Pregenerated sensors for CFAP52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020904Ensembl transcript IDs: ENSMUST00000021287.12, ENSMUST00000126766.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | ATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTaGACAGGCCTGTGCTCGACACAGGGTGGAAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: IKPGSGVMQTWP*TGLCSTQGGSC Trigger: GCAGCTTCCACCCTGTGTCGAGCACAGGCCTGTCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| 3UTR GCA 72 bp | AATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATaGAAACTTGGCCCTGGACAGGCCTGTGCTCGACAC | + |
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Preference number: 3 (lower is better) Translates to: NRCEKSNPVLEL*KLGPGQACARH Trigger: GTGTCGAGCACAGGCCTGTCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| 3UTR GCA 72 bp | GAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTaGATCAAATTTCTACCTTCTAACGGTCCTCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: ESNYIEQNSFAC*IKFLPSNGPLL Trigger: AAGAAGAGGACCGTTAGAAGGTAGAAATTTGATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
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| 3UTR GCA 72 bp | CTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTaGTGCATCAAATTTCTACCTTCTAACGGTCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: LESNYIEQNSFA*CIKFLPSNGPL Trigger: AAGAGGACCGTTAGAAGGTAGAAATTTGATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
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| 3UTR CAA 72 bp | GTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTaGGCCCTGGACAGGCCTGTGCTCGACACAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VRNQTRFWSYAN*ALDRPVLDTGW Trigger: CCACCCTGTGTCGAGCACAGGCCTGTCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | ATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGACGCACGAGGTCCCAAATaGTGCATGTCCCATCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: IGVRNQTRFWSYANLALDARGPK*CMSHRC Trigger: GCACCGATGGGACATGCATCATTTGGGACCTCGTGC...GTCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCATGCCCCACCCCGACGTaGGTCACTTCACCCTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: DYRAKIGVRNQTRFWSYACPTPT*VTSPSL Trigger: CAACGAGGGTGAAGTGACTCACGTCGGGGTGGGGCA...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCACCATCTTCAGGCACCTaGGAGCCGACACTCCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: DYRAKIGVRNQTRFWSYAPSSGT*EPTLPS Trigger: GCTTGGGAGTGTCGGCTCTCAGGTGCCTGAAGATGG...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | ATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGACGTACATCAGCCGACCTaGTTCTGGAGCAAAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: IGVRNQTRFWSYANLALDVHQPT*FWSKGS Trigger: AGAGCCTTTGCTCCAGAATCAGGTCGGCTGATGTAC...GTCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | AATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGACATCGGTGCTGGCAGTaGCACACTCCTCGTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: NRCEKSNPVLELCKLGPGHRCWQ*HTPRCS Trigger: AGAACAACGAGGAGTGTGTCACTGCCAGCACCGATG...TCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | AAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGCCGACACTCCCAAGCTaGATTTGTCCTTCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: KIGVRNQTRFWSYANLALPTLPS*ICPSQA Trigger: GGCCTGTGAAGGACAAATTCAGCTTGGGAGTGTCGG...CAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | GCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCTGGTGTGCCACACCCTaGTGTCTTTCTTGGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: AKIGVRNQTRFWSYANLAWCATP*CLSWHR Trigger: CCTGTGCCAAGAAAGACATCAGGGTGTGGCACACCA...GGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCATCATGTTGGGCACCGTaGTCCGAAGCAGCTCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: DYRAKIGVRNQTRFWSYASCWAP*SEAAPV Trigger: AACGGGAGCTGCTTCGGATCACGGTGCCCAACATGA...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | ATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGACTTGGCCAGGATCATCTaGTTCCTTCTAAGTCGCACG | + |
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Preference number: 4 (lower is better) Translates to: IGVRNQTRFWSYANLALDLARII*FLLSRT Trigger: CGTGCGACTTAGAAGGAATCAGATGATCCTGGCCAA...GTCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | GGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCTCCCATTCCCAGCAGTaGCAAACATCTCATCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: GKNRCEKSNPVLELCKLGSHSQQ*QTSHLG Trigger: GCCGAGATGAGATGTTTGTCACTGCTGGGAATGGGA...GCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | ATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGACAAGTGCCCTCCTTCCTaGGTGATATCCATACCATTG | + |
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Preference number: 4 (lower is better) Translates to: IGVRNQTRFWSYANLALDKCPPS*VISIPL Trigger: CAATGGTATGGATATCACTCAGGAAGGAGGGCACTT...GTCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | GGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCTGTAGTCCCAGACTTTaGCCAGATGGTCATGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GKNRCEKSNPVLELCKLGCSPRL*PDGHGH Trigger: GTGGCCATGACCATCTGGTCAAAGTCTGGGACTACA...GCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | GCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCGGTCAGGATGGCATTTaGGACCATTGGGAACATGTC | + |
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Preference number: 4 (lower is better) Translates to: AKIGVRNQTRFWSYANLAGQDGI*DHWEHV Trigger: GACATGTTCCCAATGGTCTCAAATGCCATCCTGACC...GGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | AAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGTATTTATTGCCTGGATaGGGACAGTGCAACCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KIGVRNQTRFWSYANLALYLLPG*GQCNPG Trigger: CCCTGGGTTGCACTGTCCTCATCCAGGCAATAAATA...CAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCATCGATTTTGCCCTTGTaGAGTGACAGCCGAGCGATC | + |
