Pregenerated sensors for CFAP206 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028294Ensembl transcript IDs: ENSMUST00000029971.12, ENSMUST00000108136.8, ENSMUST00000137514.3, ENSMUST00000162495.8
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTGGCGAGCTCAGCCTGAGGGAAAACGCTCTGCAGAGCGGCTGTTaGCTCTCTGACAATCTTGATGTCTGTGGGGGATCCAAGCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: RGELSLRENALQSGC*LSDNLDVCGGSKPR Trigger: TCTGGGCTTGGATCCCCCACAGACATCAAGATTGTCAGAGAGGCAACAGCCGCTCTGCAGAGCGTTTTCCCTCAGGCTGAGCTCGCCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162495.8 |
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| 3UTR TCA 90 bp | TCTTTGTCCTTCTTACTGAGGGTCAGAAACGTGGCGAGCTCAGCCTaGGGGAAAACGCTCTGCAGAGCGGCTGTTGCCTCTCTGACAATC | + |
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Preference number: 1 (lower is better) Translates to: SLSFLLRVRNVASSA*GKTLCRAAVASLTI Trigger: GATTGTCAGAGAGGCAACAGCCGCTCTGCAGAGCGTTTTCCCTCAGGCTGAGCTCGCCACGTTTCTGACCCTCAGTAAGAAGGACAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162495.8 |
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| 3UTR CCA 90 bp | TTAAATAAGCGAATTCCGGTAACAATCATGGTGAGCTCTTTCAACTaGCGCTCTTTGTCCTTCTTACTGAGGGTCAGAAACGTGGCGAGC | + |
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Preference number: 1 (lower is better) Translates to: LNKRIPVTIMVSSFN*RSLSFLLRVRNVAS Trigger: GCTCGCCACGTTTCTGACCCTCAGTAAGAAGGACAAAGAGCGCCAGTTGAAAGAGCTCACCATGATTGTTACCGGAATTCGCTTATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162495.8 |
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| 3UTR TCA 72 bp | TTCTTACTGAGGGTCAGAAACGTGGCGAGCTCAGCCTaGGGGAAAACGCTCTGCAGAGCGGCTGTTGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: FLLRVRNVASSA*GKTLCRAAVAS Trigger: AGAGGCAACAGCCGCTCTGCAGAGCGTTTTCCCTCAGGCTGAGCTCGCCACGTTTCTGACCCTCAGTAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162495.8 |
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| 3UTR TCA 72 bp | TGGGGGATCCAAGCCCAGAGCGCAGGAGCACGTAGCTaGCGATCTTTCTGTAGAGATTTTCCAGCTCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: WGIQAQSAGARS*RSFCRDFPALP Trigger: GGGAAGAGCTGGAAAATCTCTACAGAAAGATCGTCAGCTACGTGCTCCTGCGCTCTGGGCTTGGATCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162495.8 |
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| 3UTR CCA 72 bp | CGAATTCCGGTAACAATCATGGTGAGCTCTTTCAACTaGCGCTCTTTGTCCTTCTTACTGAGGGTCAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: RIPVTIMVSSFN*RSLSFLLRVRN Trigger: GTTTCTGACCCTCAGTAAGAAGGACAAAGAGCGCCAGTTGAAAGAGCTCACCATGATTGTTACCGGAATTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162495.8 |
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| 3UTR GCA 72 bp | CTTTCTGTAGAGATTTTCCAGCTCTTCCCTAGCACTTaGTCTGTTGTCTGTGATTTCTCTGCTAACAATGCC | + |
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Preference number: 3 (lower is better) Translates to: LSVEIFQLFPST*SVVCDFSANNA Trigger: GGCATTGTTAGCAGAGAAATCACAGACAACAGAGCAAGTGCTAGGGAAGAGCTGGAAAATCTCTACAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162495.8 |
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| 3UTR CAA 72 bp | ACGCTCTGCAGAGCGGCTGTTGCCTCTCTGACAATCTaGATGTCTGTGGGGGATCCAAGCCCAGAGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TLCRAAVASLTI*MSVGDPSPERR Trigger: CCTGCGCTCTGGGCTTGGATCCCCCACAGACATCAAGATTGTCAGAGAGGCAACAGCCGCTCTGCAGAGCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162495.8 |
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| CDS-3UTR GCA 90 bp | AGTCAGGCAGGATACGGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCAGAGGAGCTCGTGGGTaGCCAGGAAGAGCTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SQAGYGALVHSHTTSDCARGARG*PGRAPG Trigger: ACCTGGAGCTCTTCCTGGGCACCCACGAGCTCCTCT...GGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACCGTATCCTGCCTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CCA 90 bp | GGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGAAGATGGGGAAGACTTaGGATGTTGGGACCGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: GALVHSHTTSDCASPANEKMGKT*DVGTAV Trigger: GACGGCGGTCCCAACATCCCAAGTCTTCCCCATCTT...CTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR TCA 90 bp | AGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACACGCACACACGAAGGCCAGCTATaGAAATCTGGGGCCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SHTTSDCASPANELYTRTHEGQL*KSGAWA Trigger: TGCCCAGGCCCCAGATTTTCATAGCTGGCCTTCGTG...TGTGCGTGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR GCA 90 bp | GATGTCTGTGGGGGATCCAAGCCCAGAGCGCAGGAGCACGTAGCTGACGATCTTGATCTCTCCGTGGGCTaGACATTCTTGTCCTATTTC | + |
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Preference number: 4 (lower is better) Translates to: DVCGGSKPRAQEHVADDLDLSVG*TFLSYF Trigger: GAAATAGGACAAGAATGTGCAGCCCACGGAGAGATC...AAGATCGTCAGCTACGTGCTCCTGCGCTCTGGGCTTGGATCCCCCACAGACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162495.8 |
