RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP46 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049571

Ensembl transcript IDs: ENSMUST00000129990.9, ENSMUST00000130453.8, ENSMUST00000140820.8, ENSMUST00000155075.8, ENSMUST00000196540.5

Found 666 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTGCTGCAGTAGCTGCTTGGCCTTCACCCAGGTGGCAATGAGGTaGTGCCGGACATTGGTGGGCACGATGTCCTCCGGCACGTTCCCG +
Preference number: 1 (lower is better)
Translates to: CCCSSCLAFTQVAMR*CRTLVGTMSSGTFP
Trigger: CGGGAACGTGCCGGAGGACATCGTGCCCACCAATGTCCGGCAGCACCTCATTGCCACCTGGGTGAAGGCCAAGCAGCTACTGCAGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 90 bp CAATCTGCTGCTGCAGTAGCTGCTTGGCCTTCACCCAGGTGGCAATaGGGTGCTGCCGGACATTGGTGGGCACGATGTCCTCCGGCACGT +
Preference number: 1 (lower is better)
Translates to: QSAAAVAAWPSPRWQ*GAAGHWWARCPPAR
Trigger: ACGTGCCGGAGGACATCGTGCCCACCAATGTCCGGCAGCACCTCATTGCCACCTGGGTGAAGGCCAAGCAGCTACTGCAGCAGCAGATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 90 bp TGCTGCAGTAGCTGCTTGGCCTTCACCCAGGTGGCAATGAGGTGCTaGCGGACATTGGTGGGCACGATGTCCTCCGGCACGTTCCCGTTA +
Preference number: 1 (lower is better)
Translates to: CCSSCLAFTQVAMRC*RTLVGTMSSGTFPL
Trigger: TAACGGGAACGTGCCGGAGGACATCGTGCCCACCAATGTCCGGCAGCACCTCATTGCCACCTGGGTGAAGGCCAAGCAGCTACTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 90 bp GTTCCAGTAGTGCCGGGCGGCCATCATCACCAGGGAATTGCTGTTTaGCAGGCCCCCAAACCTGGCACTTTCTACAAAGGCCTTGGCTGC +
Preference number: 1 (lower is better)
Translates to: VPVVPGGHHHQGIAV*QAPKPGTFYKGLGC
Trigger: GCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATGGCCGCCCGGCACTACTGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 90 bp CAGGCACGTAGCCGGCTGGGTGTTGGCTCAAGTCCTCAGGAGGAATaGCCTGGTTGTTCAGCTGTACACCTTCTGAGCGCAGAAGGTGGA +
Preference number: 1 (lower is better)
Translates to: QARSRLGVGSSPQEE*PGCSAVHLLSAEGG
Trigger: TCCACCTTCTGCGCTCAGAAGGTGTACAGCTGAACAACCAGGCCATTCCTCCTGAGGACTTGAGCCAACACCCAGCCGGCTACGTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR TCA 90 bp ACTGGTCCAAGGAGGCCGTCTGATTTGAAGGCACTGTACTCTCTGTaGGAGACTGGGCAGGGGAGGCCTGCCCTTCCTTCTTGGGTTCTG +
Preference number: 1 (lower is better)
Translates to: TGPRRPSDLKALYSL*ETGQGRPALPSWVL
Trigger: CAGAACCCAAGAAGGAAGGGCAGGCCTCCCCTGCCCAGTCTCTCACAGAGAGTACAGTGCCTTCAAATCAGACGGCCTCCTTGGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 90 bp GCCATGTGTTCCAGTAGTGCCGGGCGGCCATCATCACCAGGGAATTaGTGTTTGCCAGGCCCCCAAACCTGGCACTTTCTACAAAGGCCT +
Preference number: 1 (lower is better)
Translates to: AMCSSSAGRPSSPGN*CLPGPQTWHFLQRP
Trigger: AGGCCTTTGTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATGGCCGCCCGGCACTACTGGAACACATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 90 bp GTAGGCCATCAAGCAGTCATCTTCATAGGAAGAGGCACTTGGGGATaGCATCAAAGCCCGCAGGATGTGCACACGGGCCAGGGCCTCCAA +
Preference number: 1 (lower is better)
Translates to: VGHQAVIFIGRGTWG*HQSPQDVHTGQGLQ
Trigger: TTGGAGGCCCTGGCCCGTGTGCACATCCTGCGGGCTTTGATGGCATCCCCAAGTGCCTCTTCCTATGAAGATGACTGCTTGATGGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 90 bp CCTGGTTGTTCAGCTGTACACCTTCTGAGCGCAGAAGGTGGACAGTaGCTTCTGCGGGAGGGCAGAGCAGTCTCCATATTCTCCTCTGGC +
Preference number: 1 (lower is better)
Translates to: PGCSAVHLLSAEGGQ*LLREGRAVSIFSSG
Trigger: GCCAGAGGAGAATATGGAGACTGCTCTGCCCTCCCGCAGAAGCCACTGTCCACCTTCTGCGCTCAGAAGGTGTACAGCTGAACAACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CCA 90 bp CGGCCATCATCACCAGGGAATTGCTGTTTGCCAGGCCCCCAAACCTaGCACTTTCTACAAAGGCCTTGGCTGCTGCTAGCCGTAGCTGCT +
Preference number: 1 (lower is better)
Translates to: RPSSPGNCCLPGPQT*HFLQRPWLLLAVAA
Trigger: AGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 90 bp GAAGCTGTAGGCCATCAAGCAGTCATCTTCATAGGAAGAGGCACTTaGGGATGCCATCAAAGCCCGCAGGATGTGCACACGGGCCAGGGC +
Preference number: 1 (lower is better)
Translates to: EAVGHQAVIFIGRGT*GCHQSPQDVHTGQG
Trigger: GCCCTGGCCCGTGTGCACATCCTGCGGGCTTTGATGGCATCCCCAAGTGCCTCTTCCTATGAAGATGACTGCTTGATGGCCTACAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 90 bp GAGCTGATGTCTTCATTGGTACTCTGCTCATCGGTGCCTAGCCGCTaGCCAATCTGCTGCTGCAGTAGCTGCTTGGCCTTCACCCAGGTG +
Preference number: 1 (lower is better)
Translates to: ELMSSLVLCSSVPSR*PICCCSSCLAFTQV
Trigger: CACCTGGGTGAAGGCCAAGCAGCTACTGCAGCAGCAGATTGGTCAGCGGCTAGGCACCGATGAGCAGAGTACCAATGAAGACATCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 90 bp TTTGAAGGCACTGTACTCTCTGTGAGAGACTGGGCAGGGGAGGCCTaGCCTTCCTTCTTGGGTTCTGGCTCAAGGGCGTCTTCATTGGGT +
Preference number: 1 (lower is better)
Translates to: FEGTVLSVRDWAGEA*PSFLGSGSRASSLG
Trigger: ACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAGGGCAGGCCTCCCCTGCCCAGTCTCTCACAGAGAGTACAGTGCCTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 90 bp GGAATGGCCTGGTTGTTCAGCTGTACACCTTCTGAGCGCAGAAGGTaGACAGTGGCTTCTGCGGGAGGGCAGAGCAGTCTCCATATTCTC +
Preference number: 1 (lower is better)
Translates to: GMAWLFSCTPSERRR*TVASAGGQSSLHIL
Trigger: GAGAATATGGAGACTGCTCTGCCCTCCCGCAGAAGCCACTGTCCACCTTCTGCGCTCAGAAGGTGTACAGCTGAACAACCAGGCCATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CCA 90 bp TGTGAGAGACTGGGCAGGGGAGGCCTGCCCTTCCTTCTTGGGTTCTaGCTCAAGGGCGTCTTCATTGGGTTTCATGGAGAGCAGAATCTC +
Preference number: 1 (lower is better)
Translates to: CERLGRGGLPFLLGF*LKGVFIGFHGEQNL
Trigger: GAGATTCTGCTCTCCATGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAGGGCAGGCCTCCCCTGCCCAGTCTCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 90 bp GTGGCTTCACAAAGACTCCAGGGTTTAGCTCACACGATGGCTTGGTaGGGCAGACCATACAGAACCCAGTTGAGGGCAGTGGTGAGTGAC +
Preference number: 1 (lower is better)
Translates to: VASQRLQGLAHTMAW*GRPYRTQLRAVVSD
Trigger: GTCACTCACCACTGCCCTCAACTGGGTTCTGTATGGTCTGCCTCACCAAGCCATCGTGTGAGCTAAACCCTGGAGTCTTTGTGAAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
3UTR CCA 90 bp TGCTGTTTGCCAGGCCCCCAAACCTGGCACTTTCTACAAAGGCCTTaGCTGCTGCTAGCCGTAGCTGCTTCCTGCCTTTCAAGTTTTCCA +
Preference number: 1 (lower is better)
Translates to: CCLPGPQTWHFLQRP*LLLAVAASCLSSFP
Trigger: TGGAAAACTTGAAAGGCAGGAAGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 90 bp ATTTCAGGGCCTGTCCCTCCAGTCTGGAAGTCAGCTGACGGCCACTaGTGCAGAGGCAGGGTTTTATCTGTCTCCTGCTTCTTGTTCTCT +
Preference number: 1 (lower is better)
Translates to: ISGPVPPVWKSADGH*CRGRVLSVSCFLFS
Trigger: AGAGAACAAGAAGCAGGAGACAGATAAAACCCTGCCTCTGCACCAGTGGCCGTCAGCTGACTTCCAGACTGGAGGGACAGGCCCTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 90 bp AGGCCTGCCCTTCCTTCTTGGGTTCTGGCTCAAGGGCGTCTTCATTaGGTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGT +
Preference number: 1 (lower is better)
Translates to: RPALPSWVLAQGRLH*VSWRAESRLPNPGG
Trigger: ACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAGGGCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 90 bp GTGACTCCGGGTGGTGAGGCTGCAACTCAGAGAGTGGCTCATTCTTaGAGACCTGGGGTTTCTCGTCTTGGCTACCTGGTTCATTGCATA +
Preference number: 1 (lower is better)
Translates to: VTPGGEAATQRVAHS*RPGVSRLGYLVHCI
Trigger: TATGCAATGAACCAGGTAGCCAAGACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCTCTGAGTTGCAGCCTCACCACCCGGAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
3UTR TCA 90 bp TGGCTGCTGCTAGCCGTAGCTGCTTCCTGCCTTTCAAGTTTTCCATaGTGCTACGGCCCTGGATGCAGGACACCATACACAGCATTTCTG +
Preference number: 1 (lower is better)
Translates to: WLLLAVAASCLSSFP*CYGPGCRTPYTAFL
Trigger: CAGAAATGCTGTGTATGGTGTCCTGCATCCAGGGCCGTAGCATCATGGAAAACTTGAAAGGCAGGAAGCAGCTACGGCTAGCAGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 90 bp AACCTGGCACTTTCTACAAAGGCCTTGGCTGCTGCTAGCCGTAGCTaGTTCCTGCCTTTCAAGTTTTCCATGATGCTACGGCCCTGGATG +
Preference number: 1 (lower is better)
Translates to: NLALSTKALAAASRS*FLPFKFSMMLRPWM
Trigger: CATCCAGGGCCGTAGCATCATGGAAAACTTGAAAGGCAGGAAGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 90 bp TCCTGCTTCTTGTTCTCTGTCTTGTTGATGATGCTGATGATTCTCTaGAGGGATGCCTTGGCCTTCTTCCTGTTGGCCGGTGAGGACAGA +
Preference number: 1 (lower is better)
Translates to: SCFLFSVLLMMLMIL*RDALAFFLLAGEDR
Trigger: TCTGTCCTCACCGGCCAACAGGAAGAAGGCCAAGGCATCCCTCCAGAGAATCATCAGCATCATCAACAAGACAGAGAACAAGAAGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 90 bp CTTCCTTCTTGGGTTCTGGCTCAAGGGCGTCTTCATTGGGTTTCATaGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGTCAAACACGT +
Preference number: 1 (lower is better)
Translates to: LPSWVLAQGRLHWVS*RAESRLPNPGGQTR
Trigger: ACGTGTTTGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 90 bp ACAGCTGCTCTGATATCTGATAGAGTCGAAGACTCCAGTGGACCATaGACCAAGGTAGGGCGCACGTTCTTCTTCGACTTTTCAGGTGTC +
Preference number: 1 (lower is better)
Translates to: TAALISDRVEDSSGP*TKVGRTFFFDFSGV
Trigger: GACACCTGAAAAGTCGAAGAAGAACGTGCGCCCTACCTTGGTTCATGGTCCACTGGAGTCTTCGACTCTATCAGATATCAGAGCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 90 bp TGTTCATGGCATACTGTGACAAGTTTTCTATCCAGGTTCTGTACGTaGTCCACTCTGAATTGCTCTCTGGTGGTTCAGGCACGTAGCCGG +
Preference number: 1 (lower is better)
Translates to: CSWHTVTSFLSRFCT*STLNCSLVVQARSR
Trigger: CCGGCTACGTGCCTGAACCACCAGAGAGCAATTCAGAGTGGATCACGTACAGAACCTGGATAGAAAACTTGTCACAGTATGCCATGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR TCA 90 bp GAATTAGTTTTACTCCTTCTGTCAAGGAAATCTGCAAGATGTGCTTaGAGAAGCTGTAGGCCATCAAGCAGTCATCTTCATAGGAAGAGG +
Preference number: 1 (lower is better)
Translates to: ELVLLLLSRKSARCA*RSCRPSSSHLHRKR
Trigger: CCTCTTCCTATGAAGATGACTGCTTGATGGCCTACAGCTTCTTCAAGCACATCTTGCAGATTTCCTTGACAGAAGGAGTAAAACTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp GAAGAGCAGAGTGTAGAGTGCAGCGCGGAGTGTGAGGTCGTCCTCGGCCCCTGGTGGGAATCCAGCTCATaGTCAGGCCTCGAGCAAGGG +
Preference number: 2 (lower is better)
Translates to: EEQSVECSAECEVVLGPWWESSS*SGLEQG
Trigger: CCCTTGCTCGAGGCCTGATCATGAGCTGGATTCCCA...CCAGGGGCCGAGGACGACCTCACACTCCGCGCTGCACTCTACACTCTGCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp AAGAGGCGGTGGGCTGTCCTCGGCAGCACTTGCACAGCCTCGTCCAGCACCTTATCGGTGCCTAGCCGCTaGCCAATCTGCTGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: KRRWAVLGSTCTASSSTLSVPSR*PICCCS
Trigger: ACTGCAGCAGCAGATTGGTCAGCGGCTAGGCACCGA...TAAGGTGCTGGACGAGGCTGTGCAAGTGCTGCCGAGGACAGCCCACCGCCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CCA 90 bp AAGAGGCGGTGGGCTGTCCTCGGCAGCACTTGCACAGCCTCGTCCAGCACCTTAAGGCACGTAGCCGGCTaGGTGTTGGCTCAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: KRRWAVLGSTCTASSSTLRHVAG*VLAQVL
Trigger: GAGGACTTGAGCCAACACCCAGCCGGCTACGTGCCT...TAAGGTGCTGGACGAGGCTGTGCAAGTGCTGCCGAGGACAGCCCACCGCCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CAA 90 bp AGCTGCTTGGCCTTCACCCAGGTGGCAATGAGGTGCTGCCGGACATaGGTGGGCACGATGTCCTCCGGCACGTTCCCGTTAGTGAGGTTC +
Preference number: 2 (lower is better)
Translates to: SCLAFTQVAMRCCRT*VGTMSSGTFPLVRF
Trigger: GAACCTCACTAACGGGAACGTGCCGGAGGACATCGTGCCCACCAATGTCCGGCAGCACCTCATTGCCACCTGGGTGAAGGCCAAGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp GAAGAGGCACTTGGGGATGCCATCAAAGCCCGCAGGATGTGCACACGGGCCAGGGGTCGGCGTGGCTGTTaGAGAGCAGAGTGTAGAGTG +
Preference number: 2 (lower is better)
Translates to: EEALGDAIKARRMCTRARGRRGC*RAECRV
Trigger: CACTCTACACTCTGCTCTTCAACAGCCACGCCGACC...CCTGGCCCGTGTGCACATCCTGCGGGCTTTGATGGCATCCCCAAGTGCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR GCA 90 bp GAAGAGGCACTTGGGGATGCCATCAAAGCCCGCAGGATGTGCACACGGGCCAGGTGCTGCTGCAGTAGCTaGTTGGCCTTCACCCAGGTG +
Preference number: 2 (lower is better)
Translates to: EEALGDAIKARRMCTRARCCCSS*LAFTQV
Trigger: CACCTGGGTGAAGGCCAAGCAGCTACTGCAGCAGCA...CCTGGCCCGTGTGCACATCCTGCGGGCTTTGATGGCATCCCCAAGTGCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp GAAGAGCAGAGTGTAGAGTGCAGCGCGGAGTGTGAGGTCGTCCTCGGCCCCTGGCCCTGGTCACGGAGCTaGTGTCTTCATTGGTACTCT +
Preference number: 2 (lower is better)
Translates to: EEQSVECSAECEVVLGPWPWSRS*CLHWYS
Trigger: AGAGTACCAATGAAGACATCAGCTCCGTGACCAGGG...CCAGGGGCCGAGGACGACCTCACACTCCGCGCTGCACTCTACACTCTGCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR GCA 90 bp GCAGGATGTGCACACGGGCCAGGGCCTCCAACTGTCTCACACTTCGAAACTGGTTGGGCAGGGGAGGCCTaGCCTTCCTTCTTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: AGCAHGPGPPTVSHFETGWAGEA*PSFLGS
Trigger: AGAACCCAAGAAGGAAGGGCAGGCCTCCCCTGCCCA...ACCAGTTTCGAAGTGTGAGACAGTTGGAGGCCCTGGCCCGTGTGCACATCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CCA 90 bp GAAGAGCAGAGTGTAGAGTGCAGCGCGGAGTGTGAGGTCGTCCTCGGCCCCTGGAGTCCTCAGGAGGAATaGCCTGGTTGTTCAGCTGTA +
Preference number: 2 (lower is better)
Translates to: EEQSVECSAECEVVLGPWSPQEE*PGCSAV
Trigger: TACAGCTGAACAACCAGGCCATTCCTCCTGAGGACT...CCAGGGGCCGAGGACGACCTCACACTCCGCGCTGCACTCTACACTCTGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CAA 90 bp GTACTCTCTGTGAGAGACTGGGCAGGGGAGGCCTGCCCTTCCTTCTaGGGTTCTGGCTCAAGGGCGTCTTCATTGGGTTTCATGGAGAGC +
Preference number: 2 (lower is better)
Translates to: VLSVRDWAGEACPSF*GSGSRASSLGFMES
Trigger: GCTCTCCATGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAGGGCAGGCCTCCCCTGCCCAGTCTCTCACAGAGAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp ATGTGTTCCAGTAGTGCCGGGCGGCCATCATCACCAGGGAATTGCTGTTTGCCATCACCCAGGTGGCAATaGGGTGCTGCCGGACATTGG +
Preference number: 2 (lower is better)
Translates to: MCSSSAGRPSSPGNCCLPSPRWQ*GAAGHW
Trigger: CCAATGTCCGGCAGCACCTCATTGCCACCTGGGTGA...TGGCAAACAGCAATTCCCTGGTGATGATGGCCGCCCGGCACTACTGGAACACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CCA 90 bp GAAGAGGCACTTGGGGATGCCATCAAAGCCCGCAGGATGTGCACACGGGCCAGGTCAGGAGGAATGGCCTaGTTGTTCAGCTGTACACCT +
Preference number: 2 (lower is better)
Translates to: EEALGDAIKARRMCTRARSGGMA*LFSCTP
Trigger: AGGTGTACAGCTGAACAACCAGGCCATTCCTCCTGA...CCTGGCCCGTGTGCACATCCTGCGGGCTTTGATGGCATCCCCAAGTGCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CAA 90 bp AGAAGCTGTAGGCCATCAAGCAGTCATCTTCATAGGAAGAGGCACTaGGGGATGCCATCAAAGCCCGCAGGATGTGCACACGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: RSCRPSSSHLHRKRH*GMPSKPAGCAHGPG
Trigger: CCCTGGCCCGTGTGCACATCCTGCGGGCTTTGATGGCATCCCCAAGTGCCTCTTCCTATGAAGATGACTGCTTGATGGCCTACAGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp TACGGCCCTGGATGCAGGACACCATACACAGCATTTCTGCTGCGAGCTTGGCGTCAGCTGTACACCTTCTaGGCGCAGAAGGTGGACAGT +
Preference number: 2 (lower is better)
Translates to: YGPGCRTPYTAFLLRAWRQLYTF*AQKVDS
Trigger: ACTGTCCACCTTCTGCGCTCAGAAGGTGTACAGCTG...ACGCCAAGCTCGCAGCAGAAATGCTGTGTATGGTGTCCTGCATCCAGGGCCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR-3UTR TCA 90 bp TTGCACGAGTACATCTCAAGGGCAACTAGGACCCTGGTCACGGAGCTGATGTCTTCGGTGCCTAGCCGCTaGCCAATCTGCTGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: LHEYISRATRTLVTELMSSVPSR*PICCCS
Trigger: ACTGCAGCAGCAGATTGGTCAGCGGCTAGGCACCGA...AGACATCAGCTCCGTGACCAGGGTCCTAGTTGCCCTTGAGATGTACTCGTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR GCA 90 bp GCAGGATGTGCACACGGGCCAGGGCCTCCAACTGTCTCACACTTCGAAACTGGTGATTCTCCTAACTCCTaGCCAATTTCTGCAGCGCGC +
Preference number: 2 (lower is better)
Translates to: AGCAHGPGPPTVSHFETGDSPNS*PISAAR
Trigger: GCGCGCTGCAGAAATTGGGCAGGAGTTAGGAGAATC...ACCAGTTTCGAAGTGTGAGACAGTTGGAGGCCCTGGCCCGTGTGCACATCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CAA 90 bp GAGGCCTGCCCTTCCTTCTTGGGTTCTGGCTCAAGGGCGTCTTCATaGGGTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGG +
Preference number: 2 (lower is better)
Translates to: EACPSFLGSGSRASS*GFMESRISIAQSRW
Trigger: CCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAGGGCAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp TTGCCAGGCCCCCAAACCTGGCACTTTCTACAAAGGCCTTGGCTGCTGCTAGCCCCTCCACAGCTGCTCTaGTATCTGATAGAGTCGAAG +
Preference number: 2 (lower is better)
Translates to: LPGPQTWHFLQRPWLLLAPPQLL*YLIESK
Trigger: CTTCGACTCTATCAGATATCAGAGCAGCTGTGGAGG...GGCTAGCAGCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTTTGGGGGCCTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp CTGGCTCAAGGGCGTCTTCATTGGGTTTCATGGAGAGCAGAATCTCGATTGCCCTGTAGGCGAAATGGGTaGGGCGTGTCAGGGTCTGCA +
Preference number: 2 (lower is better)
Translates to: LAQGRLHWVSWRAESRLPCRRNG*GVSGSA
Trigger: TGCAGACCCTGACACGCCTCACCCATTTCGCCTACA...GGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGACGCCCTTGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp GTCTCACACTTCGAAACTGGTCCAAGGAGGCCGTCTGATTTGAAGGCACTGTACAGTCTGGAAGTCAGCTaGCGGCCACTGGTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: VSHFETGPRRPSDLKALYSLEVS*RPLVQR
Trigger: CCTCTGCACCAGTGGCCGTCAGCTGACTTCCAGACT...GTACAGTGCCTTCAAATCAGACGGCCTCCTTGGACCAGTTTCGAAGTGTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR GCA 90 bp CATCATCACCAGGGAATTGCTGTTTGCCAGGCCCCCAAACCTGGCACTTTCTACTGCTGCTGCAGTAGCTaGTTGGCCTTCACCCAGGTG +
Preference number: 2 (lower is better)
Translates to: HHHQGIAVCQAPKPGTFYCCCSS*LAFTQV
Trigger: CACCTGGGTGAAGGCCAAGCAGCTACTGCAGCAGCA...GTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CCA 90 bp GTCTCACACTTCGAAACTGGTCCAAGGAGGCCGTCTGATTTGAAGGCACTGTACGCAGAAGGTGGACAGTaGCTTCTGCGGGAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: VSHFETGPRRPSDLKALYAEGGQ*LLREGR
Trigger: TCTGCCCTCCCGCAGAAGCCACTGTCCACCTTCTGC...GTACAGTGCCTTCAAATCAGACGGCCTCCTTGGACCAGTTTCGAAGTGTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR-3UTR CCA 90 bp GCAGGATGTGCACACGGGCCAGGGCCTCCAACTGTCTCACACTTCGAAACTGGTAGTCGAAGACTCCAGTaGACCATGAACCAAGGTAGG +
Preference number: 2 (lower is better)
Translates to: AGCAHGPGPPTVSHFETGSRRLQ*TMNQGR
Trigger: CCTACCTTGGTTCATGGTCCACTGGAGTCTTCGACT...ACCAGTTTCGAAGTGTGAGACAGTTGGAGGCCCTGGCCCGTGTGCACATCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CAA 90 bp TTGCTGTTTGCCAGGCCCCCAAACCTGGCACTTTCTACAAAGGCCTaGGCTGCTGCTAGCCGTAGCTGCTTCCTGCCTTTCAAGTTTTCC +
Preference number: 2 (lower is better)
Translates to: LLFARPPNLALSTKA*AAASRSCFLPFKFS
Trigger: GGAAAACTTGAAAGGCAGGAAGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp GTCTCACACTTCGAAACTGGTCCAAGGAGGCCGTCTGATTTGAAGGCACTGTACTGTAGGCGAAATGGGTaGGGCGTGTCAGGGTCTGCA +
Preference number: 2 (lower is better)
Translates to: VSHFETGPRRPSDLKALYCRRNG*GVSGSA
Trigger: TGCAGACCCTGACACGCCTCACCCATTTCGCCTACA...GTACAGTGCCTTCAAATCAGACGGCCTCCTTGGACCAGTTTCGAAGTGTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp GGTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGTCAAACACGTCACTTCCTGTTGGCCGGTaGGGACAGAAGTGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: GFMESRISIAQSRWSNTSLPVGR*GQKWEP
Trigger: TGGCTCCCACTTCTGTCCTCACCGGCCAACAGGAAG...TGACGTGTTTGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR GCA 90 bp CCAAACCTGGCACTTTCTACAAAGGCCTTGGCTGCTGCTAGCCGTAGCTGCTTCTCCACCAGCTCTTTCTaGCTCCCAGCCAAGATGAGA +
Preference number: 2 (lower is better)
Translates to: PNLALSTKALAAASRSCFSTSSF*LPAKMR
Trigger: TCTCATCTTGGCTGGGAGGCAGAAAGAGCTGGTGGA...GAAGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR-3UTR GCA 90 bp TCTTCATTGGGTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGTCAGTCCTCGGCAGCACTTaGACAGCCTCGTCCAGCACC +
Preference number: 2 (lower is better)
Translates to: SSLGFMESRISIAQSRWSVLGST*TASSST
Trigger: GGTGCTGGACGAGGCTGTGCAAGTGCTGCCGAGGAC...TGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CCA 90 bp CATCATCACCAGGGAATTGCTGTTTGCCAGGCCCCCAAACCTGGCACTTTCTACTGCAGCTCCACCAGATaGTCAGACCAGTTGCACTCG +
Preference number: 2 (lower is better)
Translates to: HHHQGIAVCQAPKPGTFYCSSTR*SDQLHS
Trigger: CGAGTGCAACTGGTCTGACCATCTGGTGGAGCTGCA...GTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp AGGCCTGCCCTTCCTTCTTGGGTTCTGGCTCAAGGGCGTCTTCATTGGGTTTCACCTCCACAGCTGCTCTaGTATCTGATAGAGTCGAAG +
Preference number: 2 (lower is better)
Translates to: RPALPSWVLAQGRLHWVSPPQLL*YLIESK
Trigger: CTTCGACTCTATCAGATATCAGAGCAGCTGTGGAGG...TGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAGGGCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp CCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGAGGCGGTGGGCACGACCTCAGGTGCTTaGGGCCCATCTGTGTGGCAT +
Preference number: 2 (lower is better)
Translates to: PKLGLHNDHMFENQEAVGTTSGA*GPSVWH
Trigger: ATGCCACACAGATGGGCCTCAAGCACCTGAGGTCGT...GCCCACCGCCTCTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR GCA 90 bp GGCTCAAGGGCGTCTTCATTGGGTTTCATGGAGAGCAGAATCTCGATTGCCCAAGCTGACGGCCACTGGTaGAGAGGCAGGGTTTTATCT +
Preference number: 2 (lower is better)
Translates to: GSRASSLGFMESRISIAQADGHW*RGRVLS
Trigger: AGATAAAACCCTGCCTCTGCACCAGTGGCCGTCAGC...TTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGACGCCCTTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CCA 90 bp AGGCCTGCCCTTCCTTCTTGGGTTCTGGCTCAAGGGCGTCTTCATTGGGTTTCAATGCTGATGATTCTCTaGAGGGATGCCTTGGCCTTC +
Preference number: 2 (lower is better)
Translates to: RPALPSWVLAQGRLHWVSMLMIL*RDALAF
Trigger: GAAGGCCAAGGCATCCCTCCAGAGAATCATCAGCAT...TGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAGGGCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGGTGGGGAAAGAGCCCTaGGTGGGGAGGAGTCACAGA +
Preference number: 2 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLVGKEP*VGRSHR
Trigger: TCTGTGACTCCTCCCCACTCAGGGCTCTTTCCCCAC...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
3UTR-3UTR TCA 90 bp GTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGTCAAACACGTCATACGACCTCAGGTGCTTaGGGCCCATCTGTGTGGCAT +
Preference number: 2 (lower is better)
Translates to: VSWRAESRLPNPGGQTRHTTSGA*GPSVWH
Trigger: ATGCCACACAGATGGGCCTCAAGCACCTGAGGTCGT...ATGACGTGTTTGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTGGGGAAAGAGCCCTaGGTGGGGAGGAGTCACAGA +
Preference number: 2 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAVGKEP*VGRSHR
Trigger: TCTGTGACTCCTCCCCACTCAGGGCTCTTTCCCCAC...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
3UTR-3UTR CCA 90 bp GTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGAGGCGTCTGAGCGCAGAAGGTaGACAGTGGCTTCTGCGGGA +
Preference number: 2 (lower is better)
Translates to: VLPKLGLHNDHMFENQEASERRR*TVASAG
Trigger: TCCCGCAGAAGCCACTGTCCACCTTCTGCGCTCAGA...CGCCTCTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CAA 90 bp CCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCAGGATTATGTATaGTGGACAGGACAGATATCAGGCTGTATCAAGGCTGGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: PRCYTQQQLSSQDYV*WTGQISGCIKAGVS
Trigger: GCTCACCCCAGCCTTGATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCTGGGTATAGCACCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
3UTR CAA 90 bp CAGAGCATGACCAGCATGACTGAGTCCTCTGTGTATCCAACGATCTaGATGATGCTCAGGAAGTGGAATAGGGACTCCACCAGCTCTTTC +
Preference number: 2 (lower is better)
Translates to: QSMTSMTESSVYPTI*MMLRKWNRDSTSSF
Trigger: GAAAGAGCTGGTGGAGTCCCTATTCCACTTCCTGAGCATCATCAAGATCGTTGGATACACAGAGGACTCAGTCATGCTGGTCATGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CAA 90 bp CTTCTGCCAGTTGTTCTCTGGTTTCTGCAGTGCCTGGATAGCATTTaGATAGCAGCTCAACTCTCCACAGACGGTTTTCGAGTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: LLPVVLWFLQCLDSI*IAAQLSTDGFRVLG
Trigger: GCCCAGAACTCGAAAACCGTCTGTGGAGAGTTGAGCTGCTATCAAAATGCTATCCAGGCACTGCAGAAACCAGAGAACAACTGGCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp CCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGAGGCGGTGGGCGTACGTGATCCACTCTaGATTGCTCTCTGGTGGTTC +
Preference number: 2 (lower is better)
Translates to: PKLGLHNDHMFENQEAVGVRDPL*IALWWF
Trigger: GAACCACCAGAGAGCAATTCAGAGTGGATCACGTAC...GCCCACCGCCTCTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR-3UTR TCA 90 bp ATGTGTTCCAGTAGTGCCGGGCGGCCATCATCACCAGGGAATTGCTGTTTGCCAGTTCATGGCATACTGTaGCAAGTTTTCTATCCAGGT +
Preference number: 2 (lower is better)
Translates to: MCSSSAGRPSSPGNCCLPVHGIL*QVFYPG
Trigger: ACCTGGATAGAAAACTTGTCACAGTATGCCATGAAC...TGGCAAACAGCAATTCCCTGGTGATGATGGCCGCCCGGCACTACTGGAACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR-3UTR GCA 90 bp TCATTGGGTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGTCAAACTCTTCATTGGTACTCTaGTCATCGGTGCCTAGCCGC +
Preference number: 2 (lower is better)
Translates to: SLGFMESRISIAQSRWSNSSLVL*SSVPSR
Trigger: GCGGCTAGGCACCGATGAGCAGAGTACCAATGAAGA...GTTTGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp AATCTGCAAGATGTGCTTGAAGAAGCTGTAGGCCATCAAGCAGTCATCTTCATATGGGAATCCAGCTCATaGTCAGGCCTCGAGCAAGGG +
Preference number: 2 (lower is better)
Translates to: NLQDVLEEAVGHQAVIFIWESSS*SGLEQG
Trigger: CCCTTGCTCGAGGCCTGATCATGAGCTGGATTCCCA...TATGAAGATGACTGCTTGATGGCCTACAGCTTCTTCAAGCACATCTTGCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR TCA 90 bp ATCCAGAGGGAACTGCTTGTAATACATCCACTCGCTGAACTCCATGATGTAGTCATCTGTGTGGCATTCTaGGAACACGCCATGGTGACC +