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Preference number: 4 (lower is better) Translates to: DYRAKIGVRNQTRFWSYASILPL*SDSRAI Trigger: GATCGCTCGGCTGTCACTTCACAAGGGCAAAATCGA...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCCCATCTTCAGGCACCTaGGAGCCGACACTCCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LRNLESNYIEQNSFACCIPSSGT*EPTLPS Trigger: GCTTGGGAGTGTCGGCTCTCAGGTGCCTGAAGATGG...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
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| CDS-3UTR TCA 90 bp | GGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCTCTTCCCATCTCTCATaGAGTCAATGCCATGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GKNRCEKSNPVLELCKLGSSHLS*SQCHGR Trigger: CCTGCCATGGCATTGACTTCATGAGAGATGGGAAGA...GCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | GGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCTCCATCATCCCATGCTaGGATGATGCTCTTCCCATC | + |
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Preference number: 4 (lower is better) Translates to: GKNRCEKSNPVLELCKLGSIIPC*DDALPI Trigger: GATGGGAAGAGCATCATCTCAGCATGGGATGATGGA...GCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR GCA 90 bp | GGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCTATCCCCGGTTGTGGTaGCAAGGTAGAAGAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GKNRCEKSNPVLELCKLGYPRLW*QGRRSC Trigger: ACAGCTTCTTCTACCTTGGCACCACAACCGGGGATA...GCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | GCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCGAATATCCCCGGTTGTaGTGCCAAGGTAGAAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: AKIGVRNQTRFWSYANLAEYPRL*CQGRRS Trigger: GCTTCTTCTACCTTGGCACCACAACCGGGGATATTC...GGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | GGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCTGGAGCAAAGGCTCTaGTTTTTCCATCATCCCATG | + |
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Preference number: 4 (lower is better) Translates to: GKNRCEKSNPVLELCKLGLEQRL*FFHHPM Trigger: CATGGGATGATGGAAAAATCAGAGCCTTTGCTCCAG...GCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR GCA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCACCAAGGCTTCGATTTTaGCCTTGTGAAGTGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: DYRAKIGVRNQTRFWSYAPRLRF*PCEVTA Trigger: GGCTGTCACTTCACAAGGGCAAAATCGAAGCCTTGG...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR GCA 90 bp | GCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCATCTCTCTTGGCTATaGTCCAAACCACCACACTTC | + |
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Preference number: 4 (lower is better) Translates to: AKIGVRNQTRFWSYANLAHLSWL*SKPPHF Trigger: GAAGTGTGGTGGTTTGGAGCATAGCCAAGAGAGATG...GGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR GCA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCACGTTTGGACATGGTGTaGCACACCCTGATGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: DYRAKIGVRNQTRFWSYARLDMV*HTLMSF Trigger: GAAAGACATCAGGGTGTGGCACACCATGTCCAAACG...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCATGCTCCTGGTCAGGATaGCATTTGAGACCATTGGGA | + |
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Preference number: 4 (lower is better) Translates to: DYRAKIGVRNQTRFWSYACSWSG*HLRPLG Trigger: TCCCAATGGTCTCAAATGCCATCCTGACCAGGAGCA...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | ATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGACTTAGTATTTATTGCCTaGATGAGGACAGTGCAACCC | + |
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Preference number: 4 (lower is better) Translates to: IGVRNQTRFWSYANLALDLVFIA*MRTVQP Trigger: GGGTTGCACTGTCCTCATCCAGGCAATAAATACTAA...GTCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | ATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGACTATAATCTCCTTCCTTaGAGATGGTCACACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: IGVRNQTRFWSYANLALDYNLLP*RWSHRR Trigger: TCTCCTGTGTGACCATCTCCAAGGAAGGAGATTATA...GTCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | ATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGACTGTTTGGCACTCGGTTaGCCAGATTTTTCTATTTGG | + |
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Preference number: 4 (lower is better) Translates to: IGVRNQTRFWSYANLALDCLALG*PDFSIW Trigger: CCAAATAGAAAAATCTGGCCAACCGAGTGCCAAACA...GTCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | AAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGTTCATCTGTCCTGTTTaGCACTCGGTTGGCCAGATT | + |
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Preference number: 4 (lower is better) Translates to: KIGVRNQTRFWSYANLALFICPV*HSVGQI Trigger: AATCTGGCCAACCGAGTGCCAAACAGGACAGATGAA...CAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | GGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCACTGGAATAGGGTGTTaGCCAGGATCATCTGATTCC | + |
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Preference number: 4 (lower is better) Translates to: GKNRCEKSNPVLELCKLGTGIGC*PGSSDS Trigger: GGAATCAGATGATCCTGGCCAACACCCTATTCCAGT...GCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | GCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCTTGACCAGATGGTCATaGCCACCTGTAACAAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: AKIGVRNQTRFWSYANLALTRWS*PPVTKC Trigger: GCACTTTGTTACAGGTGGCCATGACCATCTGGTCAA...GGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | GCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCAGACTTTGACCAGATaGTCATGGCCACCTGTAACA | + |
