Pregenerated sensors for CFAP47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073077Ensembl transcript IDs: ENSMUST00000101410.3, ENSMUST00000114021.4, ENSMUST00000179788.2, ENSMUST00000197180.6
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GATACTGCATCCTGGAACTTCAGCACCAGGGGATTTACCCGCAGCTaGACTTCCTTCTTAAGGGTATCTATATCCCGAGGGGCTACTGAG | + |
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Preference number: 5 (lower is better) Translates to: DTASWNFSTRGFTRS*TSFLRVSISRGATE Trigger: CTCAGTAGCCCCTCGGGATATAGATACCCTTAAGAAGGAAGTTCAGCTGCGGGTAAATCCCCTGGTGCTGAAGTTCCAGGATGCAGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS GCA 90 bp | CAAATTGTGTACAGTAAGAGGGAGGCGGTATACTTTCCCAGATACTaGATCCTGGAACTTCAGCACCAGGGGATTTACCCGCAGCTGAAC | + |
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Preference number: 5 (lower is better) Translates to: QIVYSKREAVYFPRY*ILELQHQGIYPQLN Trigger: GTTCAGCTGCGGGTAAATCCCCTGGTGCTGAAGTTCCAGGATGCAGTATCTGGGAAAGTATACCGCCTCCCTCTTACTGTACACAATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS CCA 90 bp | AGAAGCAAGCTCCTTATCCAGACTGGTCAACAACAATTTGAACTGTaGCTTCGATGGCTCTTGAAACCTGATCTTCTGGTTCCAACGGCC | + |
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Preference number: 5 (lower is better) Translates to: RSKLLIQTGQQQFEL*LRWLLKPDLLVPTA Trigger: GGCCGTTGGAACCAGAAGATCAGGTTTCAAGAGCCATCGAAGCCACAGTTCAAATTGTTGTTGACCAGTCTGGATAAGGAGCTTGCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS CCA 90 bp | ATCCCTTCTTATTGTCTCAGGAATAGAAAGAGAATGGGGTCCTTCTaGCCAGCCAAAGAGACTGAACCACGTCTGAGCTGCATTCACAAC | + |
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Preference number: 5 (lower is better) Translates to: IPSYCLRNRKRMGSF*PAKETEPRLSCIHN Trigger: GTTGTGAATGCAGCTCAGACGTGGTTCAGTCTCTTTGGCTGGCCAGAAGGACCCCATTCTCTTTCTATTCCTGAGACAATAAGAAGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
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| CDS TCA 90 bp | GCTCTCCAGAGTACCAGAGATAGCCCTTCGTTCATATTCAAGAGTTaGCATCTGTTGCTGTGCTGCAAAAGCCAAAGCCTTTTCCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: ALQSTRDSPSFIFKS*HLLLCCKSQSLFLC Trigger: GCAAAGGAAAAGGCTTTGGCTTTTGCAGCACAGCAACAGATGTCAACTCTTGAATATGAACGAAGGGCTATCTCTGGTACTCTGGAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS GCA 90 bp | GTTGGCCTGACATCTTATGATAACTGGAGAACTTTTAGGTGGTGGTaGCTGGGGAAGTCCAATGATAGGGTACATCCAGTGTATTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: VGLTSYDNWRTFRWW*LGKSNDRVHPVYCL Trigger: CAAGCAATACACTGGATGTACCCTATCATTGGACTTCCCCAGGCACCACCACCTAAAAGTTCTCCAGTTATCATAAGATGTCAGGCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS CCA 90 bp | CTCCTTATCCAGACTGGTCAACAACAATTTGAACTGTGGCTTCGATaGCTCTTGAAACCTGATCTTCTGGTTCCAACGGCCCAAATTGTG | + |
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Preference number: 5 (lower is better) Translates to: LLIQTGQQQFELWLR*LLKPDLLVPTAQIV Trigger: CACAATTTGGGCCGTTGGAACCAGAAGATCAGGTTTCAAGAGCCATCGAAGCCACAGTTCAAATTGTTGTTGACCAGTCTGGATAAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS CCA 90 bp | GGAGCAAATCGTAGAGGAATTGAAACGGTTCCTTCTAAAGCTGCTTaGATGCTTGGAAGTGGTTTCTGGAATGGCCGTTCTCCTGATACA | + |
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Preference number: 5 (lower is better) Translates to: GANRRGIETVPSKAA*MLGSGFWNGRSPDT Trigger: TGTATCAGGAGAACGGCCATTCCAGAAACCACTTCCAAGCATCCAAGCAGCTTTAGAAGGAACCGTTTCAATTCCTCTACGATTTGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS TCA 90 bp | GTATGCTGCCAGCTGTGTAGCAAACACAAGGCCATCAAGAAGGTCTaGATCAAAATTCACTATCCATCTTCCAGGGGGCACATCACTTTT | + |
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Preference number: 5 (lower is better) Translates to: VCCQLCSKHKAIKKV*IKIHYPSSRGHITF Trigger: AAAAGTGATGTGCCCCCTGGAAGATGGATAGTGAATTTTGATTCAGACCTTCTTGATGGCCTTGTGTTTGCTACACAGCTGGCAGCATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
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| CDS GCA 90 bp | TGGTGGTGCCTGGGGAAGTCCAATGATAGGGTACATCCAGTGTATTaGTTGAATTTCTCCATAGCCTACTCCCATATATCTCTTAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: WWCLGKSNDRVHPVY*LNFSIAYSHISLSL Trigger: GAGACTAAGAGATATATGGGAGTAGGCTATGGAGAAATTCAAGCAATACACTGGATGTACCCTATCATTGGACTTCCCCAGGCACCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS CCA 90 bp | TTTGTTGGCCTGACATCTTATGATAACTGGAGAACTTTTAGGTGGTaGTGCCTGGGGAAGTCCAATGATAGGGTACATCCAGTGTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: FVGLTSYDNWRTFRW*CLGKSNDRVHPVYC Trigger: GCAATACACTGGATGTACCCTATCATTGGACTTCCCCAGGCACCACCACCTAAAAGTTCTCCAGTTATCATAAGATGTCAGGCCAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS CCA 90 bp | TGGTGTCAAAACTTTGCTGCATTCCTGTTTTTCTTGGTGAGTGGTTaGCTTCGATTTAAGCCCTCTGGTGATCTTTCTCTGCAGACATTC | + |
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Preference number: 5 (lower is better) Translates to: WCQNFAAFLFFLVSG*LRFKPSGDLSLQTF Trigger: GAATGTCTGCAGAGAAAGATCACCAGAGGGCTTAAATCGAAGCCAACCACTCACCAAGAAAAACAGGAATGCAGCAAAGTTTTGACACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS TCA 90 bp | TTAGCCTTTACTATACCACTACTTGGAGAAATGACAATAGGTAACTaGCCCTGGTATTCTGCTTTAAACTTCCCTGGAGCTTTGCCACGG | + |
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Preference number: 5 (lower is better) Translates to: LAFTIPLLGEMTIGN*PWYSALNFPGALPR Trigger: CCGTGGCAAAGCTCCAGGGAAGTTTAAAGCAGAATACCAGGGTCAGTTACCTATTGTCATTTCTCCAAGTAGTGGTATAGTAAAGGCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS TCA 90 bp | ATTTGCTTTGGTGTCAAAACTTTGCTGCATTCCTGTTTTTCTTGGTaGGTGGTTGGCTTCGATTTAAGCCCTCTGGTGATCTTTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: ICFGVKTLLHSCFSW*VVGFDLSPLVIFLC Trigger: GCAGAGAAAGATCACCAGAGGGCTTAAATCGAAGCCAACCACTCACCAAGAAAAACAGGAATGCAGCAAAGTTTTGACACCAAAGCAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS TCA 90 bp | CCAAGCATTGACACTTCCACTTTTTCTTCTCTTTGTTTGTTGGCCTaGCATCTTATGATAACTGGAGAACTTTTAGGTGGTGGTGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: PSIDTSTFSSLCLLA*HLMITGELLGGGAW Trigger: CCAGGCACCACCACCTAAAAGTTCTCCAGTTATCATAAGATGTCAGGCCAACAAACAAAGAGAAGAAAAAGTGGAAGTGTCAATGCTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS TCA 90 bp | TCCCACAGAATCAAATCTCACAAAGAGAGCATAGTCTTGCCTATGTaGAGGTCCAACATCCTTTTTAGTATCAACTACCAGCTTTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: SHRIKSHKESIVLPM*RSNILFSINYQLWA Trigger: AGCCCAAAGCTGGTAGTTGATACTAAAAAGGATGTTGGACCTTCACATAGGCAAGACTATGCTCTCTTTGTGAGATTTGATTCTGTGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS TCA 90 bp | TGTGCTGGCAAATACATAAGTGTTGTGGATTCCACGAGAATAACATaGAAATCTCCACCGCTTGGAAAGGGGTTTTTCACATTCACAGTG | + |