Preference number: 2 (lower is better)
Translates to: IQRELLVIHPLAELHDVVICVAF*EHAMVT
Trigger: GGTCACCATGGCGTGTTCTCAGAATGCCACACAGAT...GACTACATCATGGAGTTCAGCGAGTGGATGTATTACAAGCAGTTCCCTCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR GCA 90 bp TTTTACTCCTTCTGTCAAGGAAATCTGCAAGATGTGCTTGAAGAAGCTGTAGGCAGGCGTGTCAGGGTCTaGAGCTCCACCAGATGGTCA +
Preference number: 2 (lower is better)
Translates to: FYSFCQGNLQDVLEEAVGRRVRV*SSTRWS
Trigger: TGACCATCTGGTGGAGCTGCAGACCCTGACACGCCT...GCCTACAGCTTCTTCAAGCACATCTTGCAGATTTCCTTGACAGAAGGAGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR GCA 90 bp AATCTGCAAGATGTGCTTGAAGAAGCTGTAGGCCATCAAGCAGTCATCTTCATAAGGCGTGTCAGGGTCTaGAGCTCCACCAGATGGTCA +
Preference number: 2 (lower is better)
Translates to: NLQDVLEEAVGHQAVIFIRRVRV*SSTRWS
Trigger: TGACCATCTGGTGGAGCTGCAGACCCTGACACGCCT...TATGAAGATGACTGCTTGATGGCCTACAGCTTCTTCAAGCACATCTTGCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTAGGCTGTATCAAGGCTaGGGTGAGCCCCAGAAAGTG +
Preference number: 2 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCRLYQG*GEPQKV
Trigger: CACTTTCTGGGGCTCACCCCAGCCTTGATACAGCCT...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
3UTR-3UTR CCA 90 bp AATCTGCAAGATGTGCTTGAAGAAGCTGTAGGCCATCAAGCAGTCATCTTCATATCATTCCGGTCGGCGTaGCTGTTGAAGAGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: NLQDVLEEAVGHQAVIFISFRSA*LLKSRV
Trigger: CACTCTGCTCTTCAACAGCCACGCCGACCGGAATGA...TATGAAGATGACTGCTTGATGGCCTACAGCTTCTTCAAGCACATCTTGCAGATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR GCA 90 bp CCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGAGGCGGTGGGCGTTTTATCTGTCTCCTaGTTCTTGTTCTCTGTCTTG +
Preference number: 2 (lower is better)
Translates to: PKLGLHNDHMFENQEAVGVLSVS*FLFSVL
Trigger: CAAGACAGAGAACAAGAAGCAGGAGACAGATAAAAC...GCCCACCGCCTCTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CCA 90 bp AAGTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGAGGATGATGCTCAGGAAGTaGAATAGGGACTCCACCAGC +
Preference number: 2 (lower is better)
Translates to: KFCPSLAFTMTICLKIKRMMLRK*NRDSTS
Trigger: GCTGGTGGAGTCCCTATTCCACTTCCTGAGCATCAT...CCTCTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR-3UTR CCA 90 bp AATCTGCAAGATGTGCTTGAAGAAGCTGTAGGCCATCAAGCAGTCATCTTCATAAGTCGAAGACTCCAGTaGACCATGAACCAAGGTAGG +
Preference number: 2 (lower is better)
Translates to: NLQDVLEEAVGHQAVIFISRRLQ*TMNQGR
Trigger: CCTACCTTGGTTCATGGTCCACTGGAGTCTTCGACT...TATGAAGATGACTGCTTGATGGCCTACAGCTTCTTCAAGCACATCTTGCAGATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATAGAGTGGCTCATTCTTaGAGACCTGGGGTTTCTCGT +
Preference number: 2 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYRVAHS*RPGVSR
Trigger: ACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCT...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
3UTR-3UTR CCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATCTGCAACTCAGAGAGTaGCTCATTCTTGGAGACCTG +
Preference number: 2 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYLQLRE*LILGDL
Trigger: CAGGTCTCCAAGAATGAGCCACTCTCTGAGTTGCAG...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
3UTR-3UTR GCA 90 bp TTTTACTCCTTCTGTCAAGGAAATCTGCAAGATGTGCTTGAAGAAGCTGTAGGCTTGTTCTCTGGTTTCTaGAGTGCCTGGATAGCATTT +
Preference number: 2 (lower is better)
Translates to: FYSFCQGNLQDVLEEAVGLFSGF*SAWIAF
Trigger: AAATGCTATCCAGGCACTGCAGAAACCAGAGAACAA...GCCTACAGCTTCTTCAAGCACATCTTGCAGATTTCCTTGACAGAAGGAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CCA 90 bp GTGAAGTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGGCATCCAGTTGTTCATaGCATACTGTGACAAGTTTT +
Preference number: 2 (lower is better)
Translates to: VKFCPSLAFTMTICLKIKASSCS*HTVTSF
Trigger: AAAACTTGTCACAGTATGCCATGAACAACTGGATGC...CTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAACTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR GCA 72 bp CCGGTCGGCGTGGCTGTTGAAGAGCAGAGTGTAGAGTaGAGCGCGGAGTGTGAGGTCGTCCTCGGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: PVGVAVEEQSVE*SAECEVVLGPW
Trigger: CCAGGGGCCGAGGACGACCTCACACTCCGCGCTGCACTCTACACTCTGCTCTTCAACAGCCACGCCGACCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CAA 90 bp GGCACTTGGGGATGCCATCAAAGCCCGCAGGATGTGCACACGGGCCAGGGCCTCCTCTGGAGGGATGCCTaGGCCTTCTTCCTGTTGGCC +
Preference number: 3 (lower is better)
Translates to: GTWGCHQSPQDVHTGQGLLWRDA*AFFLLA
Trigger: GGCCAACAGGAAGAAGGCCAAGGCATCCCTCCAGAG...GAGGCCCTGGCCCGTGTGCACATCCTGCGGGCTTTGATGGCATCCCCAAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 72 bp AGCTGCTTGGCCTTCACCCAGGTGGCAATGAGGTGCTaGCGGACATTGGTGGGCACGATGTCCTCCGGCACG +
Preference number: 3 (lower is better)
Translates to: SCLAFTQVAMRC*RTLVGTMSSGT
Trigger: CGTGCCGGAGGACATCGTGCCCACCAATGTCCGGCAGCACCTCATTGCCACCTGGGTGAAGGCCAAGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 72 bp AGTAGCTGCTTGGCCTTCACCCAGGTGGCAATGAGGTaGTGCCGGACATTGGTGGGCACGATGTCCTCCGGC +
Preference number: 3 (lower is better)
Translates to: SSCLAFTQVAMR*CRTLVGTMSSG
Trigger: GCCGGAGGACATCGTGCCCACCAATGTCCGGCAGCACCTCATTGCCACCTGGGTGAAGGCCAAGCAGCTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CAA 90 bp AAGAGGCGGTGGGCTGTCCTCGGCAGCACTTGCACAGCCTCGTCCAGCACCTTAAACGACCTCAGGTGCTaGAGGCCCATCTGTGTGGCA +
Preference number: 3 (lower is better)
Translates to: KRRWAVLGSTCTASSSTLNDLRC*RPICVA
Trigger: TGCCACACAGATGGGCCTCAAGCACCTGAGGTCGTT...TAAGGTGCTGGACGAGGCTGTGCAAGTGCTGCCGAGGACAGCCCACCGCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 72 bp GCTGCAGTAGCTGCTTGGCCTTCACCCAGGTGGCAATaGGGTGCTGCCGGACATTGGTGGGCACGATGTCCT +
Preference number: 3 (lower is better)
Translates to: AAVAAWPSPRWQ*GAAGHWWARCP
Trigger: AGGACATCGTGCCCACCAATGTCCGGCAGCACCTCATTGCCACCTGGGTGAAGGCCAAGCAGCTACTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 72 bp GAGGCACTTGGGGATGCCATCAAAGCCCGCAGGATGTaGACACGGGCCAGGGCCTCCAACTGTCTCACACTT +
Preference number: 3 (lower is better)
Translates to: EALGDAIKARRM*TRARASNCLTL
Trigger: AAGTGTGAGACAGTTGGAGGCCCTGGCCCGTGTGCACATCCTGCGGGCTTTGATGGCATCCCCAAGTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 72 bp TCTGCGGGAGGGCAGAGCAGTCTCCATATTCTCCTCTaGCAGCTAGCCGACTGCTCATCTCCCTGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: SAGGQSSLHILL*QLADCSSPCSL
Trigger: GAGGCTGCAGGGAGATGAGCAGTCGGCTAGCTGCCAGAGGAGAATATGGAGACTGCTCTGCCCTCCCGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CCA 72 bp TGGGTGAGGCGTGTCAGGGTCTGCAGCTCCACCAGATaGTCAGACCAGTTGCACTCGGAGGCCATCTTCACC +
Preference number: 3 (lower is better)
Translates to: WVRRVRVCSSTR*SDQLHSEAIFT
Trigger: GGTGAAGATGGCCTCCGAGTGCAACTGGTCTGACCATCTGGTGGAGCTGCAGACCCTGACACGCCTCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 72 bp GTGCCGGGCGGCCATCATCACCAGGGAATTGCTGTTTaGCAGGCCCCCAAACCTGGCACTTTCTACAAAGGC +
Preference number: 3 (lower is better)
Translates to: VPGGHHHQGIAV*QAPKPGTFYKG
Trigger: GCCTTTGTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATGGCCGCCCGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 72 bp ACCCAGTTGAGGGCAGTGGTGAGTGACTCCGGGTGGTaGGGCTGCAACTCAGAGAGTGGCTCATTCTTGGAG +
Preference number: 3 (lower is better)
Translates to: TQLRAVVSDSGW*GCNSESGSFLE
Trigger: CTCCAAGAATGAGCCACTCTCTGAGTTGCAGCCTCACCACCCGGAGTCACTCACCACTGCCCTCAACTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
3UTR GCA 72 bp TCAGGGTCTGCAGCTCCACCAGATGGTCAGACCAGTTaGACTCGGAGGCCATCTTCACCACCTGAACTAGCG +
Preference number: 3 (lower is better)
Translates to: SGSAAPPDGQTS*TRRPSSPPELA
Trigger: CGCTAGTTCAGGTGGTGAAGATGGCCTCCGAGTGCAACTGGTCTGACCATCTGGTGGAGCTGCAGACCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 72 bp TCCAGTAGTGCCGGGCGGCCATCATCACCAGGGAATTaGTGTTTGCCAGGCCCCCAAACCTGGCACTTTCTA +
Preference number: 3 (lower is better)
Translates to: SSSAGRPSSPGN*CLPGPQTWHFL
Trigger: TAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATGGCCGCCCGGCACTACTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 72 bp AAAATCAAGAGGCGGTGGGCTGTCCTCGGCAGCACTTaGACAGCCTCGTCCAGCACCTTAAGACCCATCTCC +
Preference number: 3 (lower is better)
Translates to: KIKRRWAVLGST*TASSSTLRPIS
Trigger: GGAGATGGGTCTTAAGGTGCTGGACGAGGCTGTGCAAGTGCTGCCGAGGACAGCCCACCGCCTCTTGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 72 bp TGGTTGTTCAGCTGTACACCTTCTGAGCGCAGAAGGTaGACAGTGGCTTCTGCGGGAGGGCAGAGCAGTCTC +
Preference number: 3 (lower is better)
Translates to: WLFSCTPSERRR*TVASAGGQSSL
Trigger: GAGACTGCTCTGCCCTCCCGCAGAAGCCACTGTCCACCTTCTGCGCTCAGAAGGTGTACAGCTGAACAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CCA 72 bp AGCCGGCTGGGTGTTGGCTCAAGTCCTCAGGAGGAATaGCCTGGTTGTTCAGCTGTACACCTTCTGAGCGCA +
Preference number: 3 (lower is better)
Translates to: SRLGVGSSPQEE*PGCSAVHLLSA
Trigger: TGCGCTCAGAAGGTGTACAGCTGAACAACCAGGCCATTCCTCCTGAGGACTTGAGCCAACACCCAGCCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CCA 72 bp CCAGGCCCCCAAACCTGGCACTTTCTACAAAGGCCTTaGCTGCTGCTAGCCGTAGCTGCTTCCTGCCTTTCA +
Preference number: 3 (lower is better)
Translates to: PGPQTWHFLQRP*LLLAVAASCLS
Trigger: TGAAAGGCAGGAAGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTTTGGGGGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 72 bp CCTGTCCCTCCAGTCTGGAAGTCAGCTGACGGCCACTaGTGCAGAGGCAGGGTTTTATCTGTCTCCTGCTTC +
Preference number: 3 (lower is better)
Translates to: PVPPVWKSADGH*CRGRVLSVSCF
Trigger: GAAGCAGGAGACAGATAAAACCCTGCCTCTGCACCAGTGGCCGTCAGCTGACTTCCAGACTGGAGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 72 bp CAAGCAGTCATCTTCATAGGAAGAGGCACTTGGGGATaGCATCAAAGCCCGCAGGATGTGCACACGGGCCAG +
Preference number: 3 (lower is better)
Translates to: QAVIFIGRGTWG*HQSPQDVHTGQ
Trigger: CTGGCCCGTGTGCACATCCTGCGGGCTTTGATGGCATCCCCAAGTGCCTCTTCCTATGAAGATGACTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 72 bp TCAGCTGTACACCTTCTGAGCGCAGAAGGTGGACAGTaGCTTCTGCGGGAGGGCAGAGCAGTCTCCATATTC +
Preference number: 3 (lower is better)
Translates to: SAVHLLSAEGGQ*LLREGRAVSIF
Trigger: GAATATGGAGACTGCTCTGCCCTCCCGCAGAAGCCACTGTCCACCTTCTGCGCTCAGAAGGTGTACAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CCA 72 bp GCTGGGTGTTGGCTCAAGTCCTCAGGAGGAATGGCCTaGTTGTTCAGCTGTACACCTTCTGAGCGCAGAAGG +
Preference number: 3 (lower is better)
Translates to: AGCWLKSSGGMA*LFSCTPSERRR
Trigger: CCTTCTGCGCTCAGAAGGTGTACAGCTGAACAACCAGGCCATTCCTCCTGAGGACTTGAGCCAACACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CCA 72 bp TCACCAGGGAATTGCTGTTTGCCAGGCCCCCAAACCTaGCACTTTCTACAAAGGCCTTGGCTGCTGCTAGCC +
Preference number: 3 (lower is better)
Translates to: SPGNCCLPGPQT*HFLQRPWLLLA
Trigger: GGCTAGCAGCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CAA 90 bp TTTCTACAAAGGCCTTGGCTGCTGCTAGCCGTAGCTGCTTCCTGCCTTTCAAGTTGCTGCAGTAGCTGCTaGGCCTTCACCCAGGTGGCA +
Preference number: 3 (lower is better)
Translates to: FLQRPWLLLAVAASCLSSCCSSC*AFTQVA
Trigger: TGCCACCTGGGTGAAGGCCAAGCAGCTACTGCAGCA...ACTTGAAAGGCAGGAAGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTGTAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 72 bp TCTTCATTGGTACTCTGCTCATCGGTGCCTAGCCGCTaGCCAATCTGCTGCTGCAGTAGCTGCTTGGCCTTC +
Preference number: 3 (lower is better)
Translates to: SSLVLCSSVPSR*PICCCSSCLAF
Trigger: GAAGGCCAAGCAGCTACTGCAGCAGCAGATTGGTCAGCGGCTAGGCACCGATGAGCAGAGTACCAATGAAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 72 bp CTCAGGAAGTGGAATAGGGACTCCACCAGCTCTTTCTaGCTCCCAGCCAAGATGAGATGCCGGTTGTGGTTC +
Preference number: 3 (lower is better)
Translates to: LRKWNRDSTSSF*LPAKMRCRLWF
Trigger: GAACCACAACCGGCATCTCATCTTGGCTGGGAGGCAGAAAGAGCTGGTGGAGTCCCTATTCCACTTCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CCA 72 bp GTAGGGCGCACGTTCTTCTTCGACTTTTCAGGTGTCTaGGTGGGAATCCAGCTCATGATCAGGCCTCGAGCA +
Preference number: 3 (lower is better)
Translates to: VGRTFFFDFSGV*VGIQLMIRPRA
Trigger: TGCTCGAGGCCTGATCATGAGCTGGATTCCCACCCAGACACCTGAAAAGTCGAAGAAGAACGTGCGCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CAA 90 bp CCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGAGGCGGTGGGCTGCTGCAGTAGCTGCTaGGCCTTCACCCAGGTGGCA +
Preference number: 3 (lower is better)
Translates to: PKLGLHNDHMFENQEAVGCCSSC*AFTQVA
Trigger: TGCCACCTGGGTGAAGGCCAAGCAGCTACTGCAGCA...GCCCACCGCCTCTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CAA 90 bp CATCATCACCAGGGAATTGCTGTTTGCCAGGCCCCCAAACCTGGCACTTTCTACATGAGGCCCAGCCCATaGCACGAGTACATCTCAAGG +
Preference number: 3 (lower is better)
Translates to: HHHQGIAVCQAPKPGTFYMRPSP*HEYISR
Trigger: CCTTGAGATGTACTCGTGCAATGGGCTGGGCCTCAT...GTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 72 bp CAAAGACTCCAGGGTTTAGCTCACACGATGGCTTGGTaGGGCAGACCATACAGAACCCAGTTGAGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: QRLQGLAHTMAW*GRPYRTQLRAV
Trigger: CACTGCCCTCAACTGGGTTCTGTATGGTCTGCCTCACCAAGCCATCGTGTGAGCTAAACCCTGGAGTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
3UTR-3UTR CAA 90 bp TTGCACGAGTACATCTCAAGGGCAACTAGGACCCTGGTCACGGAGCTGATGTCTGGAGGAATGGCCTGGTaGTTCAGCTGTACACCTTCT +
Preference number: 3 (lower is better)
Translates to: LHEYISRATRTLVTELMSGGMAW*FSCTPS
Trigger: AGAAGGTGTACAGCTGAACAACCAGGCCATTCCTCC...AGACATCAGCTCCGTGACCAGGGTCCTAGTTGCCCTTGAGATGTACTCGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR-3UTR CAA 90 bp GCAGGATGTGCACACGGGCCAGGGCCTCCAACTGTCTCACACTTCGAAACTGGTTCTGTCTCCTGCTTCTaGTTCTCTGTCTTGTTGATG +
Preference number: 3 (lower is better)
Translates to: AGCAHGPGPPTVSHFETGSVSCF*FSVLLM
Trigger: CATCAACAAGACAGAGAACAAGAAGCAGGAGACAGA...ACCAGTTTCGAAGTGTGAGACAGTTGGAGGCCCTGGCCCGTGTGCACATCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 72 bp ACATCTCAAGGGCAACTAGGACCCTGGTCACGGAGCTaGTGTCTTCATTGGTACTCTGCTCATCGGTGCCTA +
Preference number: 3 (lower is better)
Translates to: TSQGQLGPWSRS*CLHWYSAHRCL
Trigger: TAGGCACCGATGAGCAGAGTACCAATGAAGACATCAGCTCCGTGACCAGGGTCCTAGTTGCCCTTGAGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 72 bp CTAGCCGTAGCTGCTTCCTGCCTTTCAAGTTTTCCATaGTGCTACGGCCCTGGATGCAGGACACCATACACA +
Preference number: 3 (lower is better)
Translates to: LAVAASCLSSFP*CYGPGCRTPYT
Trigger: TGTGTATGGTGTCCTGCATCCAGGGCCGTAGCATCATGGAAAACTTGAAAGGCAGGAAGCAGCTACGGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 72 bp ACGGCGTTCTGCACAATCCAGGATTCTCCTAACTCCTaGCCAATTTCTGCAGCGCGCATCCAGTTGTTCATG +
Preference number: 3 (lower is better)
Translates to: TAFCTIQDSPNS*PISAARIQLFM
Trigger: CATGAACAACTGGATGCGCGCTGCAGAAATTGGGCAGGAGTTAGGAGAATCCTGGATTGTGCAGAACGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CCA 72 bp TGGGTTCTGGCTCAAGGGCGTCTTCATTGGGTTTCATaGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: WVLAQGRLHWVS*RAESRLPNPGG
Trigger: ACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 72 bp GGCTGCAACTCAGAGAGTGGCTCATTCTTGGAGACCTaGGGTTTCTCGTCTTGGCTACCTGGTTCATTGCAT +
Preference number: 3 (lower is better)
Translates to: GCNSESGSFLET*GFSSWLPGSLH
Trigger: ATGCAATGAACCAGGTAGCCAAGACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCTCTGAGTTGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
3UTR-3UTR CAA 90 bp GTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTAGCTCACACGATGCCATACAGAACCCAGTaGAGGGCAGTGGTGAGTGAC +
Preference number: 3 (lower is better)
Translates to: VELGIVASQRLQGLAHTMPYRTQ*RAVVSD
Trigger: GTCACTCACCACTGCCCTCAACTGGGTTCTGTATGG...CATCGTGTGAGCTAAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
3UTR TCA 72 bp CAAGTTTTCTATCCAGGTTCTGTACGTGATCCACTCTaGATTGCTCTCTGGTGGTTCAGGCACGTAGCCGGC +
Preference number: 3 (lower is better)
Translates to: QVFYPGSVRDPL*IALWWFRHVAG
Trigger: GCCGGCTACGTGCCTGAACCACCAGAGAGCAATTCAGAGTGGATCACGTACAGAACCTGGATAGAAAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR GCA 72 bp CTTTCTACAAAGGCCTTGGCTGCTGCTAGCCGTAGCTaGTTCCTGCCTTTCAAGTTTTCCATGATGCTACGG +
Preference number: 3 (lower is better)
Translates to: LSTKALAAASRS*FLPFKFSMMLR
Trigger: CCGTAGCATCATGGAAAACTTGAAAGGCAGGAAGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTGTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 72 bp TTCCTGCCTTTCAAGTTTTCCATGATGCTACGGCCCTaGATGCAGGACACCATACACAGCATTTCTGCTGCG +
Preference number: 3 (lower is better)
Translates to: FLPFKFSMMLRP*MQDTIHSISAA
Trigger: CGCAGCAGAAATGCTGTGTATGGTGTCCTGCATCCAGGGCCGTAGCATCATGGAAAACTTGAAAGGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR GCA 72 bp GTCTTCATTGGGTTTCATGGAGAGCAGAATCTCGATTaGCCAATCCAGGTGGTCAAACACGTCATCCAGAGG +
Preference number: 3 (lower is better)
Translates to: VFIGFHGEQNLD*PIQVVKHVIQR
Trigger: CCTCTGGATGACGTGTTTGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CCA 72 bp TCTGTGTATCCAACGATCTTGATGATGCTCAGGAAGTaGAATAGGGACTCCACCAGCTCTTTCTGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: SVYPTILMMLRK*NRDSTSSFCLP
Trigger: TGGGAGGCAGAAAGAGCTGGTGGAGTCCCTATTCCACTTCCTGAGCATCATCAAGATCGTTGGATACACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CCA 72 bp CTTCCTTCTTGGGTTCTGGCTCAAGGGCGTCTTCATTaGGTTTCATGGAGAGCAGAATCTCGATTGCCCAAT +
Preference number: 3 (lower is better)
Translates to: LPSWVLAQGRLH*VSWRAESRLPN
Trigger: ATTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 72 bp TCGAGCAAGGGCATTACAGAGCATGACCAGCATGACTaGGTCCTCTGTGTATCCAACGATCTTGATGATGCT +
Preference number: 3 (lower is better)
Translates to: SSKGITEHDQHD*VLCVSNDLDDA
Trigger: AGCATCATCAAGATCGTTGGATACACAGAGGACTCAGTCATGCTGGTCATGCTCTGTAATGCCCTTGCTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR TCA 72 bp GGTTCAGTGCAAATTCACAGACCTCCACAGCTGCTCTaGTATCTGATAGAGTCGAAGACTCCAGTGGACCAT +
Preference number: 3 (lower is better)
Translates to: GSVQIHRPPQLL*YLIESKTPVDH
Trigger: ATGGTCCACTGGAGTCTTCGACTCTATCAGATATCAGAGCAGCTGTGGAGGTCTGTGAATTTGCACTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CAA 90 bp TTTTACTCCTTCTGTCAAGGAAATCTGCAAGATGTGCTTGAAGAAGCTGTAGGCATGAGGCCCAGCCCATaGCACGAGTACATCTCAAGG +
Preference number: 3 (lower is better)
Translates to: FYSFCQGNLQDVLEEAVGMRPSP*HEYISR
Trigger: CCTTGAGATGTACTCGTGCAATGGGCTGGGCCTCAT...GCCTACAGCTTCTTCAAGCACATCTTGCAGATTTCCTTGACAGAAGGAGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR-3UTR CAA 90 bp CTAACCGCTTGCAAATTCTTTTCTGGAATTAGTTTTACTCCTTCTGTCAAGGAACCAGGGAATTGCTGTTaGCCAGGCCCCCAAACCTGG +
Preference number: 3 (lower is better)
Translates to: LTACKFFSGISFTPSVKEPGNCC*PGPQTW
Trigger: CCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGG...TTCCTTGACAGAAGGAGTAAAACTAATTCCAGAAAAGAATTTGCAAGCGGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR TCA 72 bp TTCTGCAGCGCGCATCCAGTTGTTCATGGCATACTGTaGCAAGTTTTCTATCCAGGTTCTGTACGTGATCCA +
Preference number: 3 (lower is better)
Translates to: FCSAHPVVHGIL*QVFYPGSVRDP
Trigger: TGGATCACGTACAGAACCTGGATAGAAAACTTGTCACAGTATGCCATGAACAACTGGATGCGCGCTGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR-3UTR CAA 90 bp TCTTCATTGGGTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGTCATTCTTGTTCTCTGTCTaGTTGATGATGCTGATGATT +
Preference number: 3 (lower is better)
Translates to: SSLGFMESRISIAQSRWSFLFSV*LMMLMI
Trigger: AATCATCAGCATCATCAACAAGACAGAGAACAAGAA...TGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CAA 72 bp GCCTTCACCCAGGTGGCAATGAGGTGCTGCCGGACATaGGTGGGCACGATGTCCTCCGGCACGTTCCCGTTA +
Preference number: 4 (lower is better)
Translates to: AFTQVAMRCCRT*VGTMSSGTFPL
Trigger: TAACGGGAACGTGCCGGAGGACATCGTGCCCACCAATGTCCGGCAGCACCTCATTGCCACCTGGGTGAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR TCA 90 bp GGCACTTGGGGATGCCATCAAAGCCCGCAGGATGTGCACACGGGCCAGGGCCTCTCATGGAGCCCTCAATaGCTTTCTTCTTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GTWGCHQSPQDVHTGQGLSWSPQ*LSSSSL
Trigger: GAGGGAGGAAGAAGAAAGTCATTGAGGGCTCCATGA...GAGGCCCTGGCCCGTGTGCACATCCTGCGGGCTTTGATGGCATCCCCAAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
3UTR CAA 72 bp GCTCTCTGGTGGTTCAGGCACGTAGCCGGCTGGGTGTaGGCTCAAGTCCTCAGGAGGAATGGCCTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: ALWWFRHVAGWV*AQVLRRNGLVV
Trigger: AACAACCAGGCCATTCCTCCTGAGGACTTGAGCCAACACCCAGCCGGCTACGTGCCTGAACCACCAGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CAA 72 bp GCCAGGCCCCCAAACCTGGCACTTTCTACAAAGGCCTaGGCTGCTGCTAGCCGTAGCTGCTTCCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: ARPPNLALSTKA*AAASRSCFLPF
Trigger: GAAAGGCAGGAAGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTTTGGGGGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR GCA 90 bp TCTGTGAGAGACTGGGCAGGGGAGGCCTGCCCTTCCTTCTTGGGTTCTGGCTCAACATCCCACACATCTTaGTGCCAGGCAACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SVRDWAGEACPSFLGSGSTSHTS*CQATLA
Trigger: GGCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGT...TGAGCCAGAACCCAAGAAGGAAGGGCAGGCCTCCCCTGCCCAGTCTCTCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CCA 90 bp TGCTGCAGTAGCTGCTTGGCCTTCACCCAGGTGGCAATGAGGTGCTGCCGGACACCGGGCACTGTCTTTTaGGGTGGCTTTCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: CCSSCLAFTQVAMRCCRTPGTVF*GGFLCL
Trigger: CAGGCAAAGAAAGCCACCCCAAAAGACAGTGCCCGG...TGTCCGGCAGCACCTCATTGCCACCTGGGTGAAGGCCAAGCAGCTACTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CCA 90 bp AGTGTGAGGTCGTCCTCGGCCCCTGGGAGGAACGGGATTTCAGGGCCTGTCCCTATGATGCTCAGGAAGTaGAATAGGGACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SVRSSSAPGRNGISGPVPMMLRK*NRDSTS
Trigger: GCTGGTGGAGTCCCTATTCCACTTCCTGAGCATCAT...AGGGACAGGCCCTGAAATCCCGTTCCTCCCAGGGGCCGAGGACGACCTCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS-3UTR CCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGCAGGAGCAGCCGGGCTaGTTGGTGCAGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQQEQPG*LVQLQL
Trigger: GAGCTGGAGCTGCACCAACCAGCCCGGCTGCTCCTG...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGTGCTGCCTGAGTCGCTaGTGGAGCTGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQCCLSR*WSCSRA
Trigger: GGCCCTGCTGCAGCTCCACCAGCGACTCAGGCAGCA...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GGGCGGCCATCATCACCAGGGAATTGCTGTTTGCCAGGCCCCCAAACCTGGCACTCATGGAGCCCTCAATaGCTTTCTTCTTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GRPSSPGNCCLPGPQTWHSWSPQ*LSSSSL
Trigger: GAGGGAGGAAGAAGAAAGTCATTGAGGGCTCCATGA...GTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATGGCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR TCA 90 bp GGGCGGCCATCATCACCAGGGAATTGCTGTTTGCCAGGCCCCCAAACCTGGCACGTACGTGATCCACTCTaGATTGCTCTCTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GRPSSPGNCCLPGPQTWHVRDPL*IALWWF
Trigger: GAACCACCAGAGAGCAATTCAGAGTGGATCACGTAC...GTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATGGCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS-3UTR GCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGCTTCCGGAGGTGGTaGCTCAGGTTGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQGFRRW*LRLCCS
Trigger: GCTGCAGCACAACCTGAGGCACCACCTCCGGAAGCC...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp CGAAGACTCCAGTGGACCATGAACCAAGGTAGGGCGCACGTTCTTCTTCGACTTGGCTTCCGGAGGTGGTaGCTCAGGTTGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RRLQWTMNQGRAHVLLRLGFRRW*LRLCCS
Trigger: GCTGCAGCACAACCTGAGGCACCACCTCCGGAAGCC...AAGTCGAAGAAGAACGTGCGCCCTACCTTGGTTCATGGTCCACTGGAGTCTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR GCA 90 bp TGTTTGCCAGGCCCCCAAACCTGGCACTTTCTACAAAGGCCTTGGCTGCTGCTAGGCAAGAGCCAGGCCTaGGTTCACCAGGATTGCACG +
Preference number: 4 (lower is better)
Translates to: CLPGPQTWHFLQRPWLLLGKSQA*VHQDCT
Trigger: CGTGCAATCCTGGTGAACGCAGGCCTGGCTCTTGCC...TAGCAGCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR GCA 90 bp TGGGAGCCATGTGTTCCAGTAGTGCCGGGCGGCCATCATCACCAGGGAATTGCTACATCCCACACATCTTaGTGCCAGGCAACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: WEPCVPVVPGGHHHQGIATSHTS*CQATLA
Trigger: GGCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGT...AGCAATTCCCTGGTGATGATGGCCGCCCGGCACTACTGGAACACATGGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR TCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGTCGGTGCCTAGCCGCTaGCCAATCTGCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQSVPSR*PICCCS
Trigger: ACTGCAGCAGCAGATTGGTCAGCGGCTAGGCACCGA...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTGTCCTCGGCAGCACTTaGACAGCCTCGTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTVLGST*TASSST
