAGGAGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR TCA 72 bp | GCAACCCAAGATGCAGTACCAGGACGCCTTAACCTCTaGGATGAACGGCGCGGGCTTCAGGGTCACAGAGCA | + |
Preference number: 3 (lower is better) Translates to: ATQDAVPGRLNL*DERRGLQGHRA Trigger: TGCTCTGTGACCCTGAAGCCCGCGCCGTTCATCTCAGAGGTTAAGGCGTCCTGGTACTGCATCTTGGGTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR GCA 72 bp | GAGCCACTTTCCCCACACGGCTGTCTTCAGTGCAGATaGTGGTACCTCTGGACATCTGGCCCCAGATTCTGC | + |
Preference number: 3 (lower is better) Translates to: EPLSPHGCLQCR*WYLWTSGPRFC Trigger: GCAGAATCTGGGGCCAGATGTCCAGAGGTACCAGCATCTGCACTGAAGACAGCCGTGTGGGGAAAGTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR CCA 72 bp | CCACTTTCCCCACACGGCTGTCTTCAGTGCAGATGCTaGTACCTCTGGACATCTGGCCCCAGATTCTGCAGC | + |
Preference number: 3 (lower is better) Translates to: PLSPHGCLQCRC*YLWTSGPRFCS Trigger: GCTGCAGAATCTGGGGCCAGATGTCCAGAGGTACCAGCATCTGCACTGAAGACAGCCGTGTGGGGAAAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
||
3UTR CCA 72 bp | TTCAGGCATCTTCATCTGAGAAGCTGTTGGGGTGTCTaGCTCTCCAGCATACAGCCAGCCACTGTGGGACCA | + |
Preference number: 3 (lower is better) Translates to: FRHLHLRSCWGV*LSSIQPATVGP Trigger: TGGTCCCACAGTGGCTGGCTGTATGCTGGAGAGCCAGACACCCCAACAGCTTCTCAGATGAAGATGCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR TCA 72 bp | ACAAATGAGAATGAGTGCCTTCCCACCACTCACAAATaGCAGAGCATTGGGGCTCTCAGAGTAGGGGGCCAG | + |
Preference number: 3 (lower is better) Translates to: TNENECLPTTHK*QSIGALRVGGQ Trigger: CTGGCCCCCTACTCTGAGAGCCCCAATGCTCTGTCATTTGTGAGTGGTGGGAAGGCACTCATTCTCATTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR TCA 72 bp | ACCTCCGGCTGGGCTGTGTCATTAGTTACCTTGTTCTaGGGCTTCAGGCATCTTCATCTGAGAAGCTGTTGG | + |
Preference number: 3 (lower is better) Translates to: TSGWAVSLVTLF*GFRHLHLRSCW Trigger: CCAACAGCTTCTCAGATGAAGATGCCTGAAGCCTCAGAACAAGGTAACTAATGACACAGCCCAGCCGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR CCA 72 bp | GTTACTTCTCATCATCAGCTTCATTCGGCCGCGAGATaGCGAGGAGCTAAGTCAAGCACACTTCTGAGTGAC | + |
Preference number: 3 (lower is better) Translates to: VTSHHQLHSAAR*RGAKSSTLLSD Trigger: GTCACTCAGAAGTGTGCTTGACTTAGCTCCTCGCCATCTCGCGGCCGAATGAAGCTGATGATGAGAAGTAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR CCA 72 bp | AGCGGTGACAGCAGAGAGAGGCGGGTAAATGAGAATTaGTTTCGTTGTCTCCCCAATAGCATCACCAATGAG | + |
Preference number: 3 (lower is better) Translates to: SGDSRERRVNEN*FRCLPNSITNE Trigger: CTCATTGGTGATGCTATTGGGGAGACAACGAAACCAATTCTCATTTACCCGCCTCTCTCTGCTGTCACCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR CCA 72 bp | GGTAGATCTTATGCCTCCTATACCACTATGATCCCATaGTCCCATCCTGCACACTGGCCTAATTGCTACAGG | + |
Preference number: 3 (lower is better) Translates to: GRSYASYTTMIP*SHPAHWPNCYR Trigger: CCTGTAGCAATTAGGCCAGTGTGCAGGATGGGACCATGGGATCATAGTGGTATAGGAGGCATAAGATCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
||
3UTR TCA 72 bp | AAAGAAGCTTCTGCCATCGGCTGGTATCGCTTCTCCTaGGTTTGGGAGGTGGTTGTTGTTCAGCCTTACTTT | + |
Preference number: 3 (lower is better) Translates to: KEASAIGWYRFS*VWEVVVVQPYF Trigger: AAAGTAAGGCTGAACAACAACCACCTCCCAAACTCAGGAGAAGCGATACCAGCCGATGGCAGAAGCTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR GCA 72 bp | TGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATaGTCTCTTACTTCATCAGGCCTGAGATGCACACCT | + |
Preference number: 3 (lower is better) Translates to: CSLSSYQSNVTP*SLTSSGLRCTP Trigger: AGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
||
3UTR-3UTR CAA 90 bp | TTGGTTCTTGAAGTTTTCTTAGAACAAACACCCTCCTCTGCAGTTTCCTCTTGCGCGAAGTTGGCGTCATaGAGGAAGTTGCTGAGCTCC | + |
Preference number: 3 (lower is better) Translates to: LVLEVFLEQTPSSAVSSCAKLAS*RKLLSS Trigger: GGAGCTCAGCAACTTCCTCAATGACGCCAACTTCGC...GCAAGAGGAAACTGCAGAGGAGGGTGTTTGTTCTAAGAAAACTTCAAGAACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR CAA 90 bp | GTCATAAACAGGGGCAGATATCTCCACCATGAGATGAAACTTCTCATCGTTCATGCGTCATTGAGGAAGTaGCTGAGCTCCAGAGCTACT | + |
Preference number: 3 (lower is better) Translates to: VINRGRYLHHEMKLLIVHASLRK*LSSRAT Trigger: AGTAGCTCTGGAGCTCAGCAACTTCCTCAATGACGC...ATGAACGATGAGAAGTTTCATCTCATGGTGGAGATATCTGCCCCTGTTTATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR CAA 90 bp | GCCCTTCACCGTCCAGTTCAAAACTATAGGGTAAAGGAAGATAGGGTCCTCCGAGATAGTTCAGCTGAGTaGATTTGCTTTGTCGTCTTG | + |
Preference number: 3 (lower is better) Translates to: ALHRPVQNYRVKEDRVLRDSSAE*ICFVVL Trigger: CAAGACGACAAAGCAAATCAACTCAGCTGAACTATC...TCGGAGGACCCTATCTTCCTTTACCCTATAGTTTTGAACTGGACGGTGAAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR GCA 72 bp | ACTAGCACATTCTCACACTCCACCAGTCTAGCGACTTaGTGGGCGGGGAAAATCTCGTTGCCTTTAATATTA | + |
Preference number: 3 (lower is better) Translates to: TSTFSHSTSLAT*WAGKISLPLIL Trigger: TAATATTAAAGGCAACGAGATTTTCCCCGCCCAGCAAGTCGCTAGACTGGTGGAGTGTGAGAATGTGCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR CCA 72 bp | AGCACATTCTCACACTCCACCAGTCTAGCGACTTGCTaGGCGGGGAAAATCTCGTTGCCTTTAATATTATCA | + |
Preference number: 3 (lower is better) Translates to: STFSHSTSLATC*AGKISLPLILS Trigger: TGATAATATTAAAGGCAACGAGATTTTCCCCGCCCAGCAAGTCGCTAGACTGGTGGAGTGTGAGAATGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR GCA 72 bp | TGGGGCAAGCCTCTGTTTATTAGCTCTTCAAGTGCCTaGATGTTGTCTTTATGGGTGAGAGGTTTTCCAGAA | + |
Preference number: 3 (lower is better) Translates to: WGKPLFISSSSA*MLSLWVRGFPE Trigger: TTCTGGAAAACCTCTCACCCATAAAGACAACATGCAGGCACTTGAAGAGCTAATAAACAGAGGCTTGCCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
3UTR GCA 72 bp | TTCTTAGAACAAACACCCTCCTCTGCAGTTTCCTCTTaGTCAATACCAAAAAGAGACCTGCACCCTGATGTG | + |
Preference number: 3 (lower is better) Translates to: FLEQTPSSAVSS*SIPKRDLHPDV Trigger: CACATCAGGGTGCAGGTCTCTTTTTGGTATTGAGCAAGAGGAAACTGCAGAGGAGGGTGTTTGTTCTAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR CCA 72 bp | GTCATTAACCAAACCACTATGTGTCTGAGGACTTCGTaGTTCTGCTGTGTTCATCATCAGTTGCGTGATGCT | + |
Preference number: 3 (lower is better) Translates to: VINQTTMCLRTS*FCCVHHQLRDA Trigger: AGCATCACGCAACTGATGATGAACACAGCAGAACCACGAAGTCCTCAGACACATAGTGGTTTGGTTAATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
3UTR-3UTR CAA 90 bp | TGTGCATTCGTTTCCAAACCTTTAATTTCAAAGAAGCTTCTGCCATCGGCTGGTTTTGGGAGGTGGTTGTaGTTCAGCCTTACTTTCCCA | + |
Preference number: 3 (lower is better) Translates to: CAFVSKPLISKKLLPSAGFGRWL*FSLTFP Trigger: TGGGAAAGTAAGGCTGAACAACAACCACCTCCCAAA...ACCAGCCGATGGCAGAAGCTTCTTTGAAATTAAAGGTTTGGAAACGAATGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR CAA 90 bp | AACAGGGGCAGATATCTCCACCATGAGATGAAACTTCTCATCGTTCATGCATTTGAGTTTGGGAGGTGGTaGTTGTTCAGCCTTACTTTC | + |
Preference number: 3 (lower is better) Translates to: NRGRYLHHEMKLLIVHAFEFGRW*LFSLTF Trigger: GAAAGTAAGGCTGAACAACAACCACCTCCCAAACTC...AAATGCATGAACGATGAGAAGTTTCATCTCATGGTGGAGATATCTGCCCCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR TCA 72 bp | TTAGACGGTCAGTCCAGCCCTCAACACTGTCTCAGATaGTGCTACTTTCAAAGAAGTAAACCTCCTTTGTCT | + |
Preference number: 3 (lower is better) Translates to: LDGQSSPQHCLR*CYFQRSKPPLS Trigger: AGACAAAGGAGGTTTACTTCTTTGAAAGTAGCATCATCTGAGACAGTGTTGAGGGCTGGACTGACCGTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
3UTR GCA 72 bp | GCCAGCTGTTCATTTATCTTTTCAGGCAGCAGCACCTaGTGTGGCTTCTTGGTTCTTGAAGTTTTCTTAGAA | + |
Preference number: 3 (lower is better) Translates to: ASCSFIFSGSST*CGFLVLEVFLE Trigger: TTCTAAGAAAACTTCAAGAACCAAGAAGCCACAGCAGGTGCTGCTGCCTGAAAAGATAAATGAACAGCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR CAA 90 bp | GACTTGAGTGCCCTCCTAGAAATGACAGTCTCCTTATATTTTATCCTTTTCACTTCGCTTCTCCTGAGTTaGGGAGGTGGTTGTTGTTCA | + |
Preference number: 3 (lower is better) Translates to: DLSALLEMTVSLYFILFTSLLLS*GGGCCS Trigger: TGAACAACAACCACCTCCCAAACTCAGGAGAAGCGA...AGTGAAAAGGATAAAATATAAGGAGACTGTCATTTCTAGGAGGGCACTCAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR TCA 72 bp | CAGTTGCGTGATGCTGACAGAGTATTTCTGCAATTATaGAGAGTTGCTGTGCTAGTGCTGTTTTATACGTGG | + |
Preference number: 3 (lower is better) Translates to: QLRDADRVFLQL*RVAVLVLFYTW Trigger: CCACGTATAAAACAGCACTAGCACAGCAACTCTTCATAATTGCAGAAATACTCTGTCAGCATCACGCAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
3UTR TCA 72 bp | CAAATGTCACTCCATGCTCTCTTACTTCATCAGGCCTaGGATGCACACCTCATTTTTCTACTTCACTCACTT | + |
Preference number: 3 (lower is better) Translates to: QMSLHALLLHQA*DAHLIFLLHSL Trigger: AAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGTGACATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
||
3UTR GCA 72 bp | GTCACTCCATGCTCTCTTACTTCATCAGGCCTGAGATaGACACCTCATTTTTCTACTTCACTCACTTTAGTA | + |
Preference number: 3 (lower is better) Translates to: VTPCSLTSSGLR*TPHFSTSLTLV Trigger: TACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
||
3UTR TCA 72 bp | GACACGAAATCAAACCTAGTTGTCACTGATATTCTATaGTTGTCACCAAGAAGGTCTGCATGGTCTTTGTCC | + |
Preference number: 3 (lower is better) Translates to: DTKSNLVVTDIL*LSPRRSAWSLS Trigger: GGACAAAGACCATGCAGACCTTCTTGGTGACAATCATAGAATATCAGTGACAACTAGGTTTGATTTCGTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
||
3UTR CCA 72 bp | ACACCACTATTAACACGTGACACTAGGATTTCAACTTaGGTCCACCAGAAAACAGAACTCATAGACACTGTT | + |
Preference number: 3 (lower is better) Translates to: TPLLTRDTRIST*VHQKTELIDTV Trigger: AACAGTGTCTATGAGTTCTGTTTTCTGGTGGACCCAAGTTGAAATCCTAGTGTCACGTGTTAATAGTGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
||
3UTR-3UTR CAA 90 bp | GTCATAAACAGGGGCAGATATCTCCACCATGAGATGAAACTTCTCATCGTTCATTGCTCTTCTTTATTTTaGAGCTCCCCAAGAACTTCT | + |
Preference number: 3 (lower is better) Translates to: VINRGRYLHHEMKLLIVHCSSLF*SSPRTS Trigger: AGAAGTTCTTGGGGAGCTCAAAAATAAAGAAGAGCA...ATGAACGATGAGAAGTTTCATCTCATGGTGGAGATATCTGCCCCTGTTTATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR CAA 90 bp | GTCTCAGATGATGCTACTTTCAAAGAAGTAAACCTCCTTTGTCTTGCTTTTATTTCAAGTGCCTGCATGTaGTCTTTATGGGTGAGAGGT | + |
Preference number: 3 (lower is better) Translates to: VSDDATFKEVNLLCLAFISSACM*SLWVRG Trigger: ACCTCTCACCCATAAAGACAACATGCAGGCACTTGA...AATAAAAGCAAGACAAAGGAGGTTTACTTCTTTGAAAGTAGCATCATCTGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
3UTR-3UTR CAA 90 bp | GACTTGAGTGCCCTCCTAGAAATGACAGTCTCCTTATATTTTATCCTTTTCACTACCTGCTGTGGCTTCTaGGTTCTTGAAGTTTTCTTA | + |
Preference number: 3 (lower is better) Translates to: DLSALLEMTVSLYFILFTTCCGF*VLEVFL Trigger: TAAGAAAACTTCAAGAACCAAGAAGCCACAGCAGGT...AGTGAAAAGGATAAAATATAAGGAGACTGTCATTTCTAGGAGGGCACTCAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR-3UTR CAA 90 bp | TTGTCCCCTTGCTCTTCTAAGTTTATTTGTGACAGCCTTTGCACAGCAGTATTTCCTCTTCTTCTAGCTTaGAGACCAAAAGACCAAATT | + |
Preference number: 3 (lower is better) Translates to: LSPCSSKFICDSLCTAVFPLLLA*RPKDQI Trigger: AATTTGGTCTTTTGGTCTCAAAGCTAGAAGAAGAGG...AAATACTGCTGTGCAAAGGCTGTCACAAATAAACTTAGAAGAGCAAGGGGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
||
3UTR GCA 72 bp | GCTTCAGGCTTGATACACAGCAGTCTACCACTCAACTaGATTAAACCAGAAGTACACAATCTTTACATATAC | + |
Preference number: 3 (lower is better) Translates to: ASGLIHSSLPLN*IKPEVHNLYIY Trigger: GTATATGTAAAGATTGTGTACTTCTGGTTTAATGCAGTTGAGTGGTAGACTGCTGTGTATCAAGCCTGAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
3UTR TCA 72 bp | CCTCTCAGTAATAAATTGGTAGTACATTATTTTTGGTaGAGGATCGGGAATACAGTTGATTGTCGCAGCCAA | + |
Preference number: 3 (lower is better) Translates to: PLSNKLVVHYFW*RIGNTVDCRSQ Trigger: TTGGCTGCGACAATCAACTGTATTCCCGATCCTTCACCAAAAATAATGTACTACCAATTTATTACTGAGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
3UTR GCA 72 bp | GATCACTATGGCTTTAAACTTACTGGGAGACTTGAGTaGCCTCCTAGAAATGACAGTCTCCTTATATTTTAT | + |
Preference number: 3 (lower is better) Translates to: DHYGFKLTGRLE*PPRNDSLLIFY Trigger: ATAAAATATAAGGAGACTGTCATTTCTAGGAGGGCACTCAAGTCTCCCAGTAAGTTTAAAGCCATAGTGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR-3UTR CAA 90 bp | GACTTGAGTGCCCTCCTAGAAATGACAGTCTCCTTATATTTTATCCTTTTCACTCAGGAATCTTGGTCTTaGCTTAAATTTCATGACTTC | + |
Preference number: 3 (lower is better) Translates to: DLSALLEMTVSLYFILFTQESWS*LKFHDF Trigger: GAAGTCATGAAATTTAAGCAAAGACCAAGATTCCTG...AGTGAAAAGGATAAAATATAAGGAGACTGTCATTTCTAGGAGGGCACTCAAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
||
3UTR TCA 72 bp | AGACTAAAATTCTTGCATAACAAGATCTCATATCAGTaGCAAAAATGTCTCAAAGAGCCAGGCATAGTGGTC | + |
Preference number: 3 (lower is better) Translates to: RLKFLHNKISYQ*QKCLKEPGIVV Trigger: GACCACTATGCCTGGCTCTTTGAGACATTTTTGTCACTGATATGAGATCTTGTTATGCAAGAATTTTAGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR-3UTR CAA 90 bp | GTCTCAGATGATGCTACTTTCAAAGAAGTAAACCTCCTTTGTCTTGCTTTTATTGGTAGTACATTATTTTaGGTGAAGGATCGGGAATAC | + |
Preference number: 3 (lower is better) Translates to: VSDDATFKEVNLLCLAFIGSTLF*VKDREY Trigger: GTATTCCCGATCCTTCACCAAAAATAATGTACTACC...AATAAAAGCAAGACAAAGGAGGTTTACTTCTTTGAAAGTAGCATCATCTGAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
3UTR TCA 72 bp | GTTGTCTTTATGGGTGAGAGGTTTTCCAGAATCGAATaGTTGAGTTATCATTCCATATCAGTATTCATCATC | + |
Preference number: 3 (lower is better) Translates to: VVFMGERFSRIE*LSYHSISVFII Trigger: GATGATGAATACTGATATGGAATGATAACTCAATCATTCGATTCTGGAAAACCTCTCACCCATAAAGACAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR CCA 72 bp | AGTTGGCATCATTACTTCATTTTATATATGTATCACTaGATCACACCACTATTAACACGTGACACTAGGATT | + |
Preference number: 3 (lower is better) Translates to: SWHHYFILYMYH*ITPLLTRDTRI Trigger: AATCCTAGTGTCACGTGTTAATAGTGGTGTGATCCAGTGATACATATATAAAATGAAGTAATGATGCCAACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS-3UTR TCA 90 bp | GCACCTGGGACAGCAAGCTACGGAGAAAGACCGGGTCTCACTGCAGGTCGCACCAAGATGGGCAGACGGTaGGCTTGCCAGATAAGTCAG | + |
Preference number: 4 (lower is better) Translates to: APGTASYGERPGLTAGRTKMGRR*ACQISQ Trigger: CTGACTTATCTGGCAAGCTCACCGTCTGCCCATCTT...GGTGCGACCTGCAGTGAGACCCGGTCTTTCTCCGTAGCTTGCTGTCCCAGGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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3UTR CAA 72 bp | AATGGGTGCGAGGAGCCCGTAGCACTGGGTCACTGCTaGGAGGGCGAAGTTGGCGTCATTGAGGAAGTTGCT | + |
Preference number: 4 (lower is better) Translates to: NGCEEPVALGHC*EGEVGVIEEVA Trigger: AGCAACTTCCTCAATGACGCCAACTTCGCCCTCCAAGCAGTGACCCAGTGCTACGGGCTCCTCGCACCCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS-3UTR TCA 90 bp | GCTCCAAAACAGAGGACAGATAGAGGGGCCTGTGGCACTGGTGCTCTGTCTCCGCTTCACTGTAGTCTTTaGAACCAGGAGGTGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: APKQRTDRGACGTGALSPLHCSL*NQEVRS Trigger: GCTCCTCACCTCCTGGTTTCAAAGACTACAGTGAAG...CGGAGACAGAGCACCAGTGCCACAGGCCCCTCTATCTGTCCTCTGTTTTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR CAA 72 bp | CTGTGGCACTGGTGCTCTGTCTCCGACAGCAGGGAGTaGACCTTCTCCTCTGCCTCCATCAGTAAAATGGAC | + |
Preference number: 4 (lower is better) Translates to: LWHWCSVSDSRE*TFSSASISKMD Trigger: GTCCATTTTACTGATGGAGGCAGAGGAGAAGGTCAACTCCCTGCTGTCGGAGACAGAGCACCAGTGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR CAA 72 bp | GTTCTGAGGCTTCAGGCATCTTCATCTGAGAAGCTGTaGGGGTGTCTGGCTCTCCAGCATACAGCCAGCCAC | + |
Preference number: 4 (lower is better) Translates to: VLRLQASSSEKL*GCLALQHTASH Trigger: GTGGCTGGCTGTATGCTGGAGAGCCAGACACCCCAACAGCTTCTCAGATGAAGATGCCTGAAGCCTCAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS-3UTR TCA 90 bp | GTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCCAGCAGAGGTGCTCCTaGGGGAGAGCCACCTGCATG | + |
Preference number: 4 (lower is better) Translates to: VKKPAPSPVTNQMSLHALQQRCS*GRATCM Trigger: CATGCAGGTGGCTCTCCCTCAGGAGCACCTCTGCTG...GAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | GTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCCGCACGCCGAGCAAATaGCTCCCCGTGGATGCCATC | + |
Preference number: 4 (lower is better) Translates to: VKKPAPSPVTNQMSLHALRTPSK*LPVDAI Trigger: GATGGCATCCACGGGGAGGCATTTGCTCGGCGTGCG...GAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | TTTACACCATCAGTCTCTAGAGCAGAGTGTCACAGTGAGCTAGCTAAGGAAAGACAGGAGGTGAGGAGCTaGTGGGGGCACCAGGGAGGG | + |
Preference number: 4 (lower is better) Translates to: FTPSVSRAECHSELAKERQEVRS*WGHQGG Trigger: CCCTCCCTGGTGCCCCCAGCAGCTCCTCACCTCCTG...TCTTTCCTTAGCTAGCTCACTGTGACACTCTGCTCTAGAGACTGATGGTGTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR GCA 90 bp | ATGCTAGGTGAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCAGGAGGTGAGGAGCTaGTGGGGGCACCAGGGAGGG | + |
Preference number: 4 (lower is better) Translates to: MLGEQSKSLLPLQLPIKCQEVRS*WGHQGG Trigger: CCCTCCCTGGTGCCCCCAGCAGCTCCTCACCTCCTG...ACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTCACCTAGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | GAGCCCGTAGCACTGGGTCACTGCTTGGAGGGCGAAGTTGGCGTCATTGAGGAACGTCTTGAGAGTCCTTaGCATAGCAATGGTCAATCA | + |