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Preference number: 5 (lower is better) Translates to: CAGKYISVVDSTRIT*KSPPLGKGFFTFTV Trigger: CACTGTGAATGTGAAAAACCCCTTTCCAAGCGGTGGAGATTTTCATGTTATTCTCGTGGAATCCACAACACTTATGTATTTGCCAGCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS GCA 90 bp | TCAACCACACGCACTTTGATGTTCAAGAATGTTTCAGGACAACCTTaGAAACTCACTCTTGCCATTTCATTTACAATTTGGGCCTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: STTRTLMFKNVSGQP*KLTLAISFTIWAWS Trigger: AGACCAGGCCCAAATTGTAAATGAAATGGCAAGAGTGAGTTTGCAAGGTTGTCCTGAAACATTCTTGAACATCAAAGTGCGTGTGGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS GCA 90 bp | ACTTGTAGCAAAAATTCTCCCTTGTCCGGAGAACTAAAACCTGGCTaGCATGTGACTTCACATTCCAATGAACAATATGGATCAACAGTG | + |
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Preference number: 5 (lower is better) Translates to: TCSKNSPLSGELKPG*HVTSHSNEQYGSTV Trigger: CACTGTTGATCCATATTGTTCATTGGAATGTGAAGTCACATGGCAGCCAGGTTTTAGTTCTCCGGACAAGGGAGAATTTTTGCTACAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS GCA 90 bp | TTGCCACTTCTACCGGAGAAAATGTTATGCCACATTCTGCAGATGTaGCTTCTTCTACCTCTATTGCATACATATAAGGACCTTCCACAT | + |
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Preference number: 5 (lower is better) Translates to: LPLLPEKMLCHILQM*LLLPLLHTYKDLPH Trigger: ATGTGGAAGGTCCTTATATGTATGCAATAGAGGTAGAAGAAGGCACATCTGCAGAATGTGGCATAACATTTTCTCCGGTAGAAGTGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS GCA 90 bp | GTCATATGTTGCCACTTCTACCGGAGAAAATGTTATGCCACATTCTaGAGATGTGCCTTCTTCTACCTCTATTGCATACATATAAGGACC | + |
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Preference number: 5 (lower is better) Translates to: VICCHFYRRKCYATF*RCAFFYLYCIHIRT Trigger: GGTCCTTATATGTATGCAATAGAGGTAGAAGAAGGCACATCTGCAGAATGTGGCATAACATTTTCTCCGGTAGAAGTGGCAACATATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS CCA 90 bp | CAACCTTGCAAACTCACTCTTGCCATTTCATTTACAATTTGGGCCTaGTCTGCACAGAAATCCACTTTGATGACCATTGATGTTTTAGCC | + |
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Preference number: 5 (lower is better) Translates to: QPCKLTLAISFTIWA*SAQKSTLMTIDVLA Trigger: GGCTAAAACATCAATGGTCATCAAAGTGGATTTCTGTGCAGACCAGGCCCAAATTGTAAATGAAATGGCAAGAGTGAGTTTGCAAGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS CCA 90 bp | TGTGGTTGCTGGAGAATACCATACAATATAGGTCACACTTTCCAATaGAGCCAATGTCATTTCTACTGGTCCATTAAGGGCAGAACATGT | + |
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Preference number: 5 (lower is better) Translates to: CGCWRIPYNIGHTFQ*SQCHFYWSIKGRTC Trigger: ACATGTTCTGCCCTTAATGGACCAGTAGAAATGACATTGGCTCCATTGGAAAGTGTGACCTATATTGTATGGTATTCTCCAGCAACCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
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| CDS CCA 90 bp | ATCCAAGCCCAAAACACACCTTTCTTCTTTATAGCCTGTGGTTGCTaGAGAATACCATACAATATAGGTCACACTTTCCAATGGAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: IQAQNTPFFFIACGC*RIPYNIGHTFQWSQ Trigger: TTGGCTCCATTGGAAAGTGTGACCTATATTGTATGGTATTCTCCAGCAACCACAGGCTATAAAGAAGAAAGGTGTGTTTTGGGCTTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114021.4 |
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| CDS TCA 90 bp | TTGGCAACCAATGTGCCAAAATCAACTACTGGTACAATTTCCAGCTaGCAGACTGGAATCAGCCCAAATAGAGGAATATCTAGGACTTTA | + |
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Preference number: 5 (lower is better) Translates to: LATNVPKSTTGTISS*QTGISPNRGISRTL Trigger: TAAAGTCCTAGATATTCCTCTATTTGGGCTGATTCCAGTCTGTCAGCTGGAAATTGTACCAGTAGTTGATTTTGGCACATTGGTTGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS TCA 90 bp | AGCTGCTTGGATGCTTGGAAGTGGTTTCTGGAATGGCCGTTCTCCTaGTACAATTTGAGGTTTAATTTGAAGAGATTGCATATGGAAATC | + |
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Preference number: 5 (lower is better) Translates to: SCLDAWKWFLEWPFS*YNLRFNLKRLHMEI Trigger: GATTTCCATATGCAATCTCTTCAAATTAAACCTCAAATTGTATCAGGAGAACGGCCATTCCAGAAACCACTTCCAAGCATCCAAGCAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS GCA 90 bp | TTTGATGTTCAAGAATGTTTCAGGACAACCTTGCAAACTCACTCTTaGCATTTCATTTACAATTTGGGCCTGGTCTGCACAGAAATCCAC | + |
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Preference number: 5 (lower is better) Translates to: FDVQECFRTTLQTHS*HFIYNLGLVCTEIH Trigger: GTGGATTTCTGTGCAGACCAGGCCCAAATTGTAAATGAAATGGCAAGAGTGAGTTTGCAAGGTTGTCCTGAAACATTCTTGAACATCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS GCA 90 bp | AAATGTTATGCCACATTCTGCAGATGTGCCTTCTTCTACCTCTATTaGATACATATAAGGACCTTCCACATTTTTGCACTCCCCTGCATT | + |
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Preference number: 5 (lower is better) Translates to: KCYATFCRCAFFYLY*IHIRTFHIFALPCI Trigger: AATGCAGGGGAGTGCAAAAATGTGGAAGGTCCTTATATGTATGCAATAGAGGTAGAAGAAGGCACATCTGCAGAATGTGGCATAACATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS GCA 90 bp | AATATTTGTTCCCAGCTCTTCTCCAACACAATCATCTTGCATTATTaGCACCCAGTTTATGGATTCAGGGCTATTGTTATACAGAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: NICSQLFSNTIILHY*HPVYGFRAIVIQKS Trigger: GCTCTTCTGTATAACAATAGCCCTGAATCCATAAACTGGGTGGCAATAATGCAAGATGATTGTGTTGGAGAAGAGCTGGGAACAAATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS GCA 90 bp | ATTTGCATGGTGAATAGCAACCTTTGCTCTTGTATCAAACTTTTCTaGTACAGAGGGTGTACAGGAGATATTAAGAACAGTTATTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: ICMVNSNLCSCIKLF*YRGCTGDIKNSYSP Trigger: GGGGGAATAACTGTTCTTAATATCTCCTGTACACCCTCTGTAGCAGAAAAGTTTGATACAAGAGCAAAGGTTGCTATTCACCATGCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS GCA 90 bp | AGCCTTAAAGGAATTAATAAGGACCGGAAAGCTAAAGTCATATGTTaGCACTTCTACCGGAGAAAATGTTATGCCACATTCTGCAGATGT | + |
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Preference number: 5 (lower is better) Translates to: SLKGINKDRKAKVIC*HFYRRKCYATFCRC Trigger: ACATCTGCAGAATGTGGCATAACATTTTCTCCGGTAGAAGTGGCAACATATGACTTTAGCTTTCCGGTCCTTATTAATTCCTTTAAGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS CCA 90 bp | GCTCTTCTCCAACACAATCATCTTGCATTATTGCCACCCAGTTTATaGATTCAGGGCTATTGTTATACAGAAGAGCATGTTCAAGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: ALLQHNHLALLPPSL*IQGYCYTEEHVQVL Trigger: CAAAACTTGAACATGCTCTTCTGTATAACAATAGCCCTGAATCCATAAACTGGGTGGCAATAATGCAAGATGATTGTGTTGGAGAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS CCA 90 bp | AACATAATTGCACCTTTGAATGTGCCACGTTTCCAAGGACATACATaGAGAGTATATGGAATTGAGTCGTCAGGTTCTATGGTGATAAAG | + |