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Preference number: 4 (lower is better) Translates to: AKIGVRNQTRFWSYANLAQTLTR*SWPPVT Trigger: TGTTACAGGTGGCCATGACCATCTGGTCAAAGTCTG...GGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCCCGACACTCCCAAGCTaGATTTGTCCTTCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LRNLESNYIEQNSFACCIPTLPS*ICPSQA Trigger: GGCCTGTGAAGGACAAATTCAGCTTGGGAGTGTCGG...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
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| CDS-3UTR TCA 90 bp | GGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCTGGACAGCTTCAAAGTaGCAAGTTGCAATGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: GKNRCEKSNPVLELCKLGWTASK*QVAMRV Trigger: GACTCTCATTGCAACTTGTCACTTTGAAGCTGTCCA...GCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | ATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGACAGCCTTCCAACTCTCTaGTTACTGATCCATCAAATA | + |
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Preference number: 4 (lower is better) Translates to: IGVRNQTRFWSYANLALDSLPTL*LLIHQI Trigger: TATTTGATGGATCAGTAATCAGAGAGTTGGAAGGCT...GTCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | ATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGACCCAGATTTTTCTATTTaGAAGATCCAGTTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: IGVRNQTRFWSYANLALDPDFSI*KIQFPH Trigger: GTGTGGGAACTGGATCTTCCAAATAGAAAAATCTGG...GTCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | GCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTCAGCAGTACCAAATaGAAAGACAATGTCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: AKIGVRNQTRFWSYANLALSSTK*KDNVLD Trigger: GTCCAGGACATTGTCTTTCCATTTGGTACTGCTGAG...GGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | GGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCACACTGACGATATACTaGTTTCCTGGACTTATCCGC | + |
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Preference number: 4 (lower is better) Translates to: GKNRCEKSNPVLELCKLGTLTIY*FPGLIR Trigger: GCGGATAAGTCCAGGAAACCAGTATATCGTCAGTGT...GCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR TCA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCTCCCATTCCCAGCAGTaGCAAACATCTCATCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: LLRNLESNYIEQNSFACCSHSQQ*QTSHLG Trigger: GCCGAGATGAGATGTTTGTCACTGCTGGGAATGGGA...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
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| CDS-3UTR CCA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAGAGACGTTGTTACCATaGCCATGTAGGAAATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: DYRAKIGVRNQTRFWSYAETLLP*PCRKFC Trigger: GCAGAATTTCCTACATGGCCATGGTAACAACGTCTC...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CCA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCACCAAGTACAAATCATTaGGCGAAAAGGCCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DYRAKIGVRNQTRFWSYAPSTNH*AKRPRL Trigger: AAGCCTTGGCCTTTTCGCCCAATGATTTGTACTTGG...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR TCA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCGGTCAGGATGGCATTTaGGACCATTGGGAACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRNLESNYIEQNSFACCGQDGI*DHWEHV Trigger: GACATGTTCCCAATGGTCTCAAATGCCATCCTGACC...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR TCA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCTATTTATTGCCTGGATaGGGACAGTGCAACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRNLESNYIEQNSFACCYLLPG*GQCNPG Trigger: CCCTGGGTTGCACTGTCCTCATCCAGGCAATAAATA...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTCATTAGTATTTATTaGCTGGATGAGGACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKIGVRNQTRFWSYANLALISIY*LDEDSA Trigger: TGCACTGTCCTCATCCAGGCAATAAATACTAATGAG...GGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR GCA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCCCAAGGCTTCGATTTTaGCCTTGTGAAGTGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLESNYIEQNSFACCIPRLRF*PCEVTA Trigger: GGCTGTCACTTCACAAGGGCAAAATCGAAGCCTTGG...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR GCA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCTATCCCCGGTTGTGGTaGCAAGGTAGAAGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRNLESNYIEQNSFACCYPRLW*QGRRSC Trigger: ACAGCTTCTTCTACCTTGGCACCACAACCGGGGATA...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCTGCTCCTGGTCAGGATaGCATTTGAGACCATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRNLESNYIEQNSFACCICSWSG*HLRPLG Trigger: TCCCAATGGTCTCAAATGCCATCCTGACCAGGAGCA...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCGAATATCCCCGGTTGTaGTGCCAAGGTAGAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLESNYIEQNSFACCIEYPRL*CQGRRS Trigger: GCTTCTTCTACCTTGGCACCACAACCGGGGATATTC...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CCA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCTTCATCTGTCCTGTTTaGCACTCGGTTGGCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LLRNLESNYIEQNSFACCFICPV*HSVGQI Trigger: AATCTGGCCAACCGAGTGCCAAACAGGACAGATGAA...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR TCA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCTGGACAGCTTCAAAGTaGCAAGTTGCAATGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRNLESNYIEQNSFACCWTASK*QVAMRV Trigger: GACTCTCATTGCAACTTGTCACTTTGAAGCTGTCCA...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCCCAAGTACAAATCATTaGGCGAAAAGGCCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLESNYIEQNSFACCIPSTNH*AKRPRL Trigger: AAGCCTTGGCCTTTTCGCCCAATGATTTGTACTTGG...