Pregenerated sensors for CFAP410 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020284Ensembl transcript IDs: ENSMUST00000105397.10, ENSMUST00000105398.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGTGGGCAGCATTTCTGCCAGCCCTCAGCACAGGAGAGGGGTCTaGTTTGCTGGCAGCCACTGGGCCTGCTTTGAAGGCTTTCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: LVGSISASPQHRRGV*FAGSHWACFEGFPG Trigger: ACCTGGAAAGCCTTCAAAGCAGGCCCAGTGGCTGCCAGCAAAGCAGACCCCTCTCCTGTGCTGAGGGCTGGCAGAAATGCTGCCCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CCA 90 bp | GCCAGCCCTCAGCACAGGAGAGGGGTCTGCTTTGCTGGCAGCCACTaGGCCTGCTTTGAAGGCTTTCCAGGTAGGGCTGTGTTTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: ASPQHRRGVCFAGSH*ACFEGFPGRAVFPQ Trigger: CTGAGGAAACACAGCCCTACCTGGAAAGCCTTCAAAGCAGGCCCAGTGGCTGCCAGCAAAGCAGACCCCTCTCCTGTGCTGAGGGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR GCA 90 bp | CCTCAGCACAGGAGAGGGGTCTGCTTTGCTGGCAGCCACTGGGCCTaGTTTGAAGGCTTTCCAGGTAGGGCTGTGTTTCCTCAGGATATA | + |
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Preference number: 1 (lower is better) Translates to: PQHRRGVCFAGSHWA*FEGFPGRAVFPQDI Trigger: TATATCCTGAGGAAACACAGCCCTACCTGGAAAGCCTTCAAAGCAGGCCCAGTGGCTGCCAGCAAAGCAGACCCCTCTCCTGTGCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR GCA 90 bp | AGGTTTCGAAGTGGGCCAGCGGTGGAGCAAAGCCAAGGGCCCAGCTaGCCTGAACCTTCAGCATTAAGACCCTTACAGGTCATCTACAGA | + |
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Preference number: 1 (lower is better) Translates to: RFRSGPAVEQSQGPS*PEPSALRPLQVIYR Trigger: TCTGTAGATGACCTGTAAGGGTCTTAATGCTGAAGGTTCAGGGCAGCTGGGCCCTTGGCTTTGCTCCACCGCTGGCCCACTTCGAAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR GCA 90 bp | CCCCGAGATGCTTCCTGTCCCAGACCTTCCAGCTCAAACAGAAAGTaGTTTATTGGAGGGTATGGCTCCTTCAGGCCTCCCTTGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PRDASCPRPSSSNRK*FIGGYGSFRPPLRK Trigger: CTTCCTCAAGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGTTTGAGCTGGAAGGTCTGGGACAGGAAGCATCTCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CCA 90 bp | GGGGCTGACTTACAGTTTCAGAGGTTTAGCCCATTACCATCATGGTaGGAAGCATGGCGGCATGCAGGCAGATGTGGTGCTGGAGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: GADLQFQRFSPLPSW*EAWRHAGRCGAGEV Trigger: TACCTCTCCAGCACCACATCTGCCTGCATGCCGCCATGCTTCCCACCATGATGGTAATGGGCTAAACCTCTGAAACTGTAAGTCAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
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| 3UTR CCA 90 bp | TGCTTCCTGTCCCAGACCTTCCAGCTCAAACAGAAAGTGCTTTATTaGAGGGTATGGCTCCTTCAGGCCTCCCTTGAGGAAGGGTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: CFLSQTFQLKQKVLY*RVWLLQASLEEGSD Trigger: GTCTGACCCTTCCTCAAGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGTTTGAGCTGGAAGGTCTGGGACAGGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CAA 90 bp | TGGGCAGCATTTCTGCCAGCCCTCAGCACAGGAGAGGGGTCTGCTTaGCTGGCAGCCACTGGGCCTGCTTTGAAGGCTTTCCAGGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: WAAFLPALSTGEGSA*LAATGPALKAFQVG Trigger: CCCTACCTGGAAAGCCTTCAAAGCAGGCCCAGTGGCTGCCAGCAAAGCAGACCCCTCTCCTGTGCTGAGGGCTGGCAGAAATGCTGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGCTTTGGGCCTCAGCAGGTAAGTCCCAGGGACCATGCTGGTGGGCAGCATTTGCTGGCAGCCACTaGGCCTGCTTTGAAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: PELWASAGKSQGPCWWAAFAGSH*ACFEGF Trigger: AAAGCCTTCAAAGCAGGCCCAGTGGCTGCCAGCAAA...TGCTGCCCACCAGCATGGTCCCTGGGACTTACCTGCTGAGGCCCAAAGCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGTGGCCCTGCCTAGGTAAGCTACAGGGCCTCCCCCAATTAATGGCTCTAGGCAGCCACTGGGCCTaGTTTGAAGGCTTTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PRWPCLGKLQGLPQLMALGSHWA*FEGFPG Trigger: ACCTGGAAAGCCTTCAAAGCAGGCCCAGTGGCTGCC...TAGAGCCATTAATTGGGGGAGGCCCTGTAGCTTACCTAGGCAGGGCCACCTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR-3UTR GCA 90 bp | CTCAAACAGAAAGTGCTTTATTGGAGGGTATGGCTCCTTCAGGCCTCCCTTGAGGAGAGGGGTCTGCTTTaGTGGCAGCCACTGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LKQKVLYWRVWLLQASLEERGLL*WQPLGL Trigger: CAGGCCCAGTGGCTGCCAGCAAAGCAGACCCCTCTC...CTCAAGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGTTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGAGGTTTAGCCCATTACCATCATGGTGGGAAGCATGGCGGCATGCAGGCTGCTGGAGAGGTAGCTaGCGGTTCTCCATCTGGATC | + |
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Preference number: 2 (lower is better) Translates to: FQRFSPLPSWWEAWRHAGCWRGS*RFSIWI Trigger: GATCCAGATGGAGAACCGTCAGCTACCTCTCCAGCA...GCCTGCATGCCGCCATGCTTCCCACCATGATGGTAATGGGCTAAACCTCTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAAACAGAAAGTGCTTTATTGGAGGGTATGGCTCCTTCAGGCCTCCCTTGAGCAGGGACCATGCTGGTaGGCAGCATTTCTGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LKQKVLYWRVWLLQASLEQGPCW*AAFLPA Trigger: GGCTGGCAGAAATGCTGCCCACCAGCATGGTCCCTG...CTCAAGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGTTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR-3UTR CCA 90 bp | CCCTTACAGGTCATCTACAGAGCCAGCAGGCTTCTTTGGCATGTTCTACCTGTCTCCCAGGGACCATGCTaGTGGGCAGCATTTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: PLQVIYRASRLLWHVLPVSQGPC*WAAFLP Trigger: TGGCAGAAATGCTGCCCACCAGCATGGTCCCTGGGA...GACAGGTAGAACATGCCAAAGAAGCCTGCTGGCTCTGTAGATGACCTGTAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CAA 90 bp | AGCATTAAGACCCTTACAGGTCATCTACAGAGCCAGCAGGCTTCTTaGGCATGTTCTACCTGTCCCTCTAAGGGCCCTTCTAGACTTTTT | + |