Trigger: GGTGCTGGACGAGGCTGTGCAAGTGCTGCCGAGGAC...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGTGGGCAGGGGAGGCCTaGCCTTCCTTCTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQWAGEA*PSFLGS
Trigger: AGAACCCAAGAAGGAAGGGCAGGCCTCCCCTGCCCA...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CCATCATCACCAGGGAATTGCTGTTTGCCAGGCCCCCAAACCTGGCACTTTCTAAGGCACGTAGCCGGCTaGGTGTTGGCTCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PSSPGNCCLPGPQTWHFLRHVAG*VLAQVL
Trigger: GAGGACTTGAGCCAACACCCAGCCGGCTACGTGCCT...TAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS-3UTR CCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCTCTCTGTGAGAGACTaGGCAGGGGAGGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTLSVRD*AGEACP
Trigger: AGGGCAGGCCTCCCCTGCCCAGTCTCTCACAGAGAG...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
3UTR CAA 72 bp GGGTGTTGGCTCAAGTCCTCAGGAGGAATGGCCTGGTaGTTCAGCTGTACACCTTCTGAGCGCAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GCWLKSSGGMAW*FSCTPSERRRW
Trigger: CCACCTTCTGCGCTCAGAAGGTGTACAGCTGAACAACCAGGCCATTCCTCCTGAGGACTTGAGCCAACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
3UTR CAA 72 bp GACACCATACACAGCATTTCTGCTGCGAGCTTGGCGTaGCTCGGTTCAAACGACCTCAGGTGCTTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: DTIHSISAASLA*LGSNDLRCLRP
Trigger: GGGCCTCAAGCACCTGAGGTCGTTTGAACCGAGCAACGCCAAGCTCGCAGCAGAAATGCTGTGTATGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR TCA 90 bp AAGAGGCGGTGGGCTGTCCTCGGCAGCACTTGCACAGCCTCGTCCAGCACCTTAAGCGCAACAGGATCATaGGACTATCAACCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KRRWAVLGSTCTASSSTLSATGS*DYQPFP
Trigger: TGGAAAAGGTTGATAGTCTCATGATCCTGTTGCGCT...TAAGGTGCTGGACGAGGCTGTGCAAGTGCTGCCGAGGACAGCCCACCGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR TCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTAGTCTGGAAGTCAGCTaGCGGCCACTGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTSLEVS*RPLVQR
Trigger: CCTCTGCACCAGTGGCCGTCAGCTGACTTCCAGACT...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGAACTGGCAGGTGGTaGTGGGATCCAGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQGTGRW*WDPGCQ
Trigger: TTGGCATCCTGGATCCCATCACCACCTGCCAGTTCC...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTGGCAAGAGCCAGGCCTaGGTTCACCAGGATTGCACG +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTGKSQA*VHQDCT
Trigger: CGTGCAATCCTGGTGAACGCAGGCCTGGCTCTTGCC...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGAGGCCCACTCTCCTATaGTGGTGGGGATCTCATCCG +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQRPTLL*WWGSHP
Trigger: CGGATGAGATCCCCACCAGCATAGGAGAGTGGGCCT...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTGGTCCGCAAGGCTCTTaGTCTCCACCACGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTGPQGS*SPPRLL
Trigger: CAGAAGCCGTGGTGGAGAGCAAGAGCCTTGCGGACC...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTGAGCCCTGCTCCATCTaGAGATCCAGGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTEPCSI*RSRASL
Trigger: CAAGGAGGCCCTGGATCTGCAGATGGAGCAGGGCTC...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGAGGCGGTGGGCTGTGGGGCACAAAGCTaGGCCCTGCACAGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: PKLGLHNDHMFENQEAVGCGAQS*ALHRCA
Trigger: AGCGCACCTGTGCAGGGCCCAGCTTTGTGCCCCACA...GCCCACCGCCTCTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGCACGTGGATGGTCGTaGGGTTACCCAGACGAATGG +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQARGWS*GYPDEW
Trigger: CCATTCGTCTGGGTAACCCCACGACCATCCACGTGC...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CGAAGACTCCAGTGGACCATGAACCAAGGTAGGGCGCACGTTCTTCTTCGACTTGCACGTGGATGGTCGTaGGGTTACCCAGACGAATGG +
Preference number: 4 (lower is better)
Translates to: RRLQWTMNQGRAHVLLRLARGWS*GYPDEW
Trigger: CCATTCGTCTGGGTAACCCCACGACCATCCACGTGC...AAGTCGAAGAAGAACGTGCGCCCTACCTTGGTTCATGGTCCACTGGAGTCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CCA 90 bp GATGCTACGGCCCTGGATGCAGGACACCATACACAGCATTTCTGCTGCGAGCTTCTGTCCAGCACAATCTaGAAGGTGTCGGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: DATALDAGHHTQHFCCELLSSTI*KVSGAR
Trigger: TCTTGCCCCCGACACCTTCCAGATTGTGCTGGACAG...AAGCTCGCAGCAGAAATGCTGTGTATGGTGTCCTGCATCCAGGGCCGTAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGCCTGCCCTTCCTTCTTaGGTTCTGGCTCAAGGGCGT +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQPALPS*VLAQGR
Trigger: ACGCCCTTGAGCCAGAACCCAAGAAGGAAGGGCAGG...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCGCCCCGCCCAGCTGCTaGGCCCTCTCAACCATGAGC +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLAPPSC*ALSTMS
Trigger: GCTCATGGTTGAGAGGGCCCAGCAGCTGGGCGGGGC...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTGCAGCCCACACACAGTaGCTGCAGACTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTAAHTQ*LQTLQL
Trigger: CAGCTGGAGAGTCTGCAGCCACTGTGTGTGGGCTGC...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTTCTGGGAAGGTGAGCTaGGGGGTGATGGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTSGKVS*GVMGFR
Trigger: CCTGAAGCCCATCACCCCCCAGCTCACCTTCCCAGA...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGCAGCTGTACACCTTCTaGGCGCAGAAGGTGGACAGT +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQQLYTF*AQKVDS
Trigger: ACTGTCCACCTTCTGCGCTCAGAAGGTGTACAGCTG...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGAGGCGCACAAAGCTGGGCCCTaGACAGGTGCGCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: VLPKLGLHNDHMFENQEAHKAGP*TGALGP
Trigger: TGGGCCGAGCGCACCTGTGCAGGGCCCAGCTTTGTG...CGCCTCTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR GCA 90 bp GTCTCACACTTCGAAACTGGTCCAAGGAGGCCGTCTGATTTGAAGGCACTGTACTGCCTCAGGTTGTGCTaGAGCAGGGGCAGGCAGATA +
Preference number: 4 (lower is better)
Translates to: VSHFETGPRRPSDLKALYCLRLC*SRGRQI
Trigger: TATCTGCCTGCCCCTGCTGCAGCACAACCTGAGGCA...GTACAGTGCCTTCAAATCAGACGGCCTCCTTGGACCAGTTTCGAAGTGTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR GCA 90 bp GGTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGTCAAACACGTCAGGCAAGAGCCAGGCCTaGGTTCACCAGGATTGCACG +
Preference number: 4 (lower is better)
Translates to: GFMESRISIAQSRWSNTSGKSQA*VHQDCT
Trigger: CGTGCAATCCTGGTGAACGCAGGCCTGGCTCTTGCC...TGACGTGTTTGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR GCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTTGCTGCTGCAGTAGCTaGTTGGCCTTCACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTCCCSS*LAFTQV
Trigger: CACCTGGGTGAAGGCCAAGCAGCTACTGCAGCAGCA...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCAGTCGCTGGTGGAGCTaGAGCAGGGCCGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLSRWWS*SRAASC
Trigger: ACAGCTGGCGGCCCTGCTGCAGCTCCACCAGCGACT...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGACATCTTGTCTTGCTaGCTGAGTCGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQDILSC*LSRWWS
Trigger: GCTCCACCAGCGACTCAGGCAGCAAGACAAGATGTC...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGCTGTCCAGCACAATCTaGAAGGTGTCGGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQLSSTI*KVSGAR
Trigger: TCTTGCCCCCGACACCTTCCAGATTGTGCTGGACAG...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CTCAGAGAGTGGCTCATTCTTGGAGACCTGGGGTTTCTCGTCTTGGCTACCTGGTGGCTTGGAAAGTTGTaGTTTCCCAGGTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: LREWLILGDLGFLVLATWWLGKL*FPRCPI
Trigger: GATGGGGCACCTGGGAAACCACAACTTTCCAAGCCA...CCAGGTAGCCAAGACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp GCTGCAACTCAGAGAGTGGCTCATTCTTGGAGACCTGGGGTTTCTCGTCTTGGCTGTCCTGCATCAGTGTaGGCCACTGGTTGTCGACAA +
Preference number: 4 (lower is better)
Translates to: AATQRVAHSWRPGVSRLGCPASV*ATGCRQ
Trigger: TTGTCGACAACCAGTGGCCCACACTGATGCAGGACA...GCCAAGACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCTCTGAGTTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
3UTR CAA 72 bp ATGCAGGACACCATACACAGCATTTCTGCTGCGAGCTaGGCGTTGCTCGGTTCAAACGACCTCAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: MQDTIHSISAAS*ALLGSNDLRCL
Trigger: CAAGCACCTGAGGTCGTTTGAACCGAGCAACGCCAAGCTCGCAGCAGAAATGCTGTGTATGGTGTCCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR TCA 90 bp TACGGCCCTGGATGCAGGACACCATACACAGCATTTCTGCTGCGAGCTTGGCGTTTGGCGCCTTCACTTTaGAGTACATCTGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: YGPGCRTPYTAFLLRAWRLAPSL*STSGCS
Trigger: ACTGCATCCAGATGTACTTCAAAGTGAAGGCGCCAA...ACGCCAAGCTCGCAGCAGAAATGCTGTGTATGGTGTCCTGCATCCAGGGCCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR TCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTTGGGAATCCAGCTCATaGTCAGGCCTCGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFWESSS*SGLEQG
Trigger: CCCTTGCTCGAGGCCTGATCATGAGCTGGATTCCCA...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCCAGGGCCGCCAGCTGTaGGCTGCCCGTGTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLQGRQL*AARVFR
Trigger: ACGAAAAACACGGGCAGCTCACAGCTGGCGGCCCTG...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTGGCTCTGCCATGCCCTaGAAGAGGAGGCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFGSAMP*KRRPVS
Trigger: AGAAACTGGCCTCCTCTTTCAGGGCATGGCAGAGCC...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCACAAAGCTGGGCCCTaGACAGGTGCGCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCHKAGP*TGALGP
Trigger: TGGGCCGAGCGCACCTGTGCAGGGCCCAGCTTTGTG...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp TTGCACGAGTACATCTCAAGGGCAACTAGGACCCTGGTCACGGAGCTGATGTCTCTTGAGTGCCTGCTCTaGACACAGCACAAACAGGTC +
Preference number: 4 (lower is better)
Translates to: LHEYISRATRTLVTELMSLECLL*TQHKQV
Trigger: GACCTGTTTGTGCTGTGTGCAGAGCAGGCACTCAAG...AGACATCAGCTCCGTGACCAGGGTCCTAGTTGCCCTTGAGATGTACTCGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR GCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTAGGCGTGTCAGGGTCTaGAGCTCCACCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFRRVRV*SSTRWS
Trigger: TGACCATCTGGTGGAGCTGCAGACCCTGACACGCCT...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGTTTCTGCAGCTGGCCTaGTCCATGTCCCCGAAGTAT +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQFLQLA*SMSPKY
Trigger: ATACTTCGGGGACATGGAGCAGGCCAGCTGCAGAAA...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp TCTGCTCATCGGTGCCTAGCCGCTGACCAATCTGCTGCTGCAGTAGCTGCTTGGTCCCAATGGAAACTTTaGACTCATTCTCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SAHRCLAADQSAAAVAAWSQWKL*THSRCP
Trigger: TGGACAGCGAGAATGAGTCCAAAGTTTCCATTGGGA...CCAAGCAGCTACTGCAGCAGCAGATTGGTCAGCGGCTAGGCACCGATGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CCA 90 bp AGGCCTGCCCTTCCTTCTTGGGTTCTGGCTCAAGGGCGTCTTCATTGGGTTTCAAGTCCTCAGGAGGAATaGCCTGGTTGTTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: RPALPSWVLAQGRLHWVSSPQEE*PGCSAV
Trigger: TACAGCTGAACAACCAGGCCATTCCTCCTGAGGACT...TGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAGGGCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS-3UTR CCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTTGCAGCTCCACCAGATaGTCAGACCAGTTGCACTCG +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTCSSTR*SDQLHS
Trigger: CGAGTGCAACTGGTCTGACCATCTGGTGGAGCTGCA...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGTGGCTTGGAAAGTTGTaGTTTCCCAGGTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQWLGKL*FPRCPI
Trigger: GATGGGGCACCTGGGAAACCACAACTTTCCAAGCCA...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGCCAGTCAGCCTGGCTTaGAAAGTTGTGGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQPVSLA*KVVVSQ
Trigger: CTGGGAAACCACAACTTTCCAAGCCAGGCTGACTGG...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp GAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTAGCTCACACGATGGCTAGAAGGATGGCCGTCTaGATGGGCTTCACCAAGGAC +
Preference number: 4 (lower is better)
Translates to: ELGIVASQRLQGLAHTMARRMAV*MGFTKD
Trigger: GTCCTTGGTGAAGCCCATCCAGACGGCCATCCTTCT...AGCCATCGTGTGAGCTAAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp AGAGTGGCTCATTCTTGGAGACCTGGGGTTTCTCGTCTTGGCTACCTGGTTCATCCAGACTCAGAAGGATaGCCGTCTGGATGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RVAHSWRPGVSRLGYLVHPDSEG*PSGWAS
Trigger: TGAAGCCCATCCAGACGGCCATCCTTCTGAGTCTGG...ATGAACCAGGTAGCCAAGACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS-3UTR TCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGGGGCACCTGGGTTCTaGCGAATGGCGCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAGAPGF*RMALLS
Trigger: TGACAGCAGCGCCATTCGTCAGAACCCAGGTGCCCC...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCAGGCTCTTTCATCTTaGGTGCCTGCTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTQALSS*VPALHT
Trigger: TGTGTGCAGAGCAGGCACTCAAGATGAAAGAGCCTG...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCGCACTGTACTCTCTGTaGGAGACTGGGCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLALYSL*ETGQGR
Trigger: CCTCCCCTGCCCAGTCTCTCACAGAGAGTACAGTGC...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTAGCTCACACGATGGTACCTCTGGCCCTCTaGGCTTTCTATCGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: VELGIVASQRLQGLAHTMVPLAL*AFYRPL
Trigger: AAGCGGACGATAGAAAGCTCAGAGGGCCAGAGGTAC...CATCGTGTGAGCTAAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS-3UTR GCA 90 bp GATGCTACGGCCCTGGATGCAGGACACCATACACAGCATTTCTGCTGCGAGCTTGCAGATATTCCACTGTaGAGTACACAGCACGTGGAT +
Preference number: 4 (lower is better)
Translates to: DATALDAGHHTQHFCCELADIPL*STQHVD
Trigger: ATCCACGTGCTGTGTACTGCACAGTGGAATATCTGC...AAGCTCGCAGCAGAAATGCTGTGTATGGTGTCCTGCATCCAGGGCCGTAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR GCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTGATTCTCCTAACTCCTaGCCAATTTCTGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTDSPNS*PISAAR
Trigger: GCGCGCTGCAGAAATTGGGCAGGAGTTAGGAGAATC...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTTCCTTGACCCGTGTCTaGCTCTGGAACCACTGGATA +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTSLTRV*LWNHWI
Trigger: TATCCAGTGGTTCCAGAGGCAGACACGGGTCAAGGA...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GATGCTACGGCCCTGGATGCAGGACACCATACACAGCATTTCTGCTGCGAGCTTAACACAGTGATGATTTaGGAGAGGCTGGGAATCACG +
Preference number: 4 (lower is better)
Translates to: DATALDAGHHTQHFCCELNTVMI*ERLGIT
Trigger: CGTGATTCCCAGCCTCTCCCAAATCATCACTGTGTT...AAGCTCGCAGCAGAAATGCTGTGTATGGTGTCCTGCATCCAGGGCCGTAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGAGGCACGTAGCCGGCTaGGTGTTGGCTCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLRHVAG*VLAQVL
Trigger: GAGGACTTGAGCCAACACCCAGCCGGCTACGTGCCT...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGAGTCGAAGACTCCAGTaGACCATGAACCAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQSRRLQ*TMNQGR
Trigger: CCTACCTTGGTTCATGGTCCACTGGAGTCTTCGACT...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCAGCCAGAGTCAGGGTaGACTTGTACCAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTQPESG*TCTRTP
Trigger: AGGAGTTCTGGTACAAGTCCACCCTGACTCTGGCTG...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTGACAGTGTTAGGAACTaGCAGGTGGTGATGGGATCC +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTDSVRN*QVVMGS
Trigger: GGATCCCATCACCACCTGCCAGTTCCTAACACTGTC...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTAGAAGGATGGCCGTCTaGATGGGCTTCACCAAGGAC +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFRRMAV*MGFTKD
Trigger: GTCCTTGGTGAAGCCCATCCAGACGGCCATCCTTCT...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTGGTTGTCCCACAGGATaGTGGCCCTCAGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFGCPTG*WPSACC
Trigger: ACAACATGCTGAGGGCCACCATCCTGTGGGACAACC...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp GTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTAGCTCACACGATGGGTTGTCCCACAGGATaGTGGCCCTCAGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: VELGIVASQRLQGLAHTMGCPTG*WPSACC
Trigger: ACAACATGCTGAGGGCCACCATCCTGTGGGACAACC...CATCGTGTGAGCTAAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGAGAGTGGCTCATTCTTaGAGACCTGGGGTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQRVAHS*RPGVSR
Trigger: ACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCT...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp CCAAACCTGGCACTTTCTACAAAGGCCTTGGCTGCTGCTAGCCGTAGCTGCTTCCCAGGTTTGCAGACTTaGTCAGTTCATAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PNLALSTKALAAASRSCFPGLQT*SVHKLF
Trigger: GAAGAGCTTATGAACTGATCAAGTCTGCAAACCTGG...GAAGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR TCA 90 bp CAAAGGCCTTGGCTGCTGCTAGCCGTAGCTGCTTCCTGCCTTTCAAGTTTTCCAGGCGGTAGGTTATCTTaGTCTTGTCCCTGTAGATAC +
Preference number: 4 (lower is better)
Translates to: QRPWLLLAVAASCLSSFPGGRLS*SCPCRY
Trigger: GTATCTACAGGGACAAGATCAAGATAACCTACCGCC...TGGAAAACTTGAAAGGCAGGAAGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR TCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTTCACCCAGGTGGCAATaGGGTGCTGCCGGACATTGG +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQASPRWQ*GAAGHW
Trigger: CCAATGTCCGGCAGCACCTCATTGCCACCTGGGTGA...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTATCTGTGTGGCATTCTaGGAACACGCCATGGTGACC +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFICVAF*EHAMVT
Trigger: GGTCACCATGGCGTGTTCTCAGAATGCCACACAGAT...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTCTTCCTGTTGGCCGGTaGGGACAGAAGTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQALPVGR*GQKWEP
Trigger: TGGCTCCCACTTCTGTCCTCACCGGCCAACAGGAAG...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTCTTGAGTGCCTGCTCTaGACACAGCACAAACAGGTC +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFLECLL*TQHKQV
Trigger: GACCTGTTTGTGCTGTGTGCAGAGCAGGCACTCAAG...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GTCTCACACTTCGAAACTGGTCCAAGGAGGCCGTCTGATTTGAAGGCACTGTACCTCTTTCATCTTGAGTaGCTGCTCTGCACACAGCAC +
Preference number: 4 (lower is better)
Translates to: VSHFETGPRRPSDLKALYLFHLE*LLCTQH
Trigger: GTGCTGTGTGCAGAGCAGGCACTCAAGATGAAAGAG...GTACAGTGCCTTCAAATCAGACGGCCTCCTTGGACCAGTTTCGAAGTGTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR GCA 90 bp GGATGCAGGACACCATACACAGCATTTCTGCTGCGAGCTTGGCGTTGCTCGGTTCCATTTCTAGCAGCTTaGCAGTATCTTCGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GCRTPYTAFLLRAWRCSVPFLAA*QYLRFP
Trigger: TGGAAACCGAAGATACTGGCAAGCTGCTAGAAATGG...AACCGAGCAACGCCAAGCTCGCAGCAGAAATGCTGTGTATGGTGTCCTGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR GCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTGCCTCAGGTTGTGCTaGAGCAGGGGCAGGCAGATA +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLCLRLC*SRGRQI
Trigger: TATCTGCCTGCCCCTGCTGCAGCACAACCTGAGGCA...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp CGAAGACTCCAGTGGACCATGAACCAAGGTAGGGCGCACGTTCTTCTTCGACTTGATGAACAACACCTTTaGGATCTTCCTCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RRLQWTMNQGRAHVLLRLDEQHL*DLPQQV
Trigger: GACCTGCTGAGGAAGATCGCAAAGGTGTTGTTCATC...AAGTCGAAGAAGAACGTGCGCCCTACCTTGGTTCATGGTCCACTGGAGTCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR GCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGTTCTGAAGGAAGTCTaGAAGCAGCTTCTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQVLKEV*KQLLEG
Trigger: TCCTTCGAGAAGCTGCTTGCAGACTTCCTTCAGAAC...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATTGTGGGGCACAAAGCTaGGCCCTGCACAGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYCGAQS*ALHRCA
Trigger: AGCGCACCTGTGCAGGGCCCAGCTTTGTGCCCCACA...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCTGGAGGGATGCCTTaGCCTTCTTCCTGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLSGGMP*PSSCWP
Trigger: CGGCCAACAGGAAGAAGGCCAAGGCATCCCTCCAGA...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTATAGGAAGAGGCACTTaGGGATGCCATCAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFIGRGT*GCHQSP
Trigger: CGGGCTTTGATGGCATCCCCAAGTGCCTCTTCCTAT...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGCAACCTCCTCATCACTaGGGAGTTGATGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQQPPHH*GVDVLQ
Trigger: TTGCAGAACATCAACTCCCCAGTGATGAGGAGGTTG...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GGCTGCAACTCAGAGAGTGGCTCATTCTTGGAGACCTGGGGTTTCTCGTCTTGGCTTTCTATTTCCAGGTaGGACAGGAAGGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: GCNSESGSFLETWGFSSWLSISR*DRKVSI
Trigger: AATGGAGACCTTCCTGTCCCACCTGGAAATAGAAAG...CCAAGACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCTCTGAGTTGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp ACTCAGAGAGTGGCTCATTCTTGGAGACCTGGGGTTTCTCGTCTTGGCTACCTGAACAGAAGGTACCTCTaGCCCTCTGAGCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: TQRVAHSWRPGVSRLGYLNRRYL*PSELSI
Trigger: GATAGAAAGCTCAGAGGGCCAGAGGTACCTTCTGTT...CAGGTAGCCAAGACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCTCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
3UTR CAA 72 bp CCTTCCTTCTTGGGTTCTGGCTCAAGGGCGTCTTCATaGGGTTTCATGGAGAGCAGAATCTCGATTGCCCAA +
Preference number: 4 (lower is better)
Translates to: PSFLGSGSRASS*GFMESRISIAQ
Trigger: TTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR TCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGAGCGCAACAGGATCATaGGACTATCAACCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQSATGS*DYQPFP
Trigger: TGGAAAAGGTTGATAGTCTCATGATCCTGTTGCGCT...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp CAGACCTCCACAGCTGCTCTGATATCTGATAGAGTCGAAGACTCCAGTGGACCAGGCGGTAGGTTATCTTaGTCTTGTCCCTGTAGATAC +
Preference number: 4 (lower is better)
Translates to: QTSTAALISDRVEDSSGPGGRLS*SCPCRY
Trigger: GTATCTACAGGGACAAGATCAAGATAACCTACCGCC...TGGTCCACTGGAGTCTTCGACTCTATCAGATATCAGAGCAGCTGTGGAGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR TCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGGTCGGCGTGGCTGTTaGAGAGCAGAGTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAGRRGC*RAECRV
Trigger: CACTCTACACTCTGCTCTTCAACAGCCACGCCGACC...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTTCTGCTTCGTGTCCTTaGCCTTTTCCTTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFSASCP*PFPSPS
Trigger: AGAGGGAGAAGGAAAAGGTCAAGGACACGAAGCAGA...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGAGCGCCTGGATTCTGTaGAATACTTCTTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQSAWIL*NTSSSS
Trigger: TGAGGAAGAAGAAGTATTTCACAGAATCCAGGCGCT...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGTCATCACTGGGGAGTTaGTGTTCTGCAAATCGTGAA +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQSSLGS*CSANRE
Trigger: TTCACGATTTGCAGAACATCAACTCCCCAGTGATGA...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTGTGTTAGCACCAAGTaGGGCAGGGTCCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLCVSTK*GRVLFR
Trigger: CCTGAAGAGGACCCTGCCTCACTTGGTGCTAACACA...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTTCTTGTCTTGCTGCCTaGGTCGCTGGTGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQASCLAA*VAGGAA
Trigger: TGCAGCTCCACCAGCGACTCAGGCAGCAAGACAAGA...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTTGCGCTCTGGCCCTCTaGGCTTTCTATCGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCCALAL*AFYRPL
Trigger: AAGCGGACGATAGAAAGCTCAGAGGGCCAGAGCGCA...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGCACACGATGGCTTGGTaGGGCAGACCATACAGAACC +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLHTMAW*GRPYRT
Trigger: GGTTCTGTATGGTCTGCCTCACCAAGCCATCGTGTG...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGTCAAACACGTCATGATTCTCCTAACTCCTaGCCAATTTCTGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: VSWRAESRLPNPGGQTRHDSPNS*PISAAR
Trigger: GCGCGCTGCAGAAATTGGGCAGGAGTTAGGAGAATC...ATGACGTGTTTGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS-3UTR GCA 90 bp TCTTCATTGGGTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGTCATCCACCAGCTCTTTCTaGCTCCCAGCCAAGATGAGA +
Preference number: 4 (lower is better)
Translates to: SSLGFMESRISIAQSRWSSTSSF*LPAKMR
Trigger: TCTCATCTTGGCTGGGAGGCAGAAAGAGCTGGTGGA...TGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS-3UTR GCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTACCATGAGCATAGCCTaGGCATGGTTCTTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTTMSIA*AWFFSL
Trigger: CAAGGAAAAGAACCATGCGCAGGCTATGCTCATGGT...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATGATCCAGGGCCTCCTTaGACACGAGCTGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYDPGPP*TRAAAG
Trigger: ACCTGCTGCAGCTCGTGTGCAAGGAGGCCCTGGATC...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCTCCTTCTTCATACTaGCTTCTCGCTCCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTPPSSY*LLAPPY