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCTTAGTATTTATTGCCTaGATGAGGACAGTGCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLESNYIEQNSFACCILVFIA*MRTVQP Trigger: GGGTTGCACTGTCCTCATCCAGGCAATAAATACTAA...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCTATAATCTCCTTCCTTaGAGATGGTCACACAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRNLESNYIEQNSFACCIYNLLP*RWSHRR Trigger: TCTCCTGTGTGACCATCTCCAAGGAAGGAGATTATA...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CCA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCTGTTTGGCACTCGGTTaGCCAGATTTTTCTATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRNLESNYIEQNSFACCCLALG*PDFSIW Trigger: CCAAATAGAAAAATCTGGCCAACCGAGTGCCAAACA...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR GCA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCCTCATTAGTATTTATTaGCTGGATGAGGACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRNLESNYIEQNSFACCLISIY*LDEDSA Trigger: TGCACTGTCCTCATCCAGGCAATAAATACTAATGAG...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CCA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCCCAGATTTTTCTATTTaGAAGATCCAGTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLRNLESNYIEQNSFACCPDFSI*KIQFPH Trigger: GTGTGGGAACTGGATCTTCCAAATAGAAAAATCTGG...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS CCA 90 bp | CAAGATGGCTCCATCTGCGCTCACACTGACGATATACTGGTTTCCTaGACTTATCCGCATGGCCATGATGTTGCCGCTGTGCCCCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: QDGSICAHTDDILVS*TYPHGHDVAAVPHP Trigger: GGGGTGGGGCACAGCGGCAACATCATGGCCATGCGGATAAGTCCAGGAAACCAGTATATCGTCAGTGTGAGCGCAGATGGAGCCATCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | GCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCGTGGCATTGCCGACATaGAGGCCCGCCGCGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AKIGVRNQTRFWSYANLAVALPT*RPAAGL Trigger: CAGCCCCGCGGCGGGCCTCAATGTCGGCAATGCCAC...GGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS GCA 90 bp | ATGTTGGGCACCGTGATCCGAAGCAGCTCCCGTTTGGACATGGTGTaGCACACCCTGATGTCTTTCTTGGCACAGGTAGCAAACAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MLGTVIRSSSRLDMV*HTLMSFLAQVANSS Trigger: TGAGCTGTTTGCTACCTGTGCCAAGAAAGACATCAGGGTGTGGCACACCATGTCCAAACGGGAGCTGCTTCGGATCACGGTGCCCAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS CCA 90 bp | CATGCTGAGATGATGCTCTTCCCATCTCTCATGAAGTCAATGCCATaGCAGGTCATGTTGGGCACCGTGATCCGAAGCAGCTCCCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HAEMMLFPSLMKSMP*QVMLGTVIRSSSRL Trigger: CAAACGGGAGCTGCTTCGGATCACGGTGCCCAACATGACCTGCCATGGCATTGACTTCATGAGAGATGGGAAGAGCATCATCTCAGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS CCA 90 bp | TTCCACCTCAAGATGGCTCCATCTGCGCTCACACTGACGATATACTaGTTTCCTGGACTTATCCGCATGGCCATGATGTTGCCGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FHLKMAPSALTLTIY*FPGLIRMAMMLPLC Trigger: GCACAGCGGCAACATCATGGCCATGCGGATAAGTCCAGGAAACCAGTATATCGTCAGTGTGAGCGCAGATGGAGCCATCTTGAGGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | GCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCACCACGCTGGTGGCATaGCCGACATTGAGGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AKIGVRNQTRFWSYANLATTLVA*PTLRPA Trigger: GGCGGGCCTCAATGTCGGCAATGCCACCAGCGTGGT...GGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS TCA 90 bp | CTTTTACAGTCACTGGTGGTAGCAATGGCCGTCACTCCGATCCTGTaGGCACTGTTAATGGTGTACATCAGCCGACCTGATTCTGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLQSLVVAMAVTPIL*ALLMVYISRPDSGA Trigger: TGCTCCAGAATCAGGTCGGCTGATGTACACCATTAACAGTGCTCACAGGATCGGAGTGACGGCCATTGCTACCACCAGTGACTGTAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS TCA 90 bp | TTGACCAGATGGTCATGGCCACCTGTAACAAAGTGCCCTCCTTCCTaGGTGATATCCATACCATTGATGGACCCAGACAAGGAGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTRWSWPPVTKCPPS*VISIPLMDPDKEPS Trigger: GGAAGGCTCCTTGTCTGGGTCCATCAATGGTATGGATATCACTCAGGAAGGAGGGCACTTTGTTACAGGTGGCCATGACCATCTGGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCGTGGCATTGCCGACATaGAGGCCCGCCGCGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRNLESNYIEQNSFACCIVALPT*RPAAGL Trigger: CAGCCCCGCGGCGGGCCTCAATGTCGGCAATGCCAC...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CAA 90 bp | AAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGCCATGGCAGGTCATGTaGGGCACCGTGATCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KIGVRNQTRFWSYANLALPWQVM*GTVIRS Trigger: GCTTCGGATCACGGTGCCCAACATGACCTGCCATGG...CAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS TCA 90 bp | ATCATTGGGCGAAAAGGCCAAGGCTTCGATTTTGCCCTTGTGAAGTaGCAGCCGAGCGATCAGCTCCCTCTTCTTAAAGTCCCACAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IIGRKGQGFDFALVK*QPSDQLPLLKVPQN Trigger: ATTCTGTGGGACTTTAAGAAGAGGGAGCTGATCGCTCGGCTGTCACTTCACAAGGGCAAAATCGAAGCCTTGGCCTTTTCGCCCAATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
||
| CDS-3UTR CAA 90 bp | AAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGCAGGACACGGAAGACTaGTGCTCCTTCAGAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KIGVRNQTRFWSYANLALQDTED*CSFRAS Trigger: GGAGGCTCTGAAGGAGCACAAGTCTTCCGTGTCCTG...CAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCACCACGCTGGTGGCATaGCCGACATTGAGGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRNLESNYIEQNSFACCITTLVA*PTLRPA Trigger: GGCGGGCCTCAATGTCGGCAATGCCACCAGCGTGGT...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS TCA 90 bp | CATTTGAGACCATTGGGAACATGTCCATTGAAGCCGATCACAGCCTaGAGCTCCAGTTCTGCTACATCCAGCTCGGGTAAAACTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLRPLGTCPLKPITA*SSSSATSSSGKTCS Trigger: AGAACAAGTTTTACCCGAGCTGGATGTAGCAGAACTGGAGCTTCAGGCTGTGATCGGCTTCAATGGACATGTTCCCAATGGTCTCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