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Preference number: 2 (lower is better) Translates to: SIKTLTGHLQSQQAS*ACSTCPSKGPSRLF Trigger: AAAAAGTCTAGAAGGGCCCTTAGAGGGACAGGTAGAACATGCCAAAGAAGCCTGCTGGCTCTGTAGATGACCTGTAAGGGTCTTAATGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CAA 90 bp | ATAGACGCCATGGCCACAGCAGCTCTTATAAAGGAGAACATTTCATaGGGGCTGACTTACAGTTTCAGAGGTTTAGCCCATTACCATCAT | + |
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Preference number: 2 (lower is better) Translates to: IDAMATAALIKENIS*GLTYSFRGLAHYHH Trigger: ATGATGGTAATGGGCTAAACCTCTGAAACTGTAAGTCAGCCCCAATGAAATGTTCTCCTTTATAAGAGCTGCTGTGGCCATGGCGTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
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| 3UTR GCA 72 bp | AGCATTTCTGCCAGCCCTCAGCACAGGAGAGGGGTCTaGTTTGCTGGCAGCCACTGGGCCTGCTTTGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: SISASPQHRRGV*FAGSHWACFEG Trigger: GCCTTCAAAGCAGGCCCAGTGGCTGCCAGCAAAGCAGACCCCTCTCCTGTGCTGAGGGCTGGCAGAAATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR GCA 72 bp | GTAAGTCCCAGGGACCATGCTGGTGGGCAGCATTTCTaGCAGCCCTCAGCACAGGAGAGGGGTCTGCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: VSPRDHAGGQHF*QPSAQERGLLC Trigger: GCAAAGCAGACCCCTCTCCTGTGCTGAGGGCTGGCAGAAATGCTGCCCACCAGCATGGTCCCTGGGACTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR GCA 72 bp | GAGCTTTGGGCCTCAGCAGGTAAGTCCCAGGGACCATaGTGGTGGGCAGCATTTCTGCCAGCCCTCAGCACA | + |
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Preference number: 3 (lower is better) Translates to: ELWASAGKSQGP*WWAAFLPALST Trigger: TGTGCTGAGGGCTGGCAGAAATGCTGCCCACCAGCATGGTCCCTGGGACTTACCTGCTGAGGCCCAAAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CCA 72 bp | GAGAAAGCACTCCCAGGTTTCGAAGTGGGCCAGCGGTaGAGCAAAGCCAAGGGCCCAGCTGCCCTGAACCTT | + |
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Preference number: 3 (lower is better) Translates to: EKALPGFEVGQR*SKAKGPAALNL Trigger: AAGGTTCAGGGCAGCTGGGCCCTTGGCTTTGCTCCACCGCTGGCCCACTTCGAAACCTGGGAGTGCTTTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR TCA 72 bp | GCGGCATGCAGGCAGATGTGGTGCTGGAGAGGTAGCTaGCGGTTCTCCATCTGGATCAATGGCATCTGGCGC | + |
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Preference number: 3 (lower is better) Translates to: AACRQMWCWRGS*RFSIWINGIWR Trigger: GCGCCAGATGCCATTGATCCAGATGGAGAACCGTCAGCTACCTCTCCAGCACCACATCTGCCTGCATGCCGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
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| 3UTR GCA 72 bp | AGTGGGCCAGCGGTGGAGCAAAGCCAAGGGCCCAGCTaGCCTGAACCTTCAGCATTAAGACCCTTACAGGTC | + |
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Preference number: 3 (lower is better) Translates to: SGPAVEQSQGPS*PEPSALRPLQV Trigger: GACCTGTAAGGGTCTTAATGCTGAAGGTTCAGGGCAGCTGGGCCCTTGGCTTTGCTCCACCGCTGGCCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR TCA 72 bp | GCTTTATTGGAGGGTATGGCTCCTTCAGGCCTCCCTTaGGGAAGGGTCAGACAGTGCCCAGAGCTTTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: ALLEGMAPSGLP*GRVRQCPELWA Trigger: GGCCCAAAGCTCTGGGCACTGTCTGACCCTTCCTCAAGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR GCA 72 bp | AGGAGAGGGGTCTGCTTTGCTGGCAGCCACTGGGCCTaGTTTGAAGGCTTTCCAGGTAGGGCTGTGTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: RRGVCFAGSHWA*FEGFPGRAVFP Trigger: AGGAAACACAGCCCTACCTGGAAAGCCTTCAAAGCAGGCCCAGTGGCTGCCAGCAAAGCAGACCCCTCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CCA 72 bp | CAGAGGTTTAGCCCATTACCATCATGGTGGGAAGCATaGCGGCATGCAGGCAGATGTGGTGCTGGAGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: QRFSPLPSWWEA*RHAGRCGAGEV Trigger: TACCTCTCCAGCACCACATCTGCCTGCATGCCGCCATGCTTCCCACCATGATGGTAATGGGCTAAACCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