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Preference number: 5 (lower is better) Translates to: NIIAPLNVPRFQGHT*RVYGIESSGSMVIK Trigger: CTTTATCACCATAGAACCTGACGACTCAATTCCATATACTCTCCATGTATGTCCTTGGAAACGTGGCACATTCAAAGGTGCAATTATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
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| CDS CCA 90 bp | ATTAGAGCCTTTGATGACTCTGCCATTTGGAAATGTCACAGTAAGTaGGTGAATCTCATCATTATCAAGAAGCTTTGCAGTGGGAATCTT | + |
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Preference number: 5 (lower is better) Translates to: IRAFDDSAIWKCHSK*VNLIIIKKLCSGNL Trigger: AAGATTCCCACTGCAAAGCTTCTTGATAATGATGAGATTCACCCACTTACTGTGACATTTCCAAATGGCAGAGTCATCAAAGGCTCTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS TCA 90 bp | TACAATTTGGGCCTGGTCTGCACAGAAATCCACTTTGATGACCATTaGTGTTTTAGCCTTTACTATACCACTACTTGGAGAAATGACAAT | + |
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Preference number: 5 (lower is better) Translates to: YNLGLVCTEIHFDDH*CFSLYYTTTWRNDN Trigger: ATTGTCATTTCTCCAAGTAGTGGTATAGTAAAGGCTAAAACATCAATGGTCATCAAAGTGGATTTCTGTGCAGACCAGGCCCAAATTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS TCA 90 bp | AATGTAGTTACTGGTTTCCATCCAAATTGGGCAGGGCAATTGAGATaGTTATATAGCCTAACTGTACCACGAAAACAGGTTTTCAACAAG | + |
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Preference number: 5 (lower is better) Translates to: NVVTGFHPNWAGQLR*LYSLTVPRKQVFNK Trigger: CTTGTTGAAAACCTGTTTTCGTGGTACAGTTAGGCTATATAATCATCTCAATTGCCCTGCCCAATTTGGATGGAAACCAGTAACTACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS TCA 90 bp | CTGGAGGTTCTGGAATCTGAGGGATGTAAATTTTCCTGGGTATATTaGAATGTGCAGGAAGGCTCAGTTCTGTTGTATATAAAATGGATT | + |
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Preference number: 5 (lower is better) Translates to: LEVLESEGCKFSWVY*NVQEGSVLLYIKWI Trigger: AATCCATTTTATATACAACAGAACTGAGCCTTCCTGCACATTTCAATATACCCAGGAAAATTTACATCCCTCAGATTCCAGAACCTCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS TCA 90 bp | ACATCTTCACTGGTAGGATTTCTGAAATGTACCATGACAGATGCCTaGAGACCAAGAATAGTTGTTACTCTTTTCAATTCTATAGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: TSSLVGFLKCTMTDA*RPRIVVTLFNSIGL Trigger: CAGGCCTATAGAATTGAAAAGAGTAACAACTATTCTTGGTCTTCAGGCATCTGTCATGGTACATTTCAGAAATCCTACCAGTGAAGATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS GCA 90 bp | TTCCCTGGAGCTTTGCCACGGTTAATAATAGTAATCTCTTTACAATaGACTTTACTATTGGCAACCAATGTGCCAAAATCAACTACTGGT | + |
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Preference number: 5 (lower is better) Translates to: FPGALPRLIIVISLQ*TLLLATNVPKSTTG Trigger: ACCAGTAGTTGATTTTGGCACATTGGTTGCCAATAGTAAAGTGCATTGTAAAGAGATTACTATTATTAACCGTGGCAAAGCTCCAGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS GCA 90 bp | AATTCAAATAAAGAATTGGATCCTCCTTATCTTCTTCTAGAGAAGTaGTGTAGTCAATTGGACTTGGAGGCTCCAATGGAAGGAAATTGG | + |
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Preference number: 5 (lower is better) Translates to: NSNKELDPPYLLLEK*CSQLDLEAPMEGNW Trigger: CCAATTTCCTTCCATTGGAGCCTCCAAGTCCAATTGACTACAGCACTTCTCTAGAAGAAGATAAGGAGGATCCAATTCTTTATTTGAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS CCA 90 bp | AATTACAATCCAAGCCCAAAACACACCTTTCTTCTTTATAGCCTGTaGTTGCTGGAGAATACCATACAATATAGGTCACACTTTCCAATG | + |
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Preference number: 5 (lower is better) Translates to: NYNPSPKHTFLLYSL*LLENTIQYRSHFPM Trigger: CATTGGAAAGTGTGACCTATATTGTATGGTATTCTCCAGCAACCACAGGCTATAAAGAAGAAAGGTGTGTTTTGGGCTTGGATTGTAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114021.4 |
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| CDS CCA 90 bp | AATTTCCAGCCACTTCATATAATCTTTTGGTTCAAGCAAAAATTCTaGCAGCACATGAGAAATGCATCCACCTTGAGCAGTGATAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: NFQPLHIIFWFKQKF*QHMRNASTLSSDKV Trigger: GACTTTATCACTGCTCAAGGTGGATGCATTTCTCATGTGCTGCCAGAATTTTTGCTTGAACCAAAAGATTATATGAAGTGGCTGGAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
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| CDS TCA 90 bp | CAATTACTGAACAGTATTCTTGGCTCTAAAAAGGTGACTTTAGTGTaGCCAACATGTGCAATACACTTCAGTGTCAAAGTATTTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: QLLNSILGSKKVTLV*PTCAIHFSVKVFPP Trigger: TGGAGGAAATACTTTGACACTGAAGTGTATTGCACATGTTGGTCACACTAAAGTCACCTTTTTAGAGCCAAGAATACTGTTCAGTAATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS TCA 90 bp | ACTGCTGTGCTTCGAAGTTTAGCATTTTCACGAATAAAATTACGTTaGATTGGTGGCATGCAGTCATATATCTTGCTAGTAGCATCAACT | + |
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Preference number: 5 (lower is better) Translates to: TAVLRSLAFSRIKLR*IGGMQSYILLVAST Trigger: AGTTGATGCTACTAGCAAGATATATGACTGCATGCCACCAATTCAACGTAATTTTATTCGTGAAAATGCTAAACTTCGAAGCACAGCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS CCA 90 bp | TGTGCTTCGAAGTTTAGCATTTTCACGAATAAAATTACGTTGAATTaGTGGCATGCAGTCATATATCTTGCTAGTAGCATCAACTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: CASKFSIFTNKITLN*WHAVIYLASSINFG Trigger: GCCAAAGTTGATGCTACTAGCAAGATATATGACTGCATGCCACCAATTCAACGTAATTTTATTCGTGAAAATGCTAAACTTCGAAGCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS CCA 90 bp | TTGAGGTTTAATTTGAAGAGATTGCATATGGAAATCTGGAGGTTCTaGAATCTGAGGGATGTAAATTTTCCTGGGTATATTGAAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRFNLKRLHMEIWRF*NLRDVNFPGYIEMC Trigger: GCACATTTCAATATACCCAGGAAAATTTACATCCCTCAGATTCCAGAACCTCCAGATTTCCATATGCAATCTCTTCAAATTAAACCTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS TCA 90 bp | GGAGATATTAAGAACAGTTATTCCCCCAAATGGAATTATTCCCTCTaGTGGAACAATATTAATGGTAGACAAAAGGCTTTGATCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GDIKNSYSPKWNYSL*WNNINGRQKALITN Trigger: GTTTGTGATCAAAGCCTTTTGTCTACCATTAATATTGTTCCATCAGAGGGAATAATTCCATTTGGGGGAATAACTGTTCTTAATATCTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | TCCTGGAACTTCAGCACCAGGGGATTTACCCGCAGCTaGACTTCCTTCTTAAGGGTATCTATATCCCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SWNFSTRGFTRS*TSFLRVSISRG Trigger: CCCTCGGGATATAGATACCCTTAAGAAGGAAGTTCAGCTGCGGGTAAATCCCCTGGTGCTGAAGTTCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS GCA 72 bp | TACAGTAAGAGGGAGGCGGTATACTTTCCCAGATACTaGATCCTGGAACTTCAGCACCAGGGGATTTACCCG | + |
|