Trigger: ATAAGGAGGAGCGAGAAGGCAGTATGAAGAAGGAGG...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GGCTGCAACTCAGAGAGTGGCTCATTCTTGGAGACCTGGGGTTTCTCGTCTTGGATCATCTGGCATTCTTaGAGATTCATGGCTACCAGT +
Preference number: 4 (lower is better)
Translates to: GCNSESGSFLETWGFSSWIIWHS*RFMATS
Trigger: ACTGGTAGCCATGAATCTGCAAGAATGCCAGATGAT...CCAAGACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCTCTGAGTTGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp GGATGCAGGACACCATACACAGCATTTCTGCTGCGAGCTTGGCGTTGCTCGGTTGCAGTCACTGGCTATTaGCTCATTTTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: GCRTPYTAFLLRAWRCSVAVTGY*LIFQSQ
Trigger: CTGACTTTGAAAAATGAGCCAATAGCCAGTGACTGC...AACCGAGCAACGCCAAGCTCGCAGCAGAAATGCTGTGTATGGTGTCCTGCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGCCGGGCACTGTCTTTTaGGGTGGCTTTCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLPGTVF*GGFLCL
Trigger: CAGGCAAAGAAAGCCACCCCAAAAGACAGTGCCCGG...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTTTCCTTCTTGGGTTCTaGCTCAAGGGCGTCTTCATT +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTFLLGF*LKGVFI
Trigger: AATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAA...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTCCCACTCTCCTATGCTaGTGGGGATCTCATCCGGTG +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAPTLLC*WGSHPV
Trigger: CACCGGATGAGATCCCCACCAGCATAGGAGAGTGGG...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTTCCTGGAAAGCCCATTaGGCCTCAGACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCSWKAH*ASDRSS
Trigger: GCTGCTCCTGTCTGAGGCCCAATGGGCTTTCCAGGA...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGATCACCCACAGCTGTTaGCATCTGATTTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQITHSC*HLISAF
Trigger: GAAAGCAGAAATCAGATGCCAACAGCTGTGGGTGAT...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GGCTGCAACTCAGAGAGTGGCTCATTCTTGGAGACCTGGGGTTTCTCGTCTTGGAACTGTTTTTCCAAGTaGCTTGCCAATTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: GCNSESGSFLETWGFSSWNCFSK*LANCQQ
Trigger: CTGTTGGCAATTGGCAAGCCACTTGGAAAAACAGTT...CCAAGACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCTCTGAGTTGCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS-3UTR TCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGTTTGCAGACTTaGTCAGTTCATAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTPGLQT*SVHKLF
Trigger: GAAGAGCTTATGAACTGATCAAGTCTGCAAACCTGG...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATCAAACAGGTCCGGGCTaGAGCTCTCTGTGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYQTGPG*SSLWGQ
Trigger: TTGACCCCACAGAGAGCTTCAGCCCGGACCTGTTTG...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp TTTTACTCCTTCTGTCAAGGAAATCTGCAAGATGTGCTTGAAGAAGCTGTAGGCCAAACAGGTCCGGGCTaGAGCTCTCTGTGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: FYSFCQGNLQDVLEEAVGQTGPG*SSLWGQ
Trigger: TTGACCCCACAGAGAGCTTCAGCCCGGACCTGTTTG...GCCTACAGCTTCTTCAAGCACATCTTGCAGATTTCCTTGACAGAAGGAGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR TCA 90 bp ATCCAGAGGGAACTGCTTGTAATACATCCACTCGCTGAACTCCATGATGTAGTCCAGGCTCTTTCATCTTaGGTGCCTGCTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: IQRELLVIHPLAELHDVVQALSS*VPALHT
Trigger: TGTGTGCAGAGCAGGCACTCAAGATGAAAGAGCCTG...GACTACATCATGGAGTTCAGCGAGTGGATGTATTACAAGCAGTTCCCTCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR TCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGCCCTGGTCACGGAGCTaGTGTCTTCATTGGTACTCT +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLPWSRS*CLHWYS
Trigger: AGAGTACCAATGAAGACATCAGCTCCGTGACCAGGG...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATTGTAGGCGAAATGGGTaGGGCGTGTCAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYCRRNG*GVSGSA
Trigger: TGCAGACCCTGACACGCCTCACCCATTTCGCCTACA...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATACGACCTCAGGTGCTTaGGGCCCATCTGTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYTTSGA*GPSVWH
Trigger: ATGCCACACAGATGGGCCTCAAGCACCTGAGGTCGT...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTTCTGCAAGATGTGCTTaGAGAAGCTGTAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFSARCA*RSCRPS
Trigger: TGATGGCCTACAGCTTCTTCAAGCACATCTTGCAGA...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCGGGATGCTGAGCTCATaGAGGAACATCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLGMLSS*RNIFCR
Trigger: CCTGCAGAAGATGTTCCTTCATGAGCTCAGCATCCC...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATATGCTGCTGAGACTCTaGGTGCACAGGGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYMLLRL*VHRACS
Trigger: GGAGCAAGCCCTGTGCACTCAGAGTCTCAGCAGCAT...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp CGAAGACTCCAGTGGACCATGAACCAAGGTAGGGCGCACGTTCTTCTTCGACTTCTTTGTGGACCTCTTTaGTTTGACGTTGTCATAGAG +
Preference number: 4 (lower is better)
Translates to: RRLQWTMNQGRAHVLLRLLCGPL*FDVVIE
Trigger: CTCTATGACAACGTCAAAGCAAAGAGGTCCACAAAG...AAGTCGAAGAAGAACGTGCGCCCTACCTTGGTTCATGGTCCACTGGAGTCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR GCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCCACCAGCTCTTTCTaGCTCCCAGCCAAGATGAGA +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLSTSSF*LPAKMR
Trigger: TCTCATCTTGGCTGGGAGGCAGAAAGAGCTGGTGGA...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCTTCATTGGTACTCTaGTCATCGGTGCCTAGCCGC +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLSSLVL*SSVPSR
Trigger: GCGGCTAGGCACCGATGAGCAGAGTACCAATGAAGA...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTGCGGTACCACATGCTTaGCAAATAGCTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFAVPHA*QIAFLL
Trigger: GAGAAGGAAAGCTATTTGGCAAGCATGTGGTACCGC...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCAGTCACTCTTGTCTTaGTTGAACACATGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTQSLLS*LNTCSR
Trigger: TCTGCTGCATGTGTTCAAGCAAGACAAGAGTGACTG...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGGGAATCACGAGGTGGTaGTATCCAGGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLGITRW*YPGFRK
Trigger: CTTCCTGAAGCCTGGATACCACCACCTCGTGATTCC...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp TTTCTACAAAGGCCTTGGCTGCTGCTAGCCGTAGCTGCTTCCTGCCTTTCAAGTTCCCAATGGAAACTTTaGACTCATTCTCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: FLQRPWLLLAVAASCLSSSQWKL*THSRCP
Trigger: TGGACAGCGAGAATGAGTCCAAAGTTTCCATTGGGA...ACTTGAAAGGCAGGAAGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTGTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTTCATTCCGGTCGGCGTaGCTGTTGAAGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQASFRSA*LLKSRV
Trigger: CACTCTGCTCTTCAACAGCCACGCCGACCGGAATGA...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTACGGTTTTCGAGTTCTaGGCCAGGCGGTACCACATG +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQATVFEF*ARRYHM
Trigger: CATGTGGTACCGCCTGGCCCAGAACTCGAAAACCGT...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTCTTCGGAGGATAAGATaGCCTCAGCCAGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQALRRIR*PQPESG
Trigger: CCCTGACTCTGGCTGAGGCCATCTTATCCTCCGAAG...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTTTATCAGTTTCCCCTTaGGTGAAGGCATGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTLSVSP*VKAWSL
Trigger: CAAAGACCATGCCTTCACCCAAGGGGAAACTGATAA...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTCCAGACTCAGAAGGATaGCCGTCTGGATGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAPDSEG*PSGWAS
Trigger: TGAAGCCCATCCAGACGGCCATCCTTCTGAGTCTGG...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR TCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATGCTCGGCCCAAAAACTaGGTGATTGGCGCCTTCACT +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYARPKN*VIGAFT
Trigger: AGTGAAGGCGCCAATCACTCAGTTTTTGGGCCGAGC...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GTGAAGTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGGCTCGGCCCAAAAACTaGGTGATTGGCGCCTTCACT +
Preference number: 4 (lower is better)
Translates to: VKFCPSLAFTMTICLKIKARPKN*VIGAFT
Trigger: AGTGAAGGCGCCAATCACTCAGTTTTTGGGCCGAGC...CTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAACTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR TCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCATGGAGCCCTCAATaGCTTTCTTCTTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLSWSPQ*LSSSSL
Trigger: GAGGGAGGAAGAAGAAAGTCATTGAGGGCTCCATGA...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp TTTTACTCCTTCTGTCAAGGAAATCTGCAAGATGTGCTTGAAGAAGCTGTAGGCCAGCTGTACACCTTCTaGGCGCAGAAGGTGGACAGT +
Preference number: 4 (lower is better)
Translates to: FYSFCQGNLQDVLEEAVGQLYTF*AQKVDS
Trigger: ACTGTCCACCTTCTGCGCTCAGAAGGTGTACAGCTG...GCCTACAGCTTCTTCAAGCACATCTTGCAGATTTCCTTGACAGAAGGAGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS-3UTR GCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTTCTTCGCAGGGCAGTTaGATCTTGTTGATTCCGGGC +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQASSQGS*ILLIPG
Trigger: GCCCGGAATCAACAAGATGCAACTGCCCTGCGAAGA...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTAGTCGCATGGCCTTCTaGATATGCTCAATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCSRMAF*ICSMAG
Trigger: GCCTGCCATTGAGCATATGCAGAAGGCCATGCGACT...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATACATCCCACACATCTTaGTGCCAGGCAACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYTSHTS*CQATLA
Trigger: GGCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGT...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATGCTGACGGCCACTGGTaGAGAGGCAGGGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYADGHW*RGRVLS
Trigger: AGATAAAACCCTGCCTCTGCACCAGTGGCCGTCAGC...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATATGAGCACACCCAGCTaGAGGATTGGGATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYMSTPS*RIGMLS
Trigger: GCTCAGCATCCCAATCCTGCAGCTGGGTGTGCTCAT...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTTTCATGATGAGTTGCTaGGTAGTGCAACCTCAGATC +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFFMMSC*VVQPQI
Trigger: GATCTGAGGTTGCACTACGCAGCAACTCATCATGAA...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATTTCTCGAAGGAGCCCTaGTCCATCTGCAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYFSKEP*SICRSR
Trigger: CCTGGATCTGCAGATGGAGCAGGGCTCCTTCGAGAA...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTGAAGTCTGTATACACTaGAGCAATACCTCCGATGTC +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFEVCIH*SNTSDV
Trigger: GACATCGGAGGTATTGCTGCAGTGTATACAGACTTC...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTATCATCTGGCATTCTTaGAGATTCATGGCTACCAGT +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTIIWHS*RFMATS
Trigger: ACTGGTAGCCATGAATCTGCAAGAATGCCAGATGAT...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp CCATCATCACCAGGGAATTGCTGTTTGCCAGGCCCCCAAACCTGGCACTTTCTAACTTTGAAGTACATCTaGATGCAGTCTTCGCTTATC +
Preference number: 4 (lower is better)
Translates to: PSSPGNCCLPGPQTWHFLTLKYI*MQSSLI
Trigger: GATAAGCGAAGACTGCATCCAGATGTACTTCAAAGT...TAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CCA 90 bp GTGAAGTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGCCGGGCACTGTCTTTTaGGGTGGCTTTCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: VKFCPSLAFTMTICLKIKPGTVF*GGFLCL
Trigger: CAGGCAAAGAAAGCCACCCCAAAAGACAGTGCCCGG...CTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAACTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CCA 90 bp TTTTACTCCTTCTGTCAAGGAAATCTGCAAGATGTGCTTGAAGAAGCTGTAGGCCTGTCCAGCACAATCTaGAAGGTGTCGGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: FYSFCQGNLQDVLEEAVGLSSTI*KVSGAR
Trigger: TCTTGCCCCCGACACCTTCCAGATTGTGCTGGACAG...GCCTACAGCTTCTTCAAGCACATCTTGCAGATTTCCTTGACAGAAGGAGTAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCTCAGGAGGAATGGCCTaGTTGTTCAGCTGTACACCT +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLSGGMA*LFSCTP
Trigger: AGGTGTACAGCTGAACAACCAGGCCATTCCTCCTGA...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGAGGCGTCAGGAGGAATGGCCTaGTTGTTCAGCTGTACACCT +
Preference number: 4 (lower is better)
Translates to: VLPKLGLHNDHMFENQEASGGMA*LFSCTP
Trigger: AGGTGTACAGCTGAACAACCAGGCCATTCCTCCTGA...CGCCTCTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS-3UTR CCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCATGATGCTCAGGAAGTaGAATAGGGACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLMMLRK*NRDSTS
Trigger: GCTGGTGGAGTCCCTATTCCACTTCCTGAGCATCAT...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATAAAATCAAGAGGCGGTaGGCTGTCCTCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYKIKRR*AVLGST
Trigger: AGTGCTGCCGAGGACAGCCCACCGCCTCTTGATTTT...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGAGCATAGCCTGCGCATaGTTCTTTTCCTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLSIACA*FFSLLA
Trigger: GGCCAACAAGGAAAAGAACCATGCGCAGGCTATGCT...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATACCCGTGTCTGCCTCTaGAACCACTGGATACTCGTC +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYTRVCL*NHWILV
Trigger: GACGAGTATCCAGTGGTTCCAGAGGCAGACACGGGT...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTTGTCCTGCATCAGTGTaGGCCACTGGTTGTCGACAA +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCCPASV*ATGCRQ
Trigger: TTGTCGACAACCAGTGGCCCACACTGATGCAGGACA...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR TCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTTTCCACATTTTCCTCTaGCTGTGGGGCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAFHIFL*LWGTKL
Trigger: CAGCTTTGTGCCCCACAGTCAGAGGAAAATGTGGAA...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCGGCGGTAGGTTATCTTaGTCTTGTCCCTGTAGATAC +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLGGRLS*SCPCRY
Trigger: GTATCTACAGGGACAAGATCAAGATAACCTACCGCC...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTACGTGATCCACTCTaGATTGCTCTCTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAVRDPL*IALWWF
Trigger: GAACCACCAGAGAGCAATTCAGAGTGGATCACGTAC...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCCTCCACAGCTGCTCTaGTATCTGATAGAGTCGAAG +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCPPQLL*YLIESK
Trigger: CTTCGACTCTATCAGATATCAGAGCAGCTGTGGAGG...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCTGAATTTCCATGGTaGAGTTCTGCCCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLSEFPW*SSAQAW
Trigger: CCAAGCTTGGGCAGAACTTCACCATGGAAATTCAGA...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTGCAGGATTGGGATGCTaGGCTCATGAAGGAACATCT +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCAGLGC*AHEGTS
Trigger: AGATGTTCCTTCATGAGCTCAGCATCCCAATCCTGC...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGAGTATAATGGATTGCTaGTTGTCTTCCCTCAACATA +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQSIMDC*LSSLNI
Trigger: TATGTTGAGGGAAGACAAGCAGCAATCCATTATACT...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCTCTTTCATCTTGAGTaGCTGCTCTGCACACAGCAC +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCLFHLE*LLCTQH
Trigger: GTGCTGTGTGCAGAGCAGGCACTCAAGATGAAAGAG...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp AATCTGCAAGATGTGCTTGAAGAAGCTGTAGGCCATCAAGCAGTCATCTTCATAAGTCGCATGGCCTTCTaGATATGCTCAATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NLQDVLEEAVGHQAVIFISRMAF*ICSMAG
Trigger: GCCTGCCATTGAGCATATGCAGAAGGCCATGCGACT...TATGAAGATGACTGCTTGATGGCCTACAGCTTCTTCAAGCACATCTTGCAGATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR GCA 90 bp ATCCAGAGGGAACTGCTTGTAATACATCCACTCGCTGAACTCCATGATGTAGTCGATGAACAACACCTTTaGGATCTTCCTCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: IQRELLVIHPLAELHDVVDEQHL*DLPQQV
Trigger: GACCTGCTGAGGAAGATCGCAAAGGTGTTGTTCATC...GACTACATCATGGAGTTCAGCGAGTGGATGTATTACAAGCAGTTCCCTCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR GCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCTGTCCTGTGAATGCTaGAGAAAGAGGATCCGGAAC +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCLSCEC*RKRIRN
Trigger: GTTCCGGATCCTCTTTCTGCAGCATTCACAGGACAG...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGCTTTTGCAAAGTTTATaGCCTTCATGTACTGTGTCA +
Preference number: 4 (lower is better)
Translates to: GRSHREVELGIVASQRLQLLQSL*PSCTVS
Trigger: TGACACAGTACATGAAGGCCATAAACTTTGCAAAAG...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AAGTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGAGGGGAATCACGAGGTGGTaGTATCCAGGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KFCPSLAFTMTICLKIKRGITRW*YPGFRK
Trigger: CTTCCTGAAGCCTGGATACCACCACCTCGTGATTCC...CCTCTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTATTGGAGGCAGTCACTaGCTATTGGCTCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFIGGSH*LLAHFS
Trigger: TGAAAAATGAGCCAATAGCCAGTGACTGCCTCCAAT...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTAGTCCTCAGGAGGAATaGCCTGGTTGTTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCSPQEE*PGCSAV
Trigger: TACAGCTGAACAACCAGGCCATTCCTCCTGAGGACT...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTATGCTGATGATTCTCTaGAGGGATGCCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAMLMIL*RDALAF
Trigger: GAAGGCCAAGGCATCCCTCCAGAGAATCATCAGCAT...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTCTGCCAGTTGTTCTCTaGTTTCTGCAGTGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQALPVVL*FLQCLD
Trigger: ATCCAGGCACTGCAGAAACCAGAGAACAACTGGCAG...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATACCCAGCTGCAGGATTaGGATGCTGAGCTCATGAAG +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYTQLQD*DAELMK
Trigger: CTTCATGAGCTCAGCATCCCAATCCTGCAGCTGGGT...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTAGGTTGCAGGCAAATTaGATTCGAAGTTTCACACAC +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFRLQAN*IRSFTH
Trigger: GTGTGTGAAACTTCGAATCCAATTTGCCTGCAACCT...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCACTGGCAAACAGGCTaGTGGACATCTTGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCHWQTG*WTSCLA
Trigger: AGCAAGACAAGATGTCCACCAGCCTGTTTGCCAGTG...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTGTTTCTGCTCTACACTaGCAAACAGGCTGGTGGACA +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCVSALH*QTGWWT
Trigger: TGTCCACCAGCCTGTTTGCCAGTGTAGAGCAGAAAC...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATCCAGTCAGCCTGGCTTaGAAAGTTGTGGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYPVSLA*KVVVSQ
Trigger: CTGGGAAACCACAACTTTCCAAGCCAGGCTGACTGG...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTCTGCAACTCAGAGAGTaGCTCATTCTTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQALQLRE*LILGDL
Trigger: CAGGTCTCCAAGAATGAGCCACTCTCTGAGTTGCAG...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
3UTR CAA 72 bp GTTGTTCTCTGGTTTCTGCAGTGCCTGGATAGCATTTaGATAGCAGCTCAACTCTCCACAGACGGTTTTCGA +
Preference number: 4 (lower is better)
Translates to: VVLWFLQCLDSI*IAAQLSTDGFR
Trigger: TCGAAAACCGTCTGTGGAGAGTTGAGCTGCTATCAAAATGCTATCCAGGCACTGCAGAAACCAGAGAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR TCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTACAAGACCTGTCCTGTaGATGCTGCAGAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCTRPVL*MLQKED
Trigger: ATCCTCTTTCTGCAGCATTCACAGGACAGGTCTTGT...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGCAGATATTCCACTGTaGAGTACACAGCACGTGGAT +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAADIPL*STQHVD
Trigger: ATCCACGTGCTGTGTACTGCACAGTGGAATATCTGC...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTGATGAACAACACCTTTaGGATCTTCCTCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCDEQHL*DLPQQV
Trigger: GACCTGCTGAGGAAGATCGCAAAGGTGTTGTTCATC...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGCCTTTATTTTTCCCTaGATCACCCACAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAAFIFP*ITHSCW
Trigger: CCAACAGCTGTGGGTGATGCAGGGAAAAATAAAGGC...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTGGATGTGTAGTCAGTaGTGTTCTGAAGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLWMCSQ*CSEGSL
Trigger: CAGACTTCCTTCAGAACACCACTGACTACACATCCA...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATCGGTTCCACAGCATCTaGAGAGAGAAATCTCGTGAC +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYRFHSI*REKSRD
Trigger: GTCACGAGATTTCTCTCTCCAGATGCTGTGGAACCG...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATTTGGCGCCTTCACTTTaGAGTACATCTGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYLAPSL*STSGCS
Trigger: ACTGCATCCAGATGTACTTCAAAGTGAAGGCGCCAA...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGGTTCATGGCATACTGTaGCAAGTTTTCTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLVHGIL*QVFYPG
Trigger: ACCTGGATAGAAAACTTGTCACAGTATGCCATGAAC...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCTCGTCTTTTTCCTTCTaGGCACATAACCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLSSFSF*AHNLLI
Trigger: GATCAAGAGGTTATGTGCTCAGAAGGAAAAAGACGA...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCCTTTGTGGACCTCTTTaGTTTGACGTTGTCATAGAG +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLLCGPL*FDVVIE
Trigger: CTCTATGACAACGTCAAAGCAAAGAGGTCCACAAAG...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCTTGTTCTCTGGTTTCTaGAGTGCCTGGATAGCATTT +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLLFSGF*SAWIAF
Trigger: AAATGCTATCCAGGCACTGCAGAAACCAGAGAACAA...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATATGCAATCTCTTTTCTaGAGCTGGCCTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYMQSLF*SWPAPC
Trigger: ACATGGAGCAGGCCAGCTGCAGAAAAGAGATTGCAT...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCTTCTCTTTCTTAAATaGAATCTCTTTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGEESQRGRARDSGFTKTLLFLK*NLFSAA
Trigger: AGCTGCAGAAAAGAGATTGCATTTAAGAAAGAGAAG...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATGATCCAGGATGCCAATaGATTCCACCATCTCTATGC +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYDPGCQ*IPPSLC
Trigger: GCATAGAGATGGTGGAATGCATTGGCATCCTGGATC...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATAACACAGTGATGATTTaGGAGAGGCTGGGAATCACG +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYNTVMI*ERLGIT
Trigger: CGTGATTCCCAGCCTCTCCCAAATCATCACTGTGTT...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGGCAGTCACTGGCTATTaGCTCATTTTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLAVTGY*LIFQSQ
Trigger: CTGACTTTGAAAAATGAGCCAATAGCCAGTGACTGC...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTTCCCAATGGAAACTTTaGACTCATTCTCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQASQWKL*THSRCP
Trigger: TGGACAGCGAGAATGAGTCCAAAGTTTCCATTGGGA...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGTCAAACACGTCATGCATCCAGTTGTTCATaGCATACTGTGACAAGTTTT +
Preference number: 4 (lower is better)
Translates to: VSWRAESRLPNPGGQTRHASSCS*HTVTSF
Trigger: AAAACTTGTCACAGTATGCCATGAACAACTGGATGC...ATGACGTGTTTGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS-3UTR CCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCTTTCTATTTCCAGGTaGGACAGGAAGGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCLSISR*DRKVSI
Trigger: AATGGAGACCTTCCTGTCCCACCTGGAAATAGAAAG...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTAATAGGATCATCATCTaGCATTCTTGCAGATTCATG +
Preference number: 4 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFNRIII*HSCRFM
Trigger: CATGAATCTGCAAGAATGCCAGATGATGATCCTATT...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATTCATTCTTGGAGACCTaGGGTTTCTCGTCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYSFLET*GFSSWL
Trigger: TAGCCAAGACGAGAAACCCCAGGTCTCCAAGAATGA...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp GTGAAGTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGCAACATAAACACTTGTaGGTGTCCACACCCACTCTG +
Preference number: 4 (lower is better)
Translates to: VKFCPSLAFTMTICLKIKQHKHL*VSTPTL
Trigger: CAGAGTGGGTGTGGACACCCACAAGTGTTTATGTTG...CTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAACTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
3UTR CAA 72 bp TATACCCAGCAACAGCTGTCTTCTCAGGATTATGTATaGTGGACAGGACAGATATCAGGCTGTATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: YTQQQLSSQDYV*WTGQISGCIKA
Trigger: AGCCTTGATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCTGGGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR TCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATGTATCTATGAGTTTCTaGAACAGGCTGCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYVSMSF*NRLQTE