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| 3UTR GCA 72 bp | GCTTCCTGTCCCAGACCTTCCAGCTCAAACAGAAAGTaGTTTATTGGAGGGTATGGCTCCTTCAGGCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: ASCPRPSSSNRK*FIGGYGSFRPP Trigger: GGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGTTTGAGCTGGAAGGTCTGGGACAGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CCA 72 bp | CCCTTACAGGTCATCTACAGAGCCAGCAGGCTTCTTTaGCATGTTCTACCTGTCCCTCTAAGGGCCCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: PLQVIYRASRLL*HVLPVPLRALL Trigger: TAGAAGGGCCCTTAGAGGGACAGGTAGAACATGCCAAAGAAGCCTGCTGGCTCTGTAGATGACCTGTAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR-3UTR CAA 90 bp | AGGTGGCCCTGCCTAGGTAAGCTACAGGGCCTCCCCCAATTAATGGCTCTAACGACAGAAAGTGCTTTATaGGAGGGTATGGCTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: RWPCLGKLQGLPQLMALTTESAL*EGMAPS Trigger: TGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGT...CGTTAGAGCCATTAATTGGGGGAGGCCCTGTAGCTTACCTAGGCAGGGCCACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CCA 72 bp | TTACAGTTTCAGAGGTTTAGCCCATTACCATCATGGTaGGAAGCATGGCGGCATGCAGGCAGATGTGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: LQFQRFSPLPSW*EAWRHAGRCGA Trigger: AGCACCACATCTGCCTGCATGCCGCCATGCTTCCCACCATGATGGTAATGGGCTAAACCTCTGAAACTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
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| 3UTR CCA 72 bp | GACTTACAGTTTCAGAGGTTTAGCCCATTACCATCATaGTGGGAAGCATGGCGGCATGCAGGCAGATGTGGT | + |
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Preference number: 3 (lower is better) Translates to: DLQFQRFSPLPS*WEAWRHAGRCG Trigger: ACCACATCTGCCTGCATGCCGCCATGCTTCCCACCATGATGGTAATGGGCTAAACCTCTGAAACTGTAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
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| 3UTR CCA 72 bp | TTCCAGCTCAAACAGAAAGTGCTTTATTGGAGGGTATaGCTCCTTCAGGCCTCCCTTGAGGAAGGGTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: FQLKQKVLYWRV*LLQASLEEGSD Trigger: GTCTGACCCTTCCTCAAGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGTTTGAGCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CCA 72 bp | TCCCAGACCTTCCAGCTCAAACAGAAAGTGCTTTATTaGAGGGTATGGCTCCTTCAGGCCTCCCTTGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SQTFQLKQKVLY*RVWLLQASLEE Trigger: TTCCTCAAGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGTTTGAGCTGGAAGGTCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR GCA 72 bp | AGAAACAACATGAACCTCAACGTCAAGGCCCCGAGATaGTTCCTGTCCCAGACCTTCCAGCTCAAACAGAAA | + |
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Preference number: 3 (lower is better) Translates to: RNNMNLNVKAPR*FLSQTFQLKQK Trigger: TTTCTGTTTGAGCTGGAAGGTCTGGGACAGGAAGCATCTCGGGGCCTTGACGTTGAGGTTCATGTTGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CCA 72 bp | AAAATTCCATTCTCCCAGGCTATGTCTAAGGACAGCTaGGACACAGTGCCCCGTAAAGATATTCTAGGCATC | + |
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Preference number: 3 (lower is better) Translates to: KIPFSQAMSKDS*DTVPRKDILGI Trigger: GATGCCTAGAATATCTTTACGGGGCACTGTGTCCCAGCTGTCCTTAGACATAGCCTGGGAGAATGGAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| CDS-3UTR CCA 90 bp | GCCAGCCCTCAGCACAGGAGAGGGGTCTGCTTTGCTGGCAGCCACTGGGCCTGCCACTCCATGTCTTCCTaGGGCTCCGGCCTGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ASPQHRRGVCFAGSHWACHSMSS*GSGLCS Trigger: GCTGCACAGGCCGGAGCCCCAGGAAGACATGGAGTG...GCAGGCCCAGTGGCTGCCAGCAAAGCAGACCCCTCTCCTGTGCTGAGGGCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| CDS-3UTR CCA 90 bp | GCCAGCCCTCAGCACAGGAGAGGGGTCTGCTTTGCTGGCAGCCACTGGGCCTGCTGGTCTGTGGTAGTCTaGCCCTGGACTTCTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ASPQHRRGVCFAGSHWACWSVVV*PWTSVS Trigger: GGAGACAGAAGTCCAGGGCCAGACTACCACAGACCA...GCAGGCCCAGTGGCTGCCAGCAAAGCAGACCCCTCTCCTGTGCTGAGGGCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| CDS-3UTR GCA 90 bp | CGTCAAGGCCCCGAGATGCTTCCTGTCCCAGACCTTCCAGCTCAAACAGAAAGTCGGCTGCCCACGGTCTaGTGGACAGTCTCCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RQGPEMLPVPDLPAQTESRLPTV*WTVSSP Trigger: GGGGCTGGAGACTGTCCAGCAGACCGTGGGCAGCCG...ACTTTCTGTTTGAGCTGGAAGGTCTGGGACAGGAAGCATCTCGGGGCCTTGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| CDS-3UTR TCA 90 bp | CCAAGGTGGCCCTGCCTAGGTAAGCTACAGGGCCTCCCCCAATTAATGGCTCTAGGCTGCCCCAGCAGTTaGGCTTCCGCACGTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PRWPCLGKLQGLPQLMALGCPSS*ASARCA Trigger: TGCACAACGTGCGGAAGCTCAACTGCTGGGGCAGCC...TAGAGCCATTAATTGGGGGAGGCCCTGTAGCTTACCTAGGCAGGGCCACCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| CDS-3UTR GCA 90 bp | CCAAGGTGGCCCTGCCTAGGTAAGCTACAGGGCCTCCCCCAATTAATGGCTCTAAAAGGTGCGGGCTGGTaGCACAGCACGGGTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PRWPCLGKLQGLPQLMALKGAGW*HSTGSR Trigger: CCGAGAACCCGTGCTGTGGCACCAGCCCGCACCTTT...TAGAGCCATTAATTGGGGGAGGCCCTGTAGCTTACCTAGGCAGGGCCACCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| CDS-3UTR GCA 90 bp | AGGTGGCCCTGCCTAGGTAAGCTACAGGGCCTCCCCCAATTAATGGCTCTAACGTGCGCAGCACGGTCATaGGGTAAAGGTGCGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RWPCLGKLQGLPQLMALTCAARS*GKGAGW Trigger: CCAGCCCGCACCTTTACCGCATGACCGTGCTGCGCA...CGTTAGAGCCATTAATTGGGGGAGGCCCTGTAGCTTACCTAGGCAGGGCCACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| CDS-3UTR CCA 90 bp | GCAGCCACTGGGCCTGCTTTGAAGGCTTTCCAGGTAGGGCTGTGTTTCCTCAGGGGTAAAGGTGCGGGCTaGTGCCACAGCACGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: AATGPALKAFQVGLCFLRGKGAG*CHSTGS Trigger: AGAACCCGTGCTGTGGCACCAGCCCGCACCTTTACC...CCTGAGGAAACACAGCCCTACCTGGAAAGCCTTCAAAGCAGGCCCAGTGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| CDS-3UTR CCA 90 bp | TCATGGTGGGAAGCATGGCGGCATGCAGGCAGATGTGGTGCTGGAGAGGTAGCTTCTAGCTTCTGCAGGTaGGGCAGGTTGCGCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: SWWEAWRHAGRCGAGEVASSFCR*GRLRST Trigger: CGTGCTGCGCAACCTGCCCCACCTGCAGAAGCTAGA...AGCTACCTCTCCAGCACCACATCTGCCTGCATGCCGCCATGCTTCCCACCATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