Preference number: 4 (lower is better) Translates to: EPVALGHCLEGEVGVIEERLESP*HSNGQS Trigger: TGATTGACCATTGCTATGTCAAGGACTCTCAAGACG...TTCCTCAATGACGCCAACTTCGCCCTCCAAGCAGTGACCCAGTGCTACGGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS-3UTR TCA 90 bp | TCCAGGGGACTCACCTGTATGCTGGCCTGTATCTCTGCAGGGCGATTGCTGCCAGTACGGAGCAGACTCTaGAAAAGCAATGCAGACAAT | + |
Preference number: 4 (lower is better) Translates to: SRGLTCMLACISAGRLLPVRSRL*KSNADN Trigger: ATTGTCTGCATTGCTTTTTCAGAGTCTGCTCCGTAC...TGGCAGCAATCGCCCTGCAGAGATACAGGCCAGCATACAGGTGAGTCCCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR TCA 90 bp | GCTCCAAAACAGAGGACAGATAGAGGGGCCTGTGGCACTGGTGCTCTGTCTCCGACTTTAAGGCTCCTTTaGTTGCTGGTTTGGAGAACA | + |
Preference number: 4 (lower is better) Translates to: APKQRTDRGACGTGALSPTLRLL*LLVWRT Trigger: TGTTCTCCAAACCAGCAATCAAAGGAGCCTTAAAGT...CGGAGACAGAGCACCAGTGCCACAGGCCCCTCTATCTGTCCTCTGTTTTGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR CCA 90 bp | GTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCGGCCAGCAGGATGGGTaGGGGAGGAATTCTGCTCTT | + |
Preference number: 4 (lower is better) Translates to: VKKPAPSPVTNQMSLHALGQQDG*GRNSAL Trigger: AAGAGCAGAATTCCTCCCCCACCCATCCTGCTGGCC...GAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | ATGCTAGGTGAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTTCCGGGCCAGCAGGATaGGTGGGGGAGGAATTCTGC | + |
Preference number: 4 (lower is better) Translates to: MLGEQSKSLLPLQLPIKCSGPAG*VGEEFC Trigger: GCAGAATTCCTCCCCCACCCATCCTGCTGGCCCGGA...ACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTCACCTAGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCGCGCTATCTTCGCTGTaGTCATCGCCGCTTGCAAAC | + |
Preference number: 4 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFALSSL*SSPLAN Trigger: GTTTGCAAGCGGCGATGATCACAGCGAAGATAGCGC...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCCCGACAGCAGGGAGTTaGCCTTCTCCTCTGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLPTAGS*PSPLPP Trigger: TGGAGGCAGAGGAGAAGGTCAACTCCCTGCTGTCGG...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | GCTCCAAAACAGAGGACAGATAGAGGGGCCTGTGGCACTGGTGCTCTGTCTCCGGCAAACACCCCCAGATaGCAAATTTCGATAGAAATT | + |
Preference number: 4 (lower is better) Translates to: APKQRTDRGACGTGALSPANTPR*QISIEI Trigger: AATTTCTATCGAAATTTGGCATCTGGGGGTGTTTGC...CGGAGACAGAGCACCAGTGCCACAGGCCCCTCTATCTGTCCTCTGTTTTGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR CCA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCGCAAGAGGCCAGGAGTaGGTTTTTACTGTCCAGGGG | + |
Preference number: 4 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFARGQE*VFTVQG Trigger: CCCCTGGACAGTAAAAACCCACTCCTGGCCTCTTGC...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TCCAACATAGACCCAGATCTACAAGATTCCAAAGCTAGTACAATAATTCTCTGCGAGGTGAGGAGCTGCTaGGGGCACCAGGGAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: SNIDPDLQDSKASTIILCEVRSC*GHQGGR Trigger: CCTCCCTCCCTGGTGCCCCCAGCAGCTCCTCACCTC...GCAGAGAATTATTGTACTAGCTTTGGAATCTTGTAGATCTGGGTCTATGTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGGGCAGTGCTGTATGCTaGCCTGTATCTCTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMGSAVC*PVSLQG Trigger: GCCCTGCAGAGATACAGGCCAGCATACAGCACTGCC...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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3UTR CAA 72 bp | AGCTTCTGCCATCGGCTGGTATCGCTTCTCCTGAGTTaGGGAGGTGGTTGTTGTTCAGCCTTACTTTCCCAT | + |
Preference number: 4 (lower is better) Translates to: SFCHRLVSLLLS*GGGCCSALLSH Trigger: ATGGGAAAGTAAGGCTGAACAACAACCACCTCCCAAACTCAGGAGAAGCGATACCAGCCGATGGCAGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS-3UTR TCA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCCATGTCAGGTACCTaGTGGACAGGAGCGGGACAG | + |
Preference number: 4 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTSMSGT*WTGAGQ Trigger: CTGTCCCGCTCCTGTCCATCAGGTACCTGACATGGA...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | GCTGCCAGGTGTAGCCTAGCCTCCACCATGATCTCCAGCTCCAAAACAGAGGACGCACATCTGGTTTTCTaGAGATATCATCAAGAGCTT | + |
Preference number: 4 (lower is better) Translates to: AARCSLASTMISSSKTEDAHLVF*RYHQEL Trigger: AAGCTCTTGATGATATCTTCAGAAAACCAGATGTGC...GTCCTCTGTTTTGGAGCTGGAGATCATGGTGGAGGCTAGGCTACACCTGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR GCA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTGGACAGAGGACTCCATaGACATGCTGGCCCACAGCA | + |
Preference number: 4 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTGQRTP*TCWPTA Trigger: TGCTGTGGGCCAGCATGTGCATGGAGTCCTCTGTCC...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCGATGGCAGTGCTGTATaGTGGCCTGTATCTCTGCAG | + |
Preference number: 4 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFDGSAV*WPVSLQ Trigger: CTGCAGAGATACAGGCCAGCATACAGCACTGCCATC...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | GCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATCAGTCCGGAAGAACACCCTaGGTAGGGACACAGACACAG | + |
Preference number: 4 (lower is better) Translates to: APSPVTNQMSLHALLLHQSGRTP*VGTQTQ Trigger: CTGTGTCTGTGTCCCTACCCAGGGTGTTCTTCCGGA...CTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGAAGATGGGCAGACGGTaGGCTTGCCAGATAAGTCAG | + |
Preference number: 4 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMKMGRR*ACQISQ Trigger: CTGACTTATCTGGCAAGCTCACCGTCTGCCCATCTT...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | TCCAACATAGACCCAGATCTACAAGATTCCAAAGCTAGTACAATAATTCTCTGCTATCTGGCGCAAGCCTaGCGGGAGAGCTCAGGGCCA | + |
Preference number: 4 (lower is better) Translates to: SNIDPDLQDSKASTIILCYLAQA*RESSGP Trigger: TGGCCCTGAGCTCTCCCGTCAGGCTTGCGCCAGATA...GCAGAGAATTATTGTACTAGCTTTGGAATCTTGTAGATCTGGGTCTATGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | GCTCCAAAACAGAGGACAGATAGAGGGGCCTGTGGCACTGGTGCTCTGTCTCCGAAAATATTGGTACAGTaGAAGAAGAGGCAGAACTAT | + |
Preference number: 4 (lower is better) Translates to: APKQRTDRGACGTGALSPKILVQ*KKRQNY Trigger: ATAGTTCTGCCTCTTCTTGCACTGTACCAATATTTT...CGGAGACAGAGCACCAGTGCCACAGGCCCCTCTATCTGTCCTCTGTTTTGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR GCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGGGCCTGTGGCACTGGTaGTCTGTCTCCGACAGCAGG | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMGLWHW*SVSDSR Trigger: CCTGCTGTCGGAGACAGAGCACCAGTGCCACAGGCC...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTACTCCATGCACATGCTaGCCCACAGCAGGAACTCCA | + |
Preference number: 4 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTTPCTC*PTAGTP Trigger: TGGAGTTCCTGCTGTGGGCCAGCATGTGCATGGAGT...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | GCTGCCAGGTGTAGCCTAGCCTCCACCATGATCTCCAGCTCCAAAACAGAGGACATATCATCAAGAGCTTaGCTCCAGCATTTAAAAGCA | + |
Preference number: 4 (lower is better) Translates to: AARCSLASTMISSSKTEDISSRA*LQHLKA Trigger: TGCTTTTAAATGCTGGAGCCAAGCTCTTGATGATAT...GTCCTCTGTTTTGGAGCTGGAGATCATGGTGGAGGCTAGGCTACACCTGGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR CCA 90 bp | GTCTCAGATGATGCTACTTTCAAAGAAGTAAACCTCCTTTGTCTTGCTTTTATTGAGGTGAGGAGCTGCTaGGGGCACCAGGGAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: VSDDATFKEVNLLCLAFIEVRSC*GHQGGR Trigger: CCTCCCTCCCTGGTGCCCCCAGCAGCTCCTCACCTC...AATAAAAGCAAGACAAAGGAGGTTTACTTCTTTGAAAGTAGCATCATCTGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR TCA 90 bp | GCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATCAGTGGAAGACTGTCCTATaGCCATCAGCTTCCGGCAAA | + |
Preference number: 4 (lower is better) Translates to: APSPVTNQMSLHALLLHQWKTVL*PSASGK Trigger: TTTGCCGGAAGCTGATGGTCATAGGACAGTCTTCCA...CTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | ATGATGGAAATTAAGTTCAGAGCTTCAGGCTTGATACACAGCAGTCTACCACTCGACCAGCCCCAGCTGTaGGGAGGGAAGTTTGCTTTT | + |
Preference number: 4 (lower is better) Translates to: MMEIKFRASGLIHSSLPLDQPQL*GGKFAF Trigger: AAAAGCAAACTTCCCTCCTCACAGCTGGGGCTGGTC...GAGTGGTAGACTGCTGTGTATCAAGCCTGAAGCTCTGAACTTAATTTCCATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR TCA 90 bp | ATGATGGAAATTAAGTTCAGAGCTTCAGGCTTGATACACAGCAGTCTACCACTCGCGCTATCTTCGCTGTaGTCATCGCCGCTTGCAAAC | + |
Preference number: 4 (lower is better) Translates to: MMEIKFRASGLIHSSLPLALSSL*SSPLAN Trigger: GTTTGCAAGCGGCGATGATCACAGCGAAGATAGCGC...GAGTGGTAGACTGCTGTGTATCAAGCCTGAAGCTCTGAACTTAATTTCCATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR TCA 90 bp | AAGTATCCACACACAGTGAGGACAAGGATAACATCAGTTACACTTAGATACCCCAGGGAGCTGTCCCGATaGACCTTGCCTGATGATTCG | + |
Preference number: 4 (lower is better) Translates to: KYPHTVRTRITSVTLRYPRELSR*TLPDDS Trigger: CGAATCATCAGGCAAGGTTCATCGGGACAGCTCCCT...GGGGTATCTAAGTGTAACTGATGTTATCCTTGTCCTCACTGTGTGTGGATACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS-3UTR GCA 90 bp | GTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCAGCTTCCATCTGCTTTaGAACCCAAGATGCAGTACC | + |
Preference number: 4 (lower is better) Translates to: VKKPAPSPVTNQMSLHALSFHLL*NPRCST Trigger: GGTACTGCATCTTGGGTTGCAAAGCAGATGGAAGCT...GAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | GTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCCCCATAGCTTCCATCTaGTTTGCAACCCAAGATGCA | + |
Preference number: 4 (lower is better) Translates to: VKKPAPSPVTNQMSLHALPIASI*FATQDA Trigger: TGCATCTTGGGTTGCAAAGCAGATGGAAGCTATGGG...GAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CTGAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTCAGGATCCGCCTGTTTaGGTCAGAGAGGGCTTCCAA | + |
Preference number: 4 (lower is better) Translates to: LRCTPHFSTSLTLVHTSSQDPPV*VREGFQ Trigger: TTGGAAGCCCTCTCTGACTCAAACAGGCGGATCCTG...ACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CTGAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTAACAGCTGGGAATGCTaGACTCGCCTCTCTCCTCGA | + |
Preference number: 4 (lower is better) Translates to: LRCTPHFSTSLTLVHTSSNSWEC*TRLSPR Trigger: TCGAGGAGAGAGGCGAGTTCAGCATTCCCAGCTGTT...ACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | ATTATTTTTGGTGAAGGATCGGGAATACAGTTGATTGTCGCAGCCAAACTTATGGGGGGTGTTGGCATGTaGATCTCTTCCGTTCCCAGG | + |
Preference number: 4 (lower is better) Translates to: IIFGEGSGIQLIVAAKLMGGVGM*ISSVPR Trigger: CCTGGGAACGGAAGAGATGCACATGCCAACACCCCC...CATAAGTTTGGCTGCGACAATCAACTGTATTCCCGATCCTTCACCAAAAATAAT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR GCA 90 bp | TTTACACCATCAGTCTCTAGAGCAGAGTGTCACAGTGAGCTAGCTAAGGAAAGACACCAGGGAGGGAGGTaGCAAATTCTTTCCAGTTGT | + |
Preference number: 4 (lower is better) Translates to: FTPSVSRAECHSELAKERHQGGR*QILSSC Trigger: ACAACTGGAAAGAATTTGGCACCTCCCTCCCTGGTG...TCTTTCCTTAGCTAGCTCACTGTGACACTCTGCTCTAGAGACTGATGGTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR GCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCCACCAGGGAGGGAGGTaGCAAATTCTTTCCAGTTGT | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLHQGGR*QILSSC Trigger: ACAACTGGAAAGAATTTGGCACCTCCCTCCCTGGTG...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | ATGCTAGGTGAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTAACAGCGGGGTCACTTaGTCTGTGTACCTCTCATGT | + |
Preference number: 4 (lower is better) Translates to: MLGEQSKSLLPLQLPIKCNSGVT*SVYLSC Trigger: ACATGAGAGGTACACAGAGCAAGTGACCCCGCTGTT...ACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTCACCTAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCGCCATGTCAAACATGTaGAGAACGGGCAGCCACTTA | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLAMSNM*RTGSHL Trigger: TAAGTGGCTGCCCGTTCTGCACATGTTTGACATGGC...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | GCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATCAGTCTTTAACAGAGCTGTaGCTTCTGGGAAGAGGCTTG | + |
Preference number: 4 (lower is better) Translates to: APSPVTNQMSLHALLLHQSLTEL*LLGRGL Trigger: CAAGCCTCTTCCCAGAAGGCACAGCTCTGTTAAAGA...CTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCTCGTTGTAATAGTTaGACGGCAGCCTGGGAGCAT | + |
Preference number: 4 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTSRCNS*TAAWEH Trigger: ATGCTCCCAGGCTGCCGTCCAACTATTACAACGAGA...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TTGGTTCTTGAAGTTTTCTTAGAACAAACACCCTCCTCTGCAGTTTCCTCTTGCTCGCTTCCTTCCAGTTaGTCAAGGAGCACAACGGCT | + |
Preference number: 4 (lower is better) Translates to: LVLEVFLEQTPSSAVSSCSLPSS*SRSTTA Trigger: AGCCGTTGTGCTCCTTGACCAACTGGAAGGAAGCGA...GCAAGAGGAAACTGCAGAGGAGGGTGTTTGTTCTAAGAAAACTTCAAGAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS-3UTR CCA 90 bp | GTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCAACACCTTCGAATCCTaGAGAAGCTTCAGTGTAGAG | + |
Preference number: 4 (lower is better) Translates to: VKKPAPSPVTNQMSLHALNTFES*RSFSVE Trigger: CTCTACACTGAAGCTTCTCCAGGATTCGAAGGTGTT...GAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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3UTR CAA 72 bp | CCGGATAGTTCAGCTGAGTTGATTTGCTTTGTCGTCTaGAGTAGATGTGTCTCCAACAAGGCCAGCTGTTCA | + |
Preference number: 4 (lower is better) Translates to: PDSSAELICFVV*SRCVSNKASCS Trigger: TGAACAGCTGGCCTTGTTGGAGACACATCTACTCAAGACGACAAAGCAAATCAACTCAGCTGAACTATCCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS-3UTR TCA 90 bp | GCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATCAGCGTCTTGAGAGTCCTTaGCATAGCAATGGTCAATCA | + |
Preference number: 4 (lower is better) Translates to: APSPVTNQMSLHALLLHQRLESP*HSNGQS Trigger: TGATTGACCATTGCTATGTCAAGGACTCTCAAGACG...CTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | TCCAACATAGACCCAGATCTACAAGATTCCAAAGCTAGTACAATAATTCTCTGCAGGGAGCTGTCCCGATaGACCTTGCCTGATGATTCG | + |
Preference number: 4 (lower is better) Translates to: SNIDPDLQDSKASTIILCRELSR*TLPDDS Trigger: CGAATCATCAGGCAAGGTTCATCGGGACAGCTCCCT...GCAGAGAATTATTGTACTAGCTTTGGAATCTTGTAGATCTGGGTCTATGTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | ATGCTAGGTGAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTTCCAGAGTGGAACAATaGGAAGAGGTTAGGGTCACA | + |
Preference number: 4 (lower is better) Translates to: MLGEQSKSLLPLQLPIKCSRVEQ*EEVRVT Trigger: TGTGACCCTAACCTCTTCTCATTGTTCCACTCTGGA...ACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTCACCTAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCTCAAATCTACCACGTTaGCGTCATCCAAAGGATGTT | + |
Preference number: 4 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFSNLPR*RHPKDV Trigger: AACATCCTTTGGATGACGTCAACGTGGTAGATTTGA...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCCGGGCACTTTCTTTTTaGACACCTTCGAATCCTGGA | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLRALSF*TPSNPG Trigger: TCCAGGATTCGAAGGTGTTCAAAAAGAAAGTGCCCG...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGTCCTCCATCAGCATTTaGCGCTCTATTCTTCCTTTC | + |
Preference number: 4 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMSSISI*RSILPF Trigger: GAAAGGAAGAATAGAGCGTCAAATGCTGATGGAGGA...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | GAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTCCAGTACAGATTCACTaGCCTGTGCAGCAGCTCGTA | + |
Preference number: 4 (lower is better) Translates to: EMHTSFFYFTHFSTYQQCPVQIH*PVQQLV Trigger: TACGAGCTGCTGCACAGGTCAGTGAATCTGTACTGG...ACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | TTTACACCATCAGTCTCTAGAGCAGAGTGTCACAGTGAGCTAGCTAAGGAAAGAAGCCCTTTTCTTATCTaGAAAGAGGAGGAGGCTTCC | + |
Preference number: 4 (lower is better) Translates to: FTPSVSRAECHSELAKERSPFLI*KEEEAS Trigger: GGAAGCCTCCTCCTCTTTGCAGATAAGAAAAGGGCT...TCTTTCCTTAGCTAGCTCACTGTGACACTCTGCTCTAGAGACTGATGGTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR GCA 90 bp | GCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATCAGGACGTAATACAGGCTTaGGATAACACTGCAGATGTC | + |
Preference number: 4 (lower is better) Translates to: APSPVTNQMSLHALLLHQDVIQA*DNTADV Trigger: GACATCTGCAGTGTTATCGCAAGCCTGTATTACGTC...CTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTGCAAAACTTCCAGTTaGTCAAGGAGCACAACGGCT | + |
Preference number: 4 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTCKTSS*SRSTTA Trigger: AGCCGTTGTGCTCCTTGACCAACTGGAAGTTTTGCA...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | GCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATCAGGTTTGTGCTAACAGTTaGAGCCTGCAAAACTTCCAG | + |