Preference number: 6 (lower is better) Translates to: YSKREAVYFPRY*ILELQHQGIYP Trigger: CGGGTAAATCCCCTGGTGCTGAAGTTCCAGGATGCAGTATCTGGGAAAGTATACCGCCTCCCTCTTACTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | AAAGAGAATGGGGTCCTTCTGGCCAGCCAAAGAGACTaGACCACGTCTGAGCTGCATTCACAACCTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: KENGVLLASQRD*TTSELHSQPSE Trigger: TTCAGAAGGTTGTGAATGCAGCTCAGACGTGGTTCAGTCTCTTTGGCTGGCCAGAAGGACCCCATTCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | TATTGTCTCAGGAATAGAAAGAGAATGGGGTCCTTCTaGCCAGCCAAAGAGACTGAACCACGTCTGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: YCLRNRKRMGSF*PAKETEPRLSC Trigger: GCAGCTCAGACGTGGTTCAGTCTCTTTGGCTGGCCAGAAGGACCCCATTCTCTTTCTATTCCTGAGACAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | TGCATCACCCTTTCAACATTATCCACGGGTAACGACTaGCCTGCGTTAATTCCAGGTGGCAGTTTTCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: CITLSTLSTGND*PALIPGGSFPL Trigger: GAGTGGAAAACTGCCACCTGGAATTAACGCAGGCCAGTCGTTACCCGTGGATAATGTTGAAAGGGTGATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | CAGACTGGTCAACAACAATTTGAACTGTGGCTTCGATaGCTCTTGAAACCTGATCTTCTGGTTCCAACGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QTGQQQFELWLR*LLKPDLLVPTA Trigger: GGCCGTTGGAACCAGAAGATCAGGTTTCAAGAGCCATCGAAGCCACAGTTCAAATTGTTGTTGACCAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | CAGCTGTGTAGCAAACACAAGGCCATCAAGAAGGTCTaGATCAAAATTCACTATCCATCTTCCAGGGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QLCSKHKAIKKV*IKIHYPSSRGH Trigger: GTGCCCCCTGGAAGATGGATAGTGAATTTTGATTCAGACCTTCTTGATGGCCTTGTGTTTGCTACACAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | ACATCCCTTCTTATTGTCTCAGGAATAGAAAGAGAATaGGGTCCTTCTGGCCAGCCAAAGAGACTGAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: TSLLIVSGIERE*GPSGQPKRLNH Trigger: GTGGTTCAGTCTCTTTGGCTGGCCAGAAGGACCCCATTCTCTTTCTATTCCTGAGACAATAAGAAGGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | CGTAGAGGAATTGAAACGGTTCCTTCTAAAGCTGCTTaGATGCTTGGAAGTGGTTTCTGGAATGGCCGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RRGIETVPSKAA*MLGSGFWNGRS Trigger: AGAACGGCCATTCCAGAAACCACTTCCAAGCATCCAAGCAGCTTTAGAAGGAACCGTTTCAATTCCTCTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | GGCCTGACATCTTATGATAACTGGAGAACTTTTAGGTaGTGGTGCCTGGGGAAGTCCAATGATAGGGTACAT | + |
|
Preference number: 6 (lower is better) Translates to: GLTSYDNWRTFR*WCLGKSNDRVH Trigger: ATGTACCCTATCATTGGACTTCCCCAGGCACCACCACCTAAAAGTTCTCCAGTTATCATAAGATGTCAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | TGGTGCCTGGGGAAGTCCAATGATAGGGTACATCCAGTGTATTGCTaGAATTTCTCCATAGCCTACTCCCATATATCTCTTAGTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WCLGKSNDRVHPVYC*NFSIAYSHISLSLC Trigger: GCAGAGACTAAGAGATATATGGGAGTAGGCTATGGAGAAATTCAAGCAATACACTGGATGTACCCTATCATTGGACTTCCCCAGGCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | GTCAACAACAATTTGAACTGTGGCTTCGATGGCTCTTaGAACCTGATCTTCTGGTTCCAACGGCCCAAATTG | + |
|
Preference number: 6 (lower is better) Translates to: VNNNLNCGFDGS*NLIFWFQRPKL Trigger: CAATTTGGGCCGTTGGAACCAGAAGATCAGGTTTCAAGAGCCATCGAAGCCACAGTTCAAATTGTTGTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | GGTGTCAAAACTTTGCTGCATTCCTGTTTTTCTTGGTaGGTGGTTGGCTTCGATTTAAGCCCTCTGGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: GVKTLLHSCFSW*VVGFDLSPLVI Trigger: GATCACCAGAGGGCTTAAATCGAAGCCAACCACTCACCAAGAAAAACAGGAATGCAGCAAAGTTTTGACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS GCA 72 bp | ACATCTTATGATAACTGGAGAACTTTTAGGTGGTGGTaGCTGGGGAAGTCCAATGATAGGGTACATCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSYDNWRTFRWW*LGKSNDRVHPV Trigger: CACTGGATGTACCCTATCATTGGACTTCCCCAGGCACCACCACCTAAAAGTTCTCCAGTTATCATAAGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | GCAGTGATAAAGTCTAGAAGTGAGGCATGCTGCAAATaGAGTTGCATCACCCTTTCAACATTATCCACGGGT | + |
|
Preference number: 6 (lower is better) Translates to: AVIKSRSEACCK*SCITLSTLSTG Trigger: ACCCGTGGATAATGTTGAAAGGGTGATGCAACTCCATTTGCAGCATGCCTCACTTCTAGACTTTATCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | AGAAGTGCTGTAGTCAATTGGACTTGGAGGCTCCAATaGAAGGAAATTGGAAGGCAAGGGTATCAAACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSAVVNWTWRLQ*KEIGRQGYQTS Trigger: AGAGGTTTGATACCCTTGCCTTCCAATTTCCTTCCATTGGAGCCTCCAAGTCCAATTGACTACAGCACTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | CTGACATCTTATGATAACTGGAGAACTTTTAGGTGGTaGTGCCTGGGGAAGTCCAATGATAGGGTACATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LTSYDNWRTFRW*CLGKSNDRVHP Trigger: TGGATGTACCCTATCATTGGACTTCCCCAGGCACCACCACCTAAAAGTTCTCCAGTTATCATAAGATGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | TTCTCTTTGTTTGTTGGCCTGACATCTTATGATAACTaGAGAACTTTTAGGTGGTGGTGCCTGGGGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FSLFVGLTSYDN*RTFRWWCLGKS Trigger: GGACTTCCCCAGGCACCACCACCTAAAAGTTCTCCAGTTATCATAAGATGTCAGGCCAACAAACAAAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | GGTCAACAACAATTTGAACTGTGGCTTCGATGGCTCTaGAAACCTGATCTTCTGGTTCCAACGGCCCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: GQQQFELWLRWL*KPDLLVPTAQI Trigger: AATTTGGGCCGTTGGAACCAGAAGATCAGGTTTCAAGAGCCATCGAAGCCACAGTTCAAATTGTTGTTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | GTATTTCCTCCAGAGACTTGTAGCAAAAATTCTCCCTaGTCCGGAGAACTAAAACCTGGCTGCCATGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: VFPPETCSKNSP*SGELKPGCHVT Trigger: AGTCACATGGCAGCCAGGTTTTAGTTCTCCGGACAAGGGAGAATTTTTGCTACAAGTCTCTGGAGGAAATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | GAATTGAAACGGTTCCTTCTAAAGCTGCTTGGATGCTaGGAAGTGGTTTCTGGAATGGCCGTTCTCCTGATA | + |
|