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| CDS-3UTR CCA 90 bp | GGTGGGCAGCATTTCTGCCAGCCCTCAGCACAGGAGAGGGGTCTGCTTTGCTGGGTGGTAGTCTGGCCCTaGACTTCTGTCTCCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GGQHFCQPSAQERGLLCWVVVWP*TSVSSV Trigger: CACAGAGGAGACAGAAGTCCAGGGCCAGACTACCAC...CCAGCAAAGCAGACCCCTCTCCTGTGCTGAGGGCTGGCAGAAATGCTGCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CAA 72 bp | GAGGGGTCTGCTTTGCTGGCAGCCACTGGGCCTGCTTaGAAGGCTTTCCAGGTAGGGCTGTGTTTCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: EGSALLAATGPA*KAFQVGLCFLR Trigger: CCTGAGGAAACACAGCCCTACCTGGAAAGCCTTCAAAGCAGGCCCAGTGGCTGCCAGCAAAGCAGACCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| 3UTR CAA 72 bp | TTTCTGCCAGCCCTCAGCACAGGAGAGGGGTCTGCTTaGCTGGCAGCCACTGGGCCTGCTTTGAAGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: FLPALSTGEGSA*LAATGPALKAF Trigger: GAAAGCCTTCAAAGCAGGCCCAGTGGCTGCCAGCAAAGCAGACCCCTCTCCTGTGCTGAGGGCTGGCAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| CDS-3UTR CCA 90 bp | CCAAGGTGGCCCTGCCTAGGTAAGCTACAGGGCCTCCCCCAATTAATGGCTCTATCTAGCTTCTGCAGGTaGGGCAGGTTGCGCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: PRWPCLGKLQGLPQLMALSSFCR*GRLRST Trigger: CGTGCTGCGCAACCTGCCCCACCTGCAGAAGCTAGA...TAGAGCCATTAATTGGGGGAGGCCCTGTAGCTTACCTAGGCAGGGCCACCTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| CDS-3UTR TCA 90 bp | TTTCAGAGGTTTAGCCCATTACCATCATGGTGGGAAGCATGGCGGCATGCAGGCGGCTGCCCCAGCAGTTaGGCTTCCGCACGTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: FQRFSPLPSWWEAWRHAGGCPSS*ASARCA Trigger: TGCACAACGTGCGGAAGCTCAACTGCTGGGGCAGCC...GCCTGCATGCCGCCATGCTTCCCACCATGATGGTAATGGGCTAAACCTCTGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
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| CDS-3UTR CCA 90 bp | GAAGCATGGCGGCATGCAGGCAGATGTGGTGCTGGAGAGGTAGCTGACGGTTCTTGGTCTGTGGTAGTCTaGCCCTGGACTTCTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: EAWRHAGRCGAGEVADGSWSVVV*PWTSVS Trigger: GGAGACAGAAGTCCAGGGCCAGACTACCACAGACCA...AGAACCGTCAGCTACCTCTCCAGCACCACATCTGCCTGCATGCCGCCATGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
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| CDS-3UTR TCA 90 bp | CCAAGGTGGCCCTGCCTAGGTAAGCTACAGGGCCTCCCCCAATTAATGGCTCTACATCGTGTCCCTTGGTaGGAAGGAAGGAGACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRWPCLGKLQGLPQLMALHRVPW*EGRRLV Trigger: GACCAGTCTCCTTCCTTCTCACCAAGGGACACGATG...TAGAGCCATTAATTGGGGGAGGCCCTGTAGCTTACCTAGGCAGGGCCACCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS-3UTR CCA 90 bp | AGGTGGCCCTGCCTAGGTAAGCTACAGGGCCTCCCCCAATTAATGGCTCTAACGACAGCTCGTTCAGACTaGGGATGCGGTTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RWPCLGKLQGLPQLMALTTARSD*GCGSSS Trigger: TGAGGAGGAACCGCATCCCCAGTCTGAACGAGCTGT...CGTTAGAGCCATTAATTGGGGGAGGCCCTGTAGCTTACCTAGGCAGGGCCACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS-3UTR CCA 90 bp | CTCAAACAGAAAGTGCTTTATTGGAGGGTATGGCTCCTTCAGGCCTCCCTTGAGCTGCCCACGGTCTGCTaGACAGTCTCCAGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKQKVLYWRVWLLQASLELPTVC*TVSSPS Trigger: GGAGGGGCTGGAGACTGTCCAGCAGACCGTGGGCAG...CTCAAGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGTTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| 3UTR CAA 72 bp | TGCTTTATTGGAGGGTATGGCTCCTTCAGGCCTCCCTaGAGGAAGGGTCAGACAGTGCCCAGAGCTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFIGGYGSFRPP*RKGQTVPRALG Trigger: GCCCAAAGCTCTGGGCACTGTCTGACCCTTCCTCAAGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS-3UTR GCA 90 bp | TGCTTTGAAGGCTTTCCAGGTAGGGCTGTGTTTCCTCAGGATATAAAAGGGTCCGCAGGTGGGGCAGGTTaGGCAGCACGGTCATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFEGFPGRAVFPQDIKGSAGGAG*AARSCG Trigger: ACCGCATGACCGTGCTGCGCAACCTGCCCCACCTGC...GGACCCTTTTATATCCTGAGGAAACACAGCCCTACCTGGAAAGCCTTCAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS-3UTR CCA 90 bp | CCAAGGTGGCCCTGCCTAGGTAAGCTACAGGGCCTCCCCCAATTAATGGCTCTAGAGCACCCTGAGGTGTaGCAGGTCTTTCAGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRWPCLGKLQGLPQLMALEHPEV*QVFQVE Trigger: TTCTACCTGAAAGACCTGCCACACCTCAGGGTGCTC...TAGAGCCATTAATTGGGGGAGGCCCTGTAGCTTACCTAGGCAGGGCCACCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| 3UTR CAA 72 bp | ACCCTTACAGGTCATCTACAGAGCCAGCAGGCTTCTTaGGCATGTTCTACCTGTCCCTCTAAGGGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLTGHLQSQQAS*ACSTCPSKGPS Trigger: AGAAGGGCCCTTAGAGGGACAGGTAGAACATGCCAAAGAAGCCTGCTGGCTCTGTAGATGACCTGTAAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS-3UTR GCA 90 bp | GCCACAGCAGCTCTTATAAAGGAGAACATTTCATTGGGGCTGACTTACAGTTTCAAAGGTGCGGGCTGGTaGCACAGCACGGGTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ATAALIKENISLGLTYSFKGAGW*HSTGSR Trigger: CCGAGAACCCGTGCTGTGGCACCAGCCCGCACCTTT...GAAACTGTAAGTCAGCCCCAATGAAATGTTCTCCTTTATAAGAGCTGCTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