Preference number: 4 (lower is better) Translates to: APSPVTNQMSLHALLLHQVCANS*SLQNFQ Trigger: CTGGAAGTTTTGCAGGCTCCAACTGTTAGCACAAAC...CTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCCAGAGACAAGCTGTTTaGCTAGTCTCTGCTCTGAAG | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLQRQAV*LVSALK Trigger: CTTCAGAGCAGAGACTAGCCAAACAGCTTGTCTCTG...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCTTATCTTTCAGGTTTTaGGGGGTGGGTTTGCTCCTC | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLLSFRF*GVGLLL Trigger: GAGGAGCAAACCCACCCCCCAAAACCTGAAAGATAA...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CTGAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTCGTCGAAATCAGCAATaGATTCCTGGAGATACCGCC | + |
Preference number: 4 (lower is better) Translates to: LRCTPHFSTSLTLVHTSSRRNQQ*IPGDTA Trigger: GGCGGTATCTCCAGGAATTCATTGCTGATTTCGACG...ACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCAAAGCATGAAATGTaGGTCTGGCCGTTTCATCTC | + |
Preference number: 4 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTSKHEM*VWPFHL Trigger: GAGATGAAACGGCCAGACTCACATTTCATGCTTTGA...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCGTACGGAGCAGACTCTaGAAAAGCAATGCAGACAAT | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLVRSRL*KSNADN Trigger: ATTGTCTGCATTGCTTTTTCAGAGTCTGCTCCGTAC...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGTTTGCTTTGTCGTCTTaGGTAGATGTGTCTCCAACA | + |
Preference number: 4 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMFALSS*VDVSPT Trigger: TGTTGGAGACACATCTACTCAAGACGACAAAGCAAA...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | ATGCTAGGTGAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTAGTCATCCATCAGAATaGGGCTTTTTGCCAGGGTTA | + |
Preference number: 4 (lower is better) Translates to: MLGEQSKSLLPLQLPIKCSHPSE*GFLPGL Trigger: TAACCCTGGCAAAAAGCCTCATTCTGATGGATGACT...ACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTCACCTAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CTGAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTAGTTGTACAGGGACGTaGGAAGTGTGTCATCAGGCA | + |
Preference number: 4 (lower is better) Translates to: LRCTPHFSTSLTLVHTSSSCTGT*EVCHQA Trigger: TGCCTGATGACACACTTCTCACGTCCCTGTACAACT...ACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAAGTGGTAGATAATGGGTaGGAGGAGCCCGTAGCACTG | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYEVVDNG*EEPVAL Trigger: CAGTGCTACGGGCTCCTCGCACCCATTATCTACCAC...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGGTTTCTGTCCAGCTCTaGCATATCAAAAATGGATGG | + |
Preference number: 4 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMVSVQL*HIKNGW Trigger: CCATCCATTTTTGATATGGCAGAGCTGGACAGAAAC...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | TCCAACATAGACCCAGATCTACAAGATTCCAAAGCTAGTACAATAATTCTCTGCGTAGCCACCACGGTATaGAAGAACCATCGCTCTCCT | + |
Preference number: 4 (lower is better) Translates to: SNIDPDLQDSKASTIILCVATTV*KNHRSP Trigger: AGGAGAGCGATGGTTCTTGCATACCGTGGTGGCTAC...GCAGAGAATTATTGTACTAGCTTTGGAATCTTGTAGATCTGGGTCTATGTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | ATGCTAGGTGAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTAGCTCTTCAAGTGCCTaGATGTTGTCTTTATGGGTG | + |
Preference number: 4 (lower is better) Translates to: MLGEQSKSLLPLQLPIKCSSSSA*MLSLWV Trigger: CACCCATAAAGACAACATGCAGGCACTTGAAGAGCT...ACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTCACCTAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCCTTTTGTATGATGTCTaGCTTAAAGTGCTTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFLLYDV*LKVLLL Trigger: CAGGAGAAGCACTTTAAGGCAGACATCATACAAAAG...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGTTCATATTCCTCTGCTaGGGTTGCTTTACAGACCTT | + |
Preference number: 4 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMFIFLC*GCFTDL Trigger: AAGGTCTGTAAAGCAACCGCAGCAGAGGAATATGAA...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGACTCCTCAGAAGAACTaGAGGAGCTTCTGGAGGACG | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMTPQKN*RSFWRT Trigger: CGTCCTCCAGAAGCTCCTCCAGTTCTTCTGAGGAGT...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | GTATTAGTCACTGTAGATATCCCAGTTCTAAGTATTTGCTTGTATCAGGCTCTTGTAGCGTTGTTGCCTTaGTCATTGGAGGAGGGGGCT | + |
Preference number: 4 (lower is better) Translates to: VLVTVDIPVLSICLYQALVALLP*SLEEGA Trigger: AGCCCCCTCCTCCAATGACCAAGGCAACAACGCTAC...AAGAGCCTGATACAAGCAAATACTTAGAACTGGGATATCTACAGTGACTAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS-3UTR CCA 90 bp | GCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATCAGCGGGTAAATGAGAATTaGTTTCGTTGTCTCCCCAAT | + |
Preference number: 4 (lower is better) Translates to: APSPVTNQMSLHALLLHQRVNEN*FRCLPN Trigger: ATTGGGGAGACAACGAAACCAATTCTCATTTACCCG...CTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | GTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCGTTCAAAGATCAGGCTaGAACCTCCATTATCAGATT | + |
Preference number: 4 (lower is better) Translates to: VKKPAPSPVTNQMSLHALVQRSG*NLHYQI Trigger: AATCTGATAATGGAGGTTCCAGCCTGATCTTTGAAC...GAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCGGGAGTTCAGGGAAATaGGGTCTAAAAACTCACTGT | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLGSSGK*GLKTHC Trigger: ACAGTGAGTTTTTAGACCCCATTTCCCTGAACTCCC...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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3UTR CAA 72 bp | ACCAGTCTAGCGACTTGCTGGGCGGGGAAAATCTCGTaGCCTTTAATATTATCACAGAAGAGATTCTCTTCT | + |
Preference number: 4 (lower is better) Translates to: TSLATCWAGKIS*PLILSQKRFSS Trigger: AGAAGAGAATCTCTTCTGTGATAATATTAAAGGCAACGAGATTTTCCCCGCCCAGCAAGTCGCTAGACTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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3UTR CAA 72 bp | TTTATCTTTTCAGGCAGCAGCACCTGCTGTGGCTTCTaGGTTCTTGAAGTTTTCTTAGAACAAACACCCTCC | + |
Preference number: 4 (lower is better) Translates to: FIFSGSSTCCGF*VLEVFLEQTPS Trigger: GGAGGGTGTTTGTTCTAAGAAAACTTCAAGAACCAAGAAGCCACAGCAGGTGCTGCTGCCTGAAAAGATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS-3UTR TCA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGTGTTTCTCTTCACATTaGTCAATGGTTCGACTGCAA | + |
Preference number: 4 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMCFSSH*SMVRLQ Trigger: TTGCAGTCGAACCATTGATCAATGTGAAGAGAAACA...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | ATGCTAGGTGAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTACTTTAAGGCTCCTTTaGTTGCTGGTTTGGAGAACA | + |
Preference number: 4 (lower is better) Translates to: MLGEQSKSLLPLQLPIKCTLRLL*LLVWRT Trigger: TGTTCTCCAAACCAGCAATCAAAGGAGCCTTAAAGT...ACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTCACCTAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | TCCAACATAGACCCAGATCTACAAGATTCCAAAGCTAGTACAATAATTCTCTGCACGGATTCCTCATTCTaGAGGTTGGCATCGCTTTCG | + |
Preference number: 4 (lower is better) Translates to: SNIDPDLQDSKASTIILCTDSSF*RLASLS Trigger: CGAAAGCGATGCCAACCTGCAGAATGAGGAATCCGT...GCAGAGAATTATTGTACTAGCTTTGGAATCTTGTAGATCTGGGTCTATGTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | ATGATGGAAATTAAGTTCAGAGCTTCAGGCTTGATACACAGCAGTCTACCACTCGACGTAATACAGGCTTaGGATAACACTGCAGATGTC | + |
Preference number: 4 (lower is better) Translates to: MMEIKFRASGLIHSSLPLDVIQA*DNTADV Trigger: GACATCTGCAGTGTTATCGCAAGCCTGTATTACGTC...GAGTGGTAGACTGCTGTGTATCAAGCCTGAAGCTCTGAACTTAATTTCCATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR GCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCGTGGGGGAGGAATTCTaGTCTTCTTTATTTTTGAGC | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLVGEEF*SSLFLS Trigger: GCTCAAAAATAAAGAAGAGCAGAATTCCTCCCCCAC...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCTCTGTGGTTTGGTTGTaGTTCTTTTTCTTAGAGACA | + |
Preference number: 4 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFSVVWL*FFFLET Trigger: TGTCTCTAAGAAAAAGAAGCACAACCAAACCACAGA...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGGAACCATCGCTCTCCTaGAACATAAGAAGATTTTCA | + |
Preference number: 4 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMEPSLS*NIRRFS Trigger: TGAAAATCTTCTTATGTTGCAGGAGAGCGATGGTTC...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | CTGAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTTTCCTCTGCTGCGGTTaGTTTACAGACCTTCAAAGC | + |
Preference number: 4 (lower is better) Translates to: LRCTPHFSTSLTLVHTSSFLCCG*FTDLQS Trigger: GCTTTGAAGGTCTGTAAAGCAACCGCAGCAGAGGAA...ACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCCGTTTCAGGAAAAGATaGATTTCTTTTTGGCGCAAA | + |
Preference number: 4 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFRFRKR*ISFWRK Trigger: TTTGCGCCAAAAAGAAATGCATCTTTTCCTGAAACG...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCCGGCAGTGTAGAGAGTaGCTCTCCATGTCAGGTACC | + |
Preference number: 4 (lower is better) Translates to: IRIEANSLKIWSKQVVKFRQCRE*LSMSGT Trigger: GGTACCTGACATGGAGAGCCACTCTCTACACTGCCG...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATATCATCAAGAGCTTaGCTCCAGCATTTAAAAGCA | + |
Preference number: 4 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFISSRA*LQHLKA Trigger: TGCTTTTAAATGCTGGAGCCAAGCTCTTGATGATAT...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCAACACTCAGTGCTTCTaGGCTTCTTTACTTTTTCCC | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLNTQCF*ASLLFP Trigger: GGGAAAAAGTAAAGAAGCCCAGAAGCACTGAGTGTT...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGTCAGGTAGATGGCTTTaGACAGCTTGTTCTTCTTTA | + |
Preference number: 4 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMSGRWL*TACSSL Trigger: TAAAGAAGAACAAGCTGTCCAAAGCCATCTACCTGA...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCAGAGAAAGTTATCCTaGCTAACAGGAAAGGTTTTG | + |
Preference number: 4 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMQRKLS*LTGKVL Trigger: CAAAACCTTTCCTGTTAGCCAGGATAACTTTCTCTG...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | ATGCTAGGTGAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTAGGTTAACCAGAATGTaGGGCAAGCCTCTGTTTATT | + |
Preference number: 4 (lower is better) Translates to: MLGEQSKSLLPLQLPIKCRLTRM*GKPLFI Trigger: AATAAACAGAGGCTTGCCCCACATTCTGGTTAACCT...ACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTCACCTAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGGGGTTAACCAGGATCTaGGAGAAAGGAATTCGCTCC | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMGLTRI*EKGIRS Trigger: GGAGCGAATTCCTTTCTCCCAGATCCTGGTTAACCC...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | ATGCTAGGTGAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTGCACATCTGGTTTTCTaGAGATATCATCAAGAGCTT | + |
Preference number: 4 (lower is better) Translates to: MLGEQSKSLLPLQLPIKCAHLVF*RYHQEL Trigger: AAGCTCTTGATGATATCTTCAGAAAACCAGATGTGC...ACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTCACCTAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCTTAAAGTGCTTCTCCTaGAGGCCCAGGACCACAGCT | + |
Preference number: 4 (lower is better) Translates to: IRIEANSLKIWSKQVVKFLKCFS*RPRTTA Trigger: AGCTGTGGTCCTGGGCCTTCAGGAGAAGCACTTTAA...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAATGCGATCCAGGCCAGTaGGCTATACATCTCAGTTTG | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYECDPGQ*AIHLSL Trigger: CAAACTGAGATGTATAGCTCACTGGCCTGGATCGCA...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAAAAGGAGGACAAGATGTaGAGGCACTGTCTCACGGAT | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYEKEDKM*RHCLTD Trigger: ATCCGTGAGACAGTGCCTGCACATCTTGTCCTCCTT...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | ATGCTAGGTGAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTGCAAACACCCCCAGATaGCAAATTTCGATAGAAATT | + |
Preference number: 4 (lower is better) Translates to: MLGEQSKSLLPLQLPIKCANTPR*QISIEI Trigger: AATTTCTATCGAAATTTGGCATCTGGGGGTGTTTGC...ACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTCACCTAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | ATGCTAGGTGAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCAGCAAGCTATCATGTaGTGTATACTTTCAAAGCTG | + |
Preference number: 4 (lower is better) Translates to: MLGEQSKSLLPLQLPIKCQQAIM*CILSKL Trigger: CAGCTTTGAAAGTATACAGCACATGATAGCTTGCTG...ACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTCACCTAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATTCAGGCAGCAGCACCTaGTGTGGCTTCTTGGTTCTT | + |
Preference number: 4 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYSGSST*CGFLVL Trigger: AAGAACCAAGAAGCCACAGCAGGTGCTGCTGCCTGA...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGTGCTTCAGTAGTATCTaGAGCTCCCGGGAAAAGTTC | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMCFSSI*SSREKF Trigger: GAACTTTTCCCGGGAGCTGCAGATACTACTGAAGCA...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGTTGGAAATCCATCAATaGATGAAGAAGAGTAGAGCT | + |
Preference number: 4 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMLEIHQ*MKKSRA Trigger: AGCTCTACTCTTCTTCATGCATTGATGGATTTCCAA...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCCATTTTATCAAGATCTaGATGACAGGTACCAAGACG | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLHFIKI*MTGTKT Trigger: CGTCTTGGTACCTGTCATCCAGATCTTGATAAAATG...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCAAGTTTCTGGAGAGGTaGGGCTGCATGACTCTTCGG | + |
Preference number: 4 (lower is better) Translates to: IRIEANSLKIWSKQVVKFKFLER*GCMTLR Trigger: CCGAAGAGTCATGCAGCCCCACCTCTCCAGAAACTT...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGCAGGGAGACATCAAATaGAACCTTGGTCATTGGAGG | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMQGDIK*NLGHWR Trigger: CCTCCAATGACCAAGGTTCCATTTGATGTCTCCCTG...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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3UTR CAA 72 bp | AAGCCTCTGTTTATTAGCTCTTCAAGTGCCTGCATGTaGTCTTTATGGGTGAGAGGTTTTCCAGAATCGAAT | + |
Preference number: 4 (lower is better) Translates to: KPLFISSSSACM*SLWVRGFPESN Trigger: ATTCGATTCTGGAAAACCTCTCACCCATAAAGACAACATGCAGGCACTTGAAGAGCTAATAAACAGAGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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3UTR CAA 72 bp | ATCTCGATCACTATGGCTTTAAACTTACTGGGAGACTaGAGTGCCCTCCTAGAAATGACAGTCTCCTTATAT | + |
Preference number: 4 (lower is better) Translates to: ISITMALNLLGD*SALLEMTVSLY Trigger: ATATAAGGAGACTGTCATTTCTAGGAGGGCACTCAAGTCTCCCAGTAAGTTTAAAGCCATAGTGATCGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS-3UTR TCA 90 bp | GAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTCGAATACTCCTCTTTTaGAGATCATCACAGCCATCT | + |
Preference number: 4 (lower is better) Translates to: EMHTSFFYFTHFSTYQQCRILLF*RSSQPS Trigger: AGATGGCTGTGATGATCTTCAAAAGAGGAGTATTCG...ACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | GAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTACACAGACACAGAAATaGAGAATTGCTGCCAAGCTA | + |
Preference number: 4 (lower is better) Translates to: EMHTSFFYFTHFSTYQQCTQTQK*RIAAKL Trigger: TAGCTTGGCAGCAATTCTTCATTTCTGTGTCTGTGT...ACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATCTTCACTGTAGTCTTTaGAACCAGGAGGTGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYLHCSL*NQEVRS Trigger: GCTCCTCACCTCCTGGTTTCAAAGACTACAGTGAAG...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAGAGAGGCGGGTAAATaGGAATTGGTTTCGTTGTCT | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMREAGK*ELVSLS Trigger: AGACAACGAAACCAATTCTCATTTACCCGCCTCTCT...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAAACCTGCACCCTGATGTaGTATCCAGCATCTTTTTCC | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYETCTLM*YPASFS Trigger: GGAAAAAGATGCTGGATATCACATCAGGGTGCAGGT...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTGGCTTCTTGGTTCTTaGAGTTTTCTTAGAACAAAC | + |
Preference number: 4 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTWLLGS*SFLRTN Trigger: GTTTGTTCTAAGAAAACTTCAAGAACCAAGAAGCCA...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCCTCAAGAAGTATTTaGTGGAATCTCTTTCGTCTA | + |
Preference number: 4 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTSSRSI*WNLFRL Trigger: TAGACGAAAGAGATTCCATCAAATACTTCTTGAGGA...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCGTACATTATTTTTGGTaGAGGATCGGGAATACAGTT | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLVHYFW*RIGNTV Trigger: AACTGTATTCCCGATCCTTCACCAAAAATAATGTAC...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAACACCTCAGCCAAAGGTaGATATTGAAGTATTCCCGG | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYEHLSQR*ILKYSR Trigger: CCGGGAATACTTCAATATTCACCTTTGGCTGAGGTG...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
||
CDS-3UTR TCA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTATGTTTTCCAAACCTTaGAGAAGTTCCCTTGGAAAT | + |