||
| CDS-3UTR CAA 90 bp | AATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGACAAATGGCATCTCTCTaGGCTATGCTCCAAACCACC | + |
|
Preference number: 5 (lower is better) Translates to: NRCEKSNPVLELCKLGPGQMASL*AMLQTT Trigger: GGTGGTTTGGAGCATAGCCAAGAGAGATGCCATTTG...TCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | AATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGAGTGACACACTCCTCGTaGTTCTTCTTCACCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: NRCEKSNPVLELCKLGPGVTHSS*FFFTLM Trigger: CATCAGGGTGAAGAAGAACAACGAGGAGTGTGTCAC...TCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS TCA 90 bp | ACCATTGATGGACCCAGACAAGGAGCCTTCCAACTCTCTGATTACTaGTCCATCAAATACTTCCCAGTAAGCAATCTTCCTGTCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TIDGPRQGAFQLSDY*SIKYFPVSNLPVCA Trigger: GGCACAGACAGGAAGATTGCTTACTGGGAAGTATTTGATGGATCAGTAATCAGAGAGTTGGAAGGCTCCTTGTCTGGGTCCATCAATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS CCA 90 bp | TTTCATCTGTCCTGTTTGGCACTCGGTTGGCCAGATTTTTCTATTTaGAAGATCCAGTTCCCACACTCGAATTGTCCCATTCCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FHLSCLALGWPDFSI*KIQFPHSNCPIPSS Trigger: ACTGCTGGGAATGGGACAATTCGAGTGTGGGAACTGGATCTTCCAAATAGAAAAATCTGGCCAACCGAGTGCCAAACAGGACAGATGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
||
| CDS-3UTR CAA 90 bp | AAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGTTTCATCTGTCCTGTTaGGCACTCGGTTGGCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KIGVRNQTRFWSYANLALFHLSC*ALGWPD Trigger: ATCTGGCCAACCGAGTGCCAAACAGGACAGATGAAA...CAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | AATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGAGTCTTGGGGTTCATTTaGAGAATATCCCCGGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NRCEKSNPVLELCKLGPGVLGFI*RISPVV Trigger: CACAACCGGGGATATTCTCAAAATGAACCCCAAGAC...TCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | AATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCCTGGAGTATCTGCCAGCAGTTaGGTCTTGGGGTTCATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NRCEKSNPVLELCKLGPGVSASS*VLGFIL Trigger: CAAAATGAACCCCAAGACCAAACTGCTGGCAGATAC...TCCAGGGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | GCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCTGGTCAGGATGGCATTaGAGACCATTGGGAACATGT | + |
|
Preference number: 5 (lower is better) Translates to: AKIGVRNQTRFWSYANLAWSGWH*RPLGTC Trigger: ACATGTTCCCAATGGTCTCAAATGCCATCCTGACCA...GGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS CCA 90 bp | TCGGCCATTCCAGTACTCAAGACTATTCTTTTCATCTGTCCTGTTTaGCACTCGGTTGGCCAGATTTTTCTATTTGGAAGATCCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAIPVLKTILFICPV*HSVGQIFLFGRSSS Trigger: GGAACTGGATCTTCCAAATAGAAAAATCTGGCCAACCGAGTGCCAAACAGGACAGATGAAAAGAATAGTCTTGAGTACTGGAATGGCCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCAGAATGATGTCTGCCTaGAAACCCATGAAGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: AKIGVRNQTRFWSYANLARMMSA*KPMKVT Trigger: AGTCACCTTCATGGGTTTCAAGGCAGACATCATTCT...GGCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAACCAAGTACAAATCATaGGGCGAAAAGGCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DYRAKIGVRNQTRFWSYATKYKS*GEKAKA Trigger: AGCCTTGGCCTTTTCGCCCAATGATTTGTACTTGGT...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | GGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCCTGTTTGGCACTCGGTaGGCCAGATTTTTCTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: GKNRCEKSNPVLELCKLGLFGTR*ARFFYL Trigger: CAAATAGAAAAATCTGGCCAACCGAGTGCCAAACAG...GCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | GGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCGCCAGCAGTTTGGTCTaGGGGTTCATTTTGAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: GKNRCEKSNPVLELCKLGASSLV*GFILRI Trigger: TATTCTCAAAATGAACCCCAAGACCAAACTGCTGGC...GCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAGAGGTGATACCACCTaGCAGCTGGACTTTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: DYRAKIGVRNQTRFWSYARGDTT*QLDFLD Trigger: ATCAAGAAAGTCCAGCTGCAAGGTGGTATCACCTCT...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS-3UTR CAA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAGTGATATCCATACCATaGATGGACCCAGACAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DYRAKIGVRNQTRFWSYAVISIP*MDPDKE Trigger: CTCCTTGTCTGGGTCCATCAATGGTATGGATATCAC...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CAA 90 bp | GACTATAGGGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCATGGCATTTGAGACCATaGGGAACATGTCCATTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DYRAKIGVRNQTRFWSYAWHLRP*GTCPLK Trigger: CTTCAATGGACATGTTCCCAATGGTCTCAAATGCCA...TGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCCCTATAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS-3UTR CAA 90 bp | GGCAAAAATAGGTGTGAGAAATCAAACCCGGTTCTGGAGTTATGCAAACTTGGCGCCAGATTTTTCTATTaGGAAGATCCAGTTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GKNRCEKSNPVLELCKLGARFFY*EDPVPT Trigger: TGTGGGAACTGGATCTTCCAAATAGAAAAATCTGGC...GCCAAGTTTGCATAACTCCAGAACCGGGTTTGATTTCTCACACCTATTTTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS TCA 90 bp | TCAGCAGTACCAAATGGAAAGACAATGTCCTGGACAGCTTCAAAGTaGCAAGTTGCAATGAGAGTCTCTTTGAAATCGGTGAAGTTAACG | + |
|