||
| CDS-3UTR GCA 90 bp | CATTTCATTGGGGCTGACTTACAGTTTCAGAGGTTTAGCCCATTACCATCATGGTGCGCAGCACGGTCATaGGGTAAAGGTGCGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HFIGADLQFQRFSPLPSWCAARS*GKGAGW Trigger: CCAGCCCGCACCTTTACCGCATGACCGTGCTGCGCA...CCATGATGGTAATGGGCTAAACCTCTGAAACTGTAAGTCAGCCCCAATGAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
||
| CDS-3UTR CCA 90 bp | ATAGACGCCATGGCCACAGCAGCTCTTATAAAGGAGAACATTTCATTGGGGCTGACAGCTCGTTCAGACTaGGGATGCGGTTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IDAMATAALIKENISLGLTARSD*GCGSSS Trigger: TGAGGAGGAACCGCATCCCCAGTCTGAACGAGCTGT...CAGCCCCAATGAAATGTTCTCCTTTATAAGAGCTGCTGTGGCCATGGCGTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
||
| CDS-3UTR CCA 90 bp | ACTTACAGTTTCAGAGGTTTAGCCCATTACCATCATGGTGGGAAGCATGGCGGCGAGCACCCTGAGGTGTaGCAGGTCTTTCAGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TYSFRGLAHYHHGGKHGGEHPEV*QVFQVE Trigger: TTCTACCTGAAAGACCTGCCACACCTCAGGGTGCTC...GCCGCCATGCTTCCCACCATGATGGTAATGGGCTAAACCTCTGAAACTGTAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
||
| CDS-3UTR CCA 90 bp | TCATTGGGGCTGACTTACAGTTTCAGAGGTTTAGCCCATTACCATCATGGTGGGGTGGTAGTCTGGCCCTaGACTTCTGTCTCCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLGLTYSFRGLAHYHHGGVVVWP*TSVSSV Trigger: CACAGAGGAGACAGAAGTCCAGGGCCAGACTACCAC...CCCACCATGATGGTAATGGGCTAAACCTCTGAAACTGTAAGTCAGCCCCAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCAAACAGAAAGTGCTTTATTGGAGGGTATGGCTCCTTCAGGCCTCCCTATGTTCCTATTCTTGTaGCTCCTCATCGTGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PAQTESALLEGMAPSGLPMFLFL*LLIVSL Trigger: AAGGGACACGATGAGGAGTCACAAGAATAGGAACAT...AGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGTTTGAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS-3UTR TCA 90 bp | ATTTCATTGGGGCTGACTTACAGTTTCAGAGGTTTAGCCCATTACCATCATGGTCATCGTGTCCCTTGGTaGGAAGGAAGGAGACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLGLTYSFRGLAHYHHGHRVPW*EGRRLV Trigger: GACCAGTCTCCTTCCTTCTCACCAAGGGACACGATG...ACCATGATGGTAATGGGCTAAACCTCTGAAACTGTAAGTCAGCCCCAATGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAACAGAAAGTGCTTTATTGGAGGGTATGGCTCCTTCAGGCCTCCCTTGAGGCAGCAGTAGCAATATaGCAGTCAGGATGTTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LKQKVLYWRVWLLQASLEAAVAI*QSGCSY Trigger: ATAGGAACATCCTGACTGCCATATTGCTACTGCTGC...CTCAAGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGTTTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| 3UTR CAA 72 bp | ATGGCCACAGCAGCTCTTATAAAGGAGAACATTTCATaGGGGCTGACTTACAGTTTCAGAGGTTTAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MATAALIKENIS*GLTYSFRGLAH Trigger: ATGGGCTAAACCTCTGAAACTGTAAGTCAGCCCCAATGAAATGTTCTCCTTTATAAGAGCTGCTGTGGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
||
| CDS GCA 90 bp | TGGGGCTCCGGCCTGTGCAGCGCCTGTAGCCGGCTGCCCACGGTCTaGTGGACAGTCTCCAGCCCCTCCGTATCCAGCTCCCGCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WGSGLCSACSRLPTV*WTVSSPSVSSSRSS Trigger: ACTGCTGCGGGAGCTGGATACGGAGGGGCTGGAGACTGTCCAGCAGACCGTGGGCAGCCGGCTACAGGCGCTGCACAGGCCGGAGCCCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS CCA 90 bp | GGCTCCGGCCTGTGCAGCGCCTGTAGCCGGCTGCCCACGGTCTGCTaGACAGTCTCCAGCCCCTCCGTATCCAGCTCCCGCAGCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSGLCSACSRLPTVC*TVSSPSVSSSRSSS Trigger: GCTACTGCTGCGGGAGCTGGATACGGAGGGGCTGGAGACTGTCCAGCAGACCGTGGGCAGCCGGCTACAGGCGCTGCACAGGCCGGAGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS GCA 90 bp | CCATGTCTTCCTGGGGCTCCGGCCTGTGCAGCGCCTGTAGCCGGCTaGCCACGGTCTGCTGGACAGTCTCCAGCCCCTCCGTATCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PCLPGAPACAAPVAG*PRSAGQSPAPPYPA Trigger: AGCTGGATACGGAGGGGCTGGAGACTGTCCAGCAGACCGTGGGCAGCCGGCTACAGGCGCTGCACAGGCCGGAGCCCCAGGAAGACATGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS GCA 90 bp | GGTTGTCTAGCTTCTGCAGGTGGGGCAGGTTGCGCAGCACGGTCATaGGGTAAAGGTGCGGGCTGGTGCCACAGCACGGGTTCTCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GCLASAGGAGCAARS*GKGAGWCHSTGSRP Trigger: TGGCCGAGAACCCGTGCTGTGGCACCAGCCCGCACCTTTACCGCATGACCGTGCTGCGCAACCTGCCCCACCTGCAGAAGCTAGACAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