Preference number: 4 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTMFSKP*RSSLGN Trigger: ATTTCCAAGGGAACTTCTTCAAGGTTTGGAAAACAT...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAAGAAAAGGCTTCCTACTaGCACAATGCAACCATTCGC | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYEEKASY*HNATIR Trigger: GCGAATGGTTGCATTGTGTCAGTAGGAAGCCTTTTC...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTTGTGAGAATATTTTaGGAAGTCGTTTTTGGGTAT | + |
Preference number: 4 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMLVRIF*EVVFGY Trigger: ATACCCAAAAACGACTTCGCAAAATATTCTCACAAG...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAAAGCCCTTTTCTTATCTaGAAAGAGGAGGAGGCTTCC | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYESPFLI*KEEEAS Trigger: GGAAGCCTCCTCCTCTTTGCAGATAAGAAAAGGGCT...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAGTTCCAGAAGACCCTaGAACAATTCTGCAGTAGAG | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMSSRRP*NNSAVE Trigger: CTCTACTGCAGAATTGTTGCAGGGTCTTCTGGAACT...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGTCTGTTCCATTGAGGTaGCTAGAGCCTTCTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMSVPLR*LEPSSS Trigger: AGAAGAAGAAGGCTCTAGCCACCTCAATGGAACAGA...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCTCTGCTTTCTTTGACTaGGGGTTGTCCTGCTTCTGG | + |
Preference number: 4 (lower is better) Translates to: IRIEANSLKIWSKQVVKFSAFFD*GLSCFW Trigger: CCAGAAGCAGGACAACCCCCAGTCAAAGAAAGCAGA...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | GCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATCAGTTTCTGACTATGTCTTaGCAAATGACAGACACAAAA | + |
Preference number: 4 (lower is better) Translates to: APSPVTNQMSLHALLLHQFLTMS*QMTDTK Trigger: TTTTGTGTCTGTCATTTGCCAAGACATAGTCAGAAA...CTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAAGCTCAGCCAGGTTCTTaGGTGTGGAAGAATCAATCT | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYEAQPGS*VWKNQS Trigger: AGATTGATTCTTCCACACCCAAGAACCTGGCTGAGC...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGGGCTCCTTTGATTGCTaGTTTGGAGAACATCTTGTG | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMGSFDC*FGEHLV Trigger: CACAAGATGTTCTCCAAACCAGCAATCAAAGGAGCC...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATCATCAAATGGAACCTTaGTCATTGGAGGAGGGGGCT | + |
Preference number: 4 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYHQMEP*SLEEGA Trigger: AGCCCCCTCCTCCAATGACCAAGGTTCCATTTGATG...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATTGCTTCTGGAGAAAGTaGATAAGCTGTCCAGCTAGG | + |
Preference number: 4 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYCFWRK*ISCPAR Trigger: CCTAGCTGGACAGCTTATTCACTTTCTCCAGAAGCA...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CACTTGTGGTGGTTAACTTTTAGTGTTACTTCTCATCATCAGCTTCATTCGGCCATAGATATTTTCCTCTaGAGTAACTTCAGGAACCGA | + |
Preference number: 4 (lower is better) Translates to: HLWWLTFSVTSHHQLHSAIDIFL*SNFRNR Trigger: TCGGTTCCTGAAGTTACTTCAGAGGAAAATATCTAT...GGCCGAATGAAGCTGATGATGAGAAGTAACACTAAAAGTTAACCACCACAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS-3UTR TCA 90 bp | TCCAACATAGACCCAGATCTACAAGATTCCAAAGCTAGTACAATAATTCTCTGCTTACAGTTAACTCTGTaGAACACTCAGTGCTTCTGG | + |
Preference number: 4 (lower is better) Translates to: SNIDPDLQDSKASTIILCLQLTL*NTQCFW Trigger: CCAGAAGCACTGAGTGTTTCACAGAGTTAACTGTAA...GCAGAGAATTATTGTACTAGCTTTGGAATCTTGTAGATCTGGGTCTATGTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGTCTGCTGTGTCGGACTaGTCTGTTATGATATTTGGA | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMSAVSD*SVMIFG Trigger: TCCAAATATCATAACAGATCAGTCCGACACAGCAGA...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAATTGACACCATCCAGTTaGAAAGGCTTCCTACTGACA | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYELTPSS*KGFLLT Trigger: TGTCAGTAGGAAGCCTTTTCAACTGGATGGTGTCAA...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCTTTACATCTTCTTTATaGTCGTCGAAATCAGCAATG | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLFTSSL*SSKSAM Trigger: CATTGCTGATTTCGACGAGCATAAAGAAGATGTAAA...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | CTGAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTTTGTCATGTAGAAGATaGAGCAAGCTATCATGTGCT | + |
Preference number: 4 (lower is better) Translates to: LRCTPHFSTSLTLVHTSSLSCRR*SKLSCA Trigger: AGCACATGATAGCTTGCTGCATCTTCTACATGACAA...ACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | CTGAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTTCTGCAGTTTCCTCTTaGTCAATACCAAAAAGAGAC | + |
Preference number: 4 (lower is better) Translates to: LRCTPHFSTSLTLVHTSSSAVSS*SIPKRD Trigger: GTCTCTTTTTGGTATTGAGCAAGAGGAAACTGCAGA...ACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCAGGAATCTTGGTCTTTaGTTAAATTTCATGACTTCC | + |
Preference number: 4 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLRNLGL*LNFMTS Trigger: GGAAGTCATGAAATTTAAGCAAAGACCAAGATTCCT...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTAATCTTCTGTATCTGTaGTTTGGTTGTGCTTCTTTT | + |
Preference number: 4 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTNLLYL*FGCASF Trigger: AAAAGAAGCACAACCAAACCACAGATACAGAAGATT...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGTTGTATTCTTTTATTTaGCAGAGGCTGTCTCCAACC | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMLYSFI*QRLSPT Trigger: GGTTGGAGACAGCCTCTGTCAAATAAAAGAATACAA...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATTTTCCAGGGTCTCTCTaGAGCATCTCAAAGTGTCAT | + |
Preference number: 4 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYFPGSL*SISKCH Trigger: ATGACACTTTGAGATGCTTCAGAGAGACCCTGGAAA...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | TCTCCTTTTCAAGAAGTCATAAACAGGGGCAGATATCTCCACCATGAGATGAAAGCTCATGCCAATGATTaGTTTATCAAGGAGTTCATA | + |
Preference number: 4 (lower is better) Translates to: SPFQEVINRGRYLHHEMKAHAND*FIKEFI Trigger: TATGAACTCCTTGATAAAGCAATCATTGGCATGAGC...TTTCATCTCATGGTGGAGATATCTGCCCCTGTTTATGACTTCTTGAAAAGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS-3UTR GCA 90 bp | CTGAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTCTTAACTTTCATTGTTaGTTTGTAGCCAGCAGGTAT | + |
Preference number: 4 (lower is better) Translates to: LRCTPHFSTSLTLVHTSSLNFHC*FVASRY Trigger: ATACCTGCTGGCTACAAAGCAACAATGAAAGTTAAG...ACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATCACTTCATATTCCTCTaGTGCGGTTGCTTTACAGAC | + |
Preference number: 4 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYHFIFL*CGCFTD Trigger: GTCTGTAAAGCAACCGCAGCAGAGGAATATGAAGTG...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | ATGATGGAAATTAAGTTCAGAGCTTCAGGCTTGATACACAGCAGTCTACCACTCTTTCTGACTATGTCTTaGCAAATGACAGACACAAAA | + |
Preference number: 4 (lower is better) Translates to: MMEIKFRASGLIHSSLPLFLTMS*QMTDTK Trigger: TTTTGTGTCTGTCATTTGCCAAGACATAGTCAGAAA...GAGTGGTAGACTGCTGTGTATCAAGCCTGAAGCTCTGAACTTAATTTCCATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR CCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAAGTGAGAAGACTTTCTTaGCCATCTCATAGTTACCGA | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYEVRRLS*PSHSYR Trigger: TCGGTAACTATGAGATGGCCAAGAAAGTCTTCTCAC...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATTGTCTGCCAAGATGTTaGAATGAAGCCTTTTCTGCG | + |
Preference number: 4 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYCLPRC*NEAFSA Trigger: CGCAGAAAAGGCTTCATTCCAACATCTTGGCAGACA...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGTGCATGTTGTCTTTATaGGTGAGAGGTTTTCCAGAA | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMCMLSL*VRGFPE Trigger: TTCTGGAAAACCTCTCACCCATAAAGACAACATGCA...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAAAGTTTGAGTTGCTACTaGGTCTTTAACAGAGCTGTG | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYESLSCY*VFNRAV Trigger: CACAGCTCTGTTAAAGACCCAGTAGCAACTCAAACT...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGGAAATAATATTGAACTaGATGGCAAGAGACACCAGA | + |
Preference number: 4 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMEIILN*MARDTR Trigger: TCTGGTGTCTCTTGCCATTCAGTTCAATATTATTTC...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | TCCAACATAGACCCAGATCTACAAGATTCCAAAGCTAGTACAATAATTCTCTGCACAGAAATGAAGAATTaGTGCCAAGCTAAAAGTGTC | + |
Preference number: 4 (lower is better) Translates to: SNIDPDLQDSKASTIILCTEMKN*CQAKSV Trigger: GACACTTTTAGCTTGGCAGCAATTCTTCATTTCTGT...GCAGAGAATTATTGTACTAGCTTTGGAATCTTGTAGATCTGGGTCTATGTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | CTGAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTAAAATATTGGTACAGTaGAAGAAGAGGCAGAACTAT | + |
Preference number: 4 (lower is better) Translates to: LRCTPHFSTSLTLVHTSSKILVQ*KKRQNY Trigger: ATAGTTCTGCCTCTTCTTGCACTGTACCAATATTTT...ACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | ATTATTTTTGGTGAAGGATCGGGAATACAGTTGATTGTCGCAGCCAAACTTATGCTTAACTTTCATTGTTaGTTTGTAGCCAGCAGGTAT | + |
Preference number: 4 (lower is better) Translates to: IIFGEGSGIQLIVAAKLMLNFHC*FVASRY Trigger: ATACCTGCTGGCTACAAAGCAACAATGAAAGTTAAG...CATAAGTTTGGCTGCGACAATCAACTGTATTCCCGATCCTTCACCAAAAATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR GCA 90 bp | GAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTATTTATAAGCATTATTaGCAGGTCATACTCCTTCCA | + |
Preference number: 4 (lower is better) Translates to: EMHTSFFYFTHFSTYQQCIYKHY*QVILLP Trigger: TGGAAGGAGTATGACCTGGCAATAATGCTTATAAAT...ACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | TCCAACATAGACCCAGATCTACAAGATTCCAAAGCTAGTACAATAATTCTCTGCATCTGTTATGATATTTaGACTTTTCCAGGGTCTCTC | + |
Preference number: 4 (lower is better) Translates to: SNIDPDLQDSKASTIILCICYDI*TFPGSL Trigger: GAGAGACCCTGGAAAAGTCCAAATATCATAACAGAT...GCAGAGAATTATTGTACTAGCTTTGGAATCTTGTAGATCTGGGTCTATGTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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3UTR CAA 72 bp | CATAATTTGTGTAAAGAATTCCAGGAATCTTGGTCTTaGCTTAAATTTCATGACTTCCTTCATGGCGCCCTT | + |
Preference number: 4 (lower is better) Translates to: HNLCKEFQESWS*LKFHDFLHGAL Trigger: AAGGGCGCCATGAAGGAAGTCATGAAATTTAAGCAAAGACCAAGATTCCTGGAATTCTTTACACAAATTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS-3UTR GCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAAGCTCATGCCAATGATTaGTTTATCAAGGAGTTCATA | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYEAHAND*FIKEFI Trigger: TATGAACTCCTTGATAAAGCAATCATTGGCATGAGC...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCTTAAGTCTGAACTCTTaGCAATCTCGATCACTATGG | + |
Preference number: 4 (lower is better) Translates to: IRIEANSLKIWSKQVVKFLSLNS*QSRSLW Trigger: CCATAGTGATCGAGATTGGCAAGAGTTCAGACTTAA...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR GCA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAAATAGAGTTTGTGCTCTaGAGCTTTATCAACATGTCA | + |
Preference number: 4 (lower is better) Translates to: HTSFFYFTHFSTYQQCYEIEFVL*SFINMS Trigger: TGACATGTTGATAAAGCTGCAGAGCACAAACTCTAT...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATCAGCCATCTTTATCGTaGCCTCTCTGTAATATTTTC | + |
Preference number: 4 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYQPSLS*PLCNIF Trigger: GAAAATATTACAGAGAGGCCACGATAAAGATGGCTG...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR TCA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCATAGATATTTTCCTCTaGAGTAACTTCAGGAACCGA | + |
Preference number: 4 (lower is better) Translates to: IRIEANSLKIWSKQVVKFIDIFL*SNFRNR Trigger: TCGGTTCCTGAAGTTACTTCAGAGGAAAATATCTAT...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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3UTR CAA 72 bp | ATGAAACTTCTCATCGTTCATGCATTTGAGCATAATTaGTGTAAAGAATTCCAGGAATCTTGGTCTTTGCTT | + |
Preference number: 4 (lower is better) Translates to: MKLLIVHAFEHN*CKEFQESWSLL Trigger: AAGCAAAGACCAAGATTCCTGGAATTCTTTACACAAATTATGCTCAAATGCATGAACGATGAGAAGTTTCAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS-3UTR CCA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCTTAGATAATTTTCAATaGACTGTGTCTCCTTATCGG | + |
Preference number: 4 (lower is better) Translates to: IRIEANSLKIWSKQVVKFLDNFQ*TVSPYR Trigger: CCGATAAGGAGACACAGTCCATTGAAAATTATCTAA...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCTCTGTATCTGTGGTTTaGTTGTGCTTCTTTTTCTTA | + |
Preference number: 4 (lower is better) Translates to: IRIEANSLKIWSKQVVKFSVSVV*LCFFFL Trigger: TAAGAAAAAGAAGCACAACCAAACCACAGATACAGA...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CCA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCAGATGCATTTCTTTTTaGCGCAAAATCAATTCAGAG | + |
Preference number: 4 (lower is better) Translates to: IRIEANSLKIWSKQVVKFRCISF*RKINSE Trigger: CTCTGAATTGATTTTGCGCCAAAAAGAAATGCATCT...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS CCA 90 bp | CGGCGTTGGGGGCAGATGCACCGGCGACACCGATGTCTCAGAGTCTaGGGACTCCTCAGAAGAACTGGAGGAGCTTCTGGAGGACGCCAT | + |
Preference number: 5 (lower is better) Translates to: RRWGQMHRRHRCLRV*GLLRRTGGASGGRH Trigger: ATGGCGTCCTCCAGAAGCTCCTCCAGTTCTTCTGAGGAGTCCCCAGACTCTGAGACATCGGTGTCGCCGGTGCATCTGCCCCCAACGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS CCA 90 bp | AAAGCCCAACAGCTCCCGGATCTCCTTCTCGCAAGAGGCCAGGAGTaGGTTTTTACTGTCCAGGGGCCCGTAGAAGGCGGCAGAGGGCAG | + |
Preference number: 5 (lower is better) Translates to: KAQQLPDLLLARGQE*VFTVQGPVEGGRGQ Trigger: CTGCCCTCTGCCGCCTTCTACGGGCCCCTGGACAGTAAAAACCCACTCCTGGCCTCTTGCGAGAAGGAGATCCGGGAGCTGTTGGGCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS TCA 90 bp | ACTGGCAGACGGCAGTGTAGAGAGTGGCTCTCCATGTCAGGTACCTaGTGGACAGGAGCGGGACAGAGGACTCCATGCACATGCTGGCCC | + |
Preference number: 5 (lower is better) Translates to: TGRRQCREWLSMSGT*WTGAGQRTPCTCWP Trigger: GGGCCAGCATGTGCATGGAGTCCTCTGTCCCGCTCCTGTCCATCAGGTACCTGACATGGAGAGCCACTCTCTACACTGCCGTCTGCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | GCACCTGGGACAGCAAGCTACGGAGAAAGACCGGGTCTCACTGCAGGTCGCACCTTGTTGCCTTGGTCATaGGAGGAGGGGGCTCATTGT | + |
Preference number: 5 (lower is better) Translates to: APGTASYGERPGLTAGRTLLPWS*EEGAHC Trigger: ACAATGAGCCCCCTCCTCCAATGACCAAGGCAACAA...GGTGCGACCTGCAGTGAGACCCGGTCTTTCTCCGTAGCTTGCTGTCCCAGGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS GCA 90 bp | ACCACATCACGCAGCTCCATTTCGTCAGTAACCAGCGGTCCAGTCTaGAGGATCCGCCTGTTTGAGTCAGAGAGGGCTTCCAAGACAGCC | + |
Preference number: 5 (lower is better) Translates to: TTSRSSISSVTSGPV*RIRLFESERASKTA Trigger: GGCTGTCTTGGAAGCCCTCTCTGACTCAAACAGGCGGATCCTGCAGACTGGACCGCTGGTTACTGACGAAATGGAGCTGCGTGATGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | GAGCCCGTAGCACTGGGTCACTGCTTGGAGGGCGAAGTTGGCGTCATTGAGGAATTTCTGGGACCCCTTTaGAAGTCCCAGGCAACTCGT | + |
Preference number: 5 (lower is better) Translates to: EPVALGHCLEGEVGVIEEFLGPL*KSQATR Trigger: ACGAGTTGCCTGGGACTTCAAAAGGGGTCCCAGAAA...TTCCTCAATGACGCCAACTTCGCCCTCCAAGCAGTGACCCAGTGCTACGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS TCA 90 bp | AGCTCAGGGCCATTCAGCTCTTTTATCCTCTGGACCAGTTGGCGCTaGGCATACACCAACAGCGGGGTCACTTGCTCTGTGTACCTCTCA | + |
Preference number: 5 (lower is better) Translates to: SSGPFSSFILWTSWR*AYTNSGVTCSVYLS Trigger: TGAGAGGTACACAGAGCAAGTGACCCCGCTGTTGGTGTATGCTCAGCGCCAACTGGTCCAGAGGATAAAAGAGCTGAATGGCCCTGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 90 bp | CAGGTGATCTTCTCTCCATTTTCAGCCTCGTATCTGGCGCAAGCCTaGCGGGAGAGCTCAGGGCCATTCAGCTCTTTTATCCTCTGGACC | + |
Preference number: 5 (lower is better) Translates to: QVIFSPFSASYLAQA*RESSGPFSSFILWT Trigger: GGTCCAGAGGATAAAAGAGCTGAATGGCCCTGAGCTCTCCCGTCAGGCTTGCGCCAGATACGAGGCTGAAAATGGAGAGAAGATCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCAGGTCGGCGGCGGCGTaGGGGGCAGATGCACCGGCG | + |
Preference number: 5 (lower is better) Translates to: IRIEANSLKIWSKQVVKFRSAAA*GADAPA Trigger: CGCCGGTGCATCTGCCCCCAACGCCGCCGCCGACCT...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | TCCAGGGGACTCACCTGTATGCTGGCCTGTATCTCTGCAGGGCGATTGCTGCCAGATATCATCAAGAGCTaGGCTCCAGCATTTAAAAGC | + |
Preference number: 5 (lower is better) Translates to: SRGLTCMLACISAGRLLPDIIKS*APAFKS Trigger: GCTTTTAAATGCTGGAGCCAAGCTCTTGATGATATC...TGGCAGCAATCGCCCTGCAGAGATACAGGCCAGCATACAGGTGAGTCCCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR CAA 90 bp | ATCATCAGCTTCATTCGGCCGCGAGATGGCGAGGAGCTAAGTCAAGCACACTTCGGAGGAGGGGGCTCATaGTCTTTGTCTTTGTTGTTG | + |
Preference number: 5 (lower is better) Translates to: IISFIRPRDGEELSQAHFGGGGS*SLSLLL Trigger: CAACAACAAAGACAAAGACAATGAGCCCCCTCCTCC...GAAGTGTGCTTGACTTAGCTCCTCGCCATCTCGCGGCCGAATGAAGCTGATGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS-3UTR CAA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCTCCTCATTCTGCAGGTaGGCATCGCTTTCGCAGACC | + |
Preference number: 5 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFSSFCR*ASLSQT Trigger: GGTCTGCGAAAGCGATGCCAACCTGCAGAATGAGGA...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GCTGCCAGGTGTAGCCTAGCCTCCACCATGATCTCCAGCTCCAAAACAGAGGACAACTTTAAGGCTCCTTaGATTGCTGGTTTGGAGAAC | + |
Preference number: 5 (lower is better) Translates to: AARCSLASTMISSSKTEDNFKAP*IAGLEN Trigger: GTTCTCCAAACCAGCAATCAAAGGAGCCTTAAAGTT...GTCCTCTGTTTTGGAGCTGGAGATCATGGTGGAGGCTAGGCTACACCTGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR CAA 90 bp | TGCAGCCCTTCAGTTTGCTTGCGCTCTGGTGACTGCAGGGAGCTCTCAGCCCTGTTGCCAGTAGAAACTTaGATATCTAAAATCCTCAGG | + |
Preference number: 5 (lower is better) Translates to: CSPSVCLRSGDCRELSALLPVET*ISKILR Trigger: CCTGAGGATTTTAGATATCAAAGTTTCTACTGGCAA...CAGGGCTGAGAGCTCCCTGCAGTCACCAGAGCGCAAGCAAACTGAAGGGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS-3UTR CAA 90 bp | GTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCGCGAAGTTGGCGTCATaGAGGAAGTTGCTGAGCTCC | + |
Preference number: 5 (lower is better) Translates to: VKKPAPSPVTNQMSLHALAKLAS*RKLLSS Trigger: GGAGCTCAGCAACTTCCTCAATGACGCCAACTTCGC...GAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS TCA 90 bp | GAACCGCCATTTCTGATGAGATTTCTGTATAAGATGGGCAGACGGTaGGCTTGCCAGATAAGTCAGACTGCAGGGAGCTGTCCCGATGAA | + |
Preference number: 5 (lower is better) Translates to: EPPFLMRFLYKMGRR*ACQISQTAGSCPDE Trigger: TTCATCGGGACAGCTCCCTGCAGTCTGACTTATCTGGCAAGCTCACCGTCTGCCCATCTTATACAGAAATCTCATCAGAAATGGCGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163209.3 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 90 bp | GCAGCTCGTATTGCGATCCAGGCCAGTGAGCTATACATCTCAGTTTaGGTTGCTACTGGGTCTTTAACAGAGCTGTGCCTTCTGGGAAGA | + |
Preference number: 5 (lower is better) Translates to: AARIAIQASELYISV*VATGSLTELCLLGR Trigger: TCTTCCCAGAAGGCACAGCTCTGTTAAAGACCCAGTAGCAACTCAAACTGAGATGTATAGCTCACTGGCCTGGATCGCAATACGAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 90 bp | TTTCGGGAGGTTTCCAGAGACGACGAGGAGCTCATTAATTCCAGCTaGCTTAACTCATCAATTTTAGCTAGCGCACGCCGAGCAAATGCC | + |
Preference number: 5 (lower is better) Translates to: FREVSRDDEELINSS*LNSSILASARRANA Trigger: GGCATTTGCTCGGCGTGCGCTAGCTAAAATTGATGAGTTAAGGCAGCTGGAATTAATGAGCTCCTCGTCGTCTCTGGAAACCTCCCGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS GCA 90 bp | TTTTCCCAACCTTTGGCAGGAGTGTTTGTGCTAACAGTTGGAGCCTaGAAAACTTCCAGTTGGTCAAGGAGCACAACGGCTATACGGTGC | + |
Preference number: 5 (lower is better) Translates to: FSQPLAGVFVLTVGA*KTSSWSRSTTAIRC Trigger: GCACCGTATAGCCGTTGTGCTCCTTGACCAACTGGAAGTTTTGCAGGCTCCAACTGTTAGCACAAACACTCCTGCCAAAGGTTGGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | GCTGCCAGGTGTAGCCTAGCCTCCACCATGATCTCCAGCTCCAAAACAGAGGACCCTTTGATTGCTGGTTaGGAGAACATCAATAGTTTG | + |
Preference number: 5 (lower is better) Translates to: AARCSLASTMISSSKTEDPLIAG*ENINSL Trigger: CAAACTATTGATGTTCTCCAAACCAGCAATCAAAGG...GTCCTCTGTTTTGGAGCTGGAGATCATGGTGGAGGCTAGGCTACACCTGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR CAA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCGGGCAGACGGTGAGCTaGCCAGATAAGTCAGACTGC | + |
Preference number: 5 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLGQTVS*PDKSDC Trigger: GCAGTCTGACTTATCTGGCAAGCTCACCGTCTGCCC...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCGCGTCATTGAGGAAGTaGCTGAGCTCCAGAGCTACT | + |
Preference number: 5 (lower is better) Translates to: VKKPAPSPVTNQMSLHALASLRK*LSSRAT Trigger: AGTAGCTCTGGAGCTCAGCAACTTCCTCAATGACGC...GAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATCAGCTTCTGGGAAGAGGCTaGAGTGTTGTGGCTGAAGCC | + |
Preference number: 5 (lower is better) Translates to: APSPVTNQMSLHALLLHQLLGRG*SVVAEA Trigger: GGCTTCAGCCACAACACTCAAGCCTCTTCCCAGAAG...CTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS TCA 90 bp | GCGATGAACGAAGTTACCAGCATCAAGCGGCACCTCAGCCAAAGGTaGATATTGAAGTATTCCCGGGAGTTCAGGGAAATGGGGTCTAAA | + |
Preference number: 5 (lower is better) Translates to: AMNEVTSIKRHLSQR*ILKYSREFREMGSK Trigger: TTTAGACCCCATTTCCCTGAACTCCCGGGAATACTTCAATATTCACCTTTGGCTGAGGTGCCGCTTGATGCTGGTAACTTCGTTCATCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 90 bp | ATTTCCTTAAGCTTTTGTATGATGTCTGCCTTAAAGTGCTTCTCCTaGAGGCCCAGGACCACAGCTTGCATTAGGAACTCGGCCAGGACC | + |
Preference number: 5 (lower is better) Translates to: ISLSFCMMSALKCFS*RPRTTACIRNSART Trigger: GGTCCTGGCCGAGTTCCTAATGCAAGCTGTGGTCCTGGGCCTTCAGGAGAAGCACTTTAAGGCAGACATCATACAAAAGCTTAAGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | GAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTGTGCAGCAGCTCGTATaGCGATCCAGGCCAGTGAGC | + |
Preference number: 5 (lower is better) Translates to: EMHTSFFYFTHFSTYQQCVQQLV*RSRPVS Trigger: GCTCACTGGCCTGGATCGCAATACGAGCTGCTGCAC...ACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGACATCAAATGGAACCTaGGTCATTGGAGGAGGGGGC | + |
Preference number: 5 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMTSNGT*VIGGGG Trigger: GCCCCCTCCTCCAATGACCAAGGTTCCATTTGATGT...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS TCA 90 bp | GGTAAGGATATCTCGGCTATTTGTGCAAGATTAGATAGTTTCTGGTaGACTGCAATGACGCTCCTCAGTGGAATCCAGGAGGTGCCAACG | + |
Preference number: 5 (lower is better) Translates to: GKDISAICARLDSFW*TAMTLLSGIQEVPT Trigger: CGTTGGCACCTCCTGGATTCCACTGAGGAGCGTCATTGCAGTTCACCAGAAACTATCTAATCTTGCACAAATAGCCGAGATATCCTTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163209.3 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 90 bp | ACGAAGTTACCAGCATCAAGCGGCACCTCAGCCAAAGGTGAATATTaGAGTATTCCCGGGAGTTCAGGGAAATGGGGTCTAAAAACTCAC | + |
Preference number: 5 (lower is better) Translates to: TKLPASSGTSAKGEY*SIPGSSGKWGLKTH Trigger: GTGAGTTTTTAGACCCCATTTCCCTGAACTCCCGGGAATACTTCAATATTCACCTTTGGCTGAGGTGCCGCTTGATGCTGGTAACTTCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 90 bp | AGATTCACTGACCTGTGCAGCAGCTCGTATTGCGATCCAGGCCAGTaGGCTATACATCTCAGTTTGAGTTGCTACTGGGTCTTTAACAGA | + |
Preference number: 5 (lower is better) Translates to: RFTDLCSSSYCDPGQ*AIHLSLSCYWVFNR Trigger: TCTGTTAAAGACCCAGTAGCAACTCAAACTGAGATGTATAGCTCACTGGCCTGGATCGCAATACGAGCTGCTGCACAGGTCAGTGAATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 90 bp | GCATATTTGGTCCAGATATTAAACAGCGTGGTGGCACACCTCCGATaGAATTCGTACTTCTGTTCCATTGAGGTGGCTAGAGCCTTCTTC | + |
Preference number: 5 (lower is better) Translates to: AYLVQILNSVVAHLR*NSYFCSIEVARAFF Trigger: GAAGAAGGCTCTAGCCACCTCAATGGAACAGAAGTACGAATTCCATCGGAGGTGTGCCACCACGCTGTTTAATATCTGGACCAAATATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS CCA 90 bp | CTGGGTGATTTCGTACTGAGCATAGTTACGTTCGGCTTTGGGATGTaGGAGTGTAGTACGGAGCAGACTCTGAAAAAGCAATGCAGACAA | + |
Preference number: 5 (lower is better) Translates to: LGDFVLSIVTFGFGM*ECSTEQTLKKQCRQ Trigger: TTGTCTGCATTGCTTTTTCAGAGTCTGCTCCGTACTACACTCCCACATCCCAAAGCCGAACGTAACTATGCTCAGTACGAAATCACCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | GAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTGCAGGATCCGCCTGTTaGAGTCAGAGAGGGCTTCCA | + |
Preference number: 5 (lower is better) Translates to: EMHTSFFYFTHFSTYQQCAGSAC*SQRGLP Trigger: TGGAAGCCCTCTCTGACTCAAACAGGCGGATCCTGC...ACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTCCTTCTCTGCTTTCTTaGACTGGGGGTTGTCCTGCT | + |
Preference number: 5 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTPSLLS*TGGCPA Trigger: AGCAGGACAACCCCCAGTCAAAGAAAGCAGAGAAGG...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTGTGATCATCGCCGCTaGCAAACACCCCCAGATGCC | + |
Preference number: 5 (lower is better) Translates to: EMHTSFFYFTHFSTYQQCCDHRR*QTPPDA Trigger: GGCATCTGGGGGTGTTTGCAAGCGGCGATGATCACA...ACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | CTTCATTCGGCCGCGAGATGGCGAGGAGCTAAGTCAAGCACACTTCTGAGTGACTCATTGTCTTTGTCTTaGTTGTTGGAAAACAGAGCT | + |
Preference number: 5 (lower is better) Translates to: LHSAARWRGAKSSTLLSDSLSLS*LLENRA Trigger: AGCTCTGTTTTCCAACAACAAAGACAAAGACAATGA...GTCACTCAGAAGTGTGCTTGACTTAGCTCCTCGCCATCTCGCGGCCGAATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS-3UTR CAA 90 bp | CATGGTCTTTGTCCCCTTGCTCTTCTAAGTTTATTTGTGACAGCCTTTGCACAGTCAGGAGTAGCGTTGTaGCCTTGGTCATTGGAGGAG | + |
Preference number: 5 (lower is better) Translates to: HGLCPLALLSLFVTAFAQSGVAL*PWSLEE Trigger: CTCCTCCAATGACCAAGGCAACAACGCTACTCCTGA...CTGTGCAAAGGCTGTCACAAATAAACTTAGAAGAGCAAGGGGACAAAGACCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS-3UTR CAA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCTTTGGGAGGTGGTTGTaGTTCAGCCTTACTTTCCCA | + |
Preference number: 5 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFFGRWL*FSLTFP Trigger: TGGGAAAGTAAGGCTGAACAACAACCACCTCCCAAA...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATCAGCTGATGTCCTTCTTCTaGCTGCTGGAACATACCTGC | + |
Preference number: 5 (lower is better) Translates to: APSPVTNQMSLHALLLHQLMSFF*LLEHTC Trigger: GCAGGTATGTTCCAGCAGCAAGAAGAAGGACATCAG...CTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS CCA 90 bp | CTTTACTTTTTCCCAACCTTTGGCAGGAGTGTTTGTGCTAACAGTTaGAGCCTGCAAAACTTCCAGTTGGTCAAGGAGCACAACGGCTAT | + |
Preference number: 5 (lower is better) Translates to: LYFFPTFGRSVCANS*SLQNFQLVKEHNGY Trigger: ATAGCCGTTGTGCTCCTTGACCAACTGGAAGTTTTGCAGGCTCCAACTGTTAGCACAAACACTCCTGCCAAAGGTTGGGAAAAAGTAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 90 bp | AAAAAGTCTCTCGAGGCTGAATATAGCAGGCAGGGAGACATCAAATaGAACCTTGGTCATTGGAGGAGGGGGCTCATTGTCTTTGTCTTT | + |
Preference number: 5 (lower is better) Translates to: KKSLEAEYSRQGDIK*NLGHWRRGLIVFVF Trigger: AAAGACAAAGACAATGAGCCCCCTCCTCCAATGACCAAGGTTCCATTTGATGTCTCCCTGCCTGCTATATTCAGCCTCGAGAGACTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | CATAATCTATCCTCATATAGTGACCTATCCTCAGAGGCTAGAAGGATGCCTAGCTGTGAGGAGGGAAGTTaGCTTTTCTCCACGGAGCTA | + |
Preference number: 5 (lower is better) Translates to: HNLSSYSDLSSEARRMPSCEEGS*LFSTEL Trigger: TAGCTCCGTGGAGAAAAGCAAACTTCCCTCCTCACA...GCTAGGCATCCTTCTAGCCTCTGAGGATAGGTCACTATATGAGGATAGATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR CAA 90 bp | ATTATTTTTGGTGAAGGATCGGGAATACAGTTGATTGTCGCAGCCAAACTTATGTGTGATCATCGCCGCTaGCAAACACCCCCAGATGCC | + |
Preference number: 5 (lower is better) Translates to: IIFGEGSGIQLIVAAKLMCDHRR*QTPPDA Trigger: GGCATCTGGGGGTGTTTGCAAGCGGCGATGATCACA...CATAAGTTTGGCTGCGACAATCAACTGTATTCCCGATCCTTCACCAAAAATAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR CAA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCCCAACGTACAGGCTGTaGCCAGTAGAAACTTTGATA | + |
Preference number: 5 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFPTYRL*PVETLI Trigger: TATCAAAGTTTCTACTGGCAACAGCCTGTACGTTGG...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGAACTTACTGGGAGACTaGAGTGCCCTCCTAGAAATG | + |
Preference number: 5 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMNLLGD*SALLEM Trigger: CATTTCTAGGAGGGCACTCAAGTCTCCCAGTAAGTT...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCCTCAAATCTACCACGTaGACGTCATCCAAAGGATGT | + |
Preference number: 5 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFLKSTT*TSSKGC Trigger: ACATCCTTTGGATGACGTCAACGTGGTAGATTTGAG...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTAGCTCAGCCAGGTTCTaGGGTGTGGAAGAATCAATC | + |
Preference number: 5 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTSSARF*GVEESI Trigger: GATTGATTCTTCCACACCCAAGAACCTGGCTGAGCT...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTGTCGTCGGCACTCTTaGCCTCTGTGCATACTTCAT | + |
Preference number: 5 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTCRRHS*PLCILH Trigger: ATGAAGTATGCACAGAGGCAAAGAGTGCCGACGACA...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS TCA 90 bp | AGCATACACCAACAGCGGGGTCACTTGCTCTGTGTACCTCTCATGTaGAATAATATTGAACTGAATGGCAAGAGACACCAGAGTTTCCCA | + |
Preference number: 5 (lower is better) Translates to: SIHQQRGHLLCVPLM*NNIELNGKRHQSFP Trigger: TGGGAAACTCTGGTGTCTCTTGCCATTCAGTTCAATATTATTTCACATGAGAGGTACACAGAGCAAGTGACCCCGCTGTTGGTGTATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 90 bp | GCATTTCTTTTTGGCGCAAAATCAATTCAGAGTTGTACAGGGACGTaGGAAGTGTGTCATCAGGCAAAGAAATCCCTGAGACCGGAGTTG | + |
Preference number: 5 (lower is better) Translates to: AFLFGAKSIQSCTGT*EVCHQAKKSLRPEL Trigger: CAACTCCGGTCTCAGGGATTTCTTTGCCTGATGACACACTTCTCACGTCCCTGTACAACTCTGAATTGATTTTGCGCCAAAAAGAAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 90 bp | AAGAACACCCTGGGTAGGGACACAGACACAGAAATGAAGAATTGCTaGCAAGCTAAAAGTGTCTTCCGTGAATGTGGTCCTCATACAAGA | + |
Preference number: 5 (lower is better) Translates to: KNTLGRDTDTEMKNC*QAKSVFRECGPHTR Trigger: TCTTGTATGAGGACCACATTCACGGAAGACACTTTTAGCTTGGCAGCAATTCTTCATTTCTGTGTCTGTGTCCCTACCCAGGGTGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS GCA 90 bp | ATCAAGAGCTTGGCTCCAGCATTTAAAAGCAGCCCTTTTCTTATCTaGAAAGAGGAGGAGGCTTCCAAGAGAATGCAGGGACTGAACTTT | + |
Preference number: 5 (lower is better) Translates to: IKSLAPAFKSSPFLI*KEEEASKRMQGLNF Trigger: AAAGTTCAGTCCCTGCATTCTCTTGGAAGCCTCCTCCTCTTTGCAGATAAGAAAAGGGCTGCTTTTAAATGCTGGAGCCAAGCTCTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 90 bp | GCAGTCTTAATAAACTGCGCTATCTTCGCTGTGATCATCGCCGCTTaGAAACACCCCCAGATGCCAAATTTCGATAGAAATTCTTCACTG | + |
Preference number: 5 (lower is better) Translates to: AVLINCAIFAVIIAA*KHPQMPNFDRNSSL Trigger: CAGTGAAGAATTTCTATCGAAATTTGGCATCTGGGGGTGTTTGCAAGCGGCGATGATCACAGCGAAGATAGCGCAGTTTATTAAGACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 90 bp | CCCTTCCAGCAAACTGATAATTTCCTTAAGCTTTTGTATGATGTCTaGCTTAAAGTGCTTCTCCTGAAGGCCCAGGACCACAGCTTGCAT | + |
Preference number: 5 (lower is better) Translates to: PFQQTDNFLKLLYDV*LKVLLLKAQDHSLH Trigger: ATGCAAGCTGTGGTCCTGGGCCTTCAGGAGAAGCACTTTAAGGCAGACATCATACAAAAGCTTAAGGAAATTATCAGTTTGCTGGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | GAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTTTCTGGGACCCCTTTaGAAGTCCCAGGCAACTCGT | + |
Preference number: 5 (lower is better) Translates to: EMHTSFFYFTHFSTYQQCFLGPL*KSQATR Trigger: ACGAGTTGCCTGGGACTTCAAAAGGGGTCCCAGAAA...ACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTGTGCTCGCTTTAATATaGGAAGGATTTCTGGGACCC | + |
Preference number: 5 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTVLALI*EGFLGP Trigger: GGGTCCCAGAAATCCTTCCAATATTAAAGCGAGCAC...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCCAAGATGTAGGTCCATaGTGTAGCTGTTTGATGCAA | + |
Preference number: 5 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFQDVGP*CSCLMQ Trigger: TTGCATCAAACAGCTACACAATGGACCTACATCTTG...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GTATTAGTCACTGTAGATATCCCAGTTCTAAGTATTTGCTTGTATCAGGCTCTTGGGCAGACGGTGAGCTaGCCAGATAAGTCAGACTGC | + |
Preference number: 5 (lower is better) Translates to: VLVTVDIPVLSICLYQALGQTVS*PDKSDC Trigger: GCAGTCTGACTTATCTGGCAAGCTCACCGTCTGCCC...AAGAGCCTGATACAAGCAAATACTTAGAACTGGGATATCTACAGTGACTAATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS-3UTR CAA 90 bp | GTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCGATAGTTCAGCTGAGTaGATTTGCTTTGTCGTCTTG | + |
Preference number: 5 (lower is better) Translates to: VKKPAPSPVTNQMSLHALDSSAE*ICFVVL Trigger: CAAGACGACAAAGCAAATCAACTCAGCTGAACTATC...GAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGCTGACGTCCGTTCTCTaGTTTCTGTCCAGCTCTGCC | + |
Preference number: 5 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMLTSVL*FLSSSA Trigger: GGCAGAGCTGGACAGAAACAAGAGAACGGACGTCAG...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | TGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCACTCGTGGAAGAATCAATCTaGAGGCGCTTCCCAATGAAG | + |
Preference number: 5 (lower is better) Translates to: CSLTSSGLRCTPHFSTSLVEESI*RRFPMK Trigger: CTTCATTGGGAAGCGCCTCAAGATTGATTCTTCCAC...GAGTGAAGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCTCCGACAGCAGGGAGTaGACCTTCTCCTCTGCCTCC | + |
Preference number: 5 (lower is better) Translates to: IRIEANSLKIWSKQVVKFSDSRE*TFSSAS Trigger: GGAGGCAGAGGAGAAGGTCAACTCCCTGCTGTCGGA...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS TCA 90 bp | TTTTCGGGCTTCCCAAAGACTCTAGTATTTCACTTAATCGTAACGTaGTCTCCGCCACCATCACAATGTCCAGGTCTTCCAGTTTATAGC | + |
Preference number: 5 (lower is better) Translates to: FSGFPKTLVFHLIVT*SPPPSQCPGLPVYS Trigger: GCTATAAACTGGAAGACCTGGACATTGTGATGGTGGCGGAGATCACGTTACGATTAAGTGAAATACTAGAGTCTTTGGGAAGCCCGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000170065.8 ENSMUST00000212902.2 |
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CDS TCA 90 bp | GAGACTTCAACACAAAGTCATGGATCCATCTCAAATCTACCACGTTaGCGTCATCCAAAGGATGTTCAAAGATCAGGCTGGAACCTCCAT | + |