Preference number: 5 (lower is better) Translates to: SAVPNGKTMSWTASK*QVAMRVSLKSVKLT Trigger: CGTTAACTTCACCGATTTCAAAGAGACTCTCATTGCAACTTGTCACTTTGAAGCTGTCCAGGACATTGTCTTTCCATTTGGTACTGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS CCA 90 bp | AGTACTCAAGACTATTCTTTTCATCTGTCCTGTTTGGCACTCGGTTaGCCAGATTTTTCTATTTGGAAGATCCAGTTCCCACACTCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: STQDYSFHLSCLALG*PDFSIWKIQFPHSN Trigger: ATTCGAGTGTGGGAACTGGATCTTCCAAATAGAAAAATCTGGCCAACCGAGTGCCAAACAGGACAGATGAAAAGAATAGTCTTGAGTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS-3UTR CAA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCCAAATGGCATCTCTCTaGGCTATGCTCCAAACCACC | + |
|
Preference number: 5 (lower is better) Translates to: LLRNLESNYIEQNSFACCQMASL*AMLQTT Trigger: GGTGGTTTGGAGCATAGCCAAGAGAGATGCCATTTG...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
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| CDS-3UTR CAA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCTTTCATCTGTCCTGTTaGGCACTCGGTTGGCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LRNLESNYIEQNSFACCIFHLSC*ALGWPD Trigger: ATCTGGCCAACCGAGTGCCAAACAGGACAGATGAAA...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
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| CDS-3UTR CAA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCTGGTCAGGATGGCATTaGAGACCATTGGGAACATGT | + |
|
Preference number: 5 (lower is better) Translates to: LRNLESNYIEQNSFACCIWSGWH*RPLGTC Trigger: ACATGTTCCCAATGGTCTCAAATGCCATCCTGACCA...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
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| CDS-3UTR CAA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCACCAAGTACAAATCATaGGGCGAAAAGGCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRNLESNYIEQNSFACCITKYKS*GEKAKA Trigger: AGCCTTGGCCTTTTCGCCCAATGATTTGTACTTGGT...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
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| CDS-3UTR CAA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCGTCTTGGGGTTCATTTaGAGAATATCCCCGGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRNLESNYIEQNSFACCVLGFI*RISPVV Trigger: CACAACCGGGGATATTCTCAAAATGAACCCCAAGAC...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CAA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCGTATCTGCCAGCAGTTaGGTCTTGGGGTTCATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRNLESNYIEQNSFACCVSASS*VLGFIL Trigger: CAAAATGAACCCCAAGACCAAACTGCTGGCAGATAC...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
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| CDS-3UTR CAA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCAGAGGTGATACCACCTaGCAGCTGGACTTTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLRNLESNYIEQNSFACCRGDTT*QLDFLD Trigger: ATCAAGAAAGTCCAGCTGCAAGGTGGTATCACCTCT...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CAA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCTGGCATTTGAGACCATaGGGAACATGTCCATTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRNLESNYIEQNSFACCWHLRP*GTCPLK Trigger: CTTCAATGGACATGTTCCCAATGGTCTCAAATGCCA...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CAA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCCTGTTTGGCACTCGGTaGGCCAGATTTTTCTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRNLESNYIEQNSFACCLFGTR*ARFFYL Trigger: CAAATAGAAAAATCTGGCCAACCGAGTGCCAAACAG...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CAA 90 bp | CTATTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCGCCAGCAGTTTGGTCTaGGGGTTCATTTTGAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: LLRNLESNYIEQNSFACCASSLV*GFILRI Trigger: TATTCTCAAAATGAACCCCAAGACCAAACTGCTGGC...GCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGGAATCTTGAAAGCAATTATATAGAGCAGAATTCCTTTGCGTGCTGCATCGCCAGATTTTTCTATTaGGAAGATCCAGTTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LRNLESNYIEQNSFACCIARFFY*EDPVPT Trigger: TGTGGGAACTGGATCTTCCAAATAGAAAAATCTGGC...GATGCAGCACGCAAAGGAATTCTGCTCTATATAATTGCTTTCAAGATTCCTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126766.2 |
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| CDS CAA 72 bp | TCATCTCGGCACCTAGAGAAGACCACGCTGGTGGCATaGCCGACATTGAGGCCCGCCGCGGGGCTGCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: SSRHLEKTTLVA*PTLRPAAGLPQ Trigger: TTGTGGCAGCCCCGCGGCGGGCCTCAATGTCGGCAATGCCACCAGCGTGGTCTTCTCTAGGTGCCGAGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CAA 72 bp | CACCTAGAGAAGACCACGCTGGTGGCATTGCCGACATaGAGGCCCGCCGCGGGGCTGCCACAAATGGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: HLEKTTLVALPT*RPAAGLPQMAS Trigger: AGATGCCATTTGTGGCAGCCCCGCGGCGGGCCTCAATGTCGGCAATGCCACCAGCGTGGTCTTCTCTAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CAA 90 bp | TCATCTCGGCACCTAGAGAAGACCACGCTGGTGGCATTGCCGACATaGAGGCCCGCCGCGGGGCTGCCACAAATGGCATCTCTCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSRHLEKTTLVALPT*RPAAGLPQMASLLA Trigger: AGCCAAGAGAGATGCCATTTGTGGCAGCCCCGCGGCGGGCCTCAATGTCGGCAATGCCACCAGCGTGGTCTTCTCTAGGTGCCGAGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
||
| CDS CAA 90 bp | CCGACATTGAGGCCCGCCGCGGGGCTGCCACAAATGGCATCTCTCTaGGCTATGCTCCAAACCACCACACTTCCATCATCTGGGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PTLRPAAGLPQMASL*AMLQTTTLPSSGPP Trigger: TGGTGGCCCAGATGATGGAAGTGTGGTGGTTTGGAGCATAGCCAAGAGAGATGCCATTTGTGGCAGCCCCGCGGCGGGCCTCAATGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CCA 72 bp | GGCCCGCCGCGGGGCTGCCACAAATGGCATCTCTCTTaGCTATGCTCCAAACCACCACACTTCCATCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GPPRGCHKWHLS*LCSKPPHFHHL Trigger: CAGATGATGGAAGTGTGGTGGTTTGGAGCATAGCCAAGAGAGATGCCATTTGTGGCAGCCCCGCGGCGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CAA 90 bp | ACAAACATCTCATCTCGGCACCTAGAGAAGACCACGCTGGTGGCATaGCCGACATTGAGGCCCGCCGCGGGGCTGCCACAAATGGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: TNISSRHLEKTTLVA*PTLRPAAGLPQMAS Trigger: AGATGCCATTTGTGGCAGCCCCGCGGCGGGCCTCAATGTCGGCAATGCCACCAGCGTGGTCTTCTCTAGGTGCCGAGATGAGATGTTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CAA 72 bp | AGGCCCGCCGCGGGGCTGCCACAAATGGCATCTCTCTaGGCTATGCTCCAAACCACCACACTTCCATCATCT | + |