||
| CDS TCA 90 bp | GCGGGCTGGTGCCACAGCACGGGTTCTCGGCCAGCCAGAGCACCCTaGGGTGTGGCAGGTCTTTCAGGTAGAACAGCTCGTTCAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGWCHSTGSRPARAP*GVAGLSGRTARSDW Trigger: CCAGTCTGAACGAGCTGTTCTACCTGAAAGACCTGCCACACCTCAGGGTGCTCTGGCTGGCCGAGAACCCGTGCTGTGGCACCAGCCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
||
| CDS GCA 90 bp | CCTCGGTCACAGCTTGGTTGTCTAGCTTCTGCAGGTGGGGCAGGTTaGGCAGCACGGTCATGCGGTAAAGGTGCGGGCTGGTGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRSQLGCLASAGGAG*AARSCGKGAGWCHS Trigger: GCTGTGGCACCAGCCCGCACCTTTACCGCATGACCGTGCTGCGCAACCTGCCCCACCTGCAGAAGCTAGACAACCAAGCTGTGACCGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
||
| CDS CCA 90 bp | TCTCCCTCCATCAGCGCGCGGGTCAGCTCTTCCTCGGTCACAGCTTaGTTGTCTAGCTTCTGCAGGTGGGGCAGGTTGCGCAGCACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPSISARVSSSSVTA*LSSFCRWGRLRSTV Trigger: GACCGTGCTGCGCAACCTGCCCCACCTGCAGAAGCTAGACAACCAAGCTGTGACCGAGGAAGAGCTGACCCGCGCGCTGATGGAGGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
||
| CDS CCA 90 bp | GGTGCCACAGCACGGGTTCTCGGCCAGCCAGAGCACCCTGAGGTGTaGCAGGTCTTTCAGGTAGAACAGCTCGTTCAGACTGGGGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: GATARVLGQPEHPEV*QVFQVEQLVQTGDA Trigger: CGCATCCCCAGTCTGAACGAGCTGTTCTACCTGAAAGACCTGCCACACCTCAGGGTGCTCTGGCTGGCCGAGAACCCGTGCTGTGGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGGCCCTGCCTAGGTAAGCTACAGGGCCTCCCCCAATTAATGGCTCTAACGTGGCTGCCCCAGCAGTaGAGCTTCCGCACGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RWPCLGKLQGLPQLMALTWLPQQ*SFRTLC Trigger: GCACAACGTGCGGAAGCTCAACTGCTGGGGCAGCCA...CGTTAGAGCCATTAATTGGGGGAGGCCCTGTAGCTTACCTAGGCAGGGCCACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS GCA 90 bp | ATATCTGTGAGCTGGCTGCCCCAGCAGTTGAGCTTCCGCACGTTGTaGAGCTCCGAAGCCTTGGCTCGGGACAGGACCATCTTTCGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ISVSWLPQQLSFRTL*SSEALARDRTIFRV Trigger: GACACGAAAGATGGTCCTGTCCCGAGCCAAGGCTTCGGAGCTGCACAACGTGCGGAAGCTCAACTGCTGGGGCAGCCAGCTCACAGATAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCATTACCATCATGGTGGGAAGCATGGCGGCATGCAGGCAGATGTGGTGCTTTGAGCTTCCGCACGTaGTGCAGCTCCGAAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPLPSWWEAWRHAGRCGALSFRT*CSSEAL Trigger: CAAGGCTTCGGAGCTGCACAACGTGCGGAAGCTCAA...AGCACCACATCTGCCTGCATGCCGCCATGCTTCCCACCATGATGGTAATGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
||
| CDS-3UTR CAA 90 bp | AGGGACCATGCTGGTGGGCAGCATTTCTGCCAGCCCTCAGCACAGGAGAGGGGTAGGGTGGAGACACTGTaGACACTGAGTGTGATTACC | + |
|
Preference number: 5 (lower is better) Translates to: RDHAGGQHFCQPSAQERGRVETL*TLSVIT Trigger: GGTAATCACACTCAGTGTCAACAGTGTCTCCACCCT...ACCCCTCTCCTGTGCTGAGGGCTGGCAGAAATGCTGCCCACCAGCATGGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS-3UTR CAA 90 bp | AACGTCAAGGCCCCGAGATGCTTCCTGTCCCAGACCTTCCAGCTCAAACAGAAAGGCTTGGGACAGCCATaGCCTGCACCTTCTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NVKAPRCFLSQTFQLKQKGLGQP*PAPSLC Trigger: GCACAGAGAAGGTGCAGGCAATGGCTGTCCCAAGCC...TTTCTGTTTGAGCTGGAAGGTCTGGGACAGGAAGCATCTCGGGGCCTTGACGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS-3UTR CAA 90 bp | TTTCAGAGGTTTAGCCCATTACCATCATGGTGGGAAGCATGGCGGCATGCAGGCGGCTTGGGACAGCCATaGCCTGCACCTTCTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FQRFSPLPSWWEAWRHAGGLGQP*PAPSLC Trigger: GCACAGAGAAGGTGCAGGCAATGGCTGTCCCAAGCC...GCCTGCATGCCGCCATGCTTCCCACCATGATGGTAATGGGCTAAACCTCTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
||
| CDS CCA 90 bp | CAGTCTCCAGCCCCTCCGTATCCAGCTCCCGCAGCAGTAGCAATATaGCAGTCAGGATGTTCCTATTCTTGTGACTCCTCATCGTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QSPAPPYPAPAAVAI*QSGCSYSCDSSSCP Trigger: GGGACACGATGAGGAGTCACAAGAATAGGAACATCCTGACTGCCATATTGCTACTGCTGCGGGAGCTGGATACGGAGGGGCTGGAGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS-3UTR CAA 90 bp | CTCAAACAGAAAGTGCTTTATTGGAGGGTATGGCTCCTTCAGGCCTCCCTTGAGTGCAGCTCCGAAGCCTaGGCTCGGGACAGGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: LKQKVLYWRVWLLQASLECSSEA*ARDRTI Trigger: GATGGTCCTGTCCCGAGCCAAGGCTTCGGAGCTGCA...CTCAAGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGTTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS-3UTR CAA 90 bp | TTTCAGAGGTTTAGCCCATTACCATCATGGTGGGAAGCATGGCGGCATGCAGGCTCCTCATCGTGTCCCTaGGTGAGAAGGAAGGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: FQRFSPLPSWWEAWRHAGSSSCP*VRRKET Trigger: AGTCTCCTTCCTTCTCACCAAGGGACACGATGAGGA...GCCTGCATGCCGCCATGCTTCCCACCATGATGGTAATGGGCTAAACCTCTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
||