Preference number: 5 (lower is better) Translates to: ETSTQSHGSISNLPR*RHPKDVQRSGWNLH Trigger: ATGGAGGTTCCAGCCTGATCTTTGAACATCCTTTGGATGACGTCAACGTGGTAGATTTGAGATGGATCCATGACTTTGTGTTGAAGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 90 bp | GGGGTCACTTGCTCTGTGTACCTCTCATGTGAAATAATATTGAACTaGATGGCAAGAGACACCAGAGTTTCCCACTTCTCCACTTGGTAT | + |
Preference number: 5 (lower is better) Translates to: GVTCSVYLSCEIILN*MARDTRVSHFSTWY Trigger: ATACCAAGTGGAGAAGTGGGAAACTCTGGTGTCTCTTGCCATTCAGTTCAATATTATTTCACATGAGAGGTACACAGAGCAAGTGACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | GAAGTTTTCTTAGAACAAACACCCTCCTCTGCAGTTTCCTCTTGCTCAATACCAGTGCTCGCTTTAATATaGGAAGGATTTCTGGGACCC | + |
Preference number: 5 (lower is better) Translates to: EVFLEQTPSSAVSSCSIPVLALI*EGFLGP Trigger: GGGTCCCAGAAATCCTTCCAATATTAAAGCGAGCAC...TGGTATTGAGCAAGAGGAAACTGCAGAGGAGGGTGTTTGTTCTAAGAAAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS-3UTR CAA 90 bp | AACAAACACCCTCCTCTGCAGTTTCCTCTTGCTCAATACCAAAAAGAGACCTGCCAAGATGTAGGTCCATaGTGTAGCTGTTTGATGCAA | + |
Preference number: 5 (lower is better) Translates to: NKHPPLQFPLAQYQKETCQDVGP*CSCLMQ Trigger: TTGCATCAAACAGCTACACAATGGACCTACATCTTG...GCAGGTCTCTTTTTGGTATTGAGCAAGAGGAAACTGCAGAGGAGGGTGTTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170065.8 |
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CDS-3UTR CAA 90 bp | CTGAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGGAGGAGGGGGCTCATaGTCTTTGTCTTTGTTGTTG | + |
Preference number: 5 (lower is better) Translates to: LRCTPHFSTSLTLVHTSSGGGGS*SLSLLL Trigger: CAACAACAAAGACAAAGACAATGAGCCCCCTCCTCC...ACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | TCCAACATAGACCCAGATCTACAAGATTCCAAAGCTAGTACAATAATTCTCTGCCTGCAAAACTTCCAGTaGGTCAAGGAGCACAACGGC | + |
Preference number: 5 (lower is better) Translates to: SNIDPDLQDSKASTIILCLQNFQ*VKEHNG Trigger: GCCGTTGTGCTCCTTGACCAACTGGAAGTTTTGCAG...GCAGAGAATTATTGTACTAGCTTTGGAATCTTGTAGATCTGGGTCTATGTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCATGGCTTTGGACAGCTaGTTCTTCTTTATCTTCTTC | + |
Preference number: 5 (lower is better) Translates to: VKKPAPSPVTNQMSLHALMALDS*FFFIFF Trigger: GAAGAAGATAAAGAAGAACAAGCTGTCCAAAGCCAT...GAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTGAAGCCTTCCTCTTaGGCTTCTTCAGATAGAAAT | + |
Preference number: 5 (lower is better) Translates to: EQSKSLLPLQLPIKCHSMLKPSS*ASSDRN Trigger: ATTTCTATCTGAAGAAGCCAAAGAGGAAGGCTTCAG...CATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATCAGCTTGAAGAAGTTCCCTaGGAAATCCATCAATGCATG | + |
Preference number: 5 (lower is better) Translates to: APSPVTNQMSLHALLLHQLEEVP*EIHQCM Trigger: CATGCATTGATGGATTTCCAAGGGAACTTCTTCAAG...CTGATGAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | TCCAACATAGACCCAGATCTACAAGATTCCAAAGCTAGTACAATAATTCTCTGCATGGAACCTTGGTCATaGGAGGAGGGGGCTCATTGT | + |
Preference number: 5 (lower is better) Translates to: SNIDPDLQDSKASTIILCMEPWS*EEGAHC Trigger: ACAATGAGCCCCCTCCTCCAATGACCAAGGTTCCAT...GCAGAGAATTATTGTACTAGCTTTGGAATCTTGTAGATCTGGGTCTATGTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS GCA 90 bp | ATACAACAGTTGATTCTTTTCTTAACATTCGCAGTCTTAATAAACTaGGCTATCTTCGCTGTGATCATCGCCGCTTGCAAACACCCCCAG | + |
Preference number: 5 (lower is better) Translates to: IQQLILFLTFAVLIN*AIFAVIIAACKHPQ Trigger: CTGGGGGTGTTTGCAAGCGGCGATGATCACAGCGAAGATAGCGCAGTTTATTAAGACTGCGAATGTTAAGAAAAGAATCAACTGTTGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 90 bp | TTCTCCACTTGGTATAGAACCTCCAGAGACTTCAACACAAAGTCATaGATCCATCTCAAATCTACCACGTTGACGTCATCCAAAGGATGT | + |
Preference number: 5 (lower is better) Translates to: FSTWYRTSRDFNTKS*IHLKSTTLTSSKGC Trigger: ACATCCTTTGGATGACGTCAACGTGGTAGATTTGAGATGGATCCATGACTTTGTGTTGAAGTCTCTGGAGGTTCTATACCAAGTGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCATTTCTGACTATGTCTaGGCAAATGACAGACACAAA | + |
Preference number: 5 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFISDYV*ANDRHK Trigger: TTTGTGTCTGTCATTTGCCAAGACATAGTCAGAAAT...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | AGGCAGAGAACATGGTTTCCCTCTTCTTCTAGCTTTGAGACCAAAAGACCAAATCCAACGTACAGGCTGTaGCCAGTAGAAACTTTGATA | + |
Preference number: 5 (lower is better) Translates to: RQRTWFPSSSSFETKRPNPTYRL*PVETLI Trigger: TATCAAAGTTTCTACTGGCAACAGCCTGTACGTTGG...ATTTGGTCTTTTGGTCTCAAAGCTAGAAGAAGAGGGAAACCATGTTCTCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS-3UTR CAA 90 bp | CTGAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGAGTTTGGGAGGTGGTaGTTGTTCAGCCTTACTTTC | + |
Preference number: 5 (lower is better) Translates to: LRCTPHFSTSLTLVHTSSEFGRW*LFSLTF Trigger: GAAAGTAAGGCTGAACAACAACCACCTCCCAAACTC...ACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | AGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCTTACTTCCAGGAATCTTGGTCTTaGCTTAAATTTCATGACTTC | + |
Preference number: 5 (lower is better) Translates to: SLLPLQLPIKCHSMLSYFQESWS*LKFHDF Trigger: GAAGTCATGAAATTTAAGCAAAGACCAAGATTCCTG...GAAGTAAGAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCACTCCATGCTCTCGTTTGTGTTTTCATCTaGGGAATGTTATCATCGCTT | + |
Preference number: 5 (lower is better) Translates to: VKKPAPSPVTNQMSLHALVCVFI*GMLSSL Trigger: AAGCGATGATAACATTCCCAAGATGAAAACACAAAC...GAGAGCATGGAGTGACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTAGCCTGGGAGCATATTaGGTCCAGATATTAAACAGC | + |
Preference number: 5 (lower is better) Translates to: EMHTSFFYFTHFSTYQQCSLGAY*VQILNS Trigger: GCTGTTTAATATCTGGACCAAATATGCTCCCAGGCT...ACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
||
CDS-3UTR CAA 90 bp | ATGCTAGGTGAACAGTCAAAAAGCCTGCTCCCTCTCCAGTTACCAATCAAATGTCCAAATTCTTTCCAGTaGTGTAGCACATCTGGTTTT | + |
Preference number: 5 (lower is better) Translates to: MLGEQSKSLLPLQLPIKCPNSFQ*CSTSGF Trigger: AAAACCAGATGTGCTACACAACTGGAAAGAATTTGG...ACATTTGATTGGTAACTGGAGAGGGAGCAGGCTTTTTGACTGTTCACCTAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | TGTCCCCTTGCTCTTCTAAGTTTATTTGTGACAGCCTTTGCACAGCAGTATTTAGGGGGCTCATTGTCTTaGTCTTTGTTGTTGGAAAAC | + |
Preference number: 5 (lower is better) Translates to: CPLALLSLFVTAFAQQYLGGSLS*SLLLEN Trigger: GTTTTCCAACAACAAAGACAAAGACAATGAGCCCCC...TAAATACTGCTGTGCAAAGGCTGTCACAAATAAACTTAGAAGAGCAAGGGGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS-3UTR CAA 90 bp | GAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTATTGACACCATCCAGTaGAAAAGGCTTCCTACTGAC | + |
Preference number: 5 (lower is better) Translates to: EMHTSFFYFTHFSTYQQCIDTIQ*KRLPTD Trigger: GTCAGTAGGAAGCCTTTTCAACTGGATGGTGTCAAT...ACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS TCA 90 bp | TTACGTTCGGCTTTGGGATGTGGGAGTGTAGTACGGAGCAGACTCTaGAAAAGCAATGCAGACAATATACAACAGTTGATTCTTTTCTTA | + |
Preference number: 5 (lower is better) Translates to: LRSALGCGSVVRSRL*KSNADNIQQLILFL Trigger: TAAGAAAAGAATCAACTGTTGTATATTGTCTGCATTGCTTTTTCAGAGTCTGCTCCGTACTACACTCCCACATCCCAAAGCCGAACGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 90 bp | TGCCTGCATGTTGTCTTTATGGGTGAGAGGTTTTCCAGAATCGAATaGTTGAGTTATCTTAACTTTCATTGTTGCTTTGTAGCCAGCAGG | + |
Preference number: 5 (lower is better) Translates to: CLHVVFMGERFSRIE*LSYLNFHCCFVASR Trigger: CCTGCTGGCTACAAAGCAACAATGAAAGTTAAGATAACTCAATCATTCGATTCTGGAAAACCTCTCACCCATAAAGACAACATGCAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
||
CDS TCA 90 bp | GAAATACACCAGGGCGATTTCGAGGTAGGAATCCCTTATCAACCCTaGGTTCTGATCGTTTTTCAGGCTTATTTGAATAGCTTCGAAAAA | + |
Preference number: 5 (lower is better) Translates to: EIHQGDFEVGIPYQP*VLIVFQAYLNSFEK Trigger: TTTTTCGAAGCTATTCAAATAAGCCTGAAAAACGATCAGAACTCAGGGTTGATAAGGGATTCCTACCTCGAAATCGCCCTGGTGTATTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 90 bp | TCTGACTATGTCTTGGCAAATGACAGACACAAAATATTGGTACAGTaGAAGAAGAGGCAGAACTATGAGGTTGTACTTAGCATAGTGCAG | + |
Preference number: 5 (lower is better) Translates to: SDYVLANDRHKILVQ*KKRQNYEVVLSIVQ Trigger: CTGCACTATGCTAAGTACAACCTCATAGTTCTGCCTCTTCTTGCACTGTACCAATATTTTGTGTCTGTCATTTGCCAAGACATAGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 90 bp | CTCTTTCATCTTGTGTCTGTGCAAGAAATAAAGAAAGCAGCTTTCTaGTGTGTCGGACTGATCTGTTATGATATTTGGACTTTTCCAGGG | + |
Preference number: 5 (lower is better) Translates to: LFHLVSVQEIKKAAF*CVGLICYDIWTFPG Trigger: CCCTGGAAAAGTCCAAATATCATAACAGATCAGTCCGACACAGCAGAAAGCTGCTTTCTTTATTTCTTGCACAGACACAAGATGAAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATCGTACTTCTGTTCCATaGAGGTGGCTAGAGCCTTCT | + |
Preference number: 5 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYRTSVP*RWLEPS Trigger: AGAAGGCTCTAGCCACCTCAATGGAACAGAAGTACG...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | TTTACACCATCAGTCTCTAGAGCAGAGTGTCACAGTGAGCTAGCTAAGGAAAGAATTTCTGACTATGTCTaGGCAAATGACAGACACAAA | + |
Preference number: 5 (lower is better) Translates to: FTPSVSRAECHSELAKERISDYV*ANDRHK Trigger: TTTGTGTCTGTCATTTGCCAAGACATAGTCAGAAAT...TCTTTCCTTAGCTAGCTCACTGTGACACTCTGCTCTAGAGACTGATGGTGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
||
CDS-3UTR CAA 90 bp | CATGGTCTTTGTCCCCTTGCTCTTCTAAGTTTATTTGTGACAGCCTTTGCACAGTTGTCTTTGTCTTTGTaGTTGGAAAACAGAGCTTCT | + |
Preference number: 5 (lower is better) Translates to: HGLCPLALLSLFVTAFAQLSLSL*LENRAS Trigger: AGAAGCTCTGTTTTCCAACAACAAAGACAAAGACAA...CTGTGCAAAGGCTGTCACAAATAAACTTAGAAGAGCAAGGGGACAAAGACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
||
CDS-3UTR CAA 90 bp | ACTCCATGCTCTCTTACTTCATCAGGCCTGAGATGCACACCTCATTTTTCTACTTCATTGTCTTTGTCTTaGTTGTTGGAAAACAGAGCT | + |
Preference number: 5 (lower is better) Translates to: TPCSLTSSGLRCTPHFSTSLSLS*LLENRA Trigger: AGCTCTGTTTTCCAACAACAAAGACAAAGACAATGA...AGTAGAAAAATGAGGTGTGCATCTCAGGCCTGATGAAGTAAGAGAGCATGGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATTCGCTTCTCCTGAGTTaGGGAGGTGGTTGTTGTTCA | + |
Preference number: 5 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYSLLLS*GGGCCS Trigger: TGAACAACAACCACCTCCCAAACTCAGGAGAAGCGA...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS GCA 90 bp | TTTGGGATGTGGGAGTGTAGTACGGAGCAGACTCTGAAAAAGCAATaGAGACAATATACAACAGTTGATTCTTTTCTTAACATTCGCAGT | + |
Preference number: 5 (lower is better) Translates to: FGMWECSTEQTLKKQ*RQYTTVDSFLNIRS Trigger: ACTGCGAATGTTAAGAAAAGAATCAACTGTTGTATATTGTCTGCATTGCTTTTTCAGAGTCTGCTCCGTACTACACTCCCACATCCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 90 bp | CTGCGTCTTTCTCAAACAGTAAAAGAGCCTTCTGCATCAGGTAGATaGCTTTGGACAGCTTGTTCTTCTTTATCTTCTTCATTACAGTTA | + |
Preference number: 5 (lower is better) Translates to: LRLSQTVKEPSASGR*LWTACSSLSSSLQL Trigger: TAACTGTAATGAAGAAGATAAAGAAGAACAAGCTGTCCAAAGCCATCTACCTGATGCAGAAGGCTCTTTTACTGTTTGAGAAAGACGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | TCCAACATAGACCCAGATCTACAAGATTCCAAAGCTAGTACAATAATTCTCTGCTCGAATACTCCTCTTTaGAAGATCATCACAGCCATC | + |
Preference number: 5 (lower is better) Translates to: SNIDPDLQDSKASTIILCSNTPL*KIITAI Trigger: GATGGCTGTGATGATCTTCAAAAGAGGAGTATTCGA...GCAGAGAATTATTGTACTAGCTTTGGAATCTTGTAGATCTGGGTCTATGTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGCTGTTTCTCTTCACATaGATCAATGGTTCGACTGCA | + |
Preference number: 5 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMLFLFT*INGSTA Trigger: TGCAGTCGAACCATTGATCAATGTGAAGAGAAACAG...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAAGGGGGCTCATTGTCTTaGTCTTTGTTGTTGGAAAAC | + |
Preference number: 5 (lower is better) Translates to: HTSFFYFTHFSTYQQCYEGGSLS*SLLLEN Trigger: GTTTTCCAACAACAAAGACAAAGACAATGAGCCCCC...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCACAGAGACAAGCTGTTaGGCTAGTCTCTGCTCTGAA | + |
Preference number: 5 (lower is better) Translates to: IRIEANSLKIWSKQVVKFTETSC*ASLCSE Trigger: TTCAGAGCAGAGACTAGCCAAACAGCTTGTCTCTGT...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCTCAAGTGCCTGCATGTaGTCTTTATGGGTGAGAGGT | + |
Preference number: 5 (lower is better) Translates to: IRIEANSLKIWSKQVVKFSSACM*SLWVRG Trigger: ACCTCTCACCCATAAAGACAACATGCAGGCACTTGA...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCTCGGGCACTTTCTTTTaGAACACCTTCGAATCCTGG | + |
Preference number: 5 (lower is better) Translates to: IRIEANSLKIWSKQVVKFSGTFF*NTFESW Trigger: CCAGGATTCGAAGGTGTTCAAAAAGAAAGTGCCCGA...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS TCA 90 bp | TATCGGTTTCCAAAGGAAAGATCAAACCTCTGTTTCTCTTCACATTaGTCAATGGTTCGACTGCAAGCAGAAGAATTAAATCCTTCTCTG | + |
Preference number: 5 (lower is better) Translates to: YRFPKERSNLCFSSH*SMVRLQAEELNPSL Trigger: CAGAGAAGGATTTAATTCTTCTGCTTGCAGTCGAACCATTGATCAATGTGAAGAGAAACAGAGGTTTGATCTTTCCTTTGGAAACCGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS TCA 90 bp | TGGACAGCTTGTTCTTCTTTATCTTCTTCATTACAGTTAACTCTGTaGAACACTCAGTGCTTCTGGGCTTCTTTACTTTTTCCCAACCTT | + |
Preference number: 5 (lower is better) Translates to: WTACSSLSSSLQLTL*NTQCFWASLLFPNL Trigger: AAGGTTGGGAAAAAGTAAAGAAGCCCAGAAGCACTGAGTGTTTCACAGAGTTAACTGTAATGAAGAAGATAAAGAAGAACAAGCTGTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 90 bp | CTTTCTCAAACAGTAAAAGAGCCTTCTGCATCAGGTAGATGGCTTTaGACAGCTTGTTCTTCTTTATCTTCTTCATTACAGTTAACTCTG | + |
Preference number: 5 (lower is better) Translates to: LSQTVKEPSASGRWL*TACSSLSSSLQLTL Trigger: CAGAGTTAACTGTAATGAAGAAGATAAAGAAGAACAAGCTGTCCAAAGCCATCTACCTGATGCAGAAGGCTCTTTTACTGTTTGAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | TCCAACATAGACCCAGATCTACAAGATTCCAAAGCTAGTACAATAATTCTCTGCCTTGTATTCTTTTATTaGACAGAGGCTGTCTCCAAC | + |
Preference number: 5 (lower is better) Translates to: SNIDPDLQDSKASTIILCLVFFY*TEAVSN Trigger: GTTGGAGACAGCCTCTGTCAAATAAAAGAATACAAG...GCAGAGAATTATTGTACTAGCTTTGGAATCTTGTAGATCTGGGTCTATGTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | GAGATGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTTGCCAGTAGAAACTTaGATATCTAAAATCCTCAGG | + |
Preference number: 5 (lower is better) Translates to: EMHTSFFYFTHFSTYQQCLPVET*ISKILR Trigger: CCTGAGGATTTTAGATATCAAAGTTTCTACTGGCAA...ACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCATCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCACTTTTTCCCAACCTTaGGCAGGAGTGTTTGTGCTA | + |
Preference number: 5 (lower is better) Translates to: IRIEANSLKIWSKQVVKFTFSQP*AGVFVL Trigger: TAGCACAAACACTCCTGCCAAAGGTTGGGAAAAAGT...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATTGTCTACAGTCAGCTTaGCTGTTGGTAACACTGTTC | + |
Preference number: 5 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYCLQSA*LLVTLF Trigger: GAACAGTGTTACCAACAGCAAAGCTGACTGTAGACA...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGGTATCTGTGGTTTGGTaGTGCTTCTTTTTCTTAGAG | + |
Preference number: 5 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMVSVVW*CFFFLE Trigger: CTCTAAGAAAAAGAAGCACAACCAAACCACAGATAC...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGGGTAGTACATTATTTTaGGTGAAGGATCGGGAATAC | + |
Preference number: 5 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMGSTLF*VKDREY Trigger: GTATTCCCGATCCTTCACCAAAAATAATGTACTACC...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS GCA 90 bp | GAATTGAAAAGTACAGATAAATCTTCTGTATCTGTGGTTTGGTTGTaGTTCTTTTTCTTAGAGACAGTGAGGGCATCCATCATTGCATTG | + |
Preference number: 5 (lower is better) Translates to: ELKSTDKSSVSVVWL*FFFLETVRASIIAL Trigger: CAATGCAATGATGGATGCCCTCACTGTCTCTAAGAAAAAGAAGCACAACCAAACCACAGATACAGAAGATTTATCTGTACTTTTCAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATAACTTTAAGGCTCCTTaGATTGCTGGTTTGGAGAAC | + |
Preference number: 5 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYNFKAP*IAGLEN Trigger: GTTCTCCAAACCAGCAATCAAAGGAGCCTTAAAGTT...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATGATATCATCAAGAGCTaGGCTCCAGCATTTAAAAGC | + |
Preference number: 5 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYDIIKS*APAFKS Trigger: GCTTTTAAATGCTGGAGCCAAGCTCTTGATGATATC...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCACCTGCTGTGGCTTCTaGGTTCTTGAAGTTTTCTTA | + |
Preference number: 5 (lower is better) Translates to: IRIEANSLKIWSKQVVKFTCCGF*VLEVFL Trigger: TAAGAAAACTTCAAGAACCAAGAAGCCACAGCAGGT...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | CACTTTAGTACATACCAGCAGTGTTATGAAATAGATACTCATATCCCACTCTATTCGCACATAAGTGAGTaGGAAGTCTGGAAAACAACT | + |
Preference number: 5 (lower is better) Translates to: HFSTYQQCYEIDTHIPLYSHISE*EVWKTT Trigger: AGTTGTTTTCCAGACTTCCAACTCACTTATGTGCGA...ATAGAGTGGGATATGAGTATCTATTTCATAACACTGCTGGTATGTACTAAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAAAAAATCAATTCAGAGTaGTACAGGGACGTGAGAAGT | + |