Trigger: CTCAGTCTGCAGCCTGTTTCAGAAACTCATAGATAC...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCGAGCACATAACCTCTTaGTCTTTGCATGATCTAGTT +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLEHITS*SLHDLV
Trigger: AACTAGATCATGCAAAGATCAAGAGGTTATGTGCTC...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGTCAAACACGTCATAGTATAATGGATTGCTaGTTGTCTTCCCTCAACATA +
Preference number: 4 (lower is better)
Translates to: VSWRAESRLPNPGGQTRHSIMDC*LSSLNI
Trigger: TATGTTGAGGGAAGACAAGCAGCAATCCATTATACT...ATGACGTGTTTGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR GCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATCCATTTCTAGCAGCTTaGCAGTATCTTCGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYPFLAA*QYLRFP
Trigger: TGGAAACCGAAGATACTGGCAAGCTGCTAGAAATGG...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCTCTGGTTTCTGCAGTaGCTGGATAGCATTTTGATA +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCLWFLQ*LDSILI
Trigger: TATCAAAATGCTATCCAGGCACTGCAGAAACCAGAG...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATTCTTGCTTGAACACATaGAGCAGATCTTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYSCLNT*SRSSEQ
Trigger: CTGCTCTGAAGATCTGCTGCATGTGTTCAAGCAAGA...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCACTTTGAAGTACATCTaGATGCAGTCTTCGCTTATC +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLTLKYI*MQSSLI
Trigger: GATAAGCGAAGACTGCATCCAGATGTACTTCAAAGT...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATTCTTCTGCAGGGCTTTaGCCAAATGGTCTATGTAGT +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYSSAGL*PNGLCS
Trigger: ACTACATAGACCATTTGGCCAAAGCCCTGCAGAAGA...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR TCA 90 bp CTAACCGCTTGCAAATTCTTTTCTGGAATTAGTTTTACTCCTTCTGTCAAGGAATTCCACATTTTCCTCTaGCTGTGGGGCACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LTACKFFSGISFTPSVKEFHIFL*LWGTKL
Trigger: CAGCTTTGTGCCCCACAGTCAGAGGAAAATGTGGAA...TTCCTTGACAGAAGGAGTAAAACTAATTCCAGAAAAGAATTTGCAAGCGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR GCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATCGACTTTCCCAGGTTTaGAGACTTGATCAGTTCATA +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYRLSQV*RLDQFI
Trigger: TATGAACTGATCAAGTCTGCAAACCTGGGAAAGTCG...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp GTGAAGTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGCGACTTTCCCAGGTTTaGAGACTTGATCAGTTCATA +
Preference number: 4 (lower is better)
Translates to: VKFCPSLAFTMTICLKIKRLSQV*RLDQFI
Trigger: TATGAACTGATCAAGTCTGCAAACCTGGGAAAGTCG...CTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAACTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR GCA 90 bp AAGTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGAGGCTTTGTGGACCTCTTTaGTTTGACGTTGTCATAGAG +
Preference number: 4 (lower is better)
Translates to: KFCPSLAFTMTICLKIKRLCGPL*FDVVIE
Trigger: CTCTATGACAACGTCAAAGCAAAGAGGTCCACAAAG...CCTCTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR GCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTTCTGTCAAGGAAATCTaGAAGATGTGCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCSVKEI*KMCLKK
Trigger: CTTCTTCAAGCACATCTTGCAGATTTCCTTGACAGA...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCTCAGCAAAAATGGGTaGTCGTTAAATTCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCLSKNG*SLNSSS
Trigger: TGACGAAGAATTTAACGAGCACCCATTTTTGCTGAG...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp AAGTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGAGGATTGGAGGCAGTCACTaGCTATTGGCTCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: KFCPSLAFTMTICLKIKRIGGSH*LLAHFS
Trigger: TGAAAAATGAGCCAATAGCCAGTGACTGCCTCCAAT...CCTCTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CCA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGCATCCAGTTGTTCATaGCATACTGTGACAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAASSCS*HTVTSF
Trigger: AAAACTTGTCACAGTATGCCATGAACAACTGGATGC...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCTTCTCTCAGCAAAAATaGGTGCTCGTTAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLFSQQK*VLVKFF
Trigger: GAAGAATTTAACGAGCACCCATTTTTGCTGAGAGAA...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATAACTGTTTTTCCAAGTaGCTTGCCAATTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYNCFSK*LANCQQ
Trigger: CTGTTGGCAATTGGCAAGCCACTTGGAAAAACAGTT...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR TCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATTCATCCTTGAACTTCTaGATTTCCATGGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYSSLNF*ISMVKF
Trigger: GAACTTCACCATGGAAATTCAGAAGTTCAAGGATGA...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR GCA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATGTTTTATCTGTCTCCTaGTTCTTGTTCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYVLSVS*FLFSVL
Trigger: CAAGACAGAGAACAAGAAGCAGGAGACAGATAAAAC...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCTTTCCTTCTCCTTTTTaGTCAATAGCAATTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLFPSPF*SIAIVN
Trigger: GTTCACAATTGCTATTGACCAAAAAGGAGAAGGAAA...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CCA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTAATAGGATCATCATCTaGCATTCTTGCAGATTCATG +
Preference number: 4 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCNRIII*HSCRFM
Trigger: CATGAATCTGCAAGAATGCCAGATGATGATCCTATT...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR TCA 90 bp CTAACCGCTTGCAAATTCTTTTCTGGAATTAGTTTTACTCCTTCTGTCAAGGAAGTTCATGGCATACTGTaGCAAGTTTTCTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: LTACKFFSGISFTPSVKEVHGIL*QVFYPG
Trigger: ACCTGGATAGAAAACTTGTCACAGTATGCCATGAAC...TTCCTTGACAGAAGGAGTAAAACTAATTCCAGAAAAGAATTTGCAAGCGGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS GCA 90 bp AGGCTGGTGGACATCTTGTCTTGCTGCCTGAGTCGCTGGTGGAGCTaGAGCAGGGCCGCCAGCTGTGAGCTGCCCGTGTTTTTCGTGGCC +
Preference number: 5 (lower is better)
Translates to: RLVDILSCCLSRWWS*SRAASCELPVFFVA
Trigger: GGCCACGAAAAACACGGGCAGCTCACAGCTGGCGGCCCTGCTGCAGCTCCACCAGCGACTCAGGCAGCAAGACAAGATGTCCACCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp TCCTGGAAAGCCCATTGGGCCTCAGACAGGAGCAGCCGGGCTGGTTaGTGCAGCTCCAGCTCCAGCAGGACCTCCCCTTTGAGCAACCAC +
Preference number: 5 (lower is better)
Translates to: SWKAHWASDRSSRAG*CSSSSSRTSPLSNH
Trigger: GTGGTTGCTCAAAGGGGAGGTCCTGCTGGAGCTGGAGCTGCACCAACCAGCCCGGCTGCTCCTGTCTGAGGCCCAATGGGCTTTCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp TGCACGTACAGCAGATGGAGAGCCTTCCCAGCCAGGATCAGGAGCTaGGCACGGATGTCCGTGCAGCCCACACACAGTGGCTGCAGACTC +
Preference number: 5 (lower is better)
Translates to: CTYSRWRAFPARIRS*ARMSVQPTHSGCRL
Trigger: GAGTCTGCAGCCACTGTGTGTGGGCTGCACGGACATCCGTGCCCAGCTCCTGATCCTGGCTGGGAAGGCTCTCCATCTGCTGTACGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp AGTGTGAGGTCGTCCTCGGCCCCTGGGAGGAACGGGATTTCAGGGCCTGTCCCTGACATCCCACACATCTaGCTGCCAGGCAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: SVRSSSAPGRNGISGPVPDIPHI*LPGNLG
Trigger: GCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGTC...AGGGACAGGCCCTGAAATCCCGTTCCTCCCAGGGGCCGAGGACGACCTCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS TCA 90 bp GCAGCAGGGCCGCCAGCTGTGAGCTGCCCGTGTTTTTCGTGGCCGTaGGCAGGACCTTCCGCATCATCTCTGAGGTTGAACAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: AAGPPAVSCPCFSWP*AGPSASSLRLNSSV
Trigger: CACAGAGCTGTTCAACCTCAGAGATGATGCGGAAGGTCCTGCTCACGGCCACGAAAAACACGGGCAGCTCACAGCTGGCGGCCCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp GCGATGTTGGTCAGCGGCTTCCGGAGGTGGTGCCTCAGGTTGTGCTaGAGCAGGGGCAGGCAGATATTCCACTGTGCAGTACACAGCACG +
Preference number: 5 (lower is better)
Translates to: AMLVSGFRRWCLRLC*SRGRQIFHCAVHST
Trigger: CGTGCTGTGTACTGCACAGTGGAATATCTGCCTGCCCCTGCTGCAGCACAACCTGAGGCACCACCTCCGGAAGCCGCTGACCAACATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CCA 90 bp GACTGGGCTTCTGAACAGATATCGCCTAGCTCCTGGAAAGCCCATTaGGCCTCAGACAGGAGCAGCCGGGCTGGTTGGTGCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: DWASEQISPSSWKAH*ASDRSSRAGWCSSS
Trigger: GCTGGAGCTGCACCAACCAGCCCGGCTGCTCCTGTCTGAGGCCCAATGGGCTTTCCAGGAGCTAGGCGATATCTGTTCAGAAGCCCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp GTCAGGGTGGACTTGTACCAGAACTCCTCGGCCCCGCCCAGCTGCTaGGCCCTCTCAACCATGAGCATAGCCTGCGCATGGTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: VRVDLYQNSSAPPSC*ALSTMSIACAWFFS
Trigger: GGAAAAGAACCATGCGCAGGCTATGCTCATGGTTGAGAGGGCCCAGCAGCTGGGCGGGGCCGAGGAGTTCTGGTACAAGTCCACCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp TTCTACGATCTTCGGAGGATAAGATGGCCTCAGCCAGAGTCAGGGTaGACTTGTACCAGAACTCCTCGGCCCCGCCCAGCTGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: FYDLRRIRWPQPESG*TCTRTPRPRPAAGP
Trigger: GGGCCCAGCAGCTGGGCGGGGCCGAGGAGTTCTGGTACAAGTCCACCCTGACTCTGGCTGAGGCCATCTTATCCTCCGAAGATCGTAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp GCAAACAGGCTGGTGGACATCTTGTCTTGCTGCCTGAGTCGCTGGTaGAGCTGCAGCAGGGCCGCCAGCTGTGAGCTGCCCGTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: ANRLVDILSCCLSRW*SCSRAASCELPVFF
Trigger: GAAAAACACGGGCAGCTCACAGCTGGCGGCCCTGCTGCAGCTCCACCAGCGACTCAGGCAGCAAGACAAGATGTCCACCAGCCTGTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp AGTGTGAGGTCGTCCTCGGCCCCTGGGAGGAACGGGATTTCAGGGCCTGTCCCTTCCGGGCACTGTCTTTaGGGGTGGCTTTCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: SVRSSSAPGRNGISGPVPSGHCL*GWLSLP
Trigger: AGGCAAAGAAAGCCACCCCAAAAGACAGTGCCCGGA...AGGGACAGGCCCTGAAATCCCGTTCCTCCCAGGGGCCGAGGACGACCTCACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 90 bp GCTGTCCAGCACAATCTGGAAGGTGTCGGGGGCAAGAGCCAGGCCTaGGTTCACCAGGATTGCACGCTTCTTCCGGGCACTGTCTTTTGG +
Preference number: 5 (lower is better)
Translates to: AVQHNLEGVGGKSQA*VHQDCTLLPGTVFW
Trigger: CCAAAAGACAGTGCCCGGAAGAAGCGTGCAATCCTGGTGAACGCAGGCCTGGCTCTTGCCCCCGACACCTTCCAGATTGTGCTGGACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 90 bp AGAGTCAGGGTGGACTTGTACCAGAACTCCTCGGCCCCGCCCAGCTaGTGGGCCCTCTCAACCATGAGCATAGCCTGCGCATGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: RVRVDLYQNSSAPPS*WALSTMSIACAWFF
Trigger: AAAGAACCATGCGCAGGCTATGCTCATGGTTGAGAGGGCCCAGCAGCTGGGCGGGGCCGAGGAGTTCTGGTACAAGTCCACCCTGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp TTCTGCTCTACACTGGCAAACAGGCTGGTGGACATCTTGTCTTGCTaGCTGAGTCGCTGGTGGAGCTGCAGCAGGGCCGCCAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: FCSTLANRLVDILSC*LSRWWSCSRAASCE
Trigger: CTCACAGCTGGCGGCCCTGCTGCAGCTCCACCAGCGACTCAGGCAGCAAGACAAGATGTCCACCAGCCTGTTTGCCAGTGTAGAGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp CAGCAGAAGGAAGGGTACACCGGATCTGTCTGCACGTACAGCAGATaGAGAGCCTTCCCAGCCAGGATCAGGAGCTGGGCACGGATGTCC +
Preference number: 5 (lower is better)
Translates to: QQKEGYTGSVCTYSR*RAFPARIRSWARMS
Trigger: GGACATCCGTGCCCAGCTCCTGATCCTGGCTGGGAAGGCTCTCCATCTGCTGTACGTGCAGACAGATCCGGTGTACCCTTCCTTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp TCGACAATGCTCTCGACCCCTACCAGACTCAGAAGGATGGCCGTCTaGATGGGCTTCACCAAGGACCGCTGTGATGCGCTCTGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: STMLSTPTRLRRMAV*MGFTKDRCDALWPS
Trigger: AGAGGGCCAGAGCGCATCACAGCGGTCCTTGGTGAAGCCCATCCAGACGGCCATCCTTCTGAGTCTGGTAGGGGTCGAGAGCATTGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GTCTGGGTGGGAATCCAGCTCATGATCAGGCCTCGAGCAAGGGCATTACAGAGCTGCTGCCAGGCAACCTaGGCCAGCTCCGCCCAAATC +
Preference number: 5 (lower is better)
Translates to: VWVGIQLMIRPRARALQSCCQAT*ASSAQI
Trigger: GATTTGGGCGGAGCTGGCCAAGGTTGCCTGGCAGCA...GCTCTGTAATGCCCTTGCTCGAGGCCTGATCATGAGCTGGATTCCCACCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 90 bp TCGGCCCCGCCCAGCTGCTGGGCCCTCTCAACCATGAGCATAGCCTaGGCATGGTTCTTTTCCTTGTTGGCCAACTCTGCTAGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: SAPPSCWALSTMSIA*AWFFSLLANSARSN
Trigger: GTTGCTTCTAGCAGAGTTGGCCAACAAGGAAAAGAACCATGCGCAGGCTATGCTCATGGTTGAGAGGGCCCAGCAGCTGGGCGGGGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp AGTTTCTGCTCTACACTGGCAAACAGGCTGGTGGACATCTTGTCTTaGTGCCTGAGTCGCTGGTGGAGCTGCAGCAGGGCCGCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: SFCSTLANRLVDILS*CLSRWWSCSRAASC
Trigger: ACAGCTGGCGGCCCTGCTGCAGCTCCACCAGCGACTCAGGCAGCAAGACAAGATGTCCACCAGCCTGTTTGCCAGTGTAGAGCAGAAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp GCCAACAGGTTGTCCCACAGGATGGTGGCCCTCAGCATGTTGTCCTaGATCAGTGTGGGCCACTGGTTGTCGACAATGCTCTCGACCCCT +
Preference number: 5 (lower is better)
Translates to: ANRLSHRMVALSMLS*ISVGHWLSTMLSTP
Trigger: AGGGGTCGAGAGCATTGTCGACAACCAGTGGCCCACACTGATGCAGGACAACATGCTGAGGGCCACCATCCTGTGGGACAACCTGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CCA 90 bp AGAAGCAACAGGGACTGGGCTTCTGAACAGATATCGCCTAGCTCCTaGAAAGCCCATTGGGCCTCAGACAGGAGCAGCCGGGCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: RSNRDWASEQISPSS*KAHWASDRSSRAGW
Trigger: CCAACCAGCCCGGCTGCTCCTGTCTGAGGCCCAATGGGCTTTCCAGGAGCTAGGCGATATCTGTTCAGAAGCCCAGTCCCTGTTGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp TCGACAATGCTCTCGACCCCTACCAGACTCAGAAGGATGGCCGTCTaGATGGGCTTCACCAAGGACCGCTGTGATGCGCCCTTCCCAATC +
Preference number: 5 (lower is better)
Translates to: STMLSTPTRLRRMAV*MGFTKDRCDAPFPI
Trigger: GATTGGGAAGGGCGCATCACAGCGGTCCTTGGTGAAGCCCATCCAGACGGCCATCCTTCTGAGTCTGGTAGGGGTCGAGAGCATTGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS-3UTR CAA 90 bp AGGCCTGCCCTTCCTTCTTGGGTTCTGGCTCAAGGGCGTCTTCATTGGGTTTCATGCTGCCAGGCAACCTaGGCCAGCTCCGCCCAAATC +
Preference number: 5 (lower is better)
Translates to: RPALPSWVLAQGRLHWVSCCQAT*ASSAQI
Trigger: GATTTGGGCGGAGCTGGCCAAGGTTGCCTGGCAGCA...TGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAGGGCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGTCTGCCAGGCTGAGCTaGAGGCGGGCCAACCTCCTC +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQSARLS*RRANLL
Trigger: GAGGAGGTTGGCCCGCCTCAAGCTCAGCCTGGCAGA...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS TCA 90 bp CTCCTTATGGAGACGGTTCCACAGCATCTGGAGAGAGAAATCTCGTaGCAGGGAGGTGACCTCGTTGAGCATGGAGAGCCCCTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LLMETVPQHLEREIS*QGGDLVEHGEPLQG
Trigger: CCCCTGGAGGGGCTCTCCATGCTCAACGAGGTCACCTCCCTGTCACGAGATTTCTCTCTCCAGATGCTGTGGAACCGTCTCCATAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp GCGCAGAAGGTGGACAGTGGCCTCAGCGCTGATGAACAACACCTTTaGGATCTTCCTCAGCAGGTCAGGGGGCATCTGCTTATGCATGGC +
Preference number: 5 (lower is better)
Translates to: AQKVDSGLSADEQHL*DLPQQVRGHLLMHG
Trigger: GCCATGCATAAGCAGATGCCCCCTGACCTGCTGAGGAAGATCGCAAAGGTGTTGTTCATCAGCGCTGAGGCCACTGTCCACCTTCTGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000155075.8
CDS GCA 90 bp AAGAGTTCCTCCTCCCAGCAGAAGGAAGGGTACACCGGATCTGTCTaGACGTACAGCAGATGGAGAGCCTTCCCAGCCAGGATCAGGAGC +
Preference number: 5 (lower is better)
Translates to: KSSSSQQKEGYTGSV*TYSRWRAFPARIRS
Trigger: GCTCCTGATCCTGGCTGGGAAGGCTCTCCATCTGCTGTACGTGCAGACAGATCCGGTGTACCCTTCCTTCTGCTGGGAGGAGGAACTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp GCAGGGGCAGGCAGATATTCCACTGTGCAGTACACAGCACGTGGATaGTCGTGGGGTTACCCAGACGAATGGCTCGCTGCAGGATGTTGT +
Preference number: 5 (lower is better)
Translates to: AGAGRYSTVQYTARG*SWGYPDEWLAAGCC
Trigger: ACAACATCCTGCAGCGAGCCATTCGTCTGGGTAACCCCACGACCATCCACGTGCTGTGTACTGCACAGTGGAATATCTGCCTGCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CCA 90 bp CCGCCCAGCTGCTGGGCCCTCTCAACCATGAGCATAGCCTGCGCATaGTTCTTTTCCTTGTTGGCCAACTCTGCTAGAAGCAACAGGGAC +
Preference number: 5 (lower is better)
Translates to: PPSCWALSTMSIACA*FFSLLANSARSNRD
Trigger: GTCCCTGTTGCTTCTAGCAGAGTTGGCCAACAAGGAAAAGAACCATGCGCAGGCTATGCTCATGGTTGAGAGGGCCCAGCAGCTGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp TGTCCCACAGGATGGTGGCCCTCAGCATGTTGTCCTGCATCAGTGTaGGCCACTGGTTGTCGACAATGCTCTCGACCCCTACCAGACTCA +
Preference number: 5 (lower is better)
Translates to: CPTGWWPSACCPASV*ATGCRQCSRPLPDS
Trigger: TGAGTCTGGTAGGGGTCGAGAGCATTGTCGACAACCAGTGGCCCACACTGATGCAGGACAACATGCTGAGGGCCACCATCCTGTGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CAA 90 bp GCTGCAACTCAGAGAGTGGCTCATTCTTGGAGACCTGGGGTTTCTCGTCTTGGCGCCTGGCTTGGAAAGTaGTGGTTTCCCAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: AATQRVAHSWRPGVSRLGAWLGK*WFPRCP
Trigger: GGGGCACCTGGGAAACCACAACTTTCCAAGCCAGGC...GCCAAGACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCTCTGAGTTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS-3UTR CAA 90 bp GCTGCAACTCAGAGAGTGGCTCATTCTTGGAGACCTGGGGTTTCTCGTCTTGGCGTGGCCCTCAGCATGTaGTCCTGCATCAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: AATQRVAHSWRPGVSRLGVALSM*SCISVG
Trigger: GCCCACACTGATGCAGGACAACATGCTGAGGGCCAC...GCCAAGACGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCTCTGAGTTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS TCA 90 bp GGGGCACAAAGCTGGGCCCTGCACAGGTGCGCTCGGCCCAAAAACTaGGTGATTGGCGCCTTCACTTTGAAGTACATCTGGATGCAGTCT +
Preference number: 5 (lower is better)
Translates to: GAQSWALHRCARPKN*VIGAFTLKYIWMQS
Trigger: AGACTGCATCCAGATGTACTTCAAAGTGAAGGCGCCAATCACTCAGTTTTTGGGCCGAGCGCACCTGTGCAGGGCCCAGCTTTGTGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS TCA 90 bp GCCCCGGGCCTCCTCGTAAGGGTCCACAACAAACTTGATGGTGTCTaGGTCGATCAGGTTGCATTCCGGTGGGATGATCCGGGTCATGAT +
Preference number: 5 (lower is better)
Translates to: APGLLVRVHNKLDGV*VDQVAFRWDDPGHD
Trigger: ATCATGACCCGGATCATCCCACCGGAATGCAACCTGATCGACTCAGACACCATCAAGTTTGTTGTGGACCCTTACGAGGAGGCCCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp CATCTGCCGGTACTTGTGGGGCACCTGGGTTCTGACGAATGGCGCTaGTGTCAAGCAGAACTTGGTAGCATCCTCCTTTCTTCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: HLPVLVGHLGSDEWR*CQAELGSILLSSGL
Trigger: CAAGCCGGAAGAAAGGAGGATGCTACCAAGTTCTGCTTGACAGCAGCGCCATTCGTCAGAACCCAGGTGCCCCACAAGTACCGGCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS GCA 90 bp AGGAGGCAAAATCGGGATGCCGTGCGACAGACATCCCACACATCTTaGTGCCAGGCAACCTTGGCCAGCTCCGCCCAAATCACAATTCTG +
Preference number: 5 (lower is better)
Translates to: RRQNRDAVRQTSHTS*CQATLASSAQITIL
Trigger: CAGAATTGTGATTTGGGCGGAGCTGGCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGTCTGTCGCACGGCATCCCGATTTTGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 90 bp AACACCTTTGCGATCTTCCTCAGCAGGTCAGGGGGCATCTGCTTATaGATGGCCATGTCAGAGGGAGCCCAGTCACTCATGGAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: NTFAIFLSRSGGICL*MAMSEGAQSLMEPS
Trigger: TGAGGGCTCCATGAGTGACTGGGCTCCCTCTGACATGGCCATGCATAAGCAGATGCCCCCTGACCTGCTGAGGAAGATCGCAAAGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 90 bp CATGCAGCAGATCTTCAGAGCAGGAGTAGGAGGCCCACTCTCCTATaGTGGTGGGGATCTCATCCGGTGGCTTGTTGGAAGCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: HAADLQSRSRRPTLL*WWGSHPVACWKLRL
Trigger: CAACCTCAGCTTCCAACAAGCCACCGGATGAGATCCCCACCAGCATAGGAGAGTGGGCCTCCTACTCCTGCTCTGAAGATCTGCTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp CTCGCCAGCACCATCCTTTTCTTCAGACCTTCAGCCTTTCGGCTTTaGTCCTTGGGGGCTTCCTTGAAGACTGCCGAGGAGGAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: LASTILFFRPSAFRL*SLGASLKTAEEEVS
Trigger: AGAGACCTCCTCCTCGGCAGTCTTCAAGGAAGCCCCCAAGGAGCAAAGCCGAAAGGCTGAAGGTCTGAAGAAAAGGATGGTGCTGGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp AGGATCCGGAACACGGGTGGGATCTCATTCAGGATGCTGAAATGCTaGTCTGTGACACAGAGGCTCTGCCATGCCCTGAAAGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: RIRNTGGISFRMLKC*SVTQRLCHALKEEA
Trigger: GGCCTCCTCTTTCAGGGCATGGCAGAGCCTCTGTGTCACAGAGCAGCATTTCAGCATCCTGAATGAGATCCCACCCGTGTTCCGGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp TCAGCATGTTGTCCTGCATCAGTGTGGGCCACTGGTTGTCGACAATaGTCTCGACCCCTACCAGACTCAGAAGGATGGCCGTCTGGATGG +
Preference number: 5 (lower is better)
Translates to: SACCPASVWATGCRQ*SRPLPDSEGWPSGW
Trigger: CCATCCAGACGGCCATCCTTCTGAGTCTGGTAGGGGTCGAGAGCATTGTCGACAACCAGTGGCCCACACTGATGCAGGACAACATGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CCA 90 bp GCAGCAGATCTTCAGAGCAGGAGTAGGAGGCCCACTCTCCTATGCTaGTGGGGATCTCATCCGGTGGCTTGTTGGAAGCTGAGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: AADLQSRSRRPTLLC*WGSHPVACWKLRLR
Trigger: TCTCAACCTCAGCTTCCAACAAGCCACCGGATGAGATCCCCACCAGCATAGGAGAGTGGGCCTCCTACTCCTGCTCTGAAGATCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp AAGAAGAAGCCTCTGCAGCTGTCCAGTAGCTGTTCCCAGTCAGCCTaGCTTGGAAAGTTGTGGTTTCCCAGGTGCCCCATCCAACGTCCG +
Preference number: 5 (lower is better)
Translates to: KKKPLQLSSSCSQSA*LGKLWFPRCPIQRP
Trigger: CGGACGTTGGATGGGGCACCTGGGAAACCACAACTTTCCAAGCCAGGCTGACTGGGAACAGCTACTGGACAGCTGCAGAGGCTTCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CCA 90 bp AGGATGGTGGCCCTCAGCATGTTGTCCTGCATCAGTGTGGGCCACTaGTTGTCGACAATGCTCTCGACCCCTACCAGACTCAGAAGGATG +
Preference number: 5 (lower is better)
Translates to: RMVALSMLSCISVGH*LSTMLSTPTRLRRM
Trigger: CATCCTTCTGAGTCTGGTAGGGGTCGAGAGCATTGTCGACAACCAGTGGCCCACACTGATGCAGGACAACATGCTGAGGGCCACCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CAA 90 bp GTCTGGGTGGGAATCCAGCTCATGATCAGGCCTCGAGCAAGGGCATTACAGAGCCTCTTCGCAGGGCAGTaGCATCTTGTTGATTCCGGG +
Preference number: 5 (lower is better)
Translates to: VWVGIQLMIRPRARALQSLFAGQ*HLVDSG
Trigger: CCCGGAATCAACAAGATGCAACTGCCCTGCGAAGAG...GCTCTGTAATGCCCTTGCTCGAGGCCTGATCATGAGCTGGATTCCCACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGTGCTGCAGTAGCTGCTaGGCCTTCACCCAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQCCSSC*AFTQVA
Trigger: TGCCACCTGGGTGAAGGCCAAGCAGCTACTGCAGCA...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGCCTGGCTTGGAAAGTaGTGGTTTCCCAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQAWLGK*WFPRCP
Trigger: GGGGCACCTGGGAAACCACAACTTTCCAAGCCAGGC...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS TCA 90 bp CCCACACACAGTGGCTGCAGACTCTCCAGCTGTGTTAGCACCAAGTaGGGCAGGGTCCTCTTCAGGAAGAACCATTGCAAGCCGATGGAT +
Preference number: 5 (lower is better)
Translates to: PTHSGCRLSSCVSTK*GRVLFRKNHCKPMD
Trigger: ATCCATCGGCTTGCAATGGTTCTTCCTGAAGAGGACCCTGCCTCACTTGGTGCTAACACAGCTGGAGAGTCTGCAGCCACTGTGTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp AGGCAAAATCGGGATGCCGTGCGACAGACATCCCACACATCTTGCTaGCAGGCAACCTTGGCCAGCTCCGCCCAAATCACAATTCTGTCT +
Preference number: 5 (lower is better)
Translates to: RQNRDAVRQTSHTSC*QATLASSAQITILS
Trigger: AGACAGAATTGTGATTTGGGCGGAGCTGGCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGTCTGTCGCACGGCATCCCGATTTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS CCA 90 bp GCAGATCTTCAGAGCAGGAGTAGGAGGCCCACTCTCCTATGCTGGTaGGGATCTCATCCGGTGGCTTGTTGGAAGCTGAGGTTGAGATCT +
Preference number: 5 (lower is better)
Translates to: ADLQSRSRRPTLLCW*GSHPVACWKLRLRS
Trigger: AGATCTCAACCTCAGCTTCCAACAAGCCACCGGATGAGATCCCCACCAGCATAGGAGAGTGGGCCTCCTACTCCTGCTCTGAAGATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp TTCCAAGTGGCTTGCCAATTGCCAACAGGTTGTCCCACAGGATGGTaGCCCTCAGCATGTTGTCCTGCATCAGTGTGGGCCACTGGTTGT +
Preference number: 5 (lower is better)
Translates to: FQVACQLPTGCPTGW*PSACCPASVWATGC
Trigger: ACAACCAGTGGCCCACACTGATGCAGGACAACATGCTGAGGGCCACCATCCTGTGGGACAACCTGTTGGCAATTGGCAAGCCACTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CAA 90 bp GCTCTCTGGTGGTTCAGGCACGTAGCCGGCTGGGTGTTGGCTCAAGTCCTCAGGACCTCGGTTCTCCTTTaGCAAAGTTTATGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: ALWWFRHVAGWVLAQVLRTSVLL*QSLWPS
Trigger: TGAAGGCCATAAACTTTGCAAAAGGAGAACCGAGGT...CCTGAGGACTTGAGCCAACACCCAGCCGGCTACGTGCCTGAACCACCAGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp AAGAGGCGGTGGGCTGTCCTCGGCAGCACTTGCACAGCCTCGTCCAGCACCTTAGGCAGTCACTGGCTATaGGCTCATTTTTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: KRRWAVLGSTCTASSSTLGSHWL*AHFSKS
Trigger: TGACTTTGAAAAATGAGCCAATAGCCAGTGACTGCC...TAAGGTGCTGGACGAGGCTGTGCAAGTGCTGCCGAGGACAGCCCACCGCCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGACATCCCACACATCTaGCTGCCAGGCAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQDIPHI*LPGNLG
Trigger: GCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGTC...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTAGCAGGACCTCCCCTTaGAGCAACCACAGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFSRTSP*SNHSWG
Trigger: CCCCCAGCTGTGGTTGCTCAAAGGGGAGGTCCTGCT...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCTCCTGGAAAGCCCATaGGGCCTCAGACAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SGEESQRGRARDSGFTKTLLESP*GLRQEQ