|
Preference number: 6 (lower is better) Translates to: RPAAGLPQMASL*AMLQTTTLPSS Trigger: AGATGATGGAAGTGTGGTGGTTTGGAGCATAGCCAAGAGAGATGCCATTTGTGGCAGCCCCGCGGCGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CAA 90 bp | CCACCCATCTTCAGGCACCTGAGAGCCGACACTCCCAAGCTGAATTaGTCCTTCACAGGCCCAGTATCTGCCAGCAGTTTGGTCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PPIFRHLRADTPKLN*SFTGPVSASSLVLG Trigger: CCCCAAGACCAAACTGCTGGCAGATACTGGGCCTGTGAAGGACAAATTCAGCTTGGGAGTGTCGGCTCTCAGGTGCCTGAAGATGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CAA 90 bp | CCATGGCAGGTCATGTTGGGCACCGTGATCCGAAGCAGCTCCCGTTaGGACATGGTGTGCCACACCCTGATGTCTTTCTTGGCACAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PWQVMLGTVIRSSSR*DMVCHTLMSFLAQV Trigger: TACCTGTGCCAAGAAAGACATCAGGGTGTGGCACACCATGTCCAAACGGGAGCTGCTTCGGATCACGGTGCCCAACATGACCTGCCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS TCA 72 bp | CGATATACTGGTTTCCTGGACTTATCCGCATGGCCATaGTGTTGCCGCTGTGCCCCACCCCGACGTGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RYTGFLDLSAWP*CCRCAPPRRES Trigger: TGACTCACGTCGGGGTGGGGCACAGCGGCAACATCATGGCCATGCGGATAAGTCCAGGAAACCAGTATATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS CAA 72 bp | GTCATGTTGGGCACCGTGATCCGAAGCAGCTCCCGTTaGGACATGGTGTGCCACACCCTGATGTCTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VMLGTVIRSSSR*DMVCHTLMSFL Trigger: CAAGAAAGACATCAGGGTGTGGCACACCATGTCCAAACGGGAGCTGCTTCGGATCACGGTGCCCAACATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS CAA 72 bp | CCATCTCTCATGAAGTCAATGCCATGGCAGGTCATGTaGGGCACCGTGATCCGAAGCAGCTCCCGTTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PSLMKSMPWQVM*GTVIRSSSRLD Trigger: GTCCAAACGGGAGCTGCTTCGGATCACGGTGCCCAACATGACCTGCCATGGCATTGACTTCATGAGAGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS CAA 72 bp | CATGTCCCATCGGTGCTGGCAGTGACACACTCCTCGTaGTTCTTCTTCACCCTGATGCAGGACACGGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HVPSVLAVTHSS*FFFTLMQDTED Trigger: GTCTTCCGTGTCCTGCATCAGGGTGAAGAAGAACAACGAGGAGTGTGTCACTGCCAGCACCGATGGGACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS CAA 90 bp | ATGCTCTTCCCATCTCTCATGAAGTCAATGCCATGGCAGGTCATGTaGGGCACCGTGATCCGAAGCAGCTCCCGTTTGGACATGGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: MLFPSLMKSMPWQVM*GTVIRSSSRLDMVC Trigger: GCACACCATGTCCAAACGGGAGCTGCTTCGGATCACGGTGCCCAACATGACCTGCCATGGCATTGACTTCATGAGAGATGGGAAGAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS CAA 72 bp | TTCAGGCACCTGAGAGCCGACACTCCCAAGCTGAATTaGTCCTTCACAGGCCCAGTATCTGCCAGCAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FRHLRADTPKLN*SFTGPVSASSL Trigger: CAAACTGCTGGCAGATACTGGGCCTGTGAAGGACAAATTCAGCTTGGGAGTGTCGGCTCTCAGGTGCCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CAA 72 bp | TCCTTCTCCCCGGAGCGTGATAGAGGTGATACCACCTaGCAGCTGGACTTTCTTGATAGGCTTGTAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SFSPERDRGDTT*QLDFLDRLVAG Trigger: CCCAGCTACAAGCCTATCAAGAAAGTCCAGCTGCAAGGTGGTATCACCTCTATCACGCTCCGGGGAGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CAA 90 bp | CAAATGATGCATGTCCCATCGGTGCTGGCAGTGACACACTCCTCGTaGTTCTTCTTCACCCTGATGCAGGACACGGAAGACTTGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QMMHVPSVLAVTHSS*FFFTLMQDTEDLCS Trigger: GGAGCACAAGTCTTCCGTGTCCTGCATCAGGGTGAAGAAGAACAACGAGGAGTGTGTCACTGCCAGCACCGATGGGACATGCATCATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS TCA 72 bp | TTGGGCGAAAAGGCCAAGGCTTCGATTTTGCCCTTGTaGAGTGACAGCCGAGCGATCAGCTCCCTCTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LGEKAKASILPL*SDSRAISSLFL Trigger: TAAGAAGAGGGAGCTGATCGCTCGGCTGTCACTTCACAAGGGCAAAATCGAAGCCTTGGCCTTTTCGCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS TCA 72 bp | TCACTGGTGGTAGCAATGGCCGTCACTCCGATCCTGTaGGCACTGTTAATGGTGTACATCAGCCGACCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLVVAMAVTPIL*ALLMVYISRPD Trigger: ATCAGGTCGGCTGATGTACACCATTAACAGTGCTCACAGGATCGGAGTGACGGCCATTGCTACCACCAGTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS GCA 72 bp | ACAAATCATTGGGCGAAAAGGCCAAGGCTTCGATTTTaGCCTTGTGAAGTGACAGCCGAGCGATCAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TNHWAKRPRLRF*PCEVTAERSAP Trigger: GGGAGCTGATCGCTCGGCTGTCACTTCACAAGGGCAAAATCGAAGCCTTGGCCTTTTCGCCCAATGATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CCA 72 bp | ATGATGCTCTTCCCATCTCTCATGAAGTCAATGCCATaGCAGGTCATGTTGGGCACCGTGATCCGAAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MMLFPSLMKSMP*QVMLGTVIRSS Trigger: GCTGCTTCGGATCACGGTGCCCAACATGACCTGCCATGGCATTGACTTCATGAGAGATGGGAAGAGCATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS TCA 72 bp | TGGTCATGGCCACCTGTAACAAAGTGCCCTCCTTCCTaGGTGATATCCATACCATTGATGGACCCAGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: WSWPPVTKCPPS*VISIPLMDPDK Trigger: CTTGTCTGGGTCCATCAATGGTATGGATATCACTCAGGAAGGAGGGCACTTTGTTACAGGTGGCCATGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS TCA 72 bp | ATTTCCACCTCAAGATGGCTCCATCTGCGCTCACACTaGCGATATACTGGTTTCCTGGACTTATCCGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: ISTSRWLHLRSH*RYTGFLDLSAW Trigger: CCATGCGGATAAGTCCAGGAAACCAGTATATCGTCAGTGTGAGCGCAGATGGAGCCATCTTGAGGTGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS CCA 72 bp | AAGATGGCTCCATCTGCGCTCACACTGACGATATACTaGTTTCCTGGACTTATCCGCATGGCCATGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KMAPSALTLTIY*FPGLIRMAMML Trigger: CAACATCATGGCCATGCGGATAAGTCCAGGAAACCAGTATATCGTCAGTGTGAGCGCAGATGGAGCCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS CAA 72 bp | CGTTTGGACATGGTGTGCCACACCCTGATGTCTTTCTaGGCACAGGTAGCAAACAGCTCAGCAGTACCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: RLDMVCHTLMSF*AQVANSSAVPN Trigger: ATTTGGTACTGCTGAGCTGTTTGCTACCTGTGCCAAGAAAGACATCAGGGTGTGGCACACCATGTCCAAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS GCA 72 bp | AGCAAATGGGTATTTCCACCTCAAGATGGCTCCATCTaGGCTCACACTGACGATATACTGGTTTCCTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: SKWVFPPQDGSI*AHTDDILVSWT Trigger: AGTCCAGGAAACCAGTATATCGTCAGTGTGAGCGCAGATGGAGCCATCTTGAGGTGGAAATACCCATTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