Preference number: 5 (lower is better) Translates to: HTSFFYFTHFSTYQQCYEKINSE*YRDVRS Trigger: ACTTCTCACGTCCCTGTACAACTCTGAATTGATTTT...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | TGCACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAATGTTTTCCAAACCTaGAAGAAGTTCCCTTGGAAA | + |
Preference number: 5 (lower is better) Translates to: CTPHFSTSLTLVHTSSVMNVFQT*KKFPWK Trigger: TTTCCAAGGGAACTTCTTCAAGGTTTGGAAAACATT...CATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS GCA 90 bp | AAATGTTTTCCAAACCTTGAAGAAGTTCCCTTGGAAATCCATCAATaGATGAAGAAGAGTAGAGCTGTAAGAATCGTTTCAGGAAAAGAT | + |
Preference number: 5 (lower is better) Translates to: KCFPNLEEVPLEIHQ*MKKSRAVRIVSGKD Trigger: ATCTTTTCCTGAAACGATTCTTACAGCTCTACTCTTCTTCATGCATTGATGGATTTCCAAGGGAACTTCTTCAAGGTTTGGAAAACATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS-3UTR CAA 90 bp | GTCTCAGATGATGCTACTTTCAAAGAAGTAAACCTCCTTTGTCTTGCTTTTATTCCAAATTCTTTCCAGTaGTGTAGCACATCTGGTTTT | + |
Preference number: 5 (lower is better) Translates to: VSDDATFKEVNLLCLAFIPNSFQ*CSTSGF Trigger: AAAACCAGATGTGCTACACAACTGGAAAGAATTTGG...AATAAAAGCAAGACAAAGGAGGTTTACTTCTTTGAAAGTAGCATCATCTGAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067705.8 |
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CDS-3UTR CAA 90 bp | CACACCTCATTTTTCTACTTCACTCACTTTAGTACATACCAGCAGTGTTATGAATTGTCTTTGTCTTTGTaGTTGGAAAACAGAGCTTCT | + |
Preference number: 5 (lower is better) Translates to: HTSFFYFTHFSTYQQCYELSLSL*LENRAS Trigger: AGAAGCTCTGTTTTCCAACAACAAAGACAAAGACAA...TTCATAACACTGCTGGTATGTACTAAAGTGAGTGAAGTAGAAAAATGAGGTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCTGCTCTTCTTTATTTTaGAGCTCCCCAAGAACTTCT | + |
Preference number: 5 (lower is better) Translates to: IRIEANSLKIWSKQVVKFCSSLF*SSPRTS Trigger: AGAAGTTCTTGGGGAGCTCAAAAATAAAGAAGAGCA...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS-3UTR CAA 90 bp | ATAAGAATTGAAGCTAATTCTTTAAAGATATGGAGCAAGCAGGTGGTGAAGTTCTTCTGTATCTGTGGTTaGGTTGTGCTTCTTTTTCTT | + |
Preference number: 5 (lower is better) Translates to: IRIEANSLKIWSKQVVKFFCICG*VVLLFL Trigger: AAGAAAAAGAAGCACAACCAAACCACAGATACAGAA...GAACTTCACCACCTGCTTGCTCCATATCTTTAAAGAATTAGCTTCAATTCTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168110.8 |
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CDS CCA 72 bp | CAGCTCCCGGATCTCCTTCTCGCAAGAGGCCAGGAGTaGGTTTTTACTGTCCAGGGGCCCGTAGAAGGCGGC | + |
Preference number: 6 (lower is better) Translates to: QLPDLLLARGQE*VFTVQGPVEGG Trigger: GCCGCCTTCTACGGGCCCCTGGACAGTAAAAACCCACTCCTGGCCTCTTGCGAGAAGGAGATCCGGGAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS CCA 72 bp | GGGCAGATGCACCGGCGACACCGATGTCTCAGAGTCTaGGGACTCCTCAGAAGAACTGGAGGAGCTTCTGGA | + |
Preference number: 6 (lower is better) Translates to: GQMHRRHRCLRV*GLLRRTGGASG Trigger: TCCAGAAGCTCCTCCAGTTCTTCTGAGGAGTCCCCAGACTCTGAGACATCGGTGTCGCCGGTGCATCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS CCA 72 bp | TGGACAGGAGCGGGACAGAGGACTCCATGCACATGCTaGCCCACAGCAGGAACTCCAAGGCCTTGGAAGACT | + |
Preference number: 6 (lower is better) Translates to: WTGAGQRTPCTC*PTAGTPRPWKT Trigger: AGTCTTCCAAGGCCTTGGAGTTCCTGCTGTGGGCCAGCATGTGCATGGAGTCCTCTGTCCCGCTCCTGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS TCA 72 bp | CGGCAGTGTAGAGAGTGGCTCTCCATGTCAGGTACCTaGTGGACAGGAGCGGGACAGAGGACTCCATGCACA | + |
Preference number: 6 (lower is better) Translates to: RQCREWLSMSGT*WTGAGQRTPCT Trigger: TGTGCATGGAGTCCTCTGTCCCGCTCCTGTCCATCAGGTACCTGACATGGAGAGCCACTCTCTACACTGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS CAA 90 bp | ACGGGAGAGCTCAGGGCCATTCAGCTCTTTTATCCTCTGGACCAGTaGGCGCTGAGCATACACCAACAGCGGGGTCACTTGCTCTGTGTA | + |
Preference number: 6 (lower is better) Translates to: TGELRAIQLFYPLDQ*ALSIHQQRGHLLCV Trigger: TACACAGAGCAAGTGACCCCGCTGTTGGTGTATGCTCAGCGCCAACTGGTCCAGAGGATAAAAGAGCTGAATGGCCCTGAGCTCTCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | AGGGTACCGTTGAAGATAATCCAGCAGAGGTGCTCCTaGGGGAGAGCCACCTGCATGATGAGCCGAAAGGAG | + |
Preference number: 6 (lower is better) Translates to: RVPLKIIQQRCS*GRATCMMSRKE Trigger: CTCCTTTCGGCTCATCATGCAGGTGGCTCTCCCTCAGGAGCACCTCTGCTGGATTATCTTCAACGGTACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS GCA 72 bp | GCCACCTGCATGATGAGCCGAAAGGAGGACAAGATGTaGAGGCACTGTCTCACGGATTCCTCATTCTGCAGG | + |
Preference number: 6 (lower is better) Translates to: ATCMMSRKEDKM*RHCLTDSSFCR Trigger: CCTGCAGAATGAGGAATCCGTGAGACAGTGCCTGCACATCTTGTCCTCCTTTCGGCTCATCATGCAGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS GCA 72 bp | GAACTCGGCCAGGACCTCTGTGTCGTCGGCACTCTTTaGCTCTGTGCATACTTCATCGATGAGGCTCAGACA | + |
Preference number: 6 (lower is better) Translates to: ELGQDLCVVGTL*LCAYFIDEAQT Trigger: TGTCTGAGCCTCATCGATGAAGTATGCACAGAGGCAAAGAGTGCCGACGACACAGAGGTCCTGGCCGAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | CTCAGGGCCATTCAGCTCTTTTATCCTCTGGACCAGTaGGCGCTGAGCATACACCAACAGCGGGGTCACTTG | + |
Preference number: 6 (lower is better) Translates to: LRAIQLFYPLDQ*ALSIHQQRGHL Trigger: CAAGTGACCCCGCTGTTGGTGTATGCTCAGCGCCAACTGGTCCAGAGGATAAAAGAGCTGAATGGCCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 72 bp | GCAGGCACTGTCTCACGGATTCCTCATTCTGCAGGTTaGCATCGCTTTCGCAGACCAGCTGGTAGTTGCAAA | + |
Preference number: 6 (lower is better) Translates to: AGTVSRIPHSAG*HRFRRPAGSCK Trigger: TTTGCAACTACCAGCTGGTCTGCGAAAGCGATGCCAACCTGCAGAATGAGGAATCCGTGAGACAGTGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS TCA 72 bp | TTCTCTCCATTTTCAGCCTCGTATCTGGCGCAAGCCTaGCGGGAGAGCTCAGGGCCATTCAGCTCTTTTATC | + |
Preference number: 6 (lower is better) Translates to: FSPFSASYLAQA*RESSGPFSSFI Trigger: GATAAAAGAGCTGAATGGCCCTGAGCTCTCCCGTCAGGCTTGCGCCAGATACGAGGCTGAAAATGGAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 72 bp | GTATCTGCAGCTCCCGGGAAAAGTTCCAGAAGACCCTaGAACAATTCTGCAGTAGAGTCCAGTAGCCACCAC | + |
Preference number: 6 (lower is better) Translates to: VSAAPGKSSRRP*NNSAVESSSHH Trigger: GTGGTGGCTACTGGACTCTACTGCAGAATTGTTGCAGGGTCTTCTGGAACTTTTCCCGGGAGCTGCAGATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 72 bp | CTCGAGGCTGAATATAGCAGGCAGGGAGACATCAAATaGAACCTTGGTCATTGGAGGAGGGGGCTCATTGTC | + |
Preference number: 6 (lower is better) Translates to: LEAEYSRQGDIK*NLGHWRRGLIV Trigger: GACAATGAGCCCCCTCCTCCAATGACCAAGGTTCCATTTGATGTCTCCCTGCCTGCTATATTCAGCCTCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | TGCAGAACGGGCAGCCACTTACTGATGTCCTTCTTCTaGCTGCTGGAACATACCTGCTTGGCCATGGTGTGT | + |
Preference number: 6 (lower is better) Translates to: CRTGSHLLMSFF*LLEHTCLAMVC Trigger: ACACACCATGGCCAAGCAGGTATGTTCCAGCAGCAAGAAGAAGGACATCAGTAAGTGGCTGCCCGTTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | TCAGGTTATCACTCAGGCTCCGGTATGCCATTTTCCTaGCGTCCGTTCTCTTGTTTCTGTCCAGCTCTGCCA | + |
Preference number: 6 (lower is better) Translates to: SGYHSGSGMPFS*RPFSCFCPALP Trigger: TGGCAGAGCTGGACAGAAACAAGAGAACGGACGTCAGGAAAATGGCATACCGGAGCCTGAGTGATAACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | CCAGCATCAAGCGGCACCTCAGCCAAAGGTGAATATTaGAGTATTCCCGGGAGTTCAGGGAAATGGGGTCTA | + |
Preference number: 6 (lower is better) Translates to: PASSGTSAKGEY*SIPGSSGKWGL Trigger: TAGACCCCATTTCCCTGAACTCCCGGGAATACTTCAATATTCACCTTTGGCTGAGGTGCCGCTTGATGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 72 bp | CCTTTGGCAGGAGTGTTTGTGCTAACAGTTGGAGCCTaGAAAACTTCCAGTTGGTCAAGGAGCACAACGGCT | + |
Preference number: 6 (lower is better) Translates to: PLAGVFVLTVGA*KTSSWSRSTTA Trigger: AGCCGTTGTGCTCCTTGACCAACTGGAAGTTTTGCAGGCTCCAACTGTTAGCACAAACACTCCTGCCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 72 bp | TCCAGGGGCACAGAGACAAGCTGTTTGGCTAGTCTCTaGTCTGAAGTGATGAGTGTCTTCAGGGGTTCAGAA | + |
Preference number: 6 (lower is better) Translates to: SRGTETSCLASL*SEVMSVFRGSE Trigger: TTCTGAACCCCTGAAGACACTCATCACTTCAGAGCAGAGACTAGCCAAACAGCTTGTCTCTGTGCCCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | GTTTGTGCTAACAGTTGGAGCCTGCAAAACTTCCAGTaGGTCAAGGAGCACAACGGCTATACGGTGCTGAGC | + |
Preference number: 6 (lower is better) Translates to: VCANSWSLQNFQ*VKEHNGYTVLS Trigger: GCTCAGCACCGTATAGCCGTTGTGCTCCTTGACCAACTGGAAGTTTTGCAGGCTCCAACTGTTAGCACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 72 bp | TTCCCAACCTTTGGCAGGAGTGTTTGTGCTAACAGTTaGAGCCTGCAAAACTTCCAGTTGGTCAAGGAGCAC | + |
Preference number: 6 (lower is better) Translates to: FPTFGRSVCANS*SLQNFQLVKEH Trigger: GTGCTCCTTGACCAACTGGAAGTTTTGCAGGCTCCAACTGTTAGCACAAACACTCCTGCCAAAGGTTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | CTGGGAATGCTGAACTCGCCTCTCTCCTCGAAGGGCTaGATAGAGTTTGTGCTCTGCAGCTTTATCAACATG | + |
Preference number: 6 (lower is better) Translates to: LGMLNSPLSSKG*IEFVLCSFINM Trigger: CATGTTGATAAAGCTGCAGAGCACAAACTCTATCAAGCCCTTCGAGGAGAGAGGCGAGTTCAGCATTCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | AGCTCAGCCAGGTTCTTGGGTGTGGAAGAATCAATCTaGAGGCGCTTCCCAATGAAGTTTCGACAGGTGATC | + |
Preference number: 6 (lower is better) Translates to: SSARFLGVEESI*RRFPMKFRQVI Trigger: GATCACCTGTCGAAACTTCATTGGGAAGCGCCTCAAGATTGATTCTTCCACACCCAAGAACCTGGCTGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | TTGTCGATCATGGCCCTCTTCTTTCCTATCAGGAGGTaGATCCCCAGTACAGATTCACTGACCTGTGCAGCA | + |
Preference number: 6 (lower is better) Translates to: LSIMALFFPIRR*IPSTDSLTCAA Trigger: TGCTGCACAGGTCAGTGAATCTGTACTGGGGATCAACCTCCTGATAGGAAAGAAGAGGGCCATGATCGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 90 bp | AGTGTCTTCAGGGGTTCAGAACTGCCTTGTAGCTCAGCCAGGTTCTaGGGTGTGGAAGAATCAATCTTGAGGCGCTTCCCAATGAAGTTT | + |
Preference number: 6 (lower is better) Translates to: SVFRGSELPCSSARF*GVEESILRRFPMKF Trigger: AAACTTCATTGGGAAGCGCCTCAAGATTGATTCTTCCACACCCAAGAACCTGGCTGAGCTACAAGGCAGTTCTGAACCCCTGAAGACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 90 bp | CATCTCAAAGTGTCATTCACATCCAGGGGCACAGAGACAAGCTGTTaGGCTAGTCTCTGCTCTGAAGTGATGAGTGTCTTCAGGGGTTCA | + |
Preference number: 6 (lower is better) Translates to: HLKVSFTSRGTETSC*ASLCSEVMSVFRGS Trigger: TGAACCCCTGAAGACACTCATCACTTCAGAGCAGAGACTAGCCAAACAGCTTGTCTCTGTGCCCCTGGATGTGAATGACACTTTGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | ACAGCAGGAACTCCAAGGCCTTGGAAGACTGTCCTATaGCCATCAGCTTCCGGCAAATGGTGTAGATGTAAA | + |
Preference number: 6 (lower is better) Translates to: TAGTPRPWKTVL*PSASGKWCRCK Trigger: TTTACATCTACACCATTTGCCGGAAGCTGATGGTCATAGGACAGTCTTCCAAGGCCTTGGAGTTCCTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS TCA 72 bp | AGTTTGGTAGTAGGAAGAAATGACCAGCCCCAGCTGTaGGGAGGGAAGTTTGCTTTTCTCCACGGAGCTAAA | + |
Preference number: 6 (lower is better) Translates to: SLVVGRNDQPQL*GGKFAFLHGAK Trigger: TTTAGCTCCGTGGAGAAAAGCAAACTTCCCTCCTCACAGCTGGGGCTGGTCATTTCTTCCTACTACCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000212902.2 |
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CDS TCA 72 bp | TTCTGTGGTAGAAGTTTCTGGAGAGGTGGGGCTGCATaGCTCTTCGGGCACTTTCTTTTTGAACACCTTCGA | + |
Preference number: 6 (lower is better) Translates to: FCGRSFWRGGAA*LFGHFLFEHLR Trigger: TCGAAGGTGTTCAAAAAGAAAGTGCCCGAAGAGTCATGCAGCCCCACCTCTCCAGAAACTTCTACCACAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | GAAGTTACCAGCATCAAGCGGCACCTCAGCCAAAGGTaGATATTGAAGTATTCCCGGGAGTTCAGGGAAATG | + |
Preference number: 6 (lower is better) Translates to: EVTSIKRHLSQR*ILKYSREFREM Trigger: CATTTCCCTGAACTCCCGGGAATACTTCAATATTCACCTTTGGCTGAGGTGCCGCTTGATGCTGGTAACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | AGCTTTTGTATGATGTCTGCCTTAAAGTGCTTCTCCTaGAGGCCCAGGACCACAGCTTGCATTAGGAACTCG | + |
Preference number: 6 (lower is better) Translates to: SFCMMSALKCFS*RPRTTACIRNS Trigger: CGAGTTCCTAATGCAAGCTGTGGTCCTGGGCCTTCAGGAGAAGCACTTTAAGGCAGACATCATACAAAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | GCTGTGCCTTCTGGGAAGAGGCTTGAGTGTTGTGGCTaGAGCCTTCCTCTTTGGCTTCTTCAGATAGAAATA | + |
Preference number: 6 (lower is better) Translates to: AVPSGKRLECCG*SLPLWLLQIEI Trigger: TATTTCTATCTGAAGAAGCCAAAGAGGAAGGCTTCAGCCACAACACTCAAGCCTCTTCCCAGAAGGCACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | TTGCCAGATAAGTCAGACTGCAGGGAGCTGTCCCGATaGACCTTGCCTGATGATTCGAACAGAACTTTCTCT | + |
Preference number: 6 (lower is better) Translates to: LPDKSDCRELSR*TLPDDSNRTFS Trigger: AGAGAAAGTTCTGTTCGAATCATCAGGCAAGGTTCATCGGGACAGCTCCCTGCAGTCTGACTTATCTGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 72 bp | GTCCAGATATTAAACAGCGTGGTGGCACACCTCCGATaGAATTCGTACTTCTGTTCCATTGAGGTGGCTAGA | + |
Preference number: 6 (lower is better) Translates to: VQILNSVVAHLR*NSYFCSIEVAR Trigger: TCTAGCCACCTCAATGGAACAGAAGTACGAATTCCATCGGAGGTGTGCCACCACGCTGTTTAATATCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS CCA 72 bp | TGTCTCCAACCTTCAGGAGCTTCTCGTTGTAATAGTTaGACGGCAGCCTGGGAGCATATTTGGTCCAGATAT | + |
Preference number: 6 (lower is better) Translates to: CLQPSGASRCNS*TAAWEHIWSRY Trigger: ATATCTGGACCAAATATGCTCCCAGGCTGCCGTCCAACTATTACAACGAGAAGCTCCTGAAGGTTGGAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS CCA 72 bp | CCTTCTTCTTGCTGCTGGAACATACCTGCTTGGCCATaGTGTGTCCAATCCTCAGTTTTACTTTGGCCAGTA | + |
Preference number: 6 (lower is better) Translates to: PSSCCWNIPAWP*CVQSSVLLWPV Trigger: TACTGGCCAAAGTAAAACTGAGGATTGGACACACCATGGCCAAGCAGGTATGTTCCAGCAGCAAGAAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | CTGAATATAGCAGGCAGGGAGACATCAAATGGAACCTaGGTCATTGGAGGAGGGGGCTCATTGTCTTTGTCT | + |
Preference number: 6 (lower is better) Translates to: LNIAGRETSNGT*VIGGGGSLSLS Trigger: AGACAAAGACAATGAGCCCCCTCCTCCAATGACCAAGGTTCCATTTGATGTCTCCCTGCCTGCTATATTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 90 bp | TTATTGACTTTGTCGATCATGGCCCTCTTCTTTCCTATCAGGAGGTaGATCCCCAGTACAGATTCACTGACCTGTGCAGCAGCTCGTATT | + |
Preference number: 6 (lower is better) Translates to: LLTLSIMALFFPIRR*IPSTDSLTCAAARI Trigger: AATACGAGCTGCTGCACAGGTCAGTGAATCTGTACTGGGGATCAACCTCCTGATAGGAAAGAAGAGGGCCATGATCGACAAAGTCAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | ATTGCGATCCAGGCCAGTGAGCTATACATCTCAGTTTaGGTTGCTACTGGGTCTTTAACAGAGCTGTGCCTT | + |
Preference number: 6 (lower is better) Translates to: IAIQASELYISV*VATGSLTELCL Trigger: AAGGCACAGCTCTGTTAAAGACCCAGTAGCAACTCAAACTGAGATGTATAGCTCACTGGCCTGGATCGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 72 bp | ACCCTGGGTAGGGACACAGACACAGAAATGAAGAATTaGTGCCAAGCTAAAAGTGTCTTCCGTGAATGTGGT | + |
Preference number: 6 (lower is better) Translates to: TLGRDTDTEMKN*CQAKSVFRECG Trigger: ACCACATTCACGGAAGACACTTTTAGCTTGGCAGCAATTCTTCATTTCTGTGTCTGTGTCCCTACCCAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS GCA 72 bp | TTGGCTCCAGCATTTAAAAGCAGCCCTTTTCTTATCTaGAAAGAGGAGGAGGCTTCCAAGAGAATGCAGGGA | + |
Preference number: 6 (lower is better) Translates to: LAPAFKSSPFLI*KEEEASKRMQG Trigger: TCCCTGCATTCTCTTGGAAGCCTCCTCCTCTTTGCAGATAAGAAAAGGGCTGCTTTTAAATGCTGGAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 72 bp | TTCGTACTGAGCATAGTTACGTTCGGCTTTGGGATGTaGGAGTGTAGTACGGAGCAGACTCTGAAAAAGCAA | + |
Preference number: 6 (lower is better) Translates to: FVLSIVTFGFGM*ECSTEQTLKKQ Trigger: TTGCTTTTTCAGAGTCTGCTCCGTACTACACTCCCACATCCCAAAGCCGAACGTAACTATGCTCAGTACGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | CTCAGTGGAATCCAGGAGGTGCCAACGTACAGGCTGTaGCCAGTAGAAACTTTGATATCTAAAATCCTCAGG | + |
Preference number: 6 (lower is better) Translates to: LSGIQEVPTYRL*PVETLISKILR Trigger: CCTGAGGATTTTAGATATCAAAGTTTCTACTGGCAACAGCCTGTACGTTGGCACCTCCTGGATTCCACTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163209.3 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | CTGATGTCCTTCTTCTTGCTGCTGGAACATACCTGCTaGGCCATGGTGTGTCCAATCCTCAGTTTTACTTTG | + |
Preference number: 6 (lower is better) Translates to: LMSFFLLLEHTC*AMVCPILSFTL Trigger: CAAAGTAAAACTGAGGATTGGACACACCATGGCCAAGCAGGTATGTTCCAGCAGCAAGAAGAAGGACATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 90 bp | ATACCGCCCATAGCACTGCAGAAGAGCCAGCTTGTATTCTTTTATTaGACAGAGGCTGTCTCCAACCTTCAGGAGCTTCTCGTTGTAATA | + |
Preference number: 6 (lower is better) Translates to: IPPIALQKSQLVFFY*TEAVSNLQELLVVI Trigger: TATTACAACGAGAAGCTCCTGAAGGTTGGAGACAGCCTCTGTCAAATAAAAGAATACAAGCTGGCTCTTCTGCAGTGCTATGGGCGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 90 bp | GTTGCCTTGGTCATTGGAGGAGGGGGCTCATTGTCTTTGTCTTTGTaGTTGGAAAACAGAGCTTCTATTTCAGAGCAACATTCGAGGATC | + |
Preference number: 6 (lower is better) Translates to: VALVIGGGGSLSLSL*LENRASISEQHSRI Trigger: GATCCTCGAATGTTGCTCTGAAATAGAAGCTCTGTTTTCCAACAACAAAGACAAAGACAATGAGCCCCCTCCTCCAATGACCAAGGCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS CAA 90 bp | GTTGTTGCCTTGGTCATTGGAGGAGGGGGCTCATTGTCTTTGTCTTaGTTGTTGGAAAACAGAGCTTCTATTTCAGAGCAACATTCGAGG | + |