| CDS-3UTR CAA 90 bp | GAACCTTCAGCATTAAGACCCTTACAGGTCATCTACAGAGCCAGCAGGCTTCTTTTGAGCTTCCGCACGTaGTGCAGCTCCGAAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EPSALRPLQVIYRASRLLLSFRT*CSSEAL Trigger: CAAGGCTTCGGAGCTGCACAACGTGCGGAAGCTCAA...AAGAAGCCTGCTGGCTCTGTAGATGACCTGTAAGGGTCTTAATGCTGAAGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCAAACAGAAAGTGCTTTATTGGAGGGTATGGCTCCTTCAGGCCTCCCTTCCTCATCGTGTCCCTaGGTGAGAAGGAAGGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: PAQTESALLEGMAPSGLPSSSCP*VRRKET Trigger: AGTCTCCTTCCTTCTCACCAAGGGACACGATGAGGA...AGGGAGGCCTGAAGGAGCCATACCCTCCAATAAAGCACTTTCTGTTTGAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS TCA 90 bp | TCCCGCAGCAGTAGCAATATGGCAGTCAGGATGTTCCTATTCTTGTaGCTCCTCATCGTGTCCCTTGGTGAGAAGGAAGGAGACTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSSSNMAVRMFLFL*LLIVSLGEKEGDWS Trigger: AGACCAGTCTCCTTCCTTCTCACCAAGGGACACGATGAGGAGTCACAAGAATAGGAACATCCTGACTGCCATATTGCTACTGCTGCGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS-3UTR CAA 90 bp | ATTTCATTGGGGCTGACTTACAGTTTCAGAGGTTTAGCCCATTACCATCATGGTTGCAGCTCCGAAGCCTaGGCTCGGGACAGGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: ISLGLTYSFRGLAHYHHGCSSEA*ARDRTI Trigger: GATGGTCCTGTCCCGAGCCAAGGCTTCGGAGCTGCA...ACCATGATGGTAATGGGCTAAACCTCTGAAACTGTAAGTCAGCCCCAATGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
||
| CDS-3UTR CAA 90 bp | CTTATAAAGGAGAACATTTCATTGGGGCTGACTTACAGTTTCAGAGGTTTAGCCAGGGTGGAGACACTGTaGACACTGAGTGTGATTACC | + |
|
Preference number: 5 (lower is better) Translates to: LIKENISLGLTYSFRGLARVETL*TLSVIT Trigger: GGTAATCACACTCAGTGTCAACAGTGTCTCCACCCT...GGCTAAACCTCTGAAACTGTAAGTCAGCCCCAATGAAATGTTCTCCTTTATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
||
| CDS GCA 72 bp | CCTGGGGCTCCGGCCTGTGCAGCGCCTGTAGCCGGCTaGCCACGGTCTGCTGGACAGTCTCCAGCCCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PGAPACAAPVAG*PRSAGQSPAPP Trigger: CGGAGGGGCTGGAGACTGTCCAGCAGACCGTGGGCAGCCGGCTACAGGCGCTGCACAGGCCGGAGCCCCAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS CCA 72 bp | CTGTGCAGCGCCTGTAGCCGGCTGCCCACGGTCTGCTaGACAGTCTCCAGCCCCTCCGTATCCAGCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LCSACSRLPTVC*TVSSPSVSSSR Trigger: GCGGGAGCTGGATACGGAGGGGCTGGAGACTGTCCAGCAGACCGTGGGCAGCCGGCTACAGGCGCTGCACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
||
| CDS GCA 72 bp | TGCGCAGCACGGTCATGCGGTAAAGGTGCGGGCTGGTaGCACAGCACGGGTTCTCGGCCAGCCAGAGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: CAARSCGKGAGW*HSTGSRPARAP Trigger: GGGTGCTCTGGCTGGCCGAGAACCCGTGCTGTGGCACCAGCCCGCACCTTTACCGCATGACCGTGCTGCGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
||
| CDS GCA 72 bp | GCTTCTGCAGGTGGGGCAGGTTGCGCAGCACGGTCATaGGGTAAAGGTGCGGGCTGGTGCCACAGCACGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASAGGAGCAARS*GKGAGWCHSTG Trigger: ACCCGTGCTGTGGCACCAGCCCGCACCTTTACCGCATGACCGTGCTGCGCAACCTGCCCCACCTGCAGAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
||
| CDS CCA 72 bp | GGTTGCGCAGCACGGTCATGCGGTAAAGGTGCGGGCTaGTGCCACAGCACGGGTTCTCGGCCAGCCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GCAARSCGKGAG*CHSTGSRPARA Trigger: TGCTCTGGCTGGCCGAGAACCCGTGCTGTGGCACCAGCCCGCACCTTTACCGCATGACCGTGCTGCGCAACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
||
| CDS GCA 72 bp | TGCGGTTCCTCCTCAGGTACAGCTCGCTCAGGCGCCTaGAGCTGCGCACCGGTTCCAGGGTGGAGACACTGT | + |
|
Preference number: 6 (lower is better) Translates to: CGSSSGTARSGA*SCAPVPGWRHC Trigger: ACAGTGTCTCCACCCTGGAACCGGTGCGCAGCTGCAGGCGCCTGAGCGAGCTGTACCTGAGGAGGAACCGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
||
| CDS CAA 72 bp | GTGAGCTGGCTGCCCCAGCAGTTGAGCTTCCGCACGTaGTGCAGCTCCGAAGCCTTGGCTCGGGACAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: VSWLPQQLSFRT*CSSEALARDRT Trigger: GGTCCTGTCCCGAGCCAAGGCTTCGGAGCTGCACAACGTGCGGAAGCTCAACTGCTGGGGCAGCCAGCTCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
||
| CDS GCA 72 bp | AGCTGGCTGCCCCAGCAGTTGAGCTTCCGCACGTTGTaGAGCTCCGAAGCCTTGGCTCGGGACAGGACCATC | + |
|
Preference number: 6 (lower is better) Translates to: SWLPQQLSFRTL*SSEALARDRTI Trigger: GATGGTCCTGTCCCGAGCCAAGGCTTCGGAGCTGCACAACGTGCGGAAGCTCAACTGCTGGGGCAGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
||
| CDS GCA 72 bp | GGGGGCTTGGGACAGCCATTGCCTGCACCTTCTCTGTaGGGGGCGGCAGTGATCTCATCTCCCTCCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: GGLGQPLPAPSL*GAAVISSPSIS Trigger: GCTGATGGAGGGAGATGAGATCACTGCCGCCCCGCACAGAGAAGGTGCAGGCAATGGCTGTCCCAAGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
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| CDS CAA 90 bp | CCCTCCATCAGCGCGCGGGTCAGCTCTTCCTCGGTCACAGCTTGGTaGTCTAGCTTCTGCAGGTGGGGCAGGTTGCGCAGCACGGTCATG | + |
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Preference number: 6 (lower is better) Translates to: PSISARVSSSSVTAW*SSFCRWGRLRSTVM Trigger: CATGACCGTGCTGCGCAACCTGCCCCACCTGCAGAAGCTAGACAACCAAGCTGTGACCGAGGAAGAGCTGACCCGCGCGCTGATGGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