Trigger: CTGCTCCTGTCTGAGGCCCAATGGGCTTTCCAGGAG...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTAGGGAGGTGACCTCGTaGAGCATGGAGAGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFREVTS*SMESPS
Trigger: GGAGGGGCTCTCCATGCTCAACGAGGTCACCTCCCT...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS TCA 90 bp ACTGGTACAGCATGGTACCCAACTGCAGCCGGCGGTAGGTTATCTTaGTCTTGTCCCTGTAGATACCTAGGCTGTCCAGTCGCATGGCCT +
Preference number: 5 (lower is better)
Translates to: TGTAWYPTAAGGRLS*SCPCRYLGCPVAWP
Trigger: AGGCCATGCGACTGGACAGCCTAGGTATCTACAGGGACAAGATCAAGATAACCTACCGCCGGCTGCAGTTGGGTACCATGCTGTACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 90 bp ATGAACAACACCTTTGCGATCTTCCTCAGCAGGTCAGGGGGCATCTaGTTATGCATGGCCATGTCAGAGGGAGCCCAGTCACTCATGGAG +
Preference number: 5 (lower is better)
Translates to: MNNTFAIFLSRSGGI*LCMAMSEGAQSLME
Trigger: CTCCATGAGTGACTGGGCTCCCTCTGACATGGCCATGCATAAGCAGATGCCCCCTGACCTGCTGAGGAAGATCGCAAAGGTGTTGTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 90 bp AAGAGGATCCGGAACACGGGTGGGATCTCATTCAGGATGCTGAAATaGTGCTCTGTGACACAGAGGCTCTGCCATGCCCTGAAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: KRIRNTGGISFRMLK*CSVTQRLCHALKEE
Trigger: CTCCTCTTTCAGGGCATGGCAGAGCCTCTGTGTCACAGAGCAGCATTTCAGCATCCTGAATGAGATCCCACCCGTGTTCCGGATCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp CCAGGTGGGACAGGAAGGTCTCCATTCCATAGAAGAAGAAGCCTCTaGAGCTGTCCAGTAGCTGTTCCCAGTCAGCCTGGCTTGGAAAGT +
Preference number: 5 (lower is better)
Translates to: PGGTGRSPFHRRRSL*SCPVAVPSQPGLES
Trigger: ACTTTCCAAGCCAGGCTGACTGGGAACAGCTACTGGACAGCTGCAGAGGCTTCTTCTTCTATGGAATGGAGACCTTCCTGTCCCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CCA 90 bp TTCCCAATGGAAACTTTGGACTCATTCTCGCTGTCCAGCACAATCTaGAAGGTGTCGGGGGCAAGAGCCAGGCCTGCGTTCACCAGGATT +
Preference number: 5 (lower is better)
Translates to: FPMETLDSFSLSSTI*KVSGARARPAFTRI
Trigger: AATCCTGGTGAACGCAGGCCTGGCTCTTGCCCCCGACACCTTCCAGATTGTGCTGGACAGCGAGAATGAGTCCAAAGTTTCCATTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS CCA 90 bp GGAATGGCCTGGTTGTTCAGCTGTACACCTTCTGAGCGCAGAAGGTaGACAGTGGCCTCAGCGCTGATGAACAACACCTTTGCGATCTTC +
Preference number: 5 (lower is better)
Translates to: GMAWLFSCTPSERRR*TVASALMNNTFAIF
Trigger: GAAGATCGCAAAGGTGTTGTTCATCAGCGCTGAGGCCACTGTCCACCTTCTGCGCTCAGAAGGTGTACAGCTGAACAACCAGGCCATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000155075.8
CDS CCA 90 bp TTTTTCCAAGTGGCTTGCCAATTGCCAACAGGTTGTCCCACAGGATaGTGGCCCTCAGCATGTTGTCCTGCATCAGTGTGGGCCACTGGT +
Preference number: 5 (lower is better)
Translates to: FFQVACQLPTGCPTG*WPSACCPASVWATG
Trigger: ACCAGTGGCCCACACTGATGCAGGACAACATGCTGAGGGCCACCATCCTGTGGGACAACCTGTTGGCAATTGGCAAGCCACTTGGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CAA 90 bp TGGGAGCCATGTGTTCCAGTAGTGCCGGGCGGCCATCATCACCAGGGAATTGCTTCCATTTCTAGCAGCTaGCCAGTATCTTCGGTTTCC +
Preference number: 5 (lower is better)
Translates to: WEPCVPVVPGGHHHQGIASISSS*PVSSVS
Trigger: GGAAACCGAAGATACTGGCAAGCTGCTAGAAATGGA...AGCAATTCCCTGGTGATGATGGCCGCCCGGCACTACTGGAACACATGGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp AGGCCTGCCCTTCCTTCTTGGGTTCTGGCTCAAGGGCGTCTTCATTGGGTTTCACATCTCCATGTGCACTaGGCAGCGCAACAGGATCAT +
Preference number: 5 (lower is better)
Translates to: RPALPSWVLAQGRLHWVSHLHVH*AAQQDH
Trigger: ATGATCCTGTTGCGCTGCCAAGTGCACATGGAGATG...TGAAACCCAATGAAGACGCCCTTGAGCCAGAACCCAAGAAGGAAGGGCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp CCATCATCACCAGGGAATTGCTGTTTGCCAGGCCCCCAAACCTGGCACTTTCTATCCGGGCACTGTCTTTaGGGGTGGCTTTCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: PSSPGNCCLPGPQTWHFLSGHCL*GWLSLP
Trigger: AGGCAAAGAAAGCCACCCCAAAAGACAGTGCCCGGA...TAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CAA 90 bp GAGTGTGAGGTCGTCCTCGGCCCCTGGGAGGAACGGGATTTCAGGGCCTGTCCCATCACAATTCTGTCTTaGTCATTCTCATATCCCAGA +
Preference number: 5 (lower is better)
Translates to: ECEVVLGPWEERDFRACPITILS*SFSYPR
Trigger: TCTGGGATATGAGAATGACAAAGACAGAATTGTGAT...GGGACAGGCCCTGAAATCCCGTTCCTCCCAGGGGCCGAGGACGACCTCACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGAGAGTGGCTCATTCTaGGAGACCTGGGGTTTCTCG +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQESGSF*ETWGFS
Trigger: CGAGAAACCCCAGGTCTCCAAGAATGAGCCACTCTC...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp GGACCTCTTTGCTTTGACGTTGTCATAGAGGAGGCAAAATCGGGATaGCGTGCGACAGACATCCCACACATCTTGCTGCCAGGCAACCTT +
Preference number: 5 (lower is better)
Translates to: GPLCFDVVIEEAKSG*RATDIPHILLPGNL
Trigger: AAGGTTGCCTGGCAGCAAGATGTGTGGGATGTCTGTCGCACGGCATCCCGATTTTGCCTCCTCTATGACAACGTCAAAGCAAAGAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 90 bp TTGCAAGCCGATGGATGTGTAGTCAGTGGTGTTCTGAAGGAAGTCTaGAAGCAGCTTCTCGAAGGAGCCCTGCTCCATCTGCAGATCCAG +
Preference number: 5 (lower is better)
Translates to: LQADGCVVSGVLKEV*KQLLEGALLHLQIQ
Trigger: CTGGATCTGCAGATGGAGCAGGGCTCCTTCGAGAAGCTGCTTGCAGACTTCCTTCAGAACACCACTGACTACACATCCATCGGCTTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp AGCTGTTCCCAGTCAGCCTGGCTTGGAAAGTTGTGGTTTCCCAGGTaGCCCATCCAACGTCCGGTAAAAGTGTCTCGGTACTTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: SCSQSAWLGKLWFPR*PIQRPVKVSRYFSK
Trigger: CTTGGAAAAGTACCGAGACACTTTTACCGGACGTTGGATGGGGCACCTGGGAAACCACAACTTTCCAAGCCAGGCTGACTGGGAACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp AAGCTGGGCCCTGCACAGGTGCGCTCGGCCCAAAAACTGAGTGATTaGCGCCTTCACTTTGAAGTACATCTGGATGCAGTCTTCGCTTAT +
Preference number: 5 (lower is better)
Translates to: KLGPAQVRSAQKLSD*RLHFEVHLDAVFAY
Trigger: ATAAGCGAAGACTGCATCCAGATGTACTTCAAAGTGAAGGCGCCAATCACTCAGTTTTTGGGCCGAGCGCACCTGTGCAGGGCCCAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS CCA 90 bp AGATACCTAGGCTGTCCAGTCGCATGGCCTTCTGCATATGCTCAATaGCAGGCTCCACCCGGTCATCATCCTGCTCAATATAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: RYLGCPVAWPSAYAQ*QAPPGHHPAQYRPS
Trigger: AGATGGCCTATATTGAGCAGGATGATGACCGGGTGGAGCCTGCCATTGAGCATATGCAGAAGGCCATGCGACTGGACAGCCTAGGTATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CCA 90 bp ATACTGCCTTCTCGCTCCTCCTTATGGAGACGGTTCCACAGCATCTaGAGAGAGAAATCTCGTGACAGGGAGGTGACCTCGTTGAGCATG +
Preference number: 5 (lower is better)
Translates to: ILPSRSSLWRRFHSI*REKSRDREVTSLSM
Trigger: CATGCTCAACGAGGTCACCTCCCTGTCACGAGATTTCTCTCTCCAGATGCTGTGGAACCGTCTCCATAAGGAGGAGCGAGAAGGCAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CTGGCTCAAGGGCGTCTTCATTGGGTTTCATGGAGAGCAGAATCTCGATTGCCCTCAGGCTCTTTCATCTaGAGTGCCTGCTCTGCACAC +
Preference number: 5 (lower is better)
Translates to: LAQGRLHWVSWRAESRLPSGSFI*SACSAH
Trigger: GTGTGCAGAGCAGGCACTCAAGATGAAAGAGCCTGA...GGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGACGCCCTTGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp CATCATCACCAGGGAATTGCTGTTTGCCAGGCCCCCAAACCTGGCACTTTCTACATGGCCATAGTGGCCTaGTCTTCAGGACGATCAGGA +
Preference number: 5 (lower is better)
Translates to: HHHQGIAVCQAPKPGTFYMAIVA*SSGRSG
Trigger: TCCTGATCGTCCTGAAGACAAGGCCACTATGGCCAT...GTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGGTGATGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CAA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCTGCTGCCAGGCAACCTaGGCCAGCTCCGCCCAAATC +
Preference number: 5 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLCCQAT*ASSAQI
Trigger: GATTTGGGCGGAGCTGGCCAAGGTTGCCTGGCAGCA...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGAGGAATGGCCTGGTaGTTCAGCTGTACACCTTCT +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQGGMAW*FSCTPS
Trigger: AGAAGGTGTACAGCTGAACAACCAGGCCATTCCTCC...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGTCATCCGGTGGCTTGTaGGAAGCTGAGGTTGAGATC +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQSSGGL*EAEVEI
Trigger: GATCTCAACCTCAGCTTCCAACAAGCCACCGGATGA...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATGAGCAGCCGGGCTGGTaGGTGCAGCTCCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYEQPGW*VQLQLQ
Trigger: CTGGAGCTGGAGCTGCACCAACCAGCCCGGCTGCTC...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGCAAGTGGCTTGCCAATaGCCAACAGGTTGTCCCACA +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQQVACQ*PTGCPT
Trigger: TGTGGGACAACCTGTTGGCAATTGGCAAGCCACTTG...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS TCA 90 bp CTGAGGTTGAACAGCTCTGTGACAGTGTTAGGAACTGGCAGGTGGTaGTGGGATCCAGGATGCCAATGCATTCCACCATCTCTATGCTGG +
Preference number: 5 (lower is better)
Translates to: LRLNSSVTVLGTGRW*WDPGCQCIPPSLCW
Trigger: CCAGCATAGAGATGGTGGAATGCATTGGCATCCTGGATCCCATCACCACCTGCCAGTTCCTAACACTGTCACAGAGCTGTTCAACCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp GTGTCCAGCAGCTTTGTCCACAGAGAGGATGTGATGTCGAGCTTTTaGACAGAGGTAGGTGAAGCGGCCCTTGATCTTCCCAATGGAAAC +
Preference number: 5 (lower is better)
Translates to: VSSSFVHREDVMSSF*TEVGEAALDLPNGN
Trigger: GTTTCCATTGGGAAGATCAAGGGCCGCTTCACCTACCTCTGTGCAAAAGCTCGACATCACATCCTCTCTGTGGACAAAGCTGCTGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 90 bp ATTCAGGATGCTGAAATGCTGCTCTGTGACACAGAGGCTCTGCCATaGCCTGAAAGAGGAGGCCAGTTTCTGCTCTACACTGGCAAACAG +
Preference number: 5 (lower is better)
Translates to: IQDAEMLLCDTEALP*PERGGQFLLYTGKQ
Trigger: CTGTTTGCCAGTGTAGAGCAGAAACTGGCCTCCTCTTTCAGGGCATGGCAGAGCCTCTGTGTCACAGAGCAGCATTTCAGCATCCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp TTCAAAGGCTACAAAGCCTACCTCAGCGCTGATGAACAACACCTTTaGGATCTTCCTCAGCAGGTCAGGGGGCATCTGCTTATGCATGGC +
Preference number: 5 (lower is better)
Translates to: FKGYKAYLSADEQHL*DLPQQVRGHLLMHG
Trigger: GCCATGCATAAGCAGATGCCCCCTGACCTGCTGAGGAAGATCGCAAAGGTGTTGTTCATCAGCGCTGAGGTAGGCTTTGTAGCCTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS CCA 90 bp GGCTGCAGACTGAGATTTCTTTTCTACGATCTTCGGAGGATAAGATaGCCTCAGCCAGAGTCAGGGTGGACTTGTACCAGAACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: GCRLRFLFYDLRRIR*PQPESGWTCTRTPR
Trigger: CCGAGGAGTTCTGGTACAAGTCCACCCTGACTCTGGCTGAGGCCATCTTATCCTCCGAAGATCGTAGAAAAGAAATCTCAGTCTGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GGATGCAGGACACCATACACAGCATTTCTGCTGCGAGCTTGGCGTTGCTCGGTTGCTGTCAAGCAGAACTaGGTAGCATCCTCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: GCRTPYTAFLLRAWRCSVAVKQN*VASSFL
Trigger: AAGAAAGGAGGATGCTACCAAGTTCTGCTTGACAGC...AACCGAGCAACGCCAAGCTCGCAGCAGAAATGCTGTGTATGGTGTCCTGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGCCAGGGAATTGCTGTTaGCCAGGCCCCCAAACCTGG +
Preference number: 5 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLPGNCC*PGPQTW
Trigger: CCAGGTTTGGGGGCCTGGCAAACAGCAATTCCCTGG...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCGTGGCCCTCAGCATGTaGTCCTGCATCAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLVALSM*SCISVG
Trigger: GCCCACACTGATGCAGGACAACATGCTGAGGGCCAC...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CAA 90 bp CGAAGACTCCAGTGGACCATGAACCAAGGTAGGGCGCACGTTCTTCTTCGACTTCTCCAACATAAACACTaGTGGGTGTCCACACCCACT +
Preference number: 5 (lower is better)
Translates to: RRLQWTMNQGRAHVLLRLLQHKH*WVSTPT
Trigger: AGTGGGTGTGGACACCCACAAGTGTTTATGTTGGAG...AAGTCGAAGAAGAACGTGCGCCCTACCTTGGTTCATGGTCCACTGGAGTCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS CCA 90 bp TGGTTCTTTTCCTTGTTGGCCAACTCTGCTAGAAGCAACAGGGACTaGGCTTCTGAACAGATATCGCCTAGCTCCTGGAAAGCCCATTGG +
Preference number: 5 (lower is better)
Translates to: WFFSLLANSARSNRD*ASEQISPSSWKAHW
Trigger: CCAATGGGCTTTCCAGGAGCTAGGCGATATCTGTTCAGAAGCCCAGTCCCTGTTGCTTCTAGCAGAGTTGGCCAACAAGGAAAAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 90 bp TCCTCTTCAGGAAGAACCATTGCAAGCCGATGGATGTGTAGTCAGTaGTGTTCTGAAGGAAGTCTGCAAGCAGCTTCTCGAAGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: SSSGRTIASRWMCSQ*CSEGSLQAASRRSP
Trigger: AGGGCTCCTTCGAGAAGCTGCTTGCAGACTTCCTTCAGAACACCACTGACTACACATCCATCGGCTTGCAATGGTTCTTCCTGAAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTCATCTCCATGTGCACTaGGCAGCGCAACAGGATCAT +
Preference number: 5 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFHLHVH*AAQQDH
Trigger: ATGATCCTGTTGCGCTGCCAAGTGCACATGGAGATG...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CAAAGGCCTTGGCTGCTGCTAGCCGTAGCTGCTTCCTGCCTTTCAAGTTTTCCATTCCCAATGGAAACTTaGGACTCATTCTCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: QRPWLLLAVAASCLSSFPFPMET*DSFSLS
Trigger: GGACAGCGAGAATGAGTCCAAAGTTTCCATTGGGAA...TGGAAAACTTGAAAGGCAGGAAGCAGCTACGGCTAGCAGCAGCCAAGGCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGATCGTGCAGTCACTCTaGTCTTGCTTGAACACATGC +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQIVQSL*SCLNTC
Trigger: GCATGTGTTCAAGCAAGACAAGAGTGACTGCACGAT...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGAGAGTCAGGGTGGACTaGTACCAGAACTCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLRVRVD*YQNSSA
Trigger: GGCCGAGGAGTTCTGGTACAAGTCCACCCTGACTCT...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGCATCATCTGGCATTCTaGCAGATTCATGGCTACCAG +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQHHLAF*QIHGYQ
Trigger: CTGGTAGCCATGAATCTGCAAGAATGCCAGATGATG...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS GCA 90 bp AGGAGGAACTTGTCCACAATCAGGATCAGGTACTCAGGGTCAGGCTaGCCTGAAGGGAGAGAGATTTTCCTTTCCTTCTCTCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: RRNLSTIRIRYSGSG*PEGREIFLSFSLPL
Trigger: TAAAGGCAGAGAGAAGGAAAGGAAAATCTCTCTCCCTTCAGGGCAGCCTGACCCTGAGTACCTGATCCTGATTGTGGACAAGTTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCATAACGAACCATGGTaGAGAACATCTGCCGGTACT +
Preference number: 5 (lower is better)
Translates to: SGEESQRGRARDSGFTKTHNEPW*RTSAGT
Trigger: AGTACCGGCAGATGTTCTCAACCATGGTTCGTTATG...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGAGAGTATAATGGATaGCTGCTTGTCTTCCCTCAA +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQGEYNG*LLVFPQ
Trigger: TTGAGGGAAGACAAGCAGCAATCCATTATACTCTCC...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCCGGGCACTGTCTTTaGGGGTGGCTTTCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLSGHCL*GWLSLP
Trigger: AGGCAAAGAAAGCCACCCCAAAAGACAGTGCCCGGA...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CGCATCCAGTTGTTCATGGCATACTGTGACAAGTTTTCTATCCAGGTTCTGTACGACATCCCACACATCTaGCTGCCAGGCAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: RIQLFMAYCDKFSIQVLYDIPHI*LPGNLG
Trigger: GCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGTC...GTACAGAACCTGGATAGAAAACTTGTCACAGTATGCCATGAACAACTGGATGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTAACGACCTCAGGTGCTaGAGGCCCATCTGTGTGGCA +
Preference number: 5 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQANDLRC*RPICVA
Trigger: TGCCACACAGATGGGCCTCAAGCACCTGAGGTCGTT...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATCTCTGGAGGGATGCCTaGGCCTTCTTCCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYLWRDA*AFFLLA
Trigger: GGCCAACAGGAAGAAGGCCAAGGCATCCCTCCAGAG...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTTCAGCCTTTCGGCTTaGCTCCTTGGGGGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLFSLSA*LLGGFL
Trigger: AAGGAAGCCCCCAAGGAGCAAAGCCGAAAGGCTGAA...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCCCATACAGAACCCAGTaGAGGGCAGTGGTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLPYRTQ*RAVVSD
Trigger: GTCACTCACCACTGCCCTCAACTGGGTTCTGTATGG...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS TCA 90 bp CAATATAGGCCATCTCCATGTGCACTTGGCAGCGCAACAGGATCATaGGACTATCAACCTTTTCCAGAATCTCAGCGATGTTGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: QYRPSPCALGSATGS*DYQPFPESQRCWSA
Trigger: CGCTGACCAACATCGCTGAGATTCTGGAAAAGGTTGATAGTCTCATGATCCTGTTGCGCTGCCAAGTGCACATGGAGATGGCCTATATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTACCTCGGTTCTCCTTTaGCAAAGTTTATGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: SGEESQRGRARDSGFTKTTSVLL*QSLWPS
Trigger: TGAAGGCCATAAACTTTGCAAAAGGAGAACCGAGGT...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCTCTTCGCAGGGCAGTaGCATCTTGTTGATTCCGGG +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCLFAGQ*HLVDSG
Trigger: CCCGGAATCAACAAGATGCAACTGCCCTGCGAAGAG...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp ATCCAGAGGGAACTGCTTGTAATACATCCACTCGCTGAACTCCATGATGTAGTCGGAGGAATGGCCTGGTaGTTCAGCTGTACACCTTCT +
Preference number: 5 (lower is better)
Translates to: IQRELLVIHPLAELHDVVGGMAW*FSCTPS
Trigger: AGAAGGTGTACAGCTGAACAACCAGGCCATTCCTCC...GACTACATCATGGAGTTCAGCGAGTGGATGTATTACAAGCAGTTCCCTCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATGAGGCCCAGCCCATaGCACGAGTACATCTCAAGG +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCMRPSP*HEYISR
Trigger: CCTTGAGATGTACTCGTGCAATGGGCTGGGCCTCAT...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTTCTGTCTCCTGCTTCTaGTTCTCTGTCTTGTTGATG +
Preference number: 5 (lower is better)
Translates to: SGEESQRGRARDSGFTKTSVSCF*FSVLLM
Trigger: CATCAACAAGACAGAGAACAAGAAGCAGGAGACAGA...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCATAGGAAGAGGCACTaGGGGATGCCATCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCHRKRH*GMPSKP
Trigger: GGGCTTTGATGGCATCCCCAAGTGCCTCTTCCTATG...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTGCATGGTTCTTTTCCTaGTTGGCCAACTCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFAWFFS*LANSAR
Trigger: TCTAGCAGAGTTGGCCAACAAGGAAAAGAACCATGC...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGTTTAAGTCCTTGCTCTaGACCTCCTTCTTCATACTG +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQFKSLL*TSFFIL
Trigger: CAGTATGAAGAAGGAGGTCAAGAGCAAGGACTTAAA...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGTTCTTCTTTAAGTCCTaGCTCTTGACCTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GRSHREVELGIVASQRLQFFFKS*LLTSFF
Trigger: GAAGAAGGAGGTCAAGAGCAAGGACTTAAAGAAGAA...CTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTCCAGGGTTTGTTTTTCCAAGTGGCTaGCCAATTGCCAACAGGTTG +
Preference number: 5 (lower is better)
Translates to: ESQRGRARDSGFTKTPGFVFPSG*PIANRL
Trigger: CAACCTGTTGGCAATTGGCAAGCCACTTGGAAAAAC...AAACCCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CAA 90 bp TCTTCATTGGGTTTCATGGAGAGCAGAATCTCGATTGCCCAATCCAGGTGGTCACATTTTCCTCAGGATTaGCTCCAGGTTTTCCGGCAA +
Preference number: 5 (lower is better)
Translates to: SSLGFMESRISIAQSRWSHFPQD*LQVFRQ
Trigger: TTGCCGGAAAACCTGGAGCAAATCCTGAGGAAAATG...TGACCACCTGGATTGGGCAATCGAGATTCTGCTCTCCATGAAACCCAATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTATGGCCATAGTGGCCTaGTCTTCAGGACGATCAGGA +
Preference number: 5 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAMAIVA*SSGRSG
Trigger: TCCTGATCGTCCTGAAGACAAGGCCACTATGGCCAT...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp TGTTTGCCAGGCCCCCAAACCTGGCACTTTCTACAAAGGCCTTGGCTGCTGCTAATCACAATTCTGTCTTaGTCATTCTCATATCCCAGA +
Preference number: 5 (lower is better)
Translates to: CLPGPQTWHFLQRPWLLLITILS*SFSYPR
Trigger: TCTGGGATATGAGAATGACAAAGACAGAATTGTGAT...TAGCAGCAGCCAAGGCCTTTGTAGAAAGTGCCAGGTTTGGGGGCCTGGCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CAA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTACAATGACCATATGTTaGAAAATCAAGAGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: SGEESQRGRARDSGFTKTTMTIC*KIKRRW
Trigger: CCACCGCCTCTTGATTTTCAAACATATGGTCATTGT...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGATCTGCTTCGTGTCCTaGACCTTTTCCTTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: ATAVFSGLCIVDRTDIRLICFVS*TFSFSL
Trigger: GAGGGAGAAGGAAAAGGTCAAGGACACGAAGCAGAT...CAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATCTCATCCGGTGGCTaGTTGGAAGCTGAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCISSGG*LEAEVE
Trigger: CTCAACCTCAGCTTCCAACAAGCCACCGGATGAGAT...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS TCA 90 bp TTCGGCCTTTCGTTCTGGAGGGCCCTGAAAGTATCTATGAGTTTCTaGAACAGGCTGCAGACTGAGATTTCTTTTCTACGATCTTCGGAG +
Preference number: 5 (lower is better)
Translates to: FGLSFWRALKVSMSF*NRLQTEISFLRSSE
Trigger: CTCCGAAGATCGTAGAAAAGAAATCTCAGTCTGCAGCCTGTTTCAGAAACTCATAGATACTTTCAGGGCCCTCCAGAACGAAAGGCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp ATCCAGAGGGAACTGCTTGTAATACATCCACTCGCTGAACTCCATGATGTAGTCATTGGCGCCTTCACTTaGAAGTACATCTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: IQRELLVIHPLAELHDVVIGAFT*KYIWMQ
Trigger: CTGCATCCAGATGTACTTCAAAGTGAAGGCGCCAAT...GACTACATCATGGAGTTCAGCGAGTGGATGTATTACAAGCAGTTCCCTCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCGCTGTCAAGCAGAACTaGGTAGCATCCTCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLAVKQN*VASSFL
Trigger: AAGAAAGGAGGATGCTACCAAGTTCTGCTTGACAGC...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATTCAGGCTCTTTCATCTaGAGTGCCTGCTCTGCACAC +
Preference number: 5 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYSGSFI*SACSAH
Trigger: GTGTGCAGAGCAGGCACTCAAGATGAAAGAGCCTGA...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp GTGAAGTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCAAGATGGCCATAGTGGCCTaGTCTTCAGGACGATCAGGA +
Preference number: 5 (lower is better)
Translates to: VKFCPSLAFTMTICLKIKMAIVA*SSGRSG
Trigger: TCCTGATCGTCCTGAAGACAAGGCCACTATGGCCAT...CTTGATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAACTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CAA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTTTGTTCTCTGTCTTGTaGATGATGCTGATGATTCTC +
Preference number: 5 (lower is better)
Translates to: SGEESQRGRARDSGFTKTLFSVL*MMLMIL
Trigger: GAGAATCATCAGCATCATCAACAAGACAGAGAACAA...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCAAGTTCTGCCCAAGCTaGGCCTTCACAATGACCATA +
Preference number: 5 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLKFCPS*AFTMTI
Trigger: TATGGTCATTGTGAAGGCCAAGCTTGGGCAGAACTT...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATAGGAGGCCGTCTGATTaGAAGGCACTGTACTCTCTG +
Preference number: 5 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYRRPSD*KALYSL
Trigger: CAGAGAGTACAGTGCCTTCAAATCAGACGGCCTCCT...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTGCATCATCTCTGAGGTaGAACAGCTCTGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCASSLR*NSSVTV
Trigger: CACTGTCACAGAGCTGTTCAACCTCAGAGATGATGC...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATCAAGTGGCTTGCCAATaGCCAACAGGTTGTCCCACA +
Preference number: 5 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYQVACQ*PTGCPT
Trigger: TGTGGGACAACCTGTTGGCAATTGGCAAGCCACTTG...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CCA 90 bp CAGTATCTTCGGTTTCCATTTTCTTCAGGTATTGGAGGCAGTCACTaGCTATTGGCTCATTTTTCAAAGTCAGACACAGGCGGCCCAATT +
Preference number: 5 (lower is better)
Translates to: QYLRFPFSSGIGGSH*LLAHFSKSDTGGPI
Trigger: AATTGGGCCGCCTGTGTCTGACTTTGAAAAATGAGCCAATAGCCAGTGACTGCCTCCAATACCTGAAGAAAATGGAAACCGAAGATACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CCA 90 bp TTGTCAAGTCCAATAGGATCATCATCTGGCATTCTTGCAGATTCATaGCTACCAGTCTTTCTATTTCCAGGTGGGACAGGAAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LSSPIGSSSGILADS*LPVFLFPGGTGRSP
Trigger: TGGAGACCTTCCTGTCCCACCTGGAAATAGAAAGACTGGTAGCCATGAATCTGCAAGAATGCCAGATGATGATCCTATTGGACTTGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATTGGCGCCTTCACTTaGAAGTACATCTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCIGAFT*KYIWMQ
Trigger: CTGCATCCAGATGTACTTCAAAGTGAAGGCGCCAAT...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATCTCCTTTCTTCCGGCTaGCAGGTAACATTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYLLSSG*QVTFKQ
Trigger: CTGCTTGAATGTTACCTGCAAGCCGGAAGAAAGGAG...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp ATCCAGAGGGAACTGCTTGTAATACATCCACTCGCTGAACTCCATGATGTAGTCGGAGAGTATAATGGATaGCTGCTTGTCTTCCCTCAA +
Preference number: 5 (lower is better)
Translates to: IQRELLVIHPLAELHDVVGEYNG*LLVFPQ
Trigger: TTGAGGGAAGACAAGCAGCAATCCATTATACTCTCC...GACTACATCATGGAGTTCAGCGAGTGGATGTATTACAAGCAGTTCCCTCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCATTTTCCTCAGGATTaGCTCCAGGTTTTCCGGCAA +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCHFPQD*LQVFRQ
Trigger: TTGCCGGAAAACCTGGAGCAAATCCTGAGGAAAATG...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTTCCATTTCTAGCAGCTaGCCAGTATCTTCGGTTTCC +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCSISSS*PVSSVS
Trigger: GGAAACCGAAGATACTGGCAAGCTGCTAGAAATGGA...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTTTCCCAATGGAAACTTaGGACTCATTCTCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCFPMET*DSFSLS
Trigger: GGACAGCGAGAATGAGTCCAAAGTTTCCATTGGGAA...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp AGTGGGGAGGAGTCACAGAGAGGTAGAGCTAGGGATAGTGGCTTCACAAAGACTATCACAATTCTGTCTTaGTCATTCTCATATCCCAGA +
Preference number: 5 (lower is better)
Translates to: SGEESQRGRARDSGFTKTITILS*SFSYPR
Trigger: TCTGGGATATGAGAATGACAAAGACAGAATTGTGAT...AGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTCCTCCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATTCCACCTTCTGCCAGTaGTTCTCTGGTTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYSTFCQ*FSGFCS
Trigger: ACTGCAGAAACCAGAGAACAACTGGCAGAAGGTGGA...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CTAATGAGAATTAGCAAGAGCCTAGGTGCTATACCCAGCAACAGCTGTCTTCTCTCACTCTTGTCTTGCTaGAACACATGCAGCAGATCT +
Preference number: 5 (lower is better)
Translates to: LMRISKSLGAIPSNSCLLSLLSC*NTCSRS
Trigger: AGATCTGCTGCATGTGTTCAAGCAAGACAAGAGTGA...GAGAAGACAGCTGTTGCTGGGTATAGCACCTAGGCTCTTGCTAATTCTCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTTCTTCGTCAGTCAGGTaGCAGGCAAATTGGATTCGA +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCSSSVR*QANWIR
Trigger: TCGAATCCAATTTGCCTGCAACCTGACTGACGAAGA...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp AGCAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTCATCACCCACAGCTGTaGGCATCTGATTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: SNSCLLRIMYCGQDRYQAHHPQL*ASDFCF
Trigger: AAAGCAGAAATCAGATGCCAACAGCTGTGGGTGATG...AGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATGGGTCCACAACAAACTaGATGGTGTCTGAGTCGATC +
Preference number: 5 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYGSTTN*MVSESI
Trigger: GATCGACTCAGACACCATCAAGTTTGTTGTGGACCC...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTGGCAGTCACTGGCTATaGGCTCATTTTTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCGSHWL*AHFSKS
Trigger: TGACTTTGAAAAATGAGCCAATAGCCAGTGACTGCC...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTCATTTTCTTCAGGTATaGGAGGCAGTCACTGGCTAT +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCHFLQV*EAVTGY
Trigger: ATAGCCAGTGACTGCCTCCAATACCTGAAGAAAATG...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS-3UTR CAA 90 bp ATGGTGAAGTTCTGCCCAAGCTTGGCCTTCACAATGACCATATGTTTGAAAATCTTCCCAATGGAAACTTaGGACTCATTCTCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: MVKFCPSLAFTMTICLKIFPMET*DSFSLS
Trigger: GGACAGCGAGAATGAGTCCAAAGTTTCCATTGGGAA...GATTTTCAAACATATGGTCATTGTGAAGGCCAAGCTTGGGCAGAACTTCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS-3UTR CAA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATCATCATCTGGCATTCTaGCAGATTCATGGCTACCAG +
Preference number: 5 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYHHLAF*QIHGYQ
Trigger: CTGGTAGCCATGAATCTGCAAGAATGCCAGATGATG...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS-3UTR CAA 90 bp ACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTATGTTTTTCCAAGTGGCTaGCCAATTGCCAACAGGTTG +
Preference number: 5 (lower is better)
Translates to: TAVFSGLCIVDRTDIRLYVFPSG*PIANRL
Trigger: CAACCTGTTGGCAATTGGCAAGCCACTTGGAAAAAC...ATACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS GCA 90 bp TTAAAGCATCTAATTCACACTCCAGACCTTCCATTTCTAGCAGCTTaGCAGTATCTTCGGTTTCCATTTTCTTCAGGTATTGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: LKHLIHTPDLPFLAA*QYLRFPFSSGIGGS
Trigger: ACTGCCTCCAATACCTGAAGAAAATGGAAACCGAAGATACTGGCAAGCTGCTAGAAATGGAAGGTCTGGAGTGTGAATTAGATGCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS GCA 90 bp TTTCAAAGTCAGACACAGGCGGCCCAATTCAAAAAGCAAAAGGATTaGTTTCAGCGAATTGATGTGGTAAGTGATGGAGAGTATAATGGA +
Preference number: 5 (lower is better)
Translates to: FQSQTQAAQFKKQKD*FQRIDVVSDGEYNG
Trigger: TCCATTATACTCTCCATCACTTACCACATCAATTCGCTGAAAGCAATCCTTTTGCTTTTTGAATTGGGCCGCCTGTGTCTGACTTTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130453.8
CDS-3UTR CAA 90 bp GCTTGCAAATTCTTTTCTGGAATTAGTTTTACTCCTTCTGTCAAGGAAATCTGCCATAACGAACCATGGTaGAGAACATCTGCCGGTACT +
Preference number: 5 (lower is better)
Translates to: ACKFFSGISFTPSVKEICHNEPW*RTSAGT
Trigger: AGTACCGGCAGATGTTCTCAACCATGGTTCGTTATG...GCAGATTTCCTTGACAGAAGGAGTAAAACTAATTCCAGAAAAGAATTTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp CAACAGCTGTCTTCTCAGGATTATGTATTGTGGACAGGACAGATATCAGGCTGTTTCTTGTTCTCTGTCTaGTTGATGATGCTGATGATT +
Preference number: 5 (lower is better)
Translates to: QQLSSQDYVLWTGQISGCFLFSV*LMMLMI
Trigger: AATCATCAGCATCATCAACAAGACAGAGAACAAGAA...ACAGCCTGATATCTGTCCTGTCCACAATACATAATCCTGAGAAGACAGCTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 90 bp GACAGAAGCATTGAACACCAAGAAGTAATACCTCGGTTCTCCTTTTaGAAAGTTTATGGCCTTCATGTACTGTGTCACGCAATTTTCAAA +
Preference number: 5 (lower is better)
Translates to: DRSIEHQEVIPRFSF*KVYGLHVLCHAIFK
Trigger: TTTGAAAATTGCGTGACACAGTACATGAAGGCCATAAACTTTGCAAAAGGAGAACCGAGGTATTACTTCTTGGTGTTCAATGCTTCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS-3UTR CAA 90 bp GCTTGCAAATTCTTTTCTGGAATTAGTTTTACTCCTTCTGTCAAGGAAATCTGCCATTTTCTTCAGGTATaGGAGGCAGTCACTGGCTAT +
Preference number: 5 (lower is better)
Translates to: ACKFFSGISFTPSVKEICHFLQV*EAVTGY
Trigger: ATAGCCAGTGACTGCCTCCAATACCTGAAGAAAATG...GCAGATTTCCTTGACAGAAGGAGTAAAACTAATTCCAGAAAAGAATTTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS TCA 72 bp GAGTCGCTGGTGGAGCTGCAGCAGGGCCGCCAGCTGTaGGCTGCCCGTGTTTTTCGTGGCCGTGAGCAGGAC +
Preference number: 6 (lower is better)
Translates to: ESLVELQQGRQL*AARVFRGREQD
Trigger: GTCCTGCTCACGGCCACGAAAAACACGGGCAGCTCACAGCTGGCGGCCCTGCTGCAGCTCCACCAGCGACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp GTGGACTTGTACCAGAACTCCTCGGCCCCGCCCAGCTaGTGGGCCCTCTCAACCATGAGCATAGCCTGCGCA +
Preference number: 6 (lower is better)
Translates to: VDLYQNSSAPPS*WALSTMSIACA
Trigger: TGCGCAGGCTATGCTCATGGTTGAGAGGGCCCAGCAGCTGGGCGGGGCCGAGGAGTTCTGGTACAAGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp GACTTGTACCAGAACTCCTCGGCCCCGCCCAGCTGCTaGGCCCTCTCAACCATGAGCATAGCCTGCGCATGG +
Preference number: 6 (lower is better)
Translates to: DLYQNSSAPPSC*ALSTMSIACAW
Trigger: CCATGCGCAGGCTATGCTCATGGTTGAGAGGGCCCAGCAGCTGGGCGGGGCCGAGGAGTTCTGGTACAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp AGGCTGGTGGACATCTTGTCTTGCTGCCTGAGTCGCTaGTGGAGCTGCAGCAGGGCCGCCAGCTGTGAGCTG +
Preference number: 6 (lower is better)
Translates to: RLVDILSCCLSR*WSCSRAASCEL
Trigger: CAGCTCACAGCTGGCGGCCCTGCTGCAGCTCCACCAGCGACTCAGGCAGCAAGACAAGATGTCCACCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 90 bp AGCTTCTCGAAGGAGCCCTGCTCCATCTGCAGATCCAGGGCCTCCTaGCACACGAGCTGCAGCAGGTCCAGGCACGTTTCTGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: SFSKEPCSICRSRAS*HTSCSRSRHVSARL
Trigger: CAGCCTGGCAGAAACGTGCCTGGACCTGCTGCAGCTCGTGTGCAAGGAGGCCCTGGATCTGCAGATGGAGCAGGGCTCCTTCGAGAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp ACACTGGCAAACAGGCTGGTGGACATCTTGTCTTGCTaGCTGAGTCGCTGGTGGAGCTGCAGCAGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: TLANRLVDILSC*LSRWWSCSRAA
Trigger: GGCGGCCCTGCTGCAGCTCCACCAGCGACTCAGGCAGCAAGACAAGATGTCCACCAGCCTGTTTGCCAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp CTCTCGACCCCTACCAGACTCAGAAGGATGGCCGTCTaGATGGGCTTCACCAAGGACCGCTGTGATGCGCCC +
Preference number: 6 (lower is better)
Translates to: LSTPTRLRRMAV*MGFTKDRCDAP
Trigger: GGGCGCATCACAGCGGTCCTTGGTGAAGCCCATCCAGACGGCCATCCTTCTGAGTCTGGTAGGGGTCGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS GCA 72 bp GTCAGCGGCTTCCGGAGGTGGTGCCTCAGGTTGTGCTaGAGCAGGGGCAGGCAGATATTCCACTGTGCAGTA +
Preference number: 6 (lower is better)
Translates to: VSGFRRWCLRLC*SRGRQIFHCAV
Trigger: TACTGCACAGTGGAATATCTGCCTGCCCCTGCTGCAGCACAACCTGAGGCACCACCTCCGGAAGCCGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS GCA 72 bp CGGGATGCCGTGCGACAGACATCCCACACATCTTGCTaGCAGGCAACCTTGGCCAGCTCCGCCCAAATCACA +
Preference number: 6 (lower is better)
Translates to: RDAVRQTSHTSC*QATLASSAQIT
Trigger: TGTGATTTGGGCGGAGCTGGCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGTCTGTCGCACGGCATCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS CCA 72 bp CTTCGGAGGATAAGATGGCCTCAGCCAGAGTCAGGGTaGACTTGTACCAGAACTCCTCGGCCCCGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: LRRIRWPQPESG*TCTRTPRPRPA
Trigger: AGCTGGGCGGGGCCGAGGAGTTCTGGTACAAGTCCACCCTGACTCTGGCTGAGGCCATCTTATCCTCCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp CTCTCGACCCCTACCAGACTCAGAAGGATGGCCGTCTaGATGGGCTTCACCAAGGACCGCTGTGATGCGCTC +
Preference number: 6 (lower is better)
Translates to: LSTPTRLRRMAV*MGFTKDRCDAL
Trigger: GAGCGCATCACAGCGGTCCTTGGTGAAGCCCATCCAGACGGCCATCCTTCTGAGTCTGGTAGGGGTCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 72 bp TGGAGAGAGAAATCTCGTGACAGGGAGGTGACCTCGTaGAGCATGGAGAGCCCCTCCAGGGGCAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: WREKSRDREVTS*SMESPSRGSSR
Trigger: CCTGGAGCTGCCCCTGGAGGGGCTCTCCATGCTCAACGAGGTCACCTCCCTGTCACGAGATTTCTCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 90 bp CAGTTTCTGCTCTACACTGGCAAACAGGCTGGTGGACATCTTGTCTaGCTGCCTGAGTCGCTGGTGGAGCTGCAGCAGGGCCGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: QFLLYTGKQAGGHLV*LPESLVELQQGRQL
Trigger: CAGCTGGCGGCCCTGCTGCAGCTCCACCAGCGACTCAGGCAGCAAGACAAGATGTCCACCAGCCTGTTTGCCAGTGTAGAGCAGAAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS TCA 72 bp GCTGTGATGCGCCCTTCCCAATCCACAGGCTCCTGGTaGCGCGACAAGAACAGAAGGTACCTCTGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: AVMRPSQSTGSW*RDKNRRYLWPS
Trigger: AGAGGGCCAGAGGTACCTTCTGTTCTTGTCGCGTCACCAGGAGCCTGTGGATTGGGAAGGGCGCATCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS GCA 72 bp AATCGGGATGCCGTGCGACAGACATCCCACACATCTTaGTGCCAGGCAACCTTGGCCAGCTCCGCCCAAATC +
Preference number: 6 (lower is better)
Translates to: NRDAVRQTSHTS*CQATLASSAQI
Trigger: GATTTGGGCGGAGCTGGCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGTCTGTCGCACGGCATCCCGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 72 bp TCCTCCCAGCAGAAGGAAGGGTACACCGGATCTGTCTaGACGTACAGCAGATGGAGAGCCTTCCCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: SSQQKEGYTGSV*TYSRWRAFPAR
Trigger: CCTGGCTGGGAAGGCTCTCCATCTGCTGTACGTGCAGACAGATCCGGTGTACCCTTCCTTCTGCTGGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp TCTACACTGGCAAACAGGCTGGTGGACATCTTGTCTTaGTGCCTGAGTCGCTGGTGGAGCTGCAGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: STLANRLVDILS*CLSRWWSCSRA
Trigger: GGCCCTGCTGCAGCTCCACCAGCGACTCAGGCAGCAAGACAAGATGTCCACCAGCCTGTTTGCCAGTGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp CAGAGCAGGAGTAGGAGGCCCACTCTCCTATGCTGGTaGGGATCTCATCCGGTGGCTTGTTGGAAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: QSRSRRPTLLCW*GSHPVACWKLR
Trigger: CCTCAGCTTCCAACAAGCCACCGGATGAGATCCCCACCAGCATAGGAGAGTGGGCCTCCTACTCCTGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp TCTGAACAGATATCGCCTAGCTCCTGGAAAGCCCATTaGGCCTCAGACAGGAGCAGCCGGGCTGGTTGGTGC +
Preference number: 6 (lower is better)
Translates to: SEQISPSSWKAH*ASDRSSRAGWC
Trigger: GCACCAACCAGCCCGGCTGCTCCTGTCTGAGGCCCAATGGGCTTTCCAGGAGCTAGGCGATATCTGTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp GAAGGGTACACCGGATCTGTCTGCACGTACAGCAGATaGAGAGCCTTCCCAGCCAGGATCAGGAGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: EGYTGSVCTYSR*RAFPARIRSWA
Trigger: TGCCCAGCTCCTGATCCTGGCTGGGAAGGCTCTCCATCTGCTGTACGTGCAGACAGATCCGGTGTACCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp CGACAATGCTCTCGACCCCTACCAGACTCAGAAGGATaGCCGTCTGGATGGGCTTCACCAAGGACCGCTGTG +
Preference number: 6 (lower is better)
Translates to: RQCSRPLPDSEG*PSGWASPRTAV
Trigger: CACAGCGGTCCTTGGTGAAGCCCATCCAGACGGCCATCCTTCTGAGTCTGGTAGGGGTCGAGAGCATTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CAA 72 bp CTCCAGGATGCTGCTGAGACTCTGAGTGCACAGGGCTaGCTCCTTGACCCGTGTCTGCCTCTGGAACCACTG +
Preference number: 6 (lower is better)
Translates to: LQDAAETLSAQG*LLDPCLPLEPL
Trigger: CAGTGGTTCCAGAGGCAGACACGGGTCAAGGAGCAAGCCCTGTGCACTCAGAGTCTCAGCAGCATCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 90 bp CTCCATGTGCTCCAGGATGCTGCTGAGACTCTGAGTGCACAGGGCTaGCTCCTTGACCCGTGTCTGCCTCTGGAACCACTGGATACTCGT +
Preference number: 6 (lower is better)
Translates to: LHVLQDAAETLSAQG*LLDPCLPLEPLDTR
Trigger: ACGAGTATCCAGTGGTTCCAGAGGCAGACACGGGTCAAGGAGCAAGCCCTGTGCACTCAGAGTCTCAGCAGCATCCTGGAGCACATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 90 bp ATGGTGGCCCTCAGCATGTTGTCCTGCATCAGTGTGGGCCACTGGTaGTCGACAATGCTCTCGACCCCTACCAGACTCAGAAGGATGGCC +
Preference number: 6 (lower is better)
Translates to: MVALSMLSCISVGHW*STMLSTPTRLRRMA
Trigger: GGCCATCCTTCTGAGTCTGGTAGGGGTCGAGAGCATTGTCGACAACCAGTGGCCCACACTGATGCAGGACAACATGCTGAGGGCCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS GCA 72 bp GCGATCTTCCTCAGCAGGTCAGGGGGCATCTGCTTATaGATGGCCATGTCAGAGGGAGCCCAGTCACTCATG +
Preference number: 6 (lower is better)
Translates to: AIFLSRSGGICL*MAMSEGAQSLM
Trigger: CATGAGTGACTGGGCTCCCTCTGACATGGCCATGCATAAGCAGATGCCCCCTGACCTGCTGAGGAAGATCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 72 bp TGTCCTGCATCAGTGTGGGCCACTGGTTGTCGACAATaGTCTCGACCCCTACCAGACTCAGAAGGATGGCCG +
Preference number: 6 (lower is better)
Translates to: CPASVWATGCRQ*SRPLPDSEGWP
Trigger: CGGCCATCCTTCTGAGTCTGGTAGGGGTCGAGAGCATTGTCGACAACCAGTGGCCCACACTGATGCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CCA 72 bp GGCAGGCAGATATTCCACTGTGCAGTACACAGCACGTaGATGGTCGTGGGGTTACCCAGACGAATGGCTCGC +
Preference number: 6 (lower is better)
Translates to: GRQIFHCAVHST*MVVGLPRRMAR
Trigger: GCGAGCCATTCGTCTGGGTAACCCCACGACCATCCACGTGCTGTGTACTGCACAGTGGAATATCTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CCA 72 bp TCTTCCTCAGCAGGTCAGGGGGCATCTGCTTATGCATaGCCATGTCAGAGGGAGCCCAGTCACTCATGGAGC +
Preference number: 6 (lower is better)
Translates to: SSSAGQGASAYA*PCQREPSHSWS
Trigger: GCTCCATGAGTGACTGGGCTCCCTCTGACATGGCCATGCATAAGCAGATGCCCCCTGACCTGCTGAGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS CCA 72 bp CTTCAGAGCAGGAGTAGGAGGCCCACTCTCCTATGCTaGTGGGGATCTCATCCGGTGGCTTGTTGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LQSRSRRPTLLC*WGSHPVACWKL
Trigger: CAGCTTCCAACAAGCCACCGGATGAGATCCCCACCAGCATAGGAGAGTGGGCCTCCTACTCCTGCTCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp GCCCTCAGCATGTTGTCCTGCATCAGTGTGGGCCACTaGTTGTCGACAATGCTCTCGACCCCTACCAGACTC +
Preference number: 6 (lower is better)
Translates to: ALSMLSCISVGH*LSTMLSTPTRL
Trigger: GAGTCTGGTAGGGGTCGAGAGCATTGTCGACAACCAGTGGCCCACACTGATGCAGGACAACATGCTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CCA 72 bp GGATGGTGGCCCTCAGCATGTTGTCCTGCATCAGTGTaGGCCACTGGTTGTCGACAATGCTCTCGACCCCTA +
Preference number: 6 (lower is better)
Translates to: GWWPSACCPASV*ATGCRQCSRPL
Trigger: TAGGGGTCGAGAGCATTGTCGACAACCAGTGGCCCACACTGATGCAGGACAACATGCTGAGGGCCACCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CCA 72 bp GCTTGCCAATTGCCAACAGGTTGTCCCACAGGATGGTaGCCCTCAGCATGTTGTCCTGCATCAGTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: ACQLPTGCPTGW*PSACCPASVWA
Trigger: GGCCCACACTGATGCAGGACAACATGCTGAGGGCCACCATCCTGTGGGACAACCTGTTGGCAATTGGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CAA 72 bp CCTTCAGCCTTTCGGCTTTGCTCCTTGGGGGCTTCCTaGAAGACTGCCGAGGAGGAGGTCTCTACACTCCTG +
Preference number: 6 (lower is better)
Translates to: PSAFRLCSLGAS*KTAEEEVSTLL
Trigger: CAGGAGTGTAGAGACCTCCTCCTCGGCAGTCTTCAAGGAAGCCCCCAAGGAGCAAAGCCGAAAGGCTGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 90 bp GAGGAGGCAAAATCGGGATGCCGTGCGACAGACATCCCACACATCTaGCTGCCAGGCAACCTTGGCCAGCTCCGCCCAAATCACAATTCT +
Preference number: 6 (lower is better)
Translates to: EEAKSGCRATDIPHI*LPGNLGQLRPNHNS
Trigger: AGAATTGTGATTTGGGCGGAGCTGGCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGTCTGTCGCACGGCATCCCGATTTTGCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS CAA 90 bp CCAATTGCCAACAGGTTGTCCCACAGGATGGTGGCCCTCAGCATGTaGTCCTGCATCAGTGTGGGCCACTGGTTGTCGACAATGCTCTCG +
Preference number: 6 (lower is better)
Translates to: PIANRLSHRMVALSM*SCISVGHWLSTMLS
Trigger: CGAGAGCATTGTCGACAACCAGTGGCCCACACTGATGCAGGACAACATGCTGAGGGCCACCATCCTGTGGGACAACCTGTTGGCAATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS TCA 72 bp AGCTGGGCCCTGCACAGGTGCGCTCGGCCCAAAAACTaGGTGATTGGCGCCTTCACTTTGAAGTACATCTGG +
Preference number: 6 (lower is better)
Translates to: SWALHRCARPKN*VIGAFTLKYIW
Trigger: CCAGATGTACTTCAAAGTGAAGGCGCCAATCACTCAGTTTTTGGGCCGAGCGCACCTGTGCAGGGCCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS TCA 72 bp GAGACGGTTCCACAGCATCTGGAGAGAGAAATCTCGTaGCAGGGAGGTGACCTCGTTGAGCATGGAGAGCCC +
Preference number: 6 (lower is better)
Translates to: ETVPQHLEREIS*QGGDLVEHGEP
Trigger: GGGCTCTCCATGCTCAACGAGGTCACCTCCCTGTCACGAGATTTCTCTCTCCAGATGCTGTGGAACCGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS TCA 72 bp TGCCCCGGGCCTCCTCGTAAGGGTCCACAACAAACTTaGTGGTGTCTGAGTCGATCAGGTTGCATTCCGGTG +
Preference number: 6 (lower is better)
Translates to: CPGPPRKGPQQT*WCLSRSGCIPV
Trigger: CACCGGAATGCAACCTGATCGACTCAGACACCATCAAGTTTGTTGTGGACCCTTACGAGGAGGCCCGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp ATACCTAGGCTGTCCAGTCGCATGGCCTTCTGCATATaGTCAATGGCAGGCTCCACCCGGTCATCATCCTGC +
Preference number: 6 (lower is better)
Translates to: IPRLSSRMAFCI*SMAGSTRSSSC
Trigger: GCAGGATGATGACCGGGTGGAGCCTGCCATTGAGCATATGCAGAAGGCCATGCGACTGGACAGCCTAGGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS GCA 72 bp ACCTTTGCGATCTTCCTCAGCAGGTCAGGGGGCATCTaGTTATGCATGGCCATGTCAGAGGGAGCCCAGTCA +
Preference number: 6 (lower is better)
Translates to: TFAIFLSRSGGI*LCMAMSEGAQS
Trigger: TGACTGGGCTCCCTCTGACATGGCCATGCATAAGCAGATGCCCCCTGACCTGCTGAGGAAGATCGCAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 72 bp GTGGACAGTGGCCTCAGCGCTGATGAACAACACCTTTaGGATCTTCCTCAGCAGGTCAGGGGGCATCTGCTT +
Preference number: 6 (lower is better)
Translates to: VDSGLSADEQHL*DLPQQVRGHLL
Trigger: AAGCAGATGCCCCCTGACCTGCTGAGGAAGATCGCAAAGGTGTTGTTCATCAGCGCTGAGGCCACTGTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000155075.8
CDS GCA 72 bp GATCTTCAGAGCAGGAGTAGGAGGCCCACTCTCCTATaGTGGTGGGGATCTCATCCGGTGGCTTGTTGGAAG +
Preference number: 6 (lower is better)
Translates to: DLQSRSRRPTLL*WWGSHPVACWK
Trigger: CTTCCAACAAGCCACCGGATGAGATCCCCACCAGCATAGGAGAGTGGGCCTCCTACTCCTGCTCTGAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp CCCAGCTGCTGGGCCCTCTCAACCATGAGCATAGCCTaGGCATGGTTCTTTTCCTTGTTGGCCAACTCTGCT +
Preference number: 6 (lower is better)
Translates to: PSCWALSTMSIA*AWFFSLLANSA
Trigger: AGCAGAGTTGGCCAACAAGGAAAAGAACCATGCGCAGGCTATGCTCATGGTTGAGAGGGCCCAGCAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp TTGTCCCACAGGATGGTGGCCCTCAGCATGTTGTCCTaGATCAGTGTGGGCCACTGGTTGTCGACAATGCTC +
Preference number: 6 (lower is better)
Translates to: LSHRMVALSMLS*ISVGHWLSTML
Trigger: GAGCATTGTCGACAACCAGTGGCCCACACTGATGCAGGACAACATGCTGAGGGCCACCATCCTGTGGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CCA 72 bp GAAACTTTGGACTCATTCTCGCTGTCCAGCACAATCTaGAAGGTGTCGGGGGCAAGAGCCAGGCCTGCGTTC +
Preference number: 6 (lower is better)
Translates to: ETLDSFSLSSTI*KVSGARARPAF
Trigger: GAACGCAGGCCTGGCTCTTGCCCCCGACACCTTCCAGATTGTGCTGGACAGCGAGAATGAGTCCAAAGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS CCA 72 bp GTGCACAGGGCTTGCTCCTTGACCCGTGTCTGCCTCTaGAACCACTGGATACTCGTCAACAGGTCAGAGATG +
Preference number: 6 (lower is better)
Translates to: VHRACSLTRVCL*NHWILVNRSEM
Trigger: CATCTCTGACCTGTTGACGAGTATCCAGTGGTTCCAGAGGCAGACACGGGTCAAGGAGCAAGCCCTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp GTGGCTTGCCAATTGCCAACAGGTTGTCCCACAGGATaGTGGCCCTCAGCATGTTGTCCTGCATCAGTGTGG +
Preference number: 6 (lower is better)
Translates to: VACQLPTGCPTG*WPSACCPASVW
Trigger: CCACACTGATGCAGGACAACATGCTGAGGGCCACCATCCTGTGGGACAACCTGTTGGCAATTGGCAAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CAA 72 bp TTCTGCTCTACACTGGCAAACAGGCTGGTGGACATCTaGTCTTGCTGCCTGAGTCGCTGGTGGAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: FCSTLANRLVDI*SCCLSRWWSCS
Trigger: GCTGCAGCTCCACCAGCGACTCAGGCAGCAAGACAAGATGTCCACCAGCCTGTTTGCCAGTGTAGAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 72 bp TCCAGTAGCTGTTCCCAGTCAGCCTGGCTTGGAAAGTaGTGGTTTCCCAGGTGCCCCATCCAACGTCCGGTA +
Preference number: 6 (lower is better)
Translates to: SSSCSQSAWLGK*WFPRCPIQRPV
Trigger: TACCGGACGTTGGATGGGGCACCTGGGAAACCACAACTTTCCAAGCCAGGCTGACTGGGAACAGCTACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CAA 72 bp AACAGGTTGTCCCACAGGATGGTGGCCCTCAGCATGTaGTCCTGCATCAGTGTGGGCCACTGGTTGTCGACA +
Preference number: 6 (lower is better)
Translates to: NRLSHRMVALSM*SCISVGHWLST
Trigger: TGTCGACAACCAGTGGCCCACACTGATGCAGGACAACATGCTGAGGGCCACCATCCTGTGGGACAACCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CAA 90 bp TTCTTCAGACCTTCAGCCTTTCGGCTTTGCTCCTTGGGGGCTTCCTaGAAGACTGCCGAGGAGGAGGTCTCTACACTCCTGTCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: FFRPSAFRLCSLGAS*KTAEEEVSTLLSSV
Trigger: CACAGAGGACAGGAGTGTAGAGACCTCCTCCTCGGCAGTCTTCAAGGAAGCCCCCAAGGAGCAAAGCCGAAAGGCTGAAGGTCTGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS TCA 72 bp GTGACGCGACAAGAACAGAAGGTACCTCTGGCCCTCTaGGCTTTCTATCGTCCGCTTCTGGCTGTGAGAGGA +
Preference number: 6 (lower is better)
Translates to: VTRQEQKVPLAL*AFYRPLLAVRG
Trigger: TCCTCTCACAGCCAGAAGCGGACGATAGAAAGCTCAGAGGGCCAGAGGTACCTTCTGTTCTTGTCGCGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196540.5
CDS GCA 72 bp AGGCTCTGCCATGCCCTGAAAGAGGAGGCCAGTTTCTaGTCTACACTGGCAAACAGGCTGGTGGACATCTTG +
Preference number: 6 (lower is better)
Translates to: RLCHALKEEASF*STLANRLVDIL
Trigger: CAAGATGTCCACCAGCCTGTTTGCCAGTGTAGAGCAGAAACTGGCCTCCTCTTTCAGGGCATGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp CAGTCAGCCTGGCTTGGAAAGTTGTGGTTTCCCAGGTaGCCCATCCAACGTCCGGTAAAAGTGTCTCGGTAC +
Preference number: 6 (lower is better)
Translates to: QSAWLGKLWFPR*PIQRPVKVSRY
Trigger: GTACCGAGACACTTTTACCGGACGTTGGATGGGGCACCTGGGAAACCACAACTTTCCAAGCCAGGCTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CCA 72 bp ATGGTTGAGAACATCTGCCGGTACTTGTGGGGCACCTaGGTTCTGACGAATGGCGCTGCTGTCAAGCAGAAC +
Preference number: 6 (lower is better)
Translates to: MVENICRYLWGT*VLTNGAAVKQN
Trigger: GTTCTGCTTGACAGCAGCGCCATTCGTCAGAACCCAGGTGCCCCACAAGTACCGGCAGATGTTCTCAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS CCA 72 bp TCTTGTCCCTGTAGATACCTAGGCTGTCCAGTCGCATaGCCTTCTGCATATGCTCAATGGCAGGCTCCACCC +
Preference number: 6 (lower is better)
Translates to: SCPCRYLGCPVA*PSAYAQWQAPP
Trigger: GGGTGGAGCCTGCCATTGAGCATATGCAGAAGGCCATGCGACTGGACAGCCTAGGTATCTACAGGGACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CCA 72 bp TCTCGCTCCTCCTTATGGAGACGGTTCCACAGCATCTaGAGAGAGAAATCTCGTGACAGGGAGGTGACCTCG +
Preference number: 6 (lower is better)
Translates to: SRSSLWRRFHSI*REKSRDREVTS
Trigger: CGAGGTCACCTCCCTGTCACGAGATTTCTCTCTCCAGATGCTGTGGAACCGTCTCCATAAGGAGGAGCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 72 bp CACTCTCCTATGCTGGTGGGGATCTCATCCGGTGGCTaGTTGGAAGCTGAGGTTGAGATCTGCTTCGTGTCC +
Preference number: 6 (lower is better)
Translates to: HSPMLVGISSGG*LEAEVEICFVS
Trigger: GGACACGAAGCAGATCTCAACCTCAGCTTCCAACAAGCCACCGGATGAGATCCCCACCAGCATAGGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 72 bp CTCAGCATGTTGTCCTGCATCAGTGTGGGCCACTGGTaGTCGACAATGCTCTCGACCCCTACCAGACTCAGA +
Preference number: 6 (lower is better)
Translates to: LSMLSCISVGHW*STMLSTPTRLR
Trigger: TCTGAGTCTGGTAGGGGTCGAGAGCATTGTCGACAACCAGTGGCCCACACTGATGCAGGACAACATGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS TCA 72 bp GCATGGTACCCAACTGCAGCCGGCGGTAGGTTATCTTaGTCTTGTCCCTGTAGATACCTAGGCTGTCCAGTC +
Preference number: 6 (lower is better)
Translates to: AWYPTAAGGRLS*SCPCRYLGCPV
Trigger: GACTGGACAGCCTAGGTATCTACAGGGACAAGATCAAGATAACCTACCGCCGGCTGCAGTTGGGTACCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS TCA 72 bp AGCACACCCAGCTGCAGGATTGGGATGCTGAGCTCATaGAGGAACATCTTCTGCAGGGCTTTGGCCAAATGG +
Preference number: 6 (lower is better)
Translates to: STPSCRIGMLSS*RNIFCRALAKW
Trigger: CCATTTGGCCAAAGCCCTGCAGAAGATGTTCCTTCATGAGCTCAGCATCCCAATCCTGCAGCTGGGTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS TCA 72 bp AGTGGCTGCAGACTCTCCAGCTGTGTTAGCACCAAGTaGGGCAGGGTCCTCTTCAGGAAGAACCATTGCAAG +
Preference number: 6 (lower is better)
Translates to: SGCRLSSCVSTK*GRVLFRKNHCK
Trigger: CTTGCAATGGTTCTTCCTGAAGAGGACCCTGCCTCACTTGGTGCTAACACAGCTGGAGAGTCTGCAGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS TCA 72 bp CTCAAAGGCAGCACCATACAGACAAGACCTGTCCTGTaGATGCTGCAGAAAGAGGATCCGGAACACGGGTGG +
Preference number: 6 (lower is better)
Translates to: LKGSTIQTRPVL*MLQKEDPEHGW
Trigger: CCACCCGTGTTCCGGATCCTCTTTCTGCAGCATTCACAGGACAGGTCTTGTCTGTATGGTGCTGCCTTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp GTACTTGTGGGGCACCTGGGTTCTGACGAATGGCGCTaGTGTCAAGCAGAACTTGGTAGCATCCTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: VLVGHLGSDEWR*CQAELGSILLS
Trigger: AGAAAGGAGGATGCTACCAAGTTCTGCTTGACAGCAGCGCCATTCGTCAGAACCCAGGTGCCCCACAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS GCA 72 bp ACCATCCTTTTCTTCAGACCTTCAGCCTTTCGGCTTTaGTCCTTGGGGGCTTCCTTGAAGACTGCCGAGGAG +
Preference number: 6 (lower is better)
Translates to: TILFFRPSAFRL*SLGASLKTAEE
Trigger: CTCCTCGGCAGTCTTCAAGGAAGCCCCCAAGGAGCAAAGCCGAAAGGCTGAAGGTCTGAAGAAAAGGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp AGGATGCTGAAATGCTGCTCTGTGACACAGAGGCTCTaGCATGCCCTGAAAGAGGAGGCCAGTTTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: RMLKCCSVTQRL*HALKEEASFCS
Trigger: AGAGCAGAAACTGGCCTCCTCTTTCAGGGCATGGCAGAGCCTCTGTGTCACAGAGCAGCATTTCAGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp ACAGGAAGGTCTCCATTCCATAGAAGAAGAAGCCTCTaGAGCTGTCCAGTAGCTGTTCCCAGTCAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: TGRSPFHRRRSL*SCPVAVPSQPG
Trigger: GCCAGGCTGACTGGGAACAGCTACTGGACAGCTGCAGAGGCTTCTTCTTCTATGGAATGGAGACCTTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CCA 72 bp CCTGCACAGGTGCGCTCGGCCCAAAAACTGAGTGATTaGCGCCTTCACTTTGAAGTACATCTGGATGCAGTC +
Preference number: 6 (lower is better)
Translates to: PAQVRSAQKLSD*RLHFEVHLDAV
Trigger: GACTGCATCCAGATGTACTTCAAAGTGAAGGCGCCAATCACTCAGTTTTTGGGCCGAGCGCACCTGTGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS CCA 72 bp TGCTGGGCCCTCTCAACCATGAGCATAGCCTGCGCATaGTTCTTTTCCTTGTTGGCCAACTCTGCTAGAAGC +
Preference number: 6 (lower is better)
Translates to: CWALSTMSIACA*FFSLLANSARS
Trigger: GCTTCTAGCAGAGTTGGCCAACAAGGAAAAGAACCATGCGCAGGCTATGCTCATGGTTGAGAGGGCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp AGTAGCTGTTCCCAGTCAGCCTGGCTTGGAAAGTTGTaGTTTCCCAGGTGCCCCATCCAACGTCCGGTAAAA +
Preference number: 6 (lower is better)
Translates to: SSCSQSAWLGKL*FPRCPIQRPVK
Trigger: TTTTACCGGACGTTGGATGGGGCACCTGGGAAACCACAACTTTCCAAGCCAGGCTGACTGGGAACAGCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CAA 72 bp CGACAGACATCCCACACATCTTGCTGCCAGGCAACCTaGGCCAGCTCCGCCCAAATCACAATTCTGTCTTTG +
Preference number: 6 (lower is better)
Translates to: RQTSHTSCCQAT*ASSAQITILSL
Trigger: CAAAGACAGAATTGTGATTTGGGCGGAGCTGGCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGTCTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS CAA 72 bp TCTCCTATGCTGGTGGGGATCTCATCCGGTGGCTTGTaGGAAGCTGAGGTTGAGATCTGCTTCGTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: SPMLVGISSGGL*EAEVEICFVSL
Trigger: CAAGGACACGAAGCAGATCTCAACCTCAGCTTCCAACAAGCCACCGGATGAGATCCCCACCAGCATAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 72 bp CACCATCCTTTTCTTCAGACCTTCAGCCTTTCGGCTTaGCTCCTTGGGGGCTTCCTTGAAGACTGCCGAGGA +
Preference number: 6 (lower is better)
Translates to: HHPFLQTFSLSA*LLGGFLEDCRG
Trigger: TCCTCGGCAGTCTTCAAGGAAGCCCCCAAGGAGCAAAGCCGAAAGGCTGAAGGTCTGAAGAAAAGGATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 90 bp AACAGGATCATGAGACTATCAACCTTTTCCAGAATCTCAGCGATGTaGGTCAGCGGCTTCCGGAGGTGGTGCCTCAGGTTGTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: NRIMRLSTFSRISAM*VSGFRRWCLRLCCS
Trigger: GCTGCAGCACAACCTGAGGCACCACCTCCGGAAGCCGCTGACCAACATCGCTGAGATTCTGGAAAAGGTTGATAGTCTCATGATCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CAA 90 bp TGGGCCCTCTCAACCATGAGCATAGCCTGCGCATGGTTCTTTTCCTaGTTGGCCAACTCTGCTAGAAGCAACAGGGACTGGGCTTCTGAA +
Preference number: 6 (lower is better)
Translates to: WALSTMSIACAWFFS*LANSARSNRDWASE
Trigger: TTCAGAAGCCCAGTCCCTGTTGCTTCTAGCAGAGTTGGCCAACAAGGAAAAGAACCATGCGCAGGCTATGCTCATGGTTGAGAGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp CTTCTTCCGGGCACTGTCTTTTGGGGTGGCTTTCTTTaGCTGTTCAATGGCCATAGTGGCCTTGTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: LLPGTVFWGGFL*LFNGHSGLVFR
Trigger: CCTGAAGACAAGGCCACTATGGCCATTGAACAGGCAAAGAAAGCCACCCCAAAAGACAGTGCCCGGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 72 bp AGCTTTGTCCACAGAGAGGATGTGATGTCGAGCTTTTaGACAGAGGTAGGTGAAGCGGCCCTTGATCTTCCC +
Preference number: 6 (lower is better)
Translates to: SFVHREDVMSSF*TEVGEAALDLP
Trigger: GGGAAGATCAAGGGCCGCTTCACCTACCTCTGTGCAAAAGCTCGACATCACATCCTCTCTGTGGACAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 72 bp TGCTTTGACGTTGTCATAGAGGAGGCAAAATCGGGATaGCGTGCGACAGACATCCCACACATCTTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: CFDVVIEEAKSG*RATDIPHILLP
Trigger: TGGCAGCAAGATGTGTGGGATGTCTGTCGCACGGCATCCCGATTTTGCCTCCTCTATGACAACGTCAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS GCA 72 bp TCATCCGGTGGCTTGTTGGAAGCTGAGGTTGAGATCTaGTTCGTGTCCTTGACCTTTTCCTTCTCCCTCTCC +
Preference number: 6 (lower is better)
Translates to: SSGGLLEAEVEI*FVSLTFSFSLS
Trigger: GGAGAGGGAGAAGGAAAAGGTCAAGGACACGAAGCAGATCTCAACCTCAGCTTCCAACAAGCCACCGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp TTTTCTGCAGCTGGCCTGCTCCATGTCCCCGAAGTATaGCTGTCCAATCACCTCTTCATGATGAGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: FSAAGLLHVPEV*LSNHLFMMSCC
Trigger: GCAGCAACTCATCATGAAGAGGTGATTGGACAGGCATACTTCGGGGACATGGAGCAGGCCAGCTGCAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp AACACGGGTGGGATCTCATTCAGGATGCTGAAATGCTaGTCTGTGACACAGAGGCTCTGCCATGCCCTGAAA +
Preference number: 6 (lower is better)
Translates to: NTGGISFRMLKC*SVTQRLCHALK
Trigger: TTTCAGGGCATGGCAGAGCCTCTGTGTCACAGAGCAGCATTTCAGCATCCTGAATGAGATCCCACCCGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp TACAAAGCCTACCTCAGCGCTGATGAACAACACCTTTaGGATCTTCCTCAGCAGGTCAGGGGGCATCTGCTT +
Preference number: 6 (lower is better)
Translates to: YKAYLSADEQHL*DLPQQVRGHLL
Trigger: AAGCAGATGCCCCCTGACCTGCTGAGGAAGATCGCAAAGGTGTTGTTCATCAGCGCTGAGGTAGGCTTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140820.8
CDS CCA 72 bp GACAGACATCCCACACATCTTGCTGCCAGGCAACCTTaGCCAGCTCCGCCCAAATCACAATTCTGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: DRHPTHLAARQP*PAPPKSQFCLC
Trigger: ACAAAGACAGAATTGTGATTTGGGCGGAGCTGGCCAAGGTTGCCTGGCAGCAAGATGTGTGGGATGTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS CCA 72 bp TGGTTGTTCAGCTGTACACCTTCTGAGCGCAGAAGGTaGACAGTGGCCTCAGCGCTGATGAACAACACCTTT +
Preference number: 6 (lower is better)
Translates to: WLFSCTPSERRR*TVASALMNNTF
Trigger: AAAGGTGTTGTTCATCAGCGCTGAGGCCACTGTCCACCTTCTGCGCTCAGAAGGTGTACAGCTGAACAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000155075.8
CDS CCA 72 bp GATCCAGGATGCCAATGCATTCCACCATCTCTATGCTaGCAGAGGCCACGATGTCCAGAAGGTTGTTGCTCA +
Preference number: 6 (lower is better)
Translates to: DPGCQCIPPSLC*QRPRCPEGCCS
Trigger: TGAGCAACAACCTTCTGGACATCGTGGCCTCTGCCAGCATAGAGATGGTGGAATGCATTGGCATCCTGGATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp CCTTGCAATAACCGCCCACGGTTATCAGTTTCCCCTTaGGTGAAGGCATGGTCTTTGGTCTCTCAAAGGCAG +
Preference number: 6 (lower is better)
Translates to: PCNNRPRLSVSP*VKAWSLVSQRQ
Trigger: CTGCCTTTGAGAGACCAAAGACCATGCCTTCACCCAAGGGGAAACTGATAACCGTGGGCGGTTATTGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 72 bp ATGAGACTATCAACCTTTTCCAGAATCTCAGCGATGTaGGTCAGCGGCTTCCGGAGGTGGTGCCTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: MRLSTFSRISAM*VSGFRRWCLRL
Trigger: CAACCTGAGGCACCACCTCCGGAAGCCGCTGACCAACATCGCTGAGATTCTGGAAAAGGTTGATAGTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CAA 72 bp GTGGGTGTCCACACCCACTCTGTGTATCCAACGATCTaGATGATGCTCAGGAAGTGGAATAGGGACTCCACC +
Preference number: 6 (lower is better)
Translates to: VGVHTHSVYPTI*MMLRKWNRDST
Trigger: GGTGGAGTCCCTATTCCACTTCCTGAGCATCATCAAGATCGTTGGATACACAGAGTGGGTGTGGACACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155075.8
CDS CAA 90 bp TCCACCATCTCTATGCTGGCAGAGGCCACGATGTCCAGAAGGTTGTaGCTCAGGGAAGTCTGTATACACTGCAGCAATACCTCCGATGTC +
Preference number: 6 (lower is better)
Translates to: STISMLAEATMSRRL*LREVCIHCSNTSDV
Trigger: GACATCGGAGGTATTGCTGCAGTGTATACAGACTTCCCTGAGCAACAACCTTCTGGACATCGTGGCCTCTGCCAGCATAGAGATGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 90 bp CCTTCACCTCTACAGAGTCGGAGAGAGTCAGCTGCTCATGCAGGGTaGGCAGGTAATCTTCCATCTCCGGTTCCTTGTTCTTCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: PSPLQSRRESAAHAG*AGNLPSPVPCSSLS
Trigger: AGAAAGAGAAGAACAAGGAACCGGAGATGGAAGATTACCTGCCAACCCTGCATGAGCAGCTGACTCTCTCCGACTCTGTAGAGGTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 90 bp CATTCCACCATCTCTATGCTGGCAGAGGCCACGATGTCCAGAAGGTaGTTGCTCAGGGAAGTCTGTATACACTGCAGCAATACCTCCGAT +
Preference number: 6 (lower is better)
Translates to: HSTISMLAEATMSRR*LLREVCIHCSNTSD
Trigger: ATCGGAGGTATTGCTGCAGTGTATACAGACTTCCCTGAGCAACAACCTTCTGGACATCGTGGCCTCTGCCAGCATAGAGATGGTGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 90 bp ATGAGACGAACTGTTTTTCCAAGTGGCTTGCCAATTGCCAACAGGTaGTCCCACAGGATGGTGGCCCTCAGCATGTTGTCCTGCATCAGT +
Preference number: 6 (lower is better)
Translates to: MRRTVFPSGLPIANR*SHRMVALSMLSCIS
Trigger: ACTGATGCAGGACAACATGCTGAGGGCCACCATCCTGTGGGACAACCTGTTGGCAATTGGCAAGCCACTTGGAAAAACAGTTCGTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS TCA 72 bp TGGGGTCAAGCTCCGACTTTCCCAGGTTTGCAGACTTaGTCAGTTCATAAGCTCTTCGCAGGGCAGTTGCAT +
Preference number: 6 (lower is better)
Translates to: WGQAPTFPGLQT*SVHKLFAGQLH
Trigger: ATGCAACTGCCCTGCGAAGAGCTTATGAACTGATCAAGTCTGCAAACCTGGGAAAGTCGGAGCTTGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS TCA 72 bp TGTCAGAGGGAGCCCAGTCACTCATGGAGCCCTCAATaGCTTTCTTCTTCCTCCCTCGTTTTAGCTTTGTGG +
Preference number: 6 (lower is better)
Translates to: CQREPSHSWSPQ*LSSSSLVLALW
Trigger: CCACAAAGCTAAAACGAGGGAGGAAGAAGAAAGTCATTGAGGGCTCCATGAGTGACTGGGCTCCCTCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS TCA 72 bp TGGCCCTCTGAGCTTTCTATCGTCCGCTTCTGGCTGTaGGAGGACCTTGTCAAGTCCAATAGGATCATCATC +
Preference number: 6 (lower is better)
Translates to: WPSELSIVRFWL*EDLVKSNRIII
Trigger: GATGATGATCCTATTGGACTTGACAAGGTCCTCTCACAGCCAGAAGCGGACGATAGAAAGCTCAGAGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS GCA 72 bp TGGATGGTCGTGGGGTTACCCAGACGAATGGCTCGCTaGAGGATGTTGTCCATTCTCTTTATGATGAGTAGC +
Preference number: 6 (lower is better)
Translates to: WMVVGLPRRMAR*RMLSILFMMSS
Trigger: GCTACTCATCATAAAGAGAATGGACAACATCCTGCAGCGAGCCATTCGTCTGGGTAACCCCACGACCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS GCA 72 bp AATGAGACGAACTGTTTTTCCAAGTGGCTTGCCAATTaGCAACAGGTTGTCCCACAGGATGGTGGCCCTCAG +
Preference number: 6 (lower is better)
Translates to: NETNCFSKWLAN*QQVVPQDGGPQ
Trigger: CTGAGGGCCACCATCCTGTGGGACAACCTGTTGGCAATTGGCAAGCCACTTGGAAAAACAGTTCGTCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CAA 72 bp GTGGCTTTCTTTGCCTGTTCAATGGCCATAGTGGCCTaGTCTTCAGGACGATCAGGAGACTGGTACAGCATG +
Preference number: 6 (lower is better)
Translates to: VAFFACSMAIVA*SSGRSGDWYSM
Trigger: CATGCTGTACCAGTCTCCTGATCGTCCTGAAGACAAGGCCACTATGGCCATTGAACAGGCAAAGAAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
ENSMUST00000155075.8
CDS CAA 72 bp TCAACCATGAGCATAGCCTGCGCATGGTTCTTTTCCTaGTTGGCCAACTCTGCTAGAAGCAACAGGGACTGG +
Preference number: 6 (lower is better)
Translates to: STMSIACAWFFS*LANSARSNRDW
Trigger: CCAGTCCCTGTTGCTTCTAGCAGAGTTGGCCAACAAGGAAAAGAACCATGCGCAGGCTATGCTCATGGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 72 bp CGGTTATCAGTTTCCCCTTGGGTGAAGGCATGGTCTTaGGTCTCTCAAAGGCAGCACCATACAGACAAGACC +
Preference number: 6 (lower is better)
Translates to: RLSVSPWVKAWS*VSQRQHHTDKT
Trigger: GGTCTTGTCTGTATGGTGCTGCCTTTGAGAGACCAAAGACCATGCCTTCACCCAAGGGGAAACTGATAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp TTGTCCACAATCAGGATCAGGTACTCAGGGTCAGGCTaGCCTGAAGGGAGAGAGATTTTCCTTTCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: LSTIRIRYSGSG*PEGREIFLSFS
Trigger: AGAGAAGGAAAGGAAAATCTCTCTCCCTTCAGGGCAGCCTGACCCTGAGTACCTGATCCTGATTGTGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp GGAAGAACCATTGCAAGCCGATGGATGTGTAGTCAGTaGTGTTCTGAAGGAAGTCTGCAAGCAGCTTCTCGA +
Preference number: 6 (lower is better)
Translates to: GRTIASRWMCSQ*CSEGSLQAASR
Trigger: TCGAGAAGCTGCTTGCAGACTTCCTTCAGAACACCACTGACTACACATCCATCGGCTTGCAATGGTTCTTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 72 bp TGCTCCTCGACGGCTCCTCGAAGGTACATTTTGAGCTaGCTTCCCAGCCTTAAAGCATCTAATTCACACTCC +
Preference number: 6 (lower is better)
Translates to: CSSTAPRRYILS*LPSLKASNSHS
Trigger: GGAGTGTGAATTAGATGCTTTAAGGCTGGGAAGCAAGCTCAAAATGTACCTTCGAGGAGCCGTCGAGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CAA 90 bp CACCCGGTCATCATCCTGCTCAATATAGGCCATCTCCATGTGCACTaGGCAGCGCAACAGGATCATGAGACTATCAACCTTTTCCAGAAT +
Preference number: 6 (lower is better)
Translates to: HPVIILLNIGHLHVH*AAQQDHETINLFQN
Trigger: ATTCTGGAAAAGGTTGATAGTCTCATGATCCTGTTGCGCTGCCAAGTGCACATGGAGATGGCCTATATTGAGCAGGATGATGACCGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS TCA 72 bp AGGGCCGCACCATGTTCCAGTAGAGGACAGAAGCATTaGACACCAAGAAGTAATACCTCGGTTCTCCTTTTG +
Preference number: 6 (lower is better)
Translates to: RAAPCSSRGQKH*TPRSNTSVLLL
Trigger: CAAAAGGAGAACCGAGGTATTACTTCTTGGTGTTCAATGCTTCTGTCCTCTACTGGAACATGGTGCGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS TCA 72 bp CCATCTCCATGTGCACTTGGCAGCGCAACAGGATCATaGGACTATCAACCTTTTCCAGAATCTCAGCGATGT +
Preference number: 6 (lower is better)
Translates to: PSPCALGSATGS*DYQPFPESQRC
Trigger: ACATCGCTGAGATTCTGGAAAAGGTTGATAGTCTCATGATCCTGTTGCGCTGCCAAGTGCACATGGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS GCA 72 bp TGCAGGATGTTGTCCATTCTCTTTATGATGAGTAGCTaGTCCTCGACGGCTCCTCGAAGGTACATTTTGAGC +
Preference number: 6 (lower is better)
Translates to: CRMLSILFMMSS*SSTAPRRYILS
Trigger: GCTCAAAATGTACCTTCGAGGAGCCGTCGAGGAGCAGCTACTCATCATAAAGAGAATGGACAACATCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS GCA 72 bp TCTTTCTTAAATGCAATCTCTTTTCTGCAGCTGGCCTaGTCCATGTCCCCGAAGTATGCCTGTCCAATCACC +
Preference number: 6 (lower is better)
Translates to: SFLNAISFLQLA*SMSPKYACPIT
Trigger: GGTGATTGGACAGGCATACTTCGGGGACATGGAGCAGGCCAGCTGCAGAAAAGAGATTGCATTTAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp CTGAGATTTCTTTTCTACGATCTTCGGAGGATAAGATaGCCTCAGCCAGAGTCAGGGTGGACTTGTACCAGA +
Preference number: 6 (lower is better)
Translates to: LRFLFYDLRRIR*PQPESGWTCTR
Trigger: TCTGGTACAAGTCCACCCTGACTCTGGCTGAGGCCATCTTATCCTCCGAAGATCGTAGAAAAGAAATCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp TCTGCCTTTATTTTTCCCTGCATCACCCACAGCTGTTaGCATCTGATTTCTGCTTTCTGGGAAGGTGAGCTG +
Preference number: 6 (lower is better)
Translates to: SAFIFPCITHSC*HLISAFWEGEL
Trigger: CAGCTCACCTTCCCAGAAAGCAGAAATCAGATGCCAACAGCTGTGGGTGATGCAGGGAAAAATAAAGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 72 bp CCATTTTCTTCAGGTATTGGAGGCAGTCACTGGCTATaGGCTCATTTTTCAAAGTCAGACACAGGCGGCCCA +
Preference number: 6 (lower is better)
Translates to: PFSSGIGGSHWL*AHFSKSDTGGP
Trigger: TGGGCCGCCTGTGTCTGACTTTGAAAAATGAGCCAATAGCCAGTGACTGCCTCCAATACCTGAAGAAAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS CAA 72 bp AGTAGCTGCTCCTCGACGGCTCCTCGAAGGTACATTTaGAGCTTGCTTCCCAGCCTTAAAGCATCTAATTCA +
Preference number: 6 (lower is better)
Translates to: SSCSSTAPRRYI*SLLPSLKASNS
Trigger: TGAATTAGATGCTTTAAGGCTGGGAAGCAAGCTCAAAATGTACCTTCGAGGAGCCGTCGAGGAGCAGCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CAA 72 bp AGGGCCTTCTTTCCTGGAGTCTTCTTCTTTAAGTCCTaGCTCTTGACCTCCTTCTTCATACTGCCTTCTCGC +
Preference number: 6 (lower is better)
Translates to: RAFFPGVFFFKS*LLTSFFILPSR
Trigger: GCGAGAAGGCAGTATGAAGAAGGAGGTCAAGAGCAAGGACTTAAAGAAGAAGACTCCAGGAAAGAAGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 90 bp TTTATGATGAGTAGCTGCTCCTCGACGGCTCCTCGAAGGTACATTTaGAGCTTGCTTCCCAGCCTTAAAGCATCTAATTCACACTCCAGA +
Preference number: 6 (lower is better)
Translates to: FMMSSCSSTAPRRYI*SLLPSLKASNSHSR
Trigger: TCTGGAGTGTGAATTAGATGCTTTAAGGCTGGGAAGCAAGCTCAAAATGTACCTTCGAGGAGCCGTCGAGGAGCAGCTACTCATCATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CCA 72 bp CATTTTCTTCAGGTATTGGAGGCAGTCACTGGCTATTaGCTCATTTTTCAAAGTCAGACACAGGCGGCCCAA +
Preference number: 6 (lower is better)
Translates to: HFLQVLEAVTGY*LIFQSQTQAAQ
Trigger: TTGGGCCGCCTGTGTCTGACTTTGAAAAATGAGCCAATAGCCAGTGACTGCCTCCAATACCTGAAGAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS CAA 72 bp ATCATCCTGCTCAATATAGGCCATCTCCATGTGCACTaGGCAGCGCAACAGGATCATGAGACTATCAACCTT +
Preference number: 6 (lower is better)
Translates to: IILLNIGHLHVH*AAQQDHETINL
Trigger: AAGGTTGATAGTCTCATGATCCTGTTGCGCTGCCAAGTGCACATGGAGATGGCCTATATTGAGCAGGATGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CAA 72 bp AGGCCCTTTCCAGTCTCTCCATTTATCTTCAAGATCTaGTCTTGCGCTATCAGTGCCTTCACCTCTACAGAG +
Preference number: 6 (lower is better)
Translates to: RPFPVSPFIFKI*SCAISAFTSTE
Trigger: CTCTGTAGAGGTGAAGGCACTGATAGCGCAAGACAAGATCTTGAAGATAAATGGAGAGACTGGAAAGGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp CAGACACAGGCGGCCCAATTCAAAAAGCAAAAGGATTaGTTTCAGCGAATTGATGTGGTAAGTGATGGAGAG +
Preference number: 6 (lower is better)
Translates to: QTQAAQFKKQKD*FQRIDVVSDGE
Trigger: CTCTCCATCACTTACCACATCAATTCGCTGAAAGCAATCCTTTTGCTTTTTGAATTGGGCCGCCTGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130453.8
CDS GCA 72 bp AAACTTGACGAGTTAATCGTGCAGTCACTCTTGTCTTaGTTGAACACATGCAGCAGATCTTCAGAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: KLDELIVQSLLS*LNTCSRSSEQE
Trigger: CTCCTGCTCTGAAGATCTGCTGCATGTGTTCAAGCAAGACAAGAGTGACTGCACGATTAACTCGTCAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp TTTCCAGTCTCTCCATTTATCTTCAAGATCTTGTCTTaGGCTATCAGTGCCTTCACCTCTACAGAGTCGGAG +
Preference number: 6 (lower is better)
Translates to: FPVSPFIFKILS*AISAFTSTESE
Trigger: CTCCGACTCTGTAGAGGTGAAGGCACTGATAGCGCAAGACAAGATCTTGAAGATAAATGGAGAGACTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CCA 72 bp CGGTTTCCATTTTCTTCAGGTATTGGAGGCAGTCACTaGCTATTGGCTCATTTTTCAAAGTCAGACACAGGC +
Preference number: 6 (lower is better)
Translates to: RFPFSSGIGGSH*LLAHFSKSDTG
Trigger: GCCTGTGTCTGACTTTGAAAAATGAGCCAATAGCCAGTGACTGCCTCCAATACCTGAAGAAAATGGAAACCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS CCA 72 bp CCAATAGGATCATCATCTGGCATTCTTGCAGATTCATaGCTACCAGTCTTTCTATTTCCAGGTGGGACAGGA +
Preference number: 6 (lower is better)
Translates to: PIGSSSGILADS*LPVFLFPGGTG
Trigger: TCCTGTCCCACCTGGAAATAGAAAGACTGGTAGCCATGAATCTGCAAGAATGCCAGATGATGATCCTATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CAA 72 bp CTTTCCAGTCTCTCCATTTATCTTCAAGATCTTGTCTaGCGCTATCAGTGCCTTCACCTCTACAGAGTCGGA +
Preference number: 6 (lower is better)
Translates to: LSSLSIYLQDLV*RYQCLHLYRVG
Trigger: TCCGACTCTGTAGAGGTGAAGGCACTGATAGCGCAAGACAAGATCTTGAAGATAAATGGAGAGACTGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 90 bp CTTCGGTTTCCATTTTCTTCAGGTATTGGAGGCAGTCACTGGCTATaGGCTCATTTTTCAAAGTCAGACACAGGCGGCCCAATTCAAAAA +
Preference number: 6 (lower is better)
Translates to: LRFPFSSGIGGSHWL*AHFSKSDTGGPIQK
Trigger: TTTTTGAATTGGGCCGCCTGTGTCTGACTTTGAAAAATGAGCCAATAGCCAGTGACTGCCTCCAATACCTGAAGAAAATGGAAACCGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS TCA 72 bp TCGTTCTGGAGGGCCCTGAAAGTATCTATGAGTTTCTaGAACAGGCTGCAGACTGAGATTTCTTTTCTACGA +
Preference number: 6 (lower is better)
Translates to: SFWRALKVSMSF*NRLQTEISFLR
Trigger: TCGTAGAAAAGAAATCTCAGTCTGCAGCCTGTTTCAGAAACTCATAGATACTTTCAGGGCCCTCCAGAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 72 bp TTCTGGAAACTTGACGAGTTAATCGTGCAGTCACTCTaGTCTTGCTTGAACACATGCAGCAGATCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: FWKLDELIVQSL*SCLNTCSRSSE
Trigger: CTCTGAAGATCTGCTGCATGTGTTCAAGCAAGACAAGAGTGACTGCACGATTAACTCGTCAAGTTTCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS CAA 90 bp CTTAAAGCATCTAATTCACACTCCAGACCTTCCATTTCTAGCAGCTaGCCAGTATCTTCGGTTTCCATTTTCTTCAGGTATTGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: LKASNSHSRPSISSS*PVSSVSIFFRYWRQ
Trigger: CTGCCTCCAATACCTGAAGAAAATGGAAACCGAAGATACTGGCAAGCTGCTAGAAATGGAAGGTCTGGAGTGTGAATTAGATGCTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS TCA 72 bp TTCTCGTCTTGGCTACCTGGTTCATTGCATAGTTTATaGATGAGACGAACTGTTTTTCCAAGTGGCTTGCCA +
Preference number: 6 (lower is better)
Translates to: FSSWLPGSLHSL*MRRTVFPSGLP
Trigger: TGGCAAGCCACTTGGAAAAACAGTTCGTCTCATTCATAAACTATGCAATGAACCAGGTAGCCAAGACGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp CTTGTCAAGTCCAATAGGATCATCATCTGGCATTCTTaGAGATTCATGGCTACCAGTCTTTCTATTTCCAGG +
Preference number: 6 (lower is better)
Translates to: LVKSNRIIIWHS*RFMATSLSISR
Trigger: CCTGGAAATAGAAAGACTGGTAGCCATGAATCTGCAAGAATGCCAGATGATGATCCTATTGGACTTGACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000196540.5
CDS CAA 72 bp CTTGCCAGTATCTTCGGTTTCCATTTTCTTCAGGTATaGGAGGCAGTCACTGGCTATTGGCTCATTTTTCAA +
Preference number: 6 (lower is better)
Translates to: LASIFGFHFLQV*EAVTGYWLIFQ
Trigger: TTGAAAAATGAGCCAATAGCCAGTGACTGCCTCCAATACCTGAAGAAAATGGAAACCGAAGATACTGGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CAA 72 bp AAAAATGGGTGCTCGTTAAATTCTTCGTCAGTCAGGTaGCAGGCAAATTGGATTCGAAGTTTCACACACCTG +
Preference number: 6 (lower is better)
Translates to: KNGCSLNSSSVR*QANWIRSFTHL
Trigger: CAGGTGTGTGAAACTTCGAATCCAATTTGCCTGCAACCTGACTGACGAAGAATTTAACGAGCACCCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS TCA 72 bp TCTTCTCTGATGGTAGGGACGTGTTGGTCATGGTACTaGCTTAAATCTCTATACATTTTCCTCAGGATTTGC +
Preference number: 6 (lower is better)
Translates to: SSLMVGTCWSWY*LKSLYIFLRIC
Trigger: GCAAATCCTGAGGAAAATGTATAGAGATTTAAGTCAGTACCATGACCAACACGTCCCTACCATCAGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS TCA 72 bp TATGTAGTACAAACTGTACGTAGGCTTCTGGAAACTTaGCGAGTTAATCGTGCAGTCACTCTTGTCTTGCTT +
Preference number: 6 (lower is better)
Translates to: YVVQTVRRLLET*RVNRAVTLVLL
Trigger: AAGCAAGACAAGAGTGACTGCACGATTAACTCGTCAAGTTTCCAGAAGCCTACGTACAGTTTGTACTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129990.9
CDS GCA 72 bp CTAATTCACACTCCAGACCTTCCATTTCTAGCAGCTTaGCAGTATCTTCGGTTTCCATTTTCTTCAGGTATT +
Preference number: 6 (lower is better)
Translates to: LIHTPDLPFLAA*QYLRFPFSSGI
Trigger: AATACCTGAAGAAAATGGAAACCGAAGATACTGGCAAGCTGCTAGAAATGGAAGGTCTGGAGTGTGAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CCA 72 bp TTGCCAGTATCTTCGGTTTCCATTTTCTTCAGGTATTaGAGGCAGTCACTGGCTATTGGCTCATTTTTCAAA +
Preference number: 6 (lower is better)
Translates to: LPVSSVSIFFRY*RQSLAIGSFFK
Trigger: TTTGAAAAATGAGCCAATAGCCAGTGACTGCCTCCAATACCTGAAGAAAATGGAAACCGAAGATACTGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CAA 72 bp TCTAATTCACACTCCAGACCTTCCATTTCTAGCAGCTaGCCAGTATCTTCGGTTTCCATTTTCTTCAGGTAT +
Preference number: 6 (lower is better)
Translates to: SNSHSRPSISSS*PVSSVSIFFRY
Trigger: ATACCTGAAGAAAATGGAAACCGAAGATACTGGCAAGCTGCTAGAAATGGAAGGTCTGGAGTGTGAATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CAA 90 bp CGCTTTCAGCGAATTGATGTGGTAAGTGATGGAGAGTATAATGGATaGCTGCTTGTCTTCCCTCAACATAAGATCATCCAATACTTCATA +
Preference number: 6 (lower is better)
Translates to: RFQRIDVVSDGEYNG*LLVFPQHKIIQYFI
Trigger: TATGAAGTATTGGATGATCTTATGTTGAGGGAAGACAAGCAGCAATCCATTATACTCTCCATCACTTACCACATCAATTCGCTGAAAGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129990.9
ENSMUST00000140820.8
CDS CAA 72 bp CGAATTGATGTGGTAAGTGATGGAGAGTATAATGGATaGCTGCTTGTCTTCCCTCAACATAAGATCATCCAA +
Preference number: 6 (lower is better)
Translates to: RIDVVSDGEYNG*LLVFPQHKIIQ
Trigger: TTGGATGATCTTATGTTGAGGGAAGACAAGCAGCAATCCATTATACTCTCCATCACTTACCACATCAATTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8
CDS CAA 90 bp TGCTTTCAGCGAATTGATGTGGTAAGTGATGGAGAGTATAATGGATaGCTGCTTGTCTTCCCTCAACATAAGATCATCCAATACTTCATA +
Preference number: 6 (lower is better)
Translates to: CFQRIDVVSDGEYNG*LLVFPQHKIIQYFI
Trigger: TATGAAGTATTGGATGATCTTATGTTGAGGGAAGACAAGCAGCAATCCATTATACTCTCCATCACTTACCACATCAATTCGCTGAAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130453.8
CDS CCA 72 bp AGAAGTAATACCTCGGTTCTCCTTTTGCAAAGTTTATaGCCTTCATGTACTGTGTCACGCAATTTTCAAATT +
Preference number: 6 (lower is better)
Translates to: RSNTSVLLLQSL*PSCTVSRNFQI
Trigger: AATTTGAAAATTGCGTGACACAGTACATGAAGGCCATAAACTTTGCAAAAGGAGAACCGAGGTATTACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129990.9
ENSMUST00000130453.8
ENSMUST00000140820.8