Preference number: 6 (lower is better) Translates to: VVALVIGGGGSLSLS*LLENRASISEQHSR Trigger: CCTCGAATGTTGCTCTGAAATAGAAGCTCTGTTTTCCAACAACAAAGACAAAGACAATGAGCCCCCTCCTCCAATGACCAAGGCAACAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163209.3 |
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CDS CAA 90 bp | GGAACCTTGGTCATTGGAGGAGGGGGCTCATTGTCTTTGTCTTTGTaGTTGGAAAACAGAGCTTCTATTTCAGAGCAACATTCGAGGATC | + |
Preference number: 6 (lower is better) Translates to: GTLVIGGGGSLSLSL*LENRASISEQHSRI Trigger: GATCCTCGAATGTTGCTCTGAAATAGAAGCTCTGTTTTCCAACAACAAAGACAAAGACAATGAGCCCCCTCCTCCAATGACCAAGGTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | ATCTCGGCTATTTGTGCAAGATTAGATAGTTTCTGGTaGACTGCAATGACGCTCCTCAGTGGAATCCAGGAG | + |
Preference number: 6 (lower is better) Translates to: ISAICARLDSFW*TAMTLLSGIQE Trigger: CTCCTGGATTCCACTGAGGAGCGTCATTGCAGTTCACCAGAAACTATCTAATCTTGCACAAATAGCCGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163209.3 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 72 bp | ATAAACTGCGCTATCTTCGCTGTGATCATCGCCGCTTaGAAACACCCCCAGATGCCAAATTTCGATAGAAAT | + |
Preference number: 6 (lower is better) Translates to: INCAIFAVIIAA*KHPQMPNFDRN Trigger: ATTTCTATCGAAATTTGGCATCTGGGGGTGTTTGCAAGCGGCGATGATCACAGCGAAGATAGCGCAGTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 72 bp | CCTCTCTCCTCGAAGGGCTTGATAGAGTTTGTGCTCTaGAGCTTTATCAACATGTCAATAAGTAGTTCTGCG | + |
Preference number: 6 (lower is better) Translates to: PLSSKGLIEFVL*SFINMSISSSA Trigger: CGCAGAACTACTTATTGACATGTTGATAAAGCTGCAGAGCACAAACTCTATCAAGCCCTTCGAGGAGAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 72 bp | AATCTCAGCCTCCACTTCATATTCCTCTGCTGCGGTTaGTTTACAGACCTTCAAAGCCATGTCAAACATGTG | + |
Preference number: 6 (lower is better) Translates to: NLSLHFIFLCCG*FTDLQSHVKHV Trigger: CACATGTTTGACATGGCTTTGAAGGTCTGTAAAGCAACCGCAGCAGAGGAATATGAAGTGGAGGCTGAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 72 bp | ATGGCAAGAGACACCAGAGTTTCCCACTTCTCCACTTaGTATAGAACCTCCAGAGACTTCAACACAAAGTCA | + |
Preference number: 6 (lower is better) Translates to: MARDTRVSHFST*YRTSRDFNTKS Trigger: TGACTTTGTGTTGAAGTCTCTGGAGGTTCTATACCAAGTGGAGAAGTGGGAAACTCTGGTGTCTCTTGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 72 bp | TCTTCGGGCACTTTCTTTTTGAACACCTTCGAATCCTaGAGAAGCTTCAGTGTAGAGTATAGGATGGCAGTG | + |
Preference number: 6 (lower is better) Translates to: SSGTFFLNTFES*RSFSVEYRMAV Trigger: CACTGCCATCCTATACTCTACACTGAAGCTTCTCCAGGATTCGAAGGTGTTCAAAAAGAAAGTGCCCGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | ATAGCACTGCAGAAGAGCCAGCTTGTATTCTTTTATTaGACAGAGGCTGTCTCCAACCTTCAGGAGCTTCTC | + |
Preference number: 6 (lower is better) Translates to: IALQKSQLVFFY*TEAVSNLQELL Trigger: GAGAAGCTCCTGAAGGTTGGAGACAGCCTCTGTCAAATAAAAGAATACAAGCTGGCTCTTCTGCAGTGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | GAATCTCAGCCTCCACTTCATATTCCTCTGCTGCGGTaGCTTTACAGACCTTCAAAGCCATGTCAAACATGT | + |
Preference number: 6 (lower is better) Translates to: ESQPPLHIPLLR*LYRPSKPCQTC Trigger: ACATGTTTGACATGGCTTTGAAGGTCTGTAAAGCAACCGCAGCAGAGGAATATGAAGTGGAGGCTGAGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | AGGCAAAACTCCACCTTCCCTGGAGTAAATTTTGAGTaGTCCATCCCTCCTCTTTCATCTTGTGTCTGTGCA | + |
Preference number: 6 (lower is better) Translates to: RQNSTFPGVNFE*SIPPLSSCVCA Trigger: TGCACAGACACAAGATGAAAGAGGAGGGATGGACAACTCAAAATTTACTCCAGGGAAGGTGGAGTTTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212902.2 |
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CDS CAA 90 bp | GGAATCCAGGAGGTGCCAACGTACAGGCTGTTGCCAGTAGAAACTTaGATATCTAAAATCCTCAGGGGCTTCAGGTTATATGCATACAAT | + |
Preference number: 6 (lower is better) Translates to: GIQEVPTYRLLPVET*ISKILRGFRLYAYN Trigger: ATTGTATGCATATAACCTGAAGCCCCTGAGGATTTTAGATATCAAAGTTTCTACTGGCAACAGCCTGTACGTTGGCACCTCCTGGATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000163209.3 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 90 bp | AGAGACTTCAACACAAAGTCATGGATCCATCTCAAATCTACCACGTaGACGTCATCCAAAGGATGTTCAAAGATCAGGCTGGAACCTCCA | + |
Preference number: 6 (lower is better) Translates to: RDFNTKSWIHLKSTT*TSSKGCSKIRLEPP Trigger: TGGAGGTTCCAGCCTGATCTTTGAACATCCTTTGGATGACGTCAACGTGGTAGATTTGAGATGGATCCATGACTTTGTGTTGAAGTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 90 bp | AATGGAACCTTGGTCATTGGAGGAGGGGGCTCATTGTCTTTGTCTTaGTTGTTGGAAAACAGAGCTTCTATTTCAGAGCAACATTCGAGG | + |
Preference number: 6 (lower is better) Translates to: NGTLVIGGGGSLSLS*LLENRASISEQHSR Trigger: CCTCGAATGTTGCTCTGAAATAGAAGCTCTGTTTTCCAACAACAAAGACAAAGACAATGAGCCCCCTCCTCCAATGACCAAGGTTCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 90 bp | AGGGAGACATCAAATGGAACCTTGGTCATTGGAGGAGGGGGCTCATaGTCTTTGTCTTTGTTGTTGGAAAACAGAGCTTCTATTTCAGAG | + |
Preference number: 6 (lower is better) Translates to: RETSNGTLVIGGGGS*SLSLLLENRASISE Trigger: CTCTGAAATAGAAGCTCTGTTTTCCAACAACAAAGACAAAGACAATGAGCCCCCTCCTCCAATGACCAAGGTTCCATTTGATGTCTCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | TTCCCAAAGACTCTAGTATTTCACTTAATCGTAACGTaGTCTCCGCCACCATCACAATGTCCAGGTCTTCCA | + |
Preference number: 6 (lower is better) Translates to: FPKTLVFHLIVT*SPPPSQCPGLP Trigger: TGGAAGACCTGGACATTGTGATGGTGGCGGAGATCACGTTACGATTAAGTGAAATACTAGAGTCTTTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000170065.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | ACACAAAGTCATGGATCCATCTCAAATCTACCACGTTaGCGTCATCCAAAGGATGTTCAAAGATCAGGCTGG | + |
Preference number: 6 (lower is better) Translates to: TQSHGSISNLPR*RHPKDVQRSGW Trigger: CCAGCCTGATCTTTGAACATCCTTTGGATGACGTCAACGTGGTAGATTTGAGATGGATCCATGACTTTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | CAGGGCGATTTCGAGGTAGGAATCCCTTATCAACCCTaGGTTCTGATCGTTTTTCAGGCTTATTTGAATAGC | + |
Preference number: 6 (lower is better) Translates to: QGDFEVGIPYQP*VLIVFQAYLNS Trigger: GCTATTCAAATAAGCCTGAAAAACGATCAGAACTCAGGGTTGATAAGGGATTCCTACCTCGAAATCGCCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | TTTGGCGCAAAATCAATTCAGAGTTGTACAGGGACGTaGGAAGTGTGTCATCAGGCAAAGAAATCCCTGAGA | + |
Preference number: 6 (lower is better) Translates to: FGAKSIQSCTGT*EVCHQAKKSLR Trigger: TCTCAGGGATTTCTTTGCCTGATGACACACTTCTCACGTCCCTGTACAACTCTGAATTGATTTTGCGCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 72 bp | CTTCTTTTTCTTAGAGACAGTGAGGGCATCCATCATTaGATTGTAGCTGTCTACAGTCAGCTTTGCTGTTGG | + |
Preference number: 6 (lower is better) Translates to: LLFLRDSEGIHH*IVAVYSQLCCW Trigger: CCAACAGCAAAGCTGACTGTAGACAGCTACAATGCAATGATGGATGCCCTCACTGTCTCTAAGAAAAAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | CATCCATCATTGCATTGTAGCTGTCTACAGTCAGCTTaGCTGTTGGTAACACTGTTCCAGAGTGGAACAATG | + |
Preference number: 6 (lower is better) Translates to: HPSLHCSCLQSA*LLVTLFQSGTM Trigger: CATTGTTCCACTCTGGAACAGTGTTACCAACAGCAAAGCTGACTGTAGACAGCTACAATGCAATGATGGATG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | ATGCAGAGAAAGTTATCCTGGCTAACAGGAAAGGTTTaGCAACTAGCCACAGTCTGCTTCAGTAGTATCTGC | + |
Preference number: 6 (lower is better) Translates to: MQRKLSWLTGKV*QLATVCFSSIC Trigger: GCAGATACTACTGAAGCAGACTGTGGCTAGTTGCAAAACCTTTCCTGTTAGCCAGGATAACTTTCTCTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 90 bp | AAGAGAATGCAGGGACTGAACTTTAAGGCTCCTTTGATTGCTGGTTaGGAGAACATCAATAGTTTGGTAGTAGGAAGAAATGACCAGCCC | + |
Preference number: 6 (lower is better) Translates to: KRMQGLNFKAPLIAG*ENINSLVVGRNDQP Trigger: GGGCTGGTCATTTCTTCCTACTACCAAACTATTGATGTTCTCCAAACCAGCAATCAAAGGAGCCTTAAAGTTCAGTCCCTGCATTCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000212902.2 |
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CDS TCA 72 bp | GCTTTGGGATGTGGGAGTGTAGTACGGAGCAGACTCTaGAAAAGCAATGCAGACAATATACAACAGTTGATT | + |
Preference number: 6 (lower is better) Translates to: ALGCGSVVRSRL*KSNADNIQQLI Trigger: AATCAACTGTTGTATATTGTCTGCATTGCTTTTTCAGAGTCTGCTCCGTACTACACTCCCACATCCCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | ATCTGTTATGATATTTGGACTTTTCCAGGGTCTCTCTaGAGCATCTCAAAGTGTCATTCACATCCAGGGGCA | + |
Preference number: 6 (lower is better) Translates to: ICYDIWTFPGSL*SISKCHSHPGA Trigger: TGCCCCTGGATGTGAATGACACTTTGAGATGCTTCAGAGAGACCCTGGAAAAGTCCAAATATCATAACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 72 bp | CAAACTGATAATTTCCTTAAGCTTTTGTATGATGTCTaGCTTAAAGTGCTTCTCCTGAAGGCCCAGGACCAC | + |
Preference number: 6 (lower is better) Translates to: QTDNFLKLLYDV*LKVLLLKAQDH Trigger: GTGGTCCTGGGCCTTCAGGAGAAGCACTTTAAGGCAGACATCATACAAAAGCTTAAGGAAATTATCAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | AACACAAAGTCATGGATCCATCTCAAATCTACCACGTaGACGTCATCCAAAGGATGTTCAAAGATCAGGCTG | + |
Preference number: 6 (lower is better) Translates to: NTKSWIHLKSTT*TSSKGCSKIRL Trigger: CAGCCTGATCTTTGAACATCCTTTGGATGACGTCAACGTGGTAGATTTGAGATGGATCCATGACTTTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | AACTCTGGGATGTTTGGCAATGTAATGTTATTGACTTaGTCGATCATGGCCCTCTTCTTTCCTATCAGGAGG | + |
Preference number: 6 (lower is better) Translates to: NSGMFGNVMLLT*SIMALFFPIRR Trigger: CCTCCTGATAGGAAAGAAGAGGGCCATGATCGACAAAGTCAATAACATTACATTGCCAAACATCCCAGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | GAGTTAATAGCAACTGAGAGGGTAAGTGCTTTAATATaGGAAGGATTTCTGGGACCCCTTTTGAAGTCCCAG | + |
Preference number: 6 (lower is better) Translates to: ELIATERVSALI*EGFLGPLLKSQ Trigger: CTGGGACTTCAAAAGGGGTCCCAGAAATCCTTCCAATATTAAAGCACTTACCCTCTCAGTTGCTATTAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220280.2 |
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CDS GCA 72 bp | GTCTTGGCAAATGACAGACACAAAATATTGGTACAGTaGAAGAAGAGGCAGAACTATGAGGTTGTACTTAGC | + |
Preference number: 6 (lower is better) Translates to: VLANDRHKILVQ*KKRQNYEVVLS Trigger: GCTAAGTACAACCTCATAGTTCTGCCTCTTCTTGCACTGTACCAATATTTTGTGTCTGTCATTTGCCAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | AGATGCATTTCTTTTTGGCGCAAAATCAATTCAGAGTaGTACAGGGACGTGAGAAGTGTGTCATCAGGCAAA | + |
Preference number: 6 (lower is better) Translates to: RCISFWRKINSE*YRDVRSVSSGK Trigger: TTTGCCTGATGACACACTTCTCACGTCCCTGTACAACTCTGAATTGATTTTGCGCCAAAAAGAAATGCATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | CCAAAAGAGATGGCAGTGAGGAGAGTTAATAGCAACTaGGAGGGTAAGTGCTTTAATATTGGAAGGATTTCT | + |
Preference number: 6 (lower is better) Translates to: PKEMAVRRVNSN*EGKCFNIGRIS Trigger: AGAAATCCTTCCAATATTAAAGCACTTACCCTCTCAGTTGCTATTAACTCTCCTCACTGCCATCTCTTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220280.2 |
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CDS TCA 72 bp | TATAAGATTCTTCAGAGATTCCAAAAGAGATGGCAGTaGGGAGAGTTAATAGCAACTGAGAGGGTAAGTGCT | + |
Preference number: 6 (lower is better) Translates to: YKILQRFQKRWQ*GELIATERVSA Trigger: AGCACTTACCCTCTCAGTTGCTATTAACTCTCCTCACTGCCATCTCTTTTGGAATCTCTGAAGAATCTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220280.2 |
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CDS GCA 72 bp | TTTCCTGACGTCCGTTCTCTTGTTTCTGTCCAGCTCTaGCATATCAAAAATGGATGGATTCTTGTAGAAAAA | + |
Preference number: 6 (lower is better) Translates to: FPDVRSLVSVQL*HIKNGWILVEK Trigger: TTTTTCTACAAGAATCCATCCATTTTTGATATGGCAGAGCTGGACAGAAACAAGAGAACGGACGTCAGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 72 bp | AGTACAGATAAATCTTCTGTATCTGTGGTTTGGTTGTaGTTCTTTTTCTTAGAGACAGTGAGGGCATCCATC | + |
Preference number: 6 (lower is better) Translates to: STDKSSVSVVWL*FFFLETVRASI Trigger: GATGGATGCCCTCACTGTCTCTAAGAAAAAGAAGCACAACCAAACCACAGATACAGAAGATTTATCTGTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CCA 72 bp | TCTCAAACAGTAAAAGAGCCTTCTGCATCAGGTAGATaGCTTTGGACAGCTTGTTCTTCTTTATCTTCTTCA | + |
Preference number: 6 (lower is better) Translates to: SQTVKEPSASGR*LWTACSSLSSS Trigger: TGAAGAAGATAAAGAAGAACAAGCTGTCCAAAGCCATCTACCTGATGCAGAAGGCTCTTTTACTGTTTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | GAATCAATTCAAGATGTAGGTCCATTGTGTAGCTGTTaGATGCAATCGGTTTGTAAGTGTCTCCATCTACGT | + |
Preference number: 6 (lower is better) Translates to: ESIQDVGPLCSC*MQSVCKCLHLR Trigger: ACGTAGATGGAGACACTTACAAACCGATTGCATCAAACAGCTACACAATGGACCTACATCTTGAATTGATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000170065.8 ENSMUST00000212902.2 ENSMUST00000220280.2 |
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CDS CAA 72 bp | CAGGGACTGAACTTTAAGGCTCCTTTGATTGCTGGTTaGGAGAACATCAATAGTTTGGTAGTAGGAAGAAAT | + |
Preference number: 6 (lower is better) Translates to: QGLNFKAPLIAG*ENINSLVVGRN Trigger: ATTTCTTCCTACTACCAAACTATTGATGTTCTCCAAACCAGCAATCAAAGGAGCCTTAAAGTTCAGTCCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000212902.2 |
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CDS CAA 90 bp | AGAGTTTTCTTTTTCTTCCTTCGTCTTCTTGTTAAGTCTGAACTCTaGCCAATCTCGATCACTATGGCTTTAAACTTACTGGGAGACTTG | + |
Preference number: 6 (lower is better) Translates to: RVFFFFLRLLVKSEL*PISITMALNLLGDL Trigger: CAAGTCTCCCAGTAAGTTTAAAGCCATAGTGATCGAGATTGGCAAGAGTTCAGACTTAACAAGAAGACGAAGGAAGAAAAAGAAAACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS GCA 72 bp | TGGGAGTGTAGTACGGAGCAGACTCTGAAAAAGCAATaGAGACAATATACAACAGTTGATTCTTTTCTTAAC | + |
Preference number: 6 (lower is better) Translates to: WECSTEQTLKKQ*RQYTTVDSFLN Trigger: GTTAAGAAAAGAATCAACTGTTGTATATTGTCTGCATTGCTTTTTCAGAGTCTGCTCCGTACTACACTCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067705.8 ENSMUST00000164979.2 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | AAAAGTACAGATAAATCTTCTGTATCTGTGGTTTGGTaGTGCTTCTTTTTCTTAGAGACAGTGAGGGCATCC | + |
Preference number: 6 (lower is better) Translates to: KSTDKSSVSVVW*CFFFLETVRAS Trigger: GGATGCCCTCACTGTCTCTAAGAAAAAGAAGCACAACCAAACCACAGATACAGAAGATTTATCTGTACTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | CTAGTGAAATGTTTTCCAAACCTTGAAGAAGTTCCCTaGGAAATCCATCAATGCATGAAGAAGAGTAGAGCT | + |
Preference number: 6 (lower is better) Translates to: LVKCFPNLEEVP*EIHQCMKKSRA Trigger: AGCTCTACTCTTCTTCATGCATTGATGGATTTCCAAGGGAACTTCTTCAAGGTTTGGAAAACATTTCACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 90 bp | TTATCGGTTTCCAAAGGAAAGATCAAACCTCTGTTTCTCTTCACATaGATCAATGGTTCGACTGCAAGCAGAAGAATTAAATCCTTCTCT | + |
Preference number: 6 (lower is better) Translates to: LSVSKGKIKPLFLFT*INGSTASRRIKSFS Trigger: AGAGAAGGATTTAATTCTTCTGCTTGCAGTCGAACCATTGATCAATGTGAAGAGAAACAGAGGTTTGATCTTTCCTTTGGAAACCGATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS CAA 90 bp | TTGGAATTGAAAAGTACAGATAAATCTTCTGTATCTGTGGTTTGGTaGTGCTTCTTTTTCTTAGAGACAGTGAGGGCATCCATCATTGCA | + |
Preference number: 6 (lower is better) Translates to: LELKSTDKSSVSVVW*CFFFLETVRASIIA Trigger: TGCAATGATGGATGCCCTCACTGTCTCTAAGAAAAAGAAGCACAACCAAACCACAGATACAGAAGATTTATCTGTACTTTTCAATTCCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | CCAAAGGAAAGATCAAACCTCTGTTTCTCTTCACATTaGTCAATGGTTCGACTGCAAGCAGAAGAATTAAAT | + |
Preference number: 6 (lower is better) Translates to: PKERSNLCFSSH*SMVRLQAEELN Trigger: ATTTAATTCTTCTGCTTGCAGTCGAACCATTGATCAATGTGAAGAGAAACAGAGGTTTGATCTTTCCTTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS GCA 72 bp | AACCCATTTGTTAGTGCTGATCTTGTGAGAATATTTTaGGAAGTCGTTTTTGGGTATGTTGAGCCTTTGAAT | + |
Preference number: 6 (lower is better) Translates to: NPFVSADLVRIF*EVVFGYVEPLN Trigger: ATTCAAAGGCTCAACATACCCAAAAACGACTTCGCAAAATATTCTCACAAGATCAGCACTAACAAATGGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS CAA 72 bp | TCCAAAGGAAAGATCAAACCTCTGTTTCTCTTCACATaGATCAATGGTTCGACTGCAAGCAGAAGAATTAAA | + |
Preference number: 6 (lower is better) Translates to: SKGKIKPLFLFT*INGSTASRRIK Trigger: TTTAATTCTTCTGCTTGCAGTCGAACCATTGATCAATGTGAAGAGAAACAGAGGTTTGATCTTTCCTTTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020200.14 ENSMUST00000168110.8 ENSMUST00000168617.3 ENSMUST00000212902.2 |
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CDS TCA 72 bp | AACAGAACTTTCTCTAGTGAAATGTTTTCCAAACCTTaGAGAAGTTCCCTTGGAAATCCATCAATGCATGAA | + |
Preference number: 6 (lower is better) Translates to: NRTFSSEMFSKP*RSSLGNPSMHE Trigger: TTCATGCATTGATGGATTTCCAAGGGAACTTCTTCAAGGTTTGGAAAACATTTCACTAGAGAAAGTTCTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |
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CDS TCA 72 bp | GTTGTCTTTATGGGTGAGAGGTTTTCCAGAATCGAATaGTTGAGTTATCTTAACTTTCATTGTTGCTTTGTA | + |
Preference number: 6 (lower is better) Translates to: VVFMGERFSRIE*LSYLNFHCCFV Trigger: TACAAAGCAACAATGAAAGTTAAGATAACTCAATCATTCGATTCTGGAAAACCTCTCACCCATAAAGACAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168110.8 ENSMUST00000212902.2 |