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| CDS GCA 72 bp | CAGCTTGGTTGTCTAGCTTCTGCAGGTGGGGCAGGTTaGGCAGCACGGTCATGCGGTAAAGGTGCGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QLGCLASAGGAG*AARSCGKGAGW Trigger: CCAGCCCGCACCTTTACCGCATGACCGTGCTGCGCAACCTGCCCCACCTGCAGAAGCTAGACAACCAAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
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| CDS TCA 72 bp | TGCCACAGCACGGGTTCTCGGCCAGCCAGAGCACCCTaGGGTGTGGCAGGTCTTTCAGGTAGAACAGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: CHSTGSRPARAP*GVAGLSGRTAR Trigger: ACGAGCTGTTCTACCTGAAAGACCTGCCACACCTCAGGGTGCTCTGGCTGGCCGAGAACCCGTGCTGTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
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| CDS GCA 72 bp | GGTCTTTCAGGTAGAACAGCTCGTTCAGACTGGGGATaGGGTTCCTCCTCAGGTACAGCTCGCTCAGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: GLSGRTARSDWG*GSSSGTARSGA Trigger: GGCGCCTGAGCGAGCTGTACCTGAGGAGGAACCGCATCCCCAGTCTGAACGAGCTGTTCTACCTGAAAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
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| CDS CAA 90 bp | ATCTCCCGGCATATGGAAATATCTGTGAGCTGGCTGCCCCAGCAGTaGAGCTTCCGCACGTTGTGCAGCTCCGAAGCCTTGGCTCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: ISRHMEISVSWLPQQ*SFRTLCSSEALARD Trigger: GTCCCGAGCCAAGGCTTCGGAGCTGCACAACGTGCGGAAGCTCAACTGCTGGGGCAGCCAGCTCACAGATATTTCCATATGCCGGGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
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| CDS CAA 90 bp | GAAATATCTGTGAGCTGGCTGCCCCAGCAGTTGAGCTTCCGCACGTaGTGCAGCTCCGAAGCCTTGGCTCGGGACAGGACCATCTTTCGT | + |
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Preference number: 6 (lower is better) Translates to: EISVSWLPQQLSFRT*CSSEALARDRTIFR Trigger: ACGAAAGATGGTCCTGTCCCGAGCCAAGGCTTCGGAGCTGCACAACGTGCGGAAGCTCAACTGCTGGGGCAGCCAGCTCACAGATATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
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| CDS CCA 72 bp | CTGGGCATCTCCCGGCATATGGAAATATCTGTGAGCTaGCTGCCCCAGCAGTTGAGCTTCCGCACGTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: LGISRHMEISVS*LPQQLSFRTLC Trigger: GCACAACGTGCGGAAGCTCAACTGCTGGGGCAGCCAGCTCACAGATATTTCCATATGCCGGGAGATGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
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| CDS CAA 72 bp | CAGTTGAGCTTCCGCACGTTGTGCAGCTCCGAAGCCTaGGCTCGGGACAGGACCATCTTTCGTGTCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QLSFRTLCSSEA*ARDRTIFRVSF Trigger: GAAGCTGACACGAAAGATGGTCCTGTCCCGAGCCAAGGCTTCGGAGCTGCACAACGTGCGGAAGCTCAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
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| CDS CCA 72 bp | GTGGCAGGTCTTTCAGGTAGAACAGCTCGTTCAGACTaGGGATGCGGTTCCTCCTCAGGTACAGCTCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: VAGLSGRTARSD*GCGSSSGTARS Trigger: TGAGCGAGCTGTACCTGAGGAGGAACCGCATCCCCAGTCTGAACGAGCTGTTCTACCTGAAAGACCTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
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| CDS CCA 72 bp | CTCCTCATCGTGTCCCTTGGTGAGAAGGAAGGAGACTaGTCTGTGGTAGTCTGGCCCTGGACTTCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLIVSLGEKEGD*SVVVWPWTSVS Trigger: GGAGACAGAAGTCCAGGGCCAGACTACCACAGACCAGTCTCCTTCCTTCTCACCAAGGGACACGATGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
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| CDS CAA 72 bp | CATATGGAAATATCTGTGAGCTGGCTGCCCCAGCAGTaGAGCTTCCGCACGTTGTGCAGCTCCGAAGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: HMEISVSWLPQQ*SFRTLCSSEAL Trigger: CAAGGCTTCGGAGCTGCACAACGTGCGGAAGCTCAACTGCTGGGGCAGCCAGCTCACAGATATTTCCATATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105397.10 ENSMUST00000105398.2 |
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| CDS TCA 72 bp | CTCCCTATTCTTGTGACTCCTCATCGTGTCCCTTGGTaGGAAGGAAGGAGACTGGTCTGTGGTAGTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LPILVTPHRVPW*EGRRLVCGSLA Trigger: GGCCAGACTACCACAGACCAGTCTCCTTCCTTCTCACCAAGGGACACGATGAGGAGTCACAAGAATAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105398.2 |
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| CDS CCA 72 bp | GCCCCTCCGTATCCAGCTCCCGCAGCAGTAGCAATATaGCAGTCAGGATGTTCCTATTCTTGTGACTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: APPYPAPAAVAI*QSGCSYSCDSS Trigger: TGAGGAGTCACAAGAATAGGAACATCCTGACTGCCATATTGCTACTGCTGCGGGAGCTGGATACGGAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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| CDS TCA 72 bp | GTTCCTATTCTTGTGACTCCTCATCGTGTCCCTTGGTaGGAAGGAAGGAGACTGGTCTGTGGTAGTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VPILVTPHRVPW*EGRRLVCGSLA Trigger: GGCCAGACTACCACAGACCAGTCTCCTTCCTTCTCACCAAGGGACACGATGAGGAGTCACAAGAATAGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105397.10 |
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