Preference number: 6 (lower is better) Translates to: ELKRFLLKLLGC*EVVSGMAVLLI Trigger: TATCAGGAGAACGGCCATTCCAGAAACCACTTCCAAGCATCCAAGCAGCTTTAGAAGGAACCGTTTCAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | AGTGTCAAAGTATTTCCTCCAGAGACTTGTAGCAAAAATTCTCCCTaGTCCGGAGAACTAAAACCTGGCTGCCATGTGACTTCACATTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVKVFPPETCSKNSP*SGELKPGCHVTSHS Trigger: GGAATGTGAAGTCACATGGCAGCCAGGTTTTAGTTCTCCGGACAAGGGAGAATTTTTGCTACAAGTCTCTGGAGGAAATACTTTGACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | GAATTGGATCCTCCTTATCTTCTTCTAGAGAAGTGCTGTAGTCAATaGGACTTGGAGGCTCCAATGGAAGGAAATTGGAAGGCAAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ELDPPYLLLEKCCSQ*DLEAPMEGNWKARV Trigger: TACCCTTGCCTTCCAATTTCCTTCCATTGGAGCCTCCAAGTCCAATTGACTACAGCACTTCTCTAGAAGAAGATAAGGAGGATCCAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | GGCTTCTTCAATTTTGACATATTAAAGAGCAAAAGGCACTCAATCTaGGTAAGTCCTAAGAGGGCAACAGCCGCACGAATGGTACTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GFFNFDILKSKRHSI*VSPKRATAARMVLL Trigger: GAGCAGTACCATTCGTGCGGCTGTTGCCCTCTTAGGACTTACCAAGATTGAGTGCCTTTTGCTCTTTAATATGTCAAAATTGAAGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | ATCGTAGAGGAATTGAAACGGTTCCTTCTAAAGCTGCTTGGATGCTaGGAAGTGGTTTCTGGAATGGCCGTTCTCCTGATACAATTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: IVEELKRFLLKLLGC*EVVSGMAVLLIQFE Trigger: CTCAAATTGTATCAGGAGAACGGCCATTCCAGAAACCACTTCCAAGCATCCAAGCAGCTTTAGAAGGAACCGTTTCAATTCCTCTACGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | CTCCTTATCCAGACTGGTCAACAACAATTTGAACTGTaGCTTCGATGGCTCTTGAAACCTGATCTTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLIQTGQQQFEL*LRWLLKPDLLV Trigger: AACCAGAAGATCAGGTTTCAAGAGCCATCGAAGCCACAGTTCAAATTGTTGTTGACCAGTCTGGATAAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | TCTGTCACTTTTCCCACTTTGCAGTCTATAATGATGTaGTCCAAGGCAATGGGTTTTGTCCCAATCCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SVTFPTLQSIMM*SKAMGFVPIPS Trigger: AGATGGGATTGGGACAAAACCCATTGCCTTGGACCACATCATTATAGACTGCAAAGTGGGAAAAGTGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | GCACCTTTGAATGTGCCACGTTTCCAAGGACATACATaGAGAGTATATGGAATTGAGTCGTCAGGTTCTATG | + |
|
Preference number: 6 (lower is better) Translates to: APLNVPRFQGHT*RVYGIESSGSM Trigger: CATAGAACCTGACGACTCAATTCCATATACTCTCCATGTATGTCCTTGGAAACGTGGCACATTCAAAGGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | CTTTGGTGTCAAAACTTTGCTGCATTCCTGTTTTTCTaGGTGAGTGGTTGGCTTCGATTTAAGCCCTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LWCQNFAAFLFF*VSGWLRFKPSG Trigger: ACCAGAGGGCTTAAATCGAAGCCAACCACTCACCAAGAAAAACAGGAATGCAGCAAAGTTTTGACACCAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | TATCTTCTTCTAGAGAAGTGCTGTAGTCAATTGGACTaGGAGGCTCCAATGGAAGGAAATTGGAAGGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: YLLLEKCCSQLD*EAPMEGNWKAR Trigger: CCTTGCCTTCCAATTTCCTTCCATTGGAGCCTCCAAGTCCAATTGACTACAGCACTTCTCTAGAAGAAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | CCTCCTTATCTTCTTCTAGAGAAGTGCTGTAGTCAATaGGACTTGGAGGCTCCAATGGAAGGAAATTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PPYLLLEKCCSQ*DLEAPMEGNWK Trigger: CTTCCAATTTCCTTCCATTGGAGCCTCCAAGTCCAATTGACTACAGCACTTCTCTAGAAGAAGATAAGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | GGCCTGGTCTGCACAGAAATCCACTTTGATGACCATTaGTGTTTTAGCCTTTACTATACCACTACTTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GLVCTEIHFDDH*CFSLYYTTTWR Trigger: TCTCCAAGTAGTGGTATAGTAAAGGCTAAAACATCAATGGTCATCAAAGTGGATTTCTGTGCAGACCAGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | CATTGCAGCTACAGGTGGAAGATCGTCCTTTTTCTCTaGATCTTTAGCCACAAAGTGTCTTGTGGGATTACT | + |
|
Preference number: 6 (lower is better) Translates to: HCSYRWKIVLFL*IFSHKVSCGIT Trigger: AGTAATCCCACAAGACACTTTGTGGCTAAAGATTCAGAGAAAAAGGACGATCTTCCACCTGTAGCTGCAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS GCA 72 bp | AGTCATATGTTGCCACTTCTACCGGAGAAAATGTTATaGCACATTCTGCAGATGTGCCTTCTTCTACCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SHMLPLLPEKML*HILQMCLLLPL Trigger: TAGAGGTAGAAGAAGGCACATCTGCAGAATGTGGCATAACATTTTCTCCGGTAGAAGTGGCAACATATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS GCA 72 bp | CTGGGGAAGTCCAATGATAGGGTACATCCAGTGTATTaGTTGAATTTCTCCATAGCCTACTCCCATATATCT | + |
|
Preference number: 6 (lower is better) Translates to: LGKSNDRVHPVY*LNFSIAYSHIS Trigger: AGATATATGGGAGTAGGCTATGGAGAAATTCAAGCAATACACTGGATGTACCCTATCATTGGACTTCCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | CCAAGCCCAAAACACACCTTTCTTCTTTATAGCCTGTaGTTGCTGGAGAATACCATACAATATAGGTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: PSPKHTFLLYSL*LLENTIQYRSH Trigger: GTGTGACCTATATTGTATGGTATTCTCCAGCAACCACAGGCTATAAAGAAGAAAGGTGTGTTTTGGGCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114021.4 |
||
| CDS CCA 72 bp | AATGCATGTTTCATGACCATGTCTTCCAAGTCCAGATaGATGAAAGTAAACAGAGAGCTCTGTGGTAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: NACFMTMSSKSR*MKVNRELCGRV Trigger: CACTCTACCACAGAGCTCTCTGTTTACTTTCATCCATCTGGACTTGGAAGACATGGTCATGAAACATGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | ACCTTGCAAACTCACTCTTGCCATTTCATTTACAATTaGGGCCTGGTCTGCACAGAAATCCACTTTGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: TLQTHSCHFIYN*GLVCTEIHFDD Trigger: GTCATCAAAGTGGATTTCTGTGCAGACCAGGCCCAAATTGTAAATGAAATGGCAAGAGTGAGTTTGCAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | TCAAGAATGTTTCAGGACAACCTTGCAAACTCACTCTaGCCATTTCATTTACAATTTGGGCCTGGTCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SRMFQDNLANSL*PFHLQFGPGLH Trigger: GTGCAGACCAGGCCCAAATTGTAAATGAAATGGCAAGAGTGAGTTTGCAAGGTTGTCCTGAAACATTCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | GGCACTATTATGGACTTATCTGTCACTTTTCCCACTTaGCAGTCTATAATGATGTGGTCCAAGGCAATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GTIMDLSVTFPT*QSIMMWSKAMG Trigger: ACCCATTGCCTTGGACCACATCATTATAGACTGCAAAGTGGGAAAAGTGACAGATAAGTCCATAATAGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | CTGGCAGAAAATGGGCCACAAATGGCTCATAATACCTaGTCTGACTTGTCAGTCGAAATTCTGTTTCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LAENGPQMAHNT*SDLSVEILFQM Trigger: CATCTGAAACAGAATTTCGACTGACAAGTCAGACAAGGTATTATGAGCCATTTGTGGCCCATTTTCTGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | TTCAACCACACGCACTTTGATGTTCAAGAATGTTTCAGGACAACCTaGCAAACTCACTCTTGCCATTTCATTTACAATTTGGGCCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FNHTHFDVQECFRTT*QTHSCHFIYNLGLV Trigger: GACCAGGCCCAAATTGTAAATGAAATGGCAAGAGTGAGTTTGCAAGGTTGTCCTGAAACATTCTTGAACATCAAAGTGCGTGTGGTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | GCCTCTCATACAAGTAAACACAGAGCATTAGCATCAGCACTGGGTTaGGATCACAGATGTCGATGGCCTGTATGTTTAAATCAAATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: ASHTSKHRALASALG*DHRCRWPVCLNQIQ Trigger: TTGGATTTGATTTAAACATACAGGCCATCGACATCTGTGATCCAAACCCAGTGCTGATGCTAATGCTCTGTGTTTACTTGTATGAGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | ACTATACCACTACTTGGAGAAATGACAATAGGTAACTaGCCCTGGTATTCTGCTTTAAACTTCCCTGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TIPLLGEMTIGN*PWYSALNFPGA Trigger: AGCTCCAGGGAAGTTTAAAGCAGAATACCAGGGTCAGTTACCTATTGTCATTTCTCCAAGTAGTGGTATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | ACTGGTTTCCATCCAAATTGGGCAGGGCAATTGAGATaGTTATATAGCCTAACTGTACCACGAAAACAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TGFHPNWAGQLR*LYSLTVPRKQV Trigger: AACCTGTTTTCGTGGTACAGTTAGGCTATATAATCATCTCAATTGCCCTGCCCAATTTGGATGGAAACCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS GCA 72 bp | TCCCAGCTCTTCTCCAACACAATCATCTTGCATTATTaGCACCCAGTTTATGGATTCAGGGCTATTGTTATA | + |