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| CDS-3UTR CCA 90 bp | GTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACACCAGCTATGAAAATCTaGGGCCTGGGCACTCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VHSHTTSDCASPANELYTPAMKI*GLGTRL Trigger: CAGCCGAGTGCCCAGGCCCCAGATTTTCATAGCTGG...TGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR TCA 90 bp | ACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACACGCATGGTCCTGGGCAATCTaGAGCTGGGAGTCTATGTGC | + |
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Preference number: 4 (lower is better) Translates to: TVTQPVTVPAPQMSFIHAWSWAI*SWESMC Trigger: GCACATAGACTCCCAGCTTCAGATTGCCCAGGACCA...TGCGTGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR TCA 90 bp | GGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCAAAGGGTACACCTGTaGGGTGTTATCTCTTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: GALVHSHTTSDCASPANEQRVHL*GVISSH Trigger: ATGAGAAGAGATAACACCTCACAGGTGTACCCTTTG...CTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR GCA 90 bp | AGTCAGGCAGGATACGGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCCCGGCAAATCATCAATaGCTTCTCCTCCTTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SQAGYGALVHSHTTSDCAPANHQ*LLLLFH Trigger: GTGGAAAAGGAGGAGAAGGCATTGATGATTTGCCGG...GGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACCGTATCCTGCCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CCA 90 bp | GGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCAAAATTCCAATGGCTaGATTTCCTGGGAGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GALVHSHTTSDCASPANEQNSNG*ISWEEK Trigger: CTTCTCCTCCCAGGAAATCCAGCCATTGGAATTTTG...CTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR GCA 90 bp | ACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACACGCAAGCTGGGAGTCTATGTaGTGTGTGGTGGTTGGGATC | + |
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Preference number: 4 (lower is better) Translates to: TVTQPVTVPAPQMSFIHASWESM*CVVVGI Trigger: GATCCCAACCACCACACAGCACATAGACTCCCAGCT...TGCGTGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CCA 90 bp | GTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACAGAAGCGATCTCTCCGTaGGCTGCACATTCTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VHSHTTSDCASPANELYTEAISP*AAHSCP Trigger: AGGACAAGAATGTGCAGCCCACGGAGAGATCGCTTC...TGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR TCA 90 bp | GTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACAGCCATTCCTGTGTTCTaGAATCTGCCAACTCCACTC | + |
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Preference number: 4 (lower is better) Translates to: VHSHTTSDCASPANELYTAIPVF*NLPTPL Trigger: GAGTGGAGTTGGCAGATTTCAGAACACAGGAATGGC...TGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR TCA 90 bp | GGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGTCTGAGAATAGGGTATaGGAGTTTCAAACTGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: GALVHSHTTSDCASPANESENRV*EFQTAD Trigger: ATCAGCAGTTTGAAACTCTCATACCCTATTCTCAGA...CTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CCA 90 bp | AGCTTTATACACGCACAGCACTTTAAACCCTCCATCCGTGCCACTAAGGAGCAGAGAACCGTCTCGTCCTaGAAGCTCATCCACAGACTC | + |
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Preference number: 4 (lower is better) Translates to: SFIHAQHFKPSIRATKEQRTVSS*KLIHRL Trigger: GAGTCTGTGGATGAGCTTCCAGGACGAGACGGTTCT...CTGCTCCTTAGTGGCACGGATGGAGGGTTTAAAGTGCTGTGCGTGTATAAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR TCA 90 bp | GTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACATCAGTCTGGACGGAGTaGGTAATTTTCTGGCGCAAA | + |
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Preference number: 4 (lower is better) Translates to: VHSHTTSDCASPANELYTSVWTE*VIFWRK Trigger: TTTGCGCCAGAAAATTACTCACTCCGTCCAGACTGA...TGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR GCA 90 bp | AGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACACGCACAGATCTCTCCGTGGGCTaGACATTCTTGTCCTATTTC | + |
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Preference number: 4 (lower is better) Translates to: SHTTSDCASPANELYTRTDLSVG*TFLSYF Trigger: GAAATAGGACAAGAATGTGCAGCCCACGGAGAGATC...TGTGCGTGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CCA 90 bp | AGCTTTATACACGCACAGCACTTTAAACCCTCCATCCGTGCCACTAAGGAGCAGTTTCGTCCACCGCTCTaGTTAAGTTCACCTTCACCC | + |
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Preference number: 4 (lower is better) Translates to: SFIHAQHFKPSIRATKEQFRPPL*LSSPSP Trigger: GGGTGAAGGTGAACTTAACCAGAGCGGTGGACGAAA...CTGCTCCTTAGTGGCACGGATGGAGGGTTTAAAGTGCTGTGCGTGTATAAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| 3UTR CAA 72 bp | GTAACAATCATGGTGAGCTCTTTCAACTGGCGCTCTTaGTCCTTCTTACTGAGGGTCAGAAACGTGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: VTIMVSSFNWRS*SFLLRVRNVAS Trigger: GCTCGCCACGTTTCTGACCCTCAGTAAGAAGGACAAAGAