Pregenerated sensors for CFAP45 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026546Ensembl transcript IDs: ENSMUST00000085894.12, ENSMUST00000159395.2, ENSMUST00000159792.8, ENSMUST00000160303.2, ENSMUST00000161140.8, ENSMUST00000162988.8
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTCTGGGCCCGTTCCCTaGCCACCTCCTCCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASSGPVP*PPPPGH Trigger: GTGACCTGGAGGAGGTGGCCAGGGAACGGGCCCAGA...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACTCTGCAGGAGGTTCTaGGCCCGTTCCCTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGALCRRF*ARSLAT Trigger: GGTGGCCAGGGAACGGGCCCAGAACCTCCTGCAGAG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR TCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCCCAGCGTGTGTTCCTTaGATGCCACCTGCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASPACVP*MPPAPA Trigger: GGCTGGAGCAGGTGGCATTCAAGGAACACACGCTGG...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCCTGCAACCTCCTGGTTaGGCTTGGCCCGCAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASLQPPG*AWPARH Trigger: ATGCCTTGCGGGCCAAGCGCAACCAGGAGGTTGCAG...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACCTCCTGGTTGCGCTTaGCCCGCAAGGCATCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGAPPGCA*PARHPA Trigger: AGCAGGATGCCTTGCGGGCCAAGCGCAACCAGGAGG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTTGTCGGCTCTCTaGAGGAGGTTCTGGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGASLSAL*RRFWAR Trigger: ACGGGCCCAGAACCTCCTGCAGAGAGCCGACAAGCT...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACGATCTGCAACCTCCTaGTTGCGCTTGGCCCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGARSATS*LRLARK Trigger: CTTGCGGGCCAAGCGCAACCAGGAGGTTGCAGATCG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTCTCAGGAAGGCCGGTaGCTCTCAGCTCTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASSQEGR*LSALPA Trigger: AGCTGGAAGAGCTGAGAGCCACCGGCCTTCCTGAGA...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACTGGGCATCCCGGATTaGGTGGCACTTGGCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGALGIPD*VALGIQ Trigger: CTGAATGCCAAGTGCCACGCAATCCGGGATGCCCAG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCCATCACCATCTGGTCTaGCAGTCTCTCCTGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASHHHLV*QSLLCQ Trigger: CTGGCACAGGAGAGACTGGCAGACCAGATGGTGATG...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCACGCCACTCTCGATCTaGAACCTCCTGGTTGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASTPLSI*NLLVAL Trigger: AAGCGCAACCAGGAGGTTGCAGATCGAGAGTGGCGT...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCATCCTTGAATGCCACCTaGTCCAGCCGGCTTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGASLNAT*SSRLLR Trigger: GCGCAAAAGCCGGCTGGAGCAGGTGGCATTCAAGGA...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACGTGTGTTCCTTGAATaGCACCTGCTCCAGCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGARVFLE*HLLQPA Trigger: AGCCGGCTGGAGCAGGTGGCATTCAAGGAACACACG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTGCTTCTCCAGAATCTaGGCATCCCGGATTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASCFSRI*ASRIAW Trigger: CCACGCAATCCGGGATGCCCAGATTCTGGAGAAGCA...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCGCTGGAGGCACCCCTTaGCTTTCTTCTCCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASAGGTP*LSSPVP Trigger: AGGAACAGGAGAAGAAAGCCAAGGGGTGCCTCCAGC...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTCGTTGGCATGCTaGAGGCACCCCTTGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGASSLAC*RHPLAF Trigger: GAAAGCCAAGGGGTGCCTCCAGCATGCCAACGAGCT...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR TCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACTTGGGATGCCCATTTaGTCCGCTCAAACTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGALGMPI*SAQTPR Trigger: CCGAGGAGTTTGAGCGGATCAAATGGGCATCCCAAG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR TCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACCAGCTTCTGTTTCTTaGTGTCCTCGATGCGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGAPASVS*CPRCAR Trigger: GCGAGCGCATCGAGGACATCAAGAAACAGAAGCTGG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCATTGAGCTCCTCCTCCTaGTCCATACGGAGCTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGALSSSS*SIRSLS Trigger: CGACAAGCTCCGTATGGAGCAGGAGGAGGAGCTCAA...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCATGCACGTGTTTCTGCTaGTTCTCACGCACCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGACTCFC*FSRTCR Trigger: ACGGCAGGTGCGTGAGAACCAGCAGAAACACGTGCA...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACTTCGTTCCAGATCCTaGAAATCCTCCTCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGALRSRS*KSSSWS Trigger: GCTCCAGGAGGAGGATTTGCAGGATCTGGAACGAAG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCATGCCAGTCTCTCCTGTaGCAGCATCTCTGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGACQSLL*QHLCFL Trigger: CAGAAAGCAGAGATGCTGGCACAGGAGAGACTGGCA...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTCTTTGGTCAGGACTTaGGATGCCCATTTGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASSLVRT*DAHLIR Trigger: GCGGATCAAATGGGCATCCCAAGTCCTGACCAAAGA...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTGGCTGGCAGGATGTTaGCTTTACGCTCAACTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASWLAGC*LYAQLR Trigger: TCGAAGTTGAGCGTAAAGCCAACATCCTGCCAGCCA...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR TCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACCTCCTCCAGGTCACTaGGCTTCTTGTTATTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGAPPPGH*ASCYCS Trigger: GGAACAATAACAAGAAGCTCAGTGACCTGGAGGAGG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCCTGTGCCAGCATCTCTaGTTTCTGTCTCTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASLCQHL*FLSLVF Trigger: GAAAACCAGAGACAGAAAGCAGAGATGCTGGCACAG...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACAAGGCATCCTGCTCTaGTTGATAATCCTGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGAQGILL*LIILRL Trigger: AAGGCGCAGGATTATCAAGCAGAGCAGGATGCCTTG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTTCTTCTCCTGTTCCTaGTTCTCCCTCTCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASFFSCS*FSLSIC Trigger: GCAGATTGAGAGGGAGAAGCAGGAACAGGAGAAGAA...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAGCATCCCGGATTGCGTaGCACTTGGCATTCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGAASRIA*HLAFRI Trigger: TATTCTGAATGCCAAGTGCCACGCAATCCGGGATGC...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCGTTAACAGAAGTGGCTaGCAGGATGTTGGCTTTACG | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASVNRSG*QDVGFT Trigger: CGTAAAGCCAACATCCTGCCAGCCACTTCTGTTAAC...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR TCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCATCTATTTCCATCATGTaGTCCAACCGCCTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGASISIM*SNRLSS Trigger: AGAGGAGAGGCGGTTGGATCACATGATGGAAATAGA...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTCCTTTTGTATCTGCTaGTTCTCCAGAATCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CNYEMCRLAAVWMPRGASSFCIC*FSRIWA Trigger: TGCCCAGATTCTGGAGAAGCAGCAGATACAAAAGGA...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACATTCAGTTCTTCTTTaGTCAGGACTTGGGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGAHSVLL*SGLGMP Trigger: GGGCATCCCAAGTCCTGACCAAAGAAGAACTGAATG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAATTCCTTTTGTATCTaGTGCTTCTCCAGAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ICNYEMCRLAAVWMPRGANSFCI*CFSRIW Trigger: CCAGATTCTGGAGAAGCAGCAGATACAAAAGGAATT...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 90 bp | CGGCGGCCCTCTTCGAAGGTAGCGAGCCGGTTCTGCACGTGTTTCTaGTGGTTCTCACGCACCTGCCGTCGGAGCTCGTTGGCATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRPSSKVASRFCTCF*WFSRTCRRSSLACW Trigger: CCAGCATGCCAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAAACACGTGCAGAACCGGCTCGCTACCTTCGAAGAGGGCCGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 90 bp | TCCTCCTTGAGGCGGCGGCCCTCTTCGAAGGTAGCGAGCCGGTTCTaGACGTGTTTCTGCTGGTTCTCACGCACCTGCCGTCGGAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSLRRRPSSKVASRF*TCFCWFSRTCRRSS Trigger: CGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAAACACGTGCAGAACCGGCTCGCTACCTTCGAAGAGGGCCGCCGCCTCAAGGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 90 bp | TCCTTGAGCTCCTCCTCCTGCTCCATACGGAGCTTGTCGGCTCTCTaGAGGAGGTTCTGGGCCCGTTCCCTGGCCACCTCCTCCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSSSSCSIRSLSAL*RRFWARSLATSSRS Trigger: TGACCTGGAGGAGGTGGCCAGGGAACGGGCCCAGAACCTCCTGCAGAGAGCCGACAAGCTCCGTATGGAGCAGGAGGAGGAGCTCAAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 90 bp | CGGCCCTCTTCGAAGGTAGCGAGCCGGTTCTGCACGTGTTTCTGCTaGTTCTCACGCACCTGCCGTCGGAGCTCGTTGGCATGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPSSKVASRFCTCFC*FSRTCRRSSLACWR Trigger: CCTCCAGCATGCCAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAAACACGTGCAGAACCGGCTCGCTACCTTCGAAGAGGGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 90 bp | GTAGCGAGCCGGTTCTGCACGTGTTTCTGCTGGTTCTCACGCACCTaGCGTCGGAGCTCGTTGGCATGCTGGAGGCACCCCTTGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VASRFCTCFCWFSRT*RRSSLACWRHPLAF Trigger: GAAAGCCAAGGGGTGCCTCCAGCATGCCAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAAACACGTGCAGAACCGGCTCGCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 90 bp | TCCTCCTGCTCCATACGGAGCTTGTCGGCTCTCTGCAGGAGGTTCTaGGCCCGTTCCCTGGCCACCTCCTCCAGGTCACTGAGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSCSIRSLSALCRRF*ARSLATSSRSLSFL Trigger: CAAGAAGCTCAGTGACCTGGAGGAGGTGGCCAGGGAACGGGCCCAGAACCTCCTGCAGAGAGCCGACAAGCTCCGTATGGAGCAGGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 |
||
| CDS CCA 90 bp | TTCTGCTGGTTCTCACGCACCTGCCGTCGGAGCTCGTTGGCATGCTaGAGGCACCCCTTGGCTTTCTTCTCCTGTTCCTGCTTCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FCWFSRTCRRSSLAC*RHPLAFFSCSCFSL Trigger: GAGGGAGAAGCAGGAACAGGAGAAGAAAGCCAAGGGGTGCCTCCAGCATGCCAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 90 bp | GCACGTGTTTCTGCTGGTTCTCACGCACCTGCCGTCGGAGCTCGTTaGCATGCTGGAGGCACCCCTTGGCTTTCTTCTCCTGTTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARVSAGSHAPAVGAR*HAGGTPWLSSPVPA Trigger: AGCAGGAACAGGAGAAGAAAGCCAAGGGGTGCCTCCAGCATGCCAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAAACACGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 90 bp | TGTTTCTGCTGGTTCTCACGCACCTGCCGTCGGAGCTCGTTGGCATaGTGGAGGCACCCCTTGGCTTTCTTCTCCTGTTCCTGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFCWFSRTCRRSSLA*WRHPLAFFSCSCFS Trigger: GGAGAAGCAGGAACAGGAGAAGAAAGCCAAGGGGTGCCTCCAGCATGCCAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS TCA 90 bp | ACTCATCTCGGTCACGCTGAACCTGAACGGCCAGCGTGTGTTCCTTaGATGCCACCTGCTCCAGCCGGCTTTTGCGCAGCTTTTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: THLGHAEPERPACVP*MPPAPAGFCAAFPL Trigger: CAGAGGAAAAGCTGCGCAAAAGCCGGCTGGAGCAGGTGGCATTCAAGGAACACACGCTGGCCGTTCAGGTTCAGCGTGACCGAGATGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 90 bp | CTTCTTCTGCGCATTTTCCTTTTCCTTTCGACGCCACTCTCGATCTaGAACCTCCTGGTTGCGCTTGGCCCGCAAGGCATCCTGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLRIFLFLSTPLSI*NLLVALGPQGILLC Trigger: GCAGAGCAGGATGCCTTGCGGGCCAAGCGCAACCAGGAGGTTGCAGATCGAGAGTGGCGTCGAAAGGAAAAGGAAAATGCGCAGAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 90 bp | TTTCCTTTCGACGCCACTCTCGATCTGCAACCTCCTGGTTGCGCTTaGCCCGCAAGGCATCCTGCTCTGCTTGATAATCCTGCGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FPFDATLDLQPPGCA*PARHPALLDNPAPS Trigger: AGAAGGCGCAGGATTATCAAGCAGAGCAGGATGCCTTGCGGGCCAAGCGCAACCAGGAGGTTGCAGATCGAGAGTGGCGTCGAAAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 90 bp | TTTCCTTTTCCTTTCGACGCCACTCTCGATCTGCAACCTCCTGGTTaGGCTTGGCCCGCAAGGCATCCTGCTCTGCTTGATAATCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: FPFPFDATLDLQPPG*AWPARHPALLDNPA Trigger: CGCAGGATTATCAAGCAGAGCAGGATGCCTTGCGGGCCAAGCGCAACCAGGAGGTTGCAGATCGAGAGTGGCGTCGAAAGGAAAAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACCGATCCTCCTGCCTTaGGAGGGATTCCCGCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ICNYEMCRLAAVWMPRGAPILLP*EGFPPV Trigger: GACCGGCGGGAATCCCTCCAAAGGCAGGAGGATCGG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAACCTCCTGGTTGCGCTaGGCCCGCAAGGCATCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ICNYEMCRLAAVWMPRGATSWLR*ARKASC Trigger: GCAGGATGCCTTGCGGGCCAAGCGCAACCAGGAGGT...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTTCTCAGCTTCCTCCTaGAGGCGGCGGCCCTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: CNYEMCRLAAVWMPRGASFSASS*RRRPSS Trigger: CGAAGAGGGCCGCCGCCTCAAGGAGGAAGCTGAGAA...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 90 bp | TCCAAGCCCAGAGCACTGAGAGTTTTCCGGATAGCGTGTTTATCATaGATCACCACGATAGGGCTGTCGCTCTTGCCCTGGGATGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKPRALRVFRIACLS*ITTIGLSLLPWDEG Trigger: GCCTTCATCCCAGGGCAAGAGCGACAGCCCTATCGTGGTGATCCATGATAAACACGCTATCCGGAAAACTCTCAGTGCTCTGGGCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS-3UTR CAA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCCGGTGGAAGCAGAGCTaGAGGCATCCCCTGGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CNYEMCRLAAVWMPRGASRWKQS*RHPLAL Trigger: TAAGGCCAGGGGATGCCTCAAGCTCTGCTTCCACCG...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCATCTGCAACCTCCTGGTaGCGCTTGGCCCGCAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ICNYEMCRLAAVWMPRGASATSW*RLARKA Trigger: TGCCTTGCGGGCCAAGCGCAACCAGGAGGTTGCAGA...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCGCCAGCGTGTGTTCCTaGAATGCCACCTGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CNYEMCRLAAVWMPRGASASVCS*NATCSS Trigger: GCTGGAGCAGGTGGCATTCAAGGAACACACGCTGGC...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 90 bp | CTCAGGCGGGCGATCTCCTTCTCTTTCTCCCTCCGGATTTTCTCCTaGTCAGCTTCATACTCTGCCTCTCGAGCCATCTTCTTCTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRRAISFSFSLRIFS*SASYSASRAIFFLV Trigger: TACCAAGAAGAAGATGGCTCGAGAGGCAGAGTATGAAGCTGAGCAGGAGAAAATCCGGAGGGAGAAAGAGAAGGAGATCGCCCGCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085894.12 ENSMUST00000160303.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCATGCTCCATACGGAGCTaGTCGGCTCTCTGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ICNYEMCRLAAVWMPRGACSIRS*SALCRR Trigger: CCTCCTGCAGAGAGCCGACAAGCTCCGTATGGAGCA...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTCTGGGCATCCCGGATaGCGTGGCACTTGGCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: CNYEMCRLAAVWMPRGASSGHPG*RGTWHS Trigger: TGAATGCCAAGTGCCACGCAATCCGGGATGCCCAGA...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCATCTTGCTCATGTCCTaGAGCTCCTCCTCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CNYEMCRLAAVWMPRGASILLMS*SSSSCS Trigger: GGAGCAGGAGGAGGAGCTCAAGGACATGAGCAAGAT...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCGTGGCTGGCAGGATGTaGGCTTTACGCTCAACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: CNYEMCRLAAVWMPRGASVAGRM*ALRSTS Trigger: CGAAGTTGAGCGTAAAGCCAACATCCTGCCAGCCAC...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS TCA 90 bp | TCCTCCTGCCTTTGGAGGGATTCCCGCCGGTCTATTTCCATCATGTaGTCCAACCGCCTCTCCTCTTCATCCAATTCCTTTTGTATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCLWRDSRRSISIM*SNRLSSSSNSFCIC Trigger: GCAGATACAAAAGGAATTGGATGAAGAGGAGAGGCGGTTGGATCACATGATGGAAATAGACCGGCGGGAATCCCTCCAAAGGCAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 90 bp | TCTCTGACCATGTCTCTAGTGATGAGCTGGATCGTCTCCGTCTTGTaGTCCAAGCCCAGAGCACTGAGAGTTTTCCGGATAGCGTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SLTMSLVMSWIVSVL*SKPRALRVFRIACL Trigger: TAAACACGCTATCCGGAAAACTCTCAGTGCTCTGGGCTTGGAGCACAAGACGGAGACGATCCAGCTCATCACTAGAGACATGGTCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS CCA 90 bp | TTGAGGGCCTGTTCTCTGGCATTCAGTTCTTCTTTGGTCAGGACTTaGGATGCCCATTTGATCCGCTCAAACTCCTCGGGGCTGATGATT | + |
|
Preference number: 5 (lower is better) Translates to: LRACSLAFSSSLVRT*DAHLIRSNSSGLMI Trigger: AATCATCAGCCCCGAGGAGTTTGAGCGGATCAAATGGGCATCCCAAGTCCTGACCAAAGAAGAACTGAATGCCAGAGAACAGGCCCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS-3UTR CAA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCACTTGGGATGCCCATTaGATCCGCTCAAACTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CNYEMCRLAAVWMPRGASTWDAH*IRSNSS Trigger: CGAGGAGTTTGAGCGGATCAAATGGGCATCCCAAGT...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTCCAGCTTCTGTTTCTaGATGTCCTCGATGCGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CNYEMCRLAAVWMPRGASSSFCF*MSSMRS Trigger: CGAGCGCATCGAGGACATCAAGAAACAGAAGCTGGA...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCTTCTTTGGTCAGGACTaGGGATGCCCATTTGATCCG | + |
|
Preference number: 5 (lower is better) Translates to: CNYEMCRLAAVWMPRGASFFGQD*GCPFDP Trigger: CGGATCAAATGGGCATCCCAAGTCCTGACCAAAGAA...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 90 bp | TTTTGTATCTGCTGCTTCTCCAGAATCTGGGCATCCCGGATTGCGTaGCACTTGGCATTCAGAATAATCTTGCTCATGTCCTTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FCICCFSRIWASRIA*HLAFRIILLMSLSS Trigger: GGAGCTCAAGGACATGAGCAAGATTATTCTGAATGCCAAGTGCCACGCAATCCGGGATGCCCAGATTCTGGAGAAGCAGCAGATACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 90 bp | TTCCTTTTGTATCTGCTGCTTCTCCAGAATCTGGGCATCCCGGATTaGGTGGCACTTGGCATTCAGAATAATCTTGCTCATGTCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLLYLLLLQNLGIPD*VALGIQNNLAHVLE Trigger: CTCAAGGACATGAGCAAGATTATTCTGAATGCCAAGTGCCACGCAATCCGGGATGCCCAGATTCTGGAGAAGCAGCAGATACAAAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | TGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGCCTGAGCTTCTTGTTATaGTTCCAAGTCATCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CNYEMCRLAAVWMPRGASLSFLL*FQVISF Trigger: GAAGGAGATGACTTGGAACAATAACAAGAAGCTCAG...GCTTGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAGCATTCAGAATAATCTaGCTCATGTCCTTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ICNYEMCRLAAVWMPRGAAFRII*LMSLSS Trigger: GGAGCTCAAGGACATGAGCAAGATTATTCTGAATGC...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCACGAGCCATCTTCTTCTaGGTAAATTCCATCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: ICNYEMCRLAAVWMPRGARAIFF*VNSITI Trigger: GATGGTGATGGAATTTACCAAGAAGAAGATGGCTCG...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS-3UTR CAA 90 bp | ATCTGTAACTATGAAATGTGTAGGTTAGCAGCAGTTTGGATGCCCCGGGGAGCAAGGTCACTGAGCTTCTaGTTATTGTTCCAAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: ICNYEMCRLAAVWMPRGARSLSF*LLFQVI Trigger: GATGACTTGGAACAATAACAAGAAGCTCAGTGACCT...TGCTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CAA 72 bp | TCCTCGATGCGCTCGCGGCGCTTCTCAGCTTCCTCCTaGAGGCGGCGGCCCTCTTCGAAGGTAGCGAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SSMRSRRFSASS*RRRPSSKVASR Trigger: CCGGCTCGCTACCTTCGAAGAGGGCCGCCGCCTCAAGGAGGAAGCTGAGAAGCGCCGCGAGCGCATCGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 72 bp | TCCTCCTCCTGCTCCATACGGAGCTTGTCGGCTCTCTaGAGGAGGTTCTGGGCCCGTTCCCTGGCCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSCSIRSLSAL*RRFWARSLATS Trigger: GGAGGTGGCCAGGGAACGGGCCCAGAACCTCCTGCAGAGAGCCGACAAGCTCCGTATGGAGCAGGAGGAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 |
||
| CDS GCA 72 bp | CGGTTCTGCACGTGTTTCTGCTGGTTCTCACGCACCTaGCGTCGGAGCTCGTTGGCATGCTGGAGGCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: RFCTCFCWFSRT*RRSSLACWRHP Trigger: GGGGTGCCTCCAGCATGCCAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAAACACGTGCAGAACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 72 bp | AGGCGGCGGCCCTCTTCGAAGGTAGCGAGCCGGTTCTaGACGTGTTTCTGCTGGTTCTCACGCACCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RRRPSSKVASRF*TCFCWFSRTCR Trigger: ACGGCAGGTGCGTGAGAACCAGCAGAAACACGTGCAGAACCGGCTCGCTACCTTCGAAGAGGGCCGCCGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 72 bp | TCCATACGGAGCTTGTCGGCTCTCTGCAGGAGGTTCTaGGCCCGTTCCCTGGCCACCTCCTCCAGGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SIRSLSALCRRF*ARSLATSSRSL Trigger: CAGTGACCTGGAGGAGGTGGCCAGGGAACGGGCCCAGAACCTCCTGCAGAGAGCCGACAAGCTCCGTATGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 |
||
| CDS CAA 90 bp | TTCTTGATGTCCTCGATGCGCTCGCGGCGCTTCTCAGCTTCCTCCTaGAGGCGGCGGCCCTCTTCGAAGGTAGCGAGCCGGTTCTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: FLMSSMRSRRFSASS*RRRPSSKVASRFCT Trigger: CGTGCAGAACCGGCTCGCTACCTTCGAAGAGGGCCGCCGCCTCAAGGAGGAAGCTGAGAAGCGCCGCGAGCGCATCGAGGACATCAAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CAA 90 bp | ATCTTGCTCATGTCCTTGAGCTCCTCCTCCTGCTCCATACGGAGCTaGTCGGCTCTCTGCAGGAGGTTCTGGGCCCGTTCCCTGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: ILLMSLSSSSCSIRS*SALCRRFWARSLAT Trigger: GGTGGCCAGGGAACGGGCCCAGAACCTCCTGCAGAGAGCCGACAAGCTCCGTATGGAGCAGGAGGAGGAGCTCAAGGACATGAGCAAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS TCA 72 bp | GGTCACGCTGAACCTGAACGGCCAGCGTGTGTTCCTTaGATGCCACCTGCTCCAGCCGGCTTTTGCGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GHAEPERPACVP*MPPAPAGFCAA Trigger: AGCTGCGCAAAAGCCGGCTGGAGCAGGTGGCATTCAAGGAACACACGCTGGCCGTTCAGGTTCAGCGTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 72 bp | TTCTCACGCACCTGCCGTCGGAGCTCGTTGGCATGCTaGAGGCACCCCTTGGCTTTCTTCTCCTGTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FSRTCRRSSLAC*RHPLAFFSCSC Trigger: GCAGGAACAGGAGAAGAAAGCCAAGGGGTGCCTCCAGCATGCCAACGAGCTCCGACGGCAGGTGCGTGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 72 bp | TCTGCTGGTTCTCACGCACCTGCCGTCGGAGCTCGTTaGCATGCTGGAGGCACCCCTTGGCTTTCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SAGSHAPAVGAR*HAGGTPWLSSP Trigger: AGGAGAAGAAAGCCAAGGGGTGCCTCCAGCATGCCAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 72 bp | TCGAAGGTAGCGAGCCGGTTCTGCACGTGTTTCTGCTaGTTCTCACGCACCTGCCGTCGGAGCTCGTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SKVASRFCTCFC*FSRTCRRSSLA Trigger: TGCCAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAAACACGTGCAGAACCGGCTCGCTACCTTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CAA 72 bp | TTCTGCTGGTTCTCACGCACCTGCCGTCGGAGCTCGTaGGCATGCTGGAGGCACCCCTTGGCTTTCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FCWFSRTCRRSS*ACWRHPLAFFS Trigger: GGAGAAGAAAGCCAAGGGGTGCCTCCAGCATGCCAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CAA 90 bp | TGCACGTGTTTCTGCTGGTTCTCACGCACCTGCCGTCGGAGCTCGTaGGCATGCTGGAGGCACCCCTTGGCTTTCTTCTCCTGTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CTCFCWFSRTCRRSS*ACWRHPLAFFSCSC Trigger: GCAGGAACAGGAGAAGAAAGCCAAGGGGTGCCTCCAGCATGCCAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAAACACGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 72 bp | CCTTTCGACGCCACTCTCGATCTGCAACCTCCTGGTTaGGCTTGGCCCGCAAGGCATCCTGCTCTGCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PFDATLDLQPPG*AWPARHPALLD Trigger: ATCAAGCAGAGCAGGATGCCTTGCGGGCCAAGCGCAACCAGGAGGTTGCAGATCGAGAGTGGCGTCGAAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 72 bp | TCTTCGAAGGTAGCGAGCCGGTTCTGCACGTGTTTCTaGTGGTTCTCACGCACCTGCCGTCGGAGCTCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSKVASRFCTCF*WFSRTCRRSSL Trigger: CAACGAGCTCCGACGGCAGGTGCGTGAGAACCAGCAGAAACACGTGCAGAACCGGCTCGCTACCTTCGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 72 bp | GACGCCACTCTCGATCTGCAACCTCCTGGTTGCGCTTaGCCCGCAAGGCATCCTGCTCTGCTTGATAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: DATLDLQPPGCA*PARHPALLDNP Trigger: AGGATTATCAAGCAGAGCAGGATGCCTTGCGGGCCAAGCGCAACCAGGAGGTTGCAGATCGAGAGTGGCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 72 bp | TTTTCCTTTCGACGCCACTCTCGATCTGCAACCTCCTaGTTGCGCTTGGCCCGCAAGGCATCCTGCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FSFRRHSRSATS*LRLARKASCSA Trigger: AGCAGAGCAGGATGCCTTGCGGGCCAAGCGCAACCAGGAGGTTGCAGATCGAGAGTGGCGTCGAAAGGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 72 bp | CGCATTTTCCTTTTCCTTTCGACGCCACTCTCGATCTaGAACCTCCTGGTTGCGCTTGGCCCGCAAGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RIFLFLSTPLSI*NLLVALGPQGI Trigger: GATGCCTTGCGGGCCAAGCGCAACCAGGAGGTTGCAGATCGAGAGTGGCGTCGAAAGGAAAAGGAAAATGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 72 bp | TCATGGATCACCACGATAGGGCTGTCGCTCTTGCCCTaGGATGAAGGCTTGACACCTCCAAAGAGGCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SWITTIGLSLLP*DEGLTPPKRLS Trigger: CGAGAGCCTCTTTGGAGGTGTCAAGCCTTCATCCCAGGGCAAGAGCGACAGCCCTATCGTGGTGATCCATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000162988.8 |
||
| CDS GCA 72 bp | AGCATCTGCTCCTTCTCCTGTTCACGGTGCTCCGCCTaGAGCGATCTCTCCTCCTCGTTCTTCTTTATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SICSFSCSRCSA*SDLSSSFFFIC Trigger: GCAGATAAAGAAGAACGAGGAGGAGAGATCGCTGCAGGCGGAGCACCGTGAACAGGAGAAGGAGCAGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS GCA 72 bp | TGGCTGGCAGGATGTTGGCTTTACGCTCAACTTCGATaGAGTACTTCTCAGGAAGGCCGGTGGCTCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WLAGCWLYAQLR*STSQEGRWLSA Trigger: AGCTGAGAGCCACCGGCCTTCCTGAGAAGTACTGCATCGAAGTTGAGCGTAAAGCCAACATCCTGCCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CAA 72 bp | ACCATGTCTCTAGTGATGAGCTGGATCGTCTCCGTCTaGTGCTCCAAGCCCAGAGCACTGAGAGTTTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TMSLVMSWIVSV*CSKPRALRVFR Trigger: CCGGAAAACTCTCAGTGCTCTGGGCTTGGAGCACAAGACGGAGACGATCCAGCTCATCACTAGAGACATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS CCA 72 bp | AGAGCACTGAGAGTTTTCCGGATAGCGTGTTTATCATaGATCACCACGATAGGGCTGTCGCTCTTGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RALRVFRIACLS*ITTIGLSLLPW Trigger: CCAGGGCAAGAGCGACAGCCCTATCGTGGTGATCCATGATAAACACGCTATCCGGAAAACTCTCAGTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS CAA 90 bp | AGTTCTCTGACCATGTCTCTAGTGATGAGCTGGATCGTCTCCGTCTaGTGCTCCAAGCCCAGAGCACTGAGAGTTTTCCGGATAGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSLTMSLVMSWIVSV*CSKPRALRVFRIAC Trigger: ACACGCTATCCGGAAAACTCTCAGTGCTCTGGGCTTGGAGCACAAGACGGAGACGATCCAGCTCATCACTAGAGACATGGTCAGAGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS CAA 90 bp | CTTGAGGGCCTGTTCTCTGGCATTCAGTTCTTCTTTGGTCAGGACTaGGGATGCCCATTTGATCCGCTCAAACTCCTCGGGGCTGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: LEGLFSGIQFFFGQD*GCPFDPLKLLGADD Trigger: ATCATCAGCCCCGAGGAGTTTGAGCGGATCAAATGGGCATCCCAAGTCCTGACCAAAGAAGAACTGAATGCCAGAGAACAGGCCCTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS CAA 90 bp | TCTCTGGCATTCAGTTCTTCTTTGGTCAGGACTTGGGATGCCCATTaGATCCGCTCAAACTCCTCGGGGCTGATGATTAGCGATTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLAFSSSLVRTWDAH*IRSNSSGLMISDSP Trigger: TGGGGAATCGCTAATCATCAGCCCCGAGGAGTTTGAGCGGATCAAATGGGCATCCCAAGTCCTGACCAAAGAAGAACTGAATGCCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS CAA 90 bp | TCCTTCTCCTTCTTGAGGGCCTGTTCTCTGGCATTCAGTTCTTCTTaGGTCAGGACTTGGGATGCCCATTTGATCCGCTCAAACTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SFSFLRACSLAFSSS*VRTWDAHLIRSNSS Trigger: CGAGGAGTTTGAGCGGATCAAATGGGCATCCCAAGTCCTGACCAAAGAAGAACTGAATGCCAGAGAACAGGCCCTCAAGAAGGAGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS GCA 72 bp | ATGTCTCTAGTGATGAGCTGGATCGTCTCCGTCTTGTaGTCCAAGCCCAGAGCACTGAGAGTTTTCCGGATA | + |
|
Preference number: 6 (lower is better) Translates to: MSLVMSWIVSVL*SKPRALRVFRI Trigger: TATCCGGAAAACTCTCAGTGCTCTGGGCTTGGAGCACAAGACGGAGACGATCCAGCTCATCACTAGAGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS GCA 72 bp | TCTGGCATTCAGTTCTTCTTTGGTCAGGACTTGGGATaGCCATTTGATCCGCTCAAACTCCTCGGGGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SGIQFFFGQDLG*PFDPLKLLGAD Trigger: ATCAGCCCCGAGGAGTTTGAGCGGATCAAATGGGCATCCCAAGTCCTGACCAAAGAAGAACTGAATGCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS GCA 72 bp | AACCGCCTCTCCTCTTCATCCAATTCCTTTTGTATCTaGTGCTTCTCCAGAATCTGGGCATCCCGGATTGCG | + |
|
Preference number: 6 (lower is better) Translates to: NRLSSSSNSFCI*CFSRIWASRIA Trigger: CGCAATCCGGGATGCCCAGATTCTGGAGAAGCAGCAGATACAAAAGGAATTGGATGAAGAGGAGAGGCGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 72 bp | TGTTCTCTGGCATTCAGTTCTTCTTTGGTCAGGACTTaGGATGCCCATTTGATCCGCTCAAACTCCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CSLAFSSSLVRT*DAHLIRSNSSG Trigger: CCCCGAGGAGTTTGAGCGGATCAAATGGGCATCCCAAGTCCTGACCAAAGAAGAACTGAATGCCAGAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS CCA 72 bp | TGCTGCTTCTCCAGAATCTGGGCATCCCGGATTGCGTaGCACTTGGCATTCAGAATAATCTTGCTCATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CCFSRIWASRIA*HLAFRIILLMS Trigger: GGACATGAGCAAGATTATTCTGAATGCCAAGTGCCACGCAATCCGGGATGCCCAGATTCTGGAGAAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CAA 72 bp | CTGTTCTCTGGCATTCAGTTCTTCTTTGGTCAGGACTaGGGATGCCCATTTGATCCGCTCAAACTCCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LFSGIQFFFGQD*GCPFDPLKLLG Trigger: CCCGAGGAGTTTGAGCGGATCAAATGGGCATCCCAAGTCCTGACCAAAGAAGAACTGAATGCCAGAGAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS TCA 72 bp | CTTTGGAGGGATTCCCGCCGGTCTATTTCCATCATGTaGTCCAACCGCCTCTCCTCTTCATCCAATTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LWRDSRRSISIM*SNRLSSSSNSF Trigger: AAAGGAATTGGATGAAGAGGAGAGGCGGTTGGATCACATGATGGAAATAGACCGGCGGGAATCCCTCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CCA 72 bp | TCCAATTCCTTTTGTATCTGCTGCTTCTCCAGAATCTaGGCATCCCGGATTGCGTGGCACTTGGCATTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SNSFCICCFSRI*ASRIAWHLAFR Trigger: TCTGAATGCCAAGTGCCACGCAATCCGGGATGCCCAGATTCTGGAGAAGCAGCAGATACAAAAGGAATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CAA 72 bp | TTCAGTTCTTCTTTGGTCAGGACTTGGGATGCCCATTaGATCCGCTCAAACTCCTCGGGGCTGATGATTAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSSSLVRTWDAH*IRSNSSGLMIS Trigger: GCTAATCATCAGCCCCGAGGAGTTTGAGCGGATCAAATGGGCATCCCAAGTCCTGACCAAAGAAGAACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS CAA 72 bp | TTCTTGAGGGCCTGTTCTCTGGCATTCAGTTCTTCTTaGGTCAGGACTTGGGATGCCCATTTGATCCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FLRACSLAFSSS*VRTWDAHLIRS Trigger: TGAGCGGATCAAATGGGCATCCCAAGTCCTGACCAAAGAAGAACTGAATGCCAGAGAACAGGCCCTCAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||
| CDS CAA 90 bp | GCCCGTTCCCTGGCCACCTCCTCCAGGTCACTGAGCTTCTTGTTATaGTTCCAAGTCATCTCCTTCTGCTTCATAATCTTCTTGCGAATT | + |
|
Preference number: 6 (lower is better) Translates to: ARSLATSSRSLSFLL*FQVISFCFIIFLRI Trigger: AATTCGCAAGAAGATTATGAAGCAGAAGGAGATGACTTGGAACAATAACAAGAAGCTCAGTGACCTGGAGGAGGTGGCCAGGGAACGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 |
||
| CDS GCA 72 bp | TATCTGCTGCTTCTCCAGAATCTGGGCATCCCGGATTaGGTGGCACTTGGCATTCAGAATAATCTTGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: YLLLLQNLGIPD*VALGIQNNLAH Trigger: ATGAGCAAGATTATTCTGAATGCCAAGTGCCACGCAATCCGGGATGCCCAGATTCTGGAGAAGCAGCAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085894.12 |
||
| CDS CAA 72 bp | CTGGCCACCTCCTCCAGGTCACTGAGCTTCTTGTTATaGTTCCAAGTCATCTCCTTCTGCTTCATAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LATSSRSLSFLL*FQVISFCFIIF Trigger: GAAGATTATGAAGCAGAAGGAGATGACTTGGAACAATAACAAGAAGCTCAGTGACCTGGAGGAGGTGGCCAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 |
||
| CDS CAA 72 bp | TTGTTCCAAGTCATCTCCTTCTGCTTCATAATCTTCTaGCGAATTGTGACGGCTTCCAAGATGCCTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LFQVISFCFIIF*RIVTASKMPSF Trigger: GAAGGAAGGCATCTTGGAAGCCGTCACAATTCGCAAGAAGATTATGAAGCAGAAGGAGATGACTTGGAACAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085894.12 ENSMUST00000159395.2 ENSMUST00000159792.8 ENSMUST00000161140.8 ENSMUST00000162988.8 |
||