|
Preference number: 6 (lower is better) Translates to: SQLFSNTIILHY*HPVYGFRAIVI Trigger: TATAACAATAGCCCTGAATCCATAAACTGGGTGGCAATAATGCAAGATGATTGTGTTGGAGAAGAGCTGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS GCA 72 bp | CTACCGGAGAAAATGTTATGCCACATTCTGCAGATGTaGCTTCTTCTACCTCTATTGCATACATATAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LPEKMLCHILQM*LLLPLLHTYKD Trigger: GTCCTTATATGTATGCAATAGAGGTAGAAGAAGGCACATCTGCAGAATGTGGCATAACATTTTCTCCGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | TGGAGAATACCATACAATATAGGTCACACTTTCCAATaGAGCCAATGTCATTTCTACTGGTCCATTAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WRIPYNIGHTFQ*SQCHFYWSIKG Trigger: GCCCTTAATGGACCAGTAGAAATGACATTGGCTCCATTGGAAAGTGTGACCTATATTGTATGGTATTCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | TTCCCAGCTCTTCTCCAACACAATCATCTTGCATTATaGCCACCCAGTTTATGGATTCAGGGCTATTGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: FPALLQHNHLAL*PPSLWIQGYCY Trigger: ATAACAATAGCCCTGAATCCATAAACTGGGTGGCAATAATGCAAGATGATTGTGTTGGAGAAGAGCTGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | TCGTTGACTCATCTTTTAAGCAATGATCATGAAGTTTaGTTGCTGTTGACTGGAGCATTGCAGCTACAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLTHLLSNDHEV*LLLTGALQLQV Trigger: CACCTGTAGCTGCAATGCTCCAGTCAACAGCAACAAAACTTCATGATCATTGCTTAAAAGATGAGTCAACGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | ACAAGTAAACACAGAGCATTAGCATCAGCACTGGGTTaGGATCACAGATGTCGATGGCCTGTATGTTTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: TSKHRALASALG*DHRCRWPVCLN Trigger: ATTTAAACATACAGGCCATCGACATCTGTGATCCAAACCCAGTGCTGATGCTAATGCTCTGTGTTTACTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | AATTTTGACATATTAAAGAGCAAAAGGCACTCAATCTaGGTAAGTCCTAAGAGGGCAACAGCCGCACGAATG | + |
|
Preference number: 6 (lower is better) Translates to: NFDILKSKRHSI*VSPKRATAARM Trigger: CATTCGTGCGGCTGTTGCCCTCTTAGGACTTACCAAGATTGAGTGCCTTTTGCTCTTTAATATGTCAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | CATTCTCATGGAGGAAGGTCTTCCAGCACTGGTCAATaGCAAGACCCTTGGGTTGTTCTTTATTTGTTAATA | + |
|
Preference number: 6 (lower is better) Translates to: HSHGGRSSSTGQ*QDPWVVLYLLI Trigger: TATTAACAAATAAAGAACAACCCAAGGGTCTTGCAATTGACCAGTGCTGGAAGACCTTCCTCCATGAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | GGCATGCAGTCATATATCTTGCTAGTAGCATCAACTTaGGCTGTTACATGTGTCAGTGATTTCGATGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GMQSYILLVAST*AVTCVSDFDDG Trigger: TCCATCATCGAAATCACTGACACATGTAACAGCCAAAGTTGATGCTACTAGCAAGATATATGACTGCATGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | ATGAATTTGCTTTGGTGTCAAAACTTTGCTGCATTCCTGTTTTTCTaGGTGAGTGGTTGGCTTCGATTTAAGCCCTCTGGTGATCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: MNLLWCQNFAAFLFF*VSGWLRFKPSGDLS Trigger: AGAAAGATCACCAGAGGGCTTAAATCGAAGCCAACCACTCACCAAGAAAAACAGGAATGCAGCAAAGTTTTGACACCAAAGCAAATTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | TACAATCCAAGCCCAAAACACACCTTTCTTCTTTATAGCCTGTGGTaGCTGGAGAATACCATACAATATAGGTCACACTTTCCAATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: YNPSPKHTFLLYSLW*LENTIQYRSHFPME Trigger: CTCCATTGGAAAGTGTGACCTATATTGTATGGTATTCTCCAGCAACCACAGGCTATAAAGAAGAAAGGTGTGTTTTGGGCTTGGATTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114021.4 |
||
| CDS CAA 90 bp | GCCATTTCATTTACAATTTGGGCCTGGTCTGCACAGAAATCCACTTaGATGACCATTGATGTTTTAGCCTTTACTATACCACTACTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: AISFTIWAWSAQKST*MTIDVLAFTIPLLG Trigger: TCCAAGTAGTGGTATAGTAAAGGCTAAAACATCAATGGTCATCAAAGTGGATTTCTGTGCAGACCAGGCCCAAATTGTAAATGAAATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | GAATATTTGTTCCCAGCTCTTCTCCAACACAATCATCTTGCATTATaGCCACCCAGTTTATGGATTCAGGGCTATTGTTATACAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EYLFPALLQHNHLAL*PPSLWIQGYCYTEE Trigger: CTCTTCTGTATAACAATAGCCCTGAATCCATAAACTGGGTGGCAATAATGCAAGATGATTGTGTTGGAGAAGAGCTGGGAACAAATATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | AATGTGCCAAAATCAACTACTGGTACAATTTCCAGCTaGCAGACTGGAATCAGCCCAAATAGAGGAATATCT | + |
|
Preference number: 6 (lower is better) Translates to: NVPKSTTGTISS*QTGISPNRGIS Trigger: AGATATTCCTCTATTTGGGCTGATTCCAGTCTGTCAGCTGGAAATTGTACCAGTAGTTGATTTTGGCACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | TCTACAGGAGGTCCAGGAGAACTACGGATTTCAAGATaGTACCAGATTTTTAGAGCTTTAACCTTTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: STGGPGELRISR*YQIFRALTFSS Trigger: AGAGGAAAAGGTTAAAGCTCTAAAAATCTGGTATCATCTTGAAATCCGTAGTTCTCCTGGACCTCCTGTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | GGAATTTCAATGCATGTTGTCTCCAGGGCAATACAATaGAGTTCAATTATATCTACAGGAGGTCCAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GISMHVVSRAIQ*SSIISTGGPGE Trigger: TTCTCCTGGACCTCCTGTAGATATAATTGAACTTCATTGTATTGCCCTGGAGACAACATGCATTGAAATTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
||
| CDS GCA 72 bp | TATAAAATAAGTCTCAATCAAAAATGGGCAGTATGCTaGCAGCTGTGTAGCAAACACAAGGCCATCAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: YKISLNQKWAVC*QLCSKHKAIKK Trigger: CTTCTTGATGGCCTTGTGTTTGCTACACAGCTGGCAGCATACTGCCCATTTTTGATTGAGACTTATTTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
||
| CDS GCA 72 bp | GGAATTAATAAGGACCGGAAAGCTAAAGTCATATGTTaGCACTTCTACCGGAGAAAATGTTATGCCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: GINKDRKAKVIC*HFYRRKCYATF Trigger: GAATGTGGCATAACATTTTCTCCGGTAGAAGTGGCAACATATGACTTTAGCTTTCCGGTCCTTATTAATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS CAA 72 bp | TTGACTCATCTTTTAAGCAATGATCATGAAGTTTTGTaGCTGTTGACTGGAGCATTGCAGCTACAGGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LTHLLSNDHEVL*LLTGALQLQVE Trigger: TTCCACCTGTAGCTGCAATGCTCCAGTCAACAGCAACAAAACTTCATGATCATTGCTTAAAAGATGAGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | TCATCTCTGCTCTTAACGAAAAACATAATTGCACCTTaGAATGTGCCACGTTTCCAAGGACATACATGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSLLLTKNIIAP*NVPRFQGHTWR Trigger: TCTCCATGTATGTCCTTGGAAACGTGGCACATTCAAAGGTGCAATTATGTTTTTCGTTAAGAGCAGAGATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | AGCCCAAAACACACCTTTCTTCTTTATAGCCTGTGGTaGCTGGAGAATACCATACAATATAGGTCACACTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPKHTFLLYSLW*LENTIQYRSHF Trigger: AAAGTGTGACCTATATTGTATGGTATTCTCCAGCAACCACAGGCTATAAAGAAGAAAGGTGTGTTTTGGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114021.4 |
||
| CDS CAA 72 bp | AGGAAGGTCTTCCAGCACTGGTCAATTGCAAGACCCTaGGGTTGTTCTTTATTTGTTAATATGAGATCAACA | + |
|
Preference number: 6 (lower is better) Translates to: RKVFQHWSIARP*GCSLFVNMRST Trigger: TGTTGATCTCATATTAACAAATAAAGAACAACCCAAGGGTCTTGCAATTGACCAGTGCTGGAAGACCTTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | CAATCATCTTGCATTATTGCCACCCAGTTTATGGATTCAGGGCTATaGTTATACAGAAGAGCATGTTCAAGTTTTGATGTTCCGAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QSSCIIATQFMDSGL*LYRRACSSFDVPKN Trigger: GTTCTTCGGAACATCAAAACTTGAACATGCTCTTCTGTATAACAATAGCCCTGAATCCATAAACTGGGTGGCAATAATGCAAGATGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | GGAAGTCCAGAGCCTGTCAGAGCTAATTCCACTTTTTaGAGTCGATTACTTTTCATGGTATTAGAGTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: GSPEPVRANSTF*SRLLFMVLELS Trigger: TGATAACTCTAATACCATGAAAAGTAATCGACTTCAAAAAGTGGAATTAGCTCTGACAGGCTCTGGACTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | CTGGAATCTGAGGGATGTAAATTTTCCTGGGTATATTaGAATGTGCAGGAAGGCTCAGTTCTGTTGTATATA | + |
|
Preference number: 6 (lower is better) Translates to: LESEGCKFSWVY*NVQEGSVLLYI Trigger: TATATACAACAGAACTGAGCCTTCCTGCACATTTCAATATACCCAGGAAAATTTACATCCCTCAGATTCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS GCA 72 bp | TCTCTTTACAATGCACTTTACTATTGGCAACCAATGTaGCAAAATCAACTACTGGTACAATTTCCAGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLYNALYYWQPM*QNQLLVQFPAD Trigger: GTCAGCTGGAAATTGTACCAGTAGTTGATTTTGGCACATTGGTTGCCAATAGTAAAGTGCATTGTAAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS GCA 72 bp | ATTTATAAAATAAGTCTCAATCAAAAATGGGCAGTATaGTGCCAGCTGTGTAGCAAACACAAGGCCATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: IYKISLNQKWAV*CQLCSKHKAIK Trigger: CTTGATGGCCTTGTGTTTGCTACACAGCTGGCAGCATACTGCCCATTTTTGATTGAGACTTATTTTATAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
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| CDS GCA 72 bp | TTCGACAGATCCACCAATCCTAAGATCTATGACATTTaGATGGTGAATAGCAACCTTTGCTCTTGTATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: FDRSTNPKIYDI*MVNSNLCSCIK Trigger: TTTGATACAAGAGCAAAGGTTGCTATTCACCATGCAAATGTCATAGATCTTAGGATTGGTGGATCTGTCGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | CAACACAATCATCTTGCATTATTGCCACCCAGTTTATaGATTCAGGGCTATTGTTATACAGAAGAGCATGTT | + |
|
Preference number: 6 (lower is better) Translates to: QHNHLALLPPSL*IQGYCYTEEHV Trigger: AACATGCTCTTCTGTATAACAATAGCCCTGAATCCATAAACTGGGTGGCAATAATGCAAGATGATTGTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS CCA 72 bp | ACAAATAGTAAATGCAATTCCTCTCAATGTAGTTACTaGTTTCCATCCAAATTGGGCAGGGCAATTGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: TNSKCNSSQCSY*FPSKLGRAIEM Trigger: CATCTCAATTGCCCTGCCCAATTTGGATGGAAACCAGTAACTACATTGAGAGGAATTGCATTTACTATTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CCA 72 bp | TCACATTCCAAAATCGGTTTGAATGTCAAAGGATACTaGATAGTTTCACCAGGGCCAACATGTAAAATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SHSKIGLNVKGY*IVSPGPTCKIG Trigger: TCCAATTTTACATGTTGGCCCTGGTGAAACTATCCAGTATCCTTTGACATTCAAACCGATTTTGGAATGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
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| CDS CAA 72 bp | CAGGGCTATTGTTATACAGAAGAGCATGTTCAAGTTTaGATGTTCCGAAGAACACAGAACCAAATCGTATAC | + |
|
Preference number: 6 (lower is better) Translates to: QGYCYTEEHVQV*MFRRTQNQIVY Trigger: GTATACGATTTGGTTCTGTGTTCTTCGGAACATCAAAACTTGAACATGCTCTTCTGTATAACAATAGCCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS CAA 72 bp | CTCTGCAGACATTCTGACTCTCTAGATGCTATTTTCTaGGTGCTTAACAATCTGTTAGCTTTGAGAGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LCRHSDSLDAIF*VLNNLLALREE Trigger: TTCTTCTCTCAAAGCTAACAGATTGTTAAGCACCAAGAAAATAGCATCTAGAGAGTCAGAATGTCTGCAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS CAA 72 bp | AAGGCTTTGATCACAAACCTTGAAATAAGCATGGTTTaGCCCTATATTGTGAAGTATGGCTTTCCTCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: KALITNLEISMV*PYIVKYGFPPS Trigger: ACTTGGAGGAAAGCCATACTTCACAATATAGGGCAAAACCATGCTTATTTCAAGGTTTGTGATCAAAGCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | CATGCATGTCAAAGGGAAGATAGTAGACATCTATACTaGAAGATGTTTTTGGTCTCAGGGAAAGTGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HACQREDSRHLY*KMFLVSGKVLL Trigger: CAACAACACTTTCCCTGAGACCAAAAACATCTTCAAGTATAGATGTCTACTATCTTCCCTTTGACATGCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | AATAGCGAACATGCATGTCAAAGGGAAGATAGTAGACATCTATACTaGAAGATGTTTTTGGTCTCAGGGAAAGTGTTGTTGATGAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: NSEHACQREDSRHLY*KMFLVSGKVLLMNR Trigger: TCTGTTCATCAACAACACTTTCCCTGAGACCAAAAACATCTTCAAGTATAGATGTCTACTATCTTCCCTTTGACATGCATGTTCGCTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | TACTGCTGTGCTTCGAAGTTTAGCATTTTCACGAATAAAATTACGTaGAATTGGTGGCATGCAGTCATATATCTTGCTAGTAGCATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: YCCASKFSIFTNKIT*NWWHAVIYLASSIN Trigger: GTTGATGCTACTAGCAAGATATATGACTGCATGCCACCAATTCAACGTAATTTTATTCGTGAAAATGCTAAACTTCGAAGCACAGCAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | AGGGCTATTGTTATACAGAAGAGCATGTTCAAGTTTTaGTGTTCCGAAGAACACAGAACCAAATCGTATACA | + |
|
Preference number: 6 (lower is better) Translates to: RAIVIQKSMFKF*CSEEHRTKSYT Trigger: TGTATACGATTTGGTTCTGTGTTCTTCGGAACATCAAAACTTGAACATGCTCTTCTGTATAACAATAGCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | AACAGTATTCTTGGCTCTAAAAAGGTGACTTTAGTGTaGCCAACATGTGCAATACACTTCAGTGTCAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: NSILGSKKVTLV*PTCAIHFSVKV Trigger: TACTTTGACACTGAAGTGTATTGCACATGTTGGTCACACTAAAGTCACCTTTTTAGAGCCAAGAATACTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS TCA 72 bp | CTGGTAGGATTTCTGAAATGTACCATGACAGATGCCTaGAGACCAAGAATAGTTGTTACTCTTTTCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVGFLKCTMTDA*RPRIVVTLFNS Trigger: AGAATTGAAAAGAGTAACAACTATTCTTGGTCTTCAGGCATCTGTCATGGTACATTTCAGAAATCCTACCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | ACGCACTTTGATGTTCAAGAATGTTTCAGGACAACCTaGCAAACTCACTCTTGCCATTTCATTTACAATTTG | + |
|
Preference number: 6 (lower is better) Translates to: THFDVQECFRTT*QTHSCHFIYNL Trigger: CAAATTGTAAATGAAATGGCAAGAGTGAGTTTGCAAGGTTGTCCTGAAACATTCTTGAACATCAAAGTGCGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | TGCATTATTGCCACCCAGTTTATGGATTCAGGGCTATaGTTATACAGAAGAGCATGTTCAAGTTTTGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: CIIATQFMDSGL*LYRRACSSFDV Trigger: AACATCAAAACTTGAACATGCTCTTCTGTATAACAATAGCCCTGAATCCATAAACTGGGTGGCAATAATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | GATGCTATTTTCTTGGTGCTTAACAATCTGTTAGCTTaGAGAGAAGAAGCTTTTAAGGATGGAGGTATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DAIFLVLNNLLA*REEAFKDGGIS Trigger: GGAAATACCTCCATCCTTAAAAGCTTCTTCTCTCAAAGCTAACAGATTGTTAAGCACCAAGAAAATAGCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | GTAAGTTTACCCATAATTTCACATTCCAAAATCGGTTaGAATGTCAAAGGATACTGGATAGTTTCACCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSLPIISHSKIG*NVKGYWIVSPG Trigger: CCCTGGTGAAACTATCCAGTATCCTTTGACATTCAAACCGATTTTGGAATGTGAAATTATGGGTAAACTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
||
| CDS CAA 72 bp | GACTTACAAATTTCACAACAAGCACAATGTGATTTTTaGGGCCAATTGTTACAACATTCCCTGTCTGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: DLQISQQAQCDF*GQLLQHSLSVQ Trigger: TTGCACAGACAGGGAATGTTGTAACAATTGGCCCAAAAAATCACATTGTGCTTGTTGTGAAATTTGTAAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | TTGCCACGGTTAATAATAGTAATCTCTTTACAATGCACTTTACTATaGGCAACCAATGTGCCAAAATCAACTACTGGTACAATTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LPRLIIVISLQCTLL*ATNVPKSTTGTISS Trigger: GCTGGAAATTGTACCAGTAGTTGATTTTGGCACATTGGTTGCCAATAGTAAAGTGCATTGTAAAGAGATTACTATTATTAACCGTGGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | GGTCCATATCAAGGATTTGATGGGGTTTACAATTCAAATAAAGAATaGGATCCTCCTTATCTTCTTCTAGAGAAGTGCTGTAGTCAATTG | + |
|
Preference number: 6 (lower is better) Translates to: GPYQGFDGVYNSNKE*DPPYLLLEKCCSQL Trigger: CAATTGACTACAGCACTTCTCTAGAAGAAGATAAGGAGGATCCAATTCTTTATTTGAATTGTAAACCCCATCAAATCCTTGATATGGACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | TTATGGATTCAGGGCTATTGTTATACAGAAGAGCATGTTCAAGTTTaGATGTTCCGAAGAACACAGAACCAAATCGTATACATTCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: LWIQGYCYTEEHVQV*MFRRTQNQIVYIPI Trigger: AATTGGAATGTATACGATTTGGTTCTGTGTTCTTCGGAACATCAAAACTTGAACATGCTCTTCTGTATAACAATAGCCCTGAATCCATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | CTTCATTTACTATACCTTCAAGTAAATACACACGTACATCATGTCTaGATAACAACAAAAGTTTACAAGGGTATCTTCCAGATCCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LHLLYLQVNTHVHHV*ITTKVYKGIFQIQG Trigger: CCCTTGGATCTGGAAGATACCCTTGTAAACTTTTGTTGTTATCAAGACATGATGTACGTGTGTATTTACTTGAAGGTATAGTAAATGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | TTTTGTAAAGTAAGTTTACCCATAATTTCACATTCCAAAATCGGTTaGAATGTCAAAGGATACTGGATAGTTTCACCAGGGCCAACATGT | + |
|
Preference number: 6 (lower is better) Translates to: FCKVSLPIISHSKIG*NVKGYWIVSPGPTC Trigger: ACATGTTGGCCCTGGTGAAACTATCCAGTATCCTTTGACATTCAAACCGATTTTGGAATGTGAAATTATGGGTAAACTTACTTTACAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114021.4 ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | ATCCCAACAAATAGGTTCCCACATATAACTTCAGCATCATTAAACTaGGGAACAAGAGATCCTCTTTTCATTTTCTGTGAAGCAAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: IPTNRFPHITSASLN*GTRDPLFIFCEAND Trigger: ATCATTTGCTTCACAGAAAATGAAAAGAGGATCTCTTGTTCCCAAGTTTAATGATGCTGAAGTTATATGTGGGAACCTATTTGTTGGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
||
| CDS CAA 90 bp | GTGTACTTTTCATTTGGTTTCAGGCTTCCAATCAGTGCAGTAAATTaGAATATGCCGCTTTTGAAATATTTGTCAATTCTGCCAATATCC | + |
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Preference number: 6 (lower is better) Translates to: VYFSFGFRLPISAVN*NMPLLKYLSILPIS Trigger: GGATATTGGCAGAATTGACAAATATTTCAAAAGCGGCATATTCAAATTTACTGCACTGATTGGAAGCCTGAAACCAAATGAAAAGTACAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS GCA 72 bp | GCTTTGCCACGGTTAATAATAGTAATCTCTTTACAATaGACTTTACTATTGGCAACCAATGTGCCAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: ALPRLIIVISLQ*TLLLATNVPKS Trigger: TGATTTTGGCACATTGGTTGCCAATAGTAAAGTGCATTGTAAAGAGATTACTATTATTAACCGTGGCAAAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS CCA 72 bp | AATTCTGTTTCAGATGTCTTGAATAAACCTATTCCATaGATGTTAATAACATCCTCTACTTCGGGCTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: NSVSDVLNKPIP*MLITSSTSGSV Trigger: TACTGAGCCCGAAGTAGAGGATGTTATTAACATCCATGGAATAGGTTTATTCAAGACATCTGAAACAGAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS TCA 72 bp | TTTACAATACAAAGAATATCTGAATGTTCACCCATGTaGCAAGGTGCAAAAGTAAGTGATTTTCCTGGATCA | + |
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Preference number: 6 (lower is better) Translates to: FTIQRISECSPM*QGAKVSDFPGS Trigger: TGATCCAGGAAAATCACTTACTTTTGCACCTTGTCACATGGGTGAACATTCAGATATTCTTTGTATTGTAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101410.3 ENSMUST00000197180.6 |
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| CDS TCA 72 bp | AAGAAGCTTTGCAGTGGGAATCTTGAAGTGAAGAGTTaGATTACTGAAATAGTTTTGTGGCAAAATTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: KKLCSGNLEVKS*ITEIVLWQNSD Trigger: ATCAGAATTTTGCCACAAAACTATTTCAGTAATTCAACTCTTCACTTCAAGATTCCCACTGCAAAGCTTCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS TCA 72 bp | AAAGTTTCATGCGTAGGATTATATAAAGGAAGGGTTTaGATGATCTTCTTTCCAAGATCACACTGCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: KVSCVGLYKGRV*MIFFPRSHCIS Trigger: AGAAATGCAGTGTGATCTTGGAAAGAAGATCATTCAAACCCTTCCTTTATATAATCCTACGCATGAAACTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS CCA 72 bp | TTTAGCATTTTCACGAATAAAATTACGTTGAATTGGTaGCATGCAGTCATATATCTTGCTAGTAGCATCAAC | + |
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Preference number: 6 (lower is better) Translates to: FSIFTNKITLNW*HAVIYLASSIN Trigger: GTTGATGCTACTAGCAAGATATATGACTGCATGCCACCAATTCAACGTAATTTTATTCGTGAAAATGCTAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS CCA 72 bp | AAGTTTAGCATTTTCACGAATAAAATTACGTTGAATTaGTGGCATGCAGTCATATATCTTGCTAGTAGCATC | + |
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Preference number: 6 (lower is better) Translates to: KFSIFTNKITLN*WHAVIYLASSI Trigger: GATGCTACTAGCAAGATATATGACTGCATGCCACCAATTCAACGTAATTTTATTCGTGAAAATGCTAAACTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197180.6 |
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| CDS CAA 72 bp | GCAGTTTTCCACTCAAGTGAAGTATCACGTCATAAATaGTCTTATTATATTTGGAAAAATCAGACTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: AVFHSSEVSRHK*SYYIWKNQTVW Trigger: CCAGACAGTCTGATTTTTCCAAATATAATAAGACAATTTATGACGTGATACTTCACTTGAGTGGAAAACTGC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179788.2 ENSMUST00000197180.6 |
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