||
| CDS CCA 72 bp | CATCTGGGCCACCAAGTGAAACCAAGTACAAATCATTaGGCGAAAAGGCCAAGGCTTCGATTTTGCCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: HLGHQVKPSTNH*AKRPRLRFCPC Trigger: ACAAGGGCAAAATCGAAGCCTTGGCCTTTTCGCCCAATGATTTGTACTTGGTTTCACTTGGTGGCCCAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
||
| CDS CAA 72 bp | TCATCTGGGCCACCAAGTGAAACCAAGTACAAATCATaGGGCGAAAAGGCCAAGGCTTCGATTTTGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSGPPSETKYKS*GEKAKASILPL Trigger: CAAGGGCAAAATCGAAGCCTTGGCCTTTTCGCCCAATGATTTGTACTTGGTTTCACTTGGTGGCCCAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CAA 90 bp | TTTTCATCTGTCCTGTTTGGCACTCGGTTGGCCAGATTTTTCTATTaGGAAGATCCAGTTCCCACACTCGAATTGTCCCATTCCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FSSVLFGTRLARFFY*EDPVPTLELSHSQQ Trigger: CTGCTGGGAATGGGACAATTCGAGTGTGGGAACTGGATCTTCCAAATAGAAAAATCTGGCCAACCGAGTGCCAAACAGGACAGATGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
||
| CDS CCA 72 bp | CTTGTCCAGAGGCAATATAATCTCCTTCCTTGGAGATaGTCACACAGGAGACGTTGTTACCATGGCCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: LVQRQYNLLPWR*SHRRRCYHGHV Trigger: TACATGGCCATGGTAACAACGTCTCCTGTGTGACCATCTCCAAGGAAGGAGATTATATTGCCTCTGGACAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
||
| CDS CAA 72 bp | GTCCTGTTTGGCACTCGGTTGGCCAGATTTTTCTATTaGGAAGATCCAGTTCCCACACTCGAATTGTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VLFGTRLARFFY*EDPVPTLELSH Trigger: ATGGGACAATTCGAGTGTGGGAACTGGATCTTCCAAATAGAAAAATCTGGCCAACCGAGTGCCAAACAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
||
| CDS CAA 90 bp | AAAGTCCCACAGAATGATGTCTGCCTTGAAACCCATGAAGGTGACTaGTCCAGAGGCAATATAATCTCCTTCCTTGGAGATGGTCACACA | + |
|
Preference number: 6 (lower is better) Translates to: KVPQNDVCLETHEGD*SRGNIISFLGDGHT Trigger: TGTGTGACCATCTCCAAGGAAGGAGATTATATTGCCTCTGGACAAGTCACCTTCATGGGTTTCAAGGCAGACATCATTCTGTGGGACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS TCA 72 bp | GGACCCAGACAAGGAGCCTTCCAACTCTCTGATTACTaGTCCATCAAATACTTCCCAGTAAGCAATCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GPRQGAFQLSDY*SIKYFPVSNLP Trigger: AGGAAGATTGCTTACTGGGAAGTATTTGATGGATCAGTAATCAGAGAGTTGGAAGGCTCCTTGTCTGGGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS CAA 90 bp | GTCGGCCATTCCAGTACTCAAGACTATTCTTTTCATCTGTCCTGTTaGGCACTCGGTTGGCCAGATTTTTCTATTTGGAAGATCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: VGHSSTQDYSFHLSC*ALGWPDFSIWKIQF Trigger: GAACTGGATCTTCCAAATAGAAAAATCTGGCCAACCGAGTGCCAAACAGGACAGATGAAAAGAATAGTCTTGAGTACTGGAATGGCCGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS TCA 72 bp | TGGAGCAAAGGCTCTGATTTTTCCATCATCCCATGCTaGGATGATGCTCTTCCCATCTCTCATGAAGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: WSKGSDFSIIPC*DDALPISHEVN Trigger: ATTGACTTCATGAGAGATGGGAAGAGCATCATCTCAGCATGGGATGATGGAAAAATCAGAGCCTTTGCTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021287.12 |
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| CDS CAA 72 bp | CAGAATGATGTCTGCCTTGAAACCCATGAAGGTGACTaGTCCAGAGGCAATATAATCTCCTTCCTTGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: QNDVCLETHEGD*SRGNIISFLGD Trigger: ATCTCCAAGGAAGGAGATTATATTGCCTCTGGACAAGTCACCTTCATGGGTTTCAAGGCAGACATCATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CAA 90 bp | CAGTACTCAAGACTATTCTTTTCATCTGTCCTGTTTGGCACTCGGTaGGCCAGATTTTTCTATTTGGAAGATCCAGTTCCCACACTCGAA | + |
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Preference number: 6 (lower is better) Translates to: QYSRLFFSSVLFGTR*ARFFYLEDPVPTLE Trigger: TTCGAGTGTGGGAACTGGATCTTCCAAATAGAAAAATCTGGCCAACCGAGTGCCAAACAGGACAGATGAAAAGAATAGTCTTGAGTACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CCA 72 bp | GACTATTCTTTTCATCTGTCCTGTTTGGCACTCGGTTaGCCAGATTTTTCTATTTGGAAGATCCAGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: DYSFHLSCLALG*PDFSIWKIQFP Trigger: TGGGAACTGGATCTTCCAAATAGAAAAATCTGGCCAACCGAGTGCCAAACAGGACAGATGAAAAGAATAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CCA 72 bp | TCCTTGGAGATGGTCACACAGGAGACGTTGTTACCATaGCCATGTAGGAAATTCTGCTCATTAGTATTTATT | + |
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Preference number: 6 (lower is better) Translates to: SLEMVTQETLLP*PCRKFCSLVFI Trigger: AATAAATACTAATGAGCAGAATTTCCTACATGGCCATGGTAACAACGTCTCCTGTGTGACCATCTCCAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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| CDS CAA 72 bp | TCCAGTACTCAAGACTATTCTTTTCATCTGTCCTGTTaGGCACTCGGTTGGCCAGATTTTTCTATTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSTQDYSFHLSC*ALGWPDFSIWK Trigger: CTTCCAAATAGAAAAATCTGGCCAACCGAGTGCCAAACAGGACAGATGAAAAGAATAGTCTTGAGTACTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021287.12 ENSMUST00000126766.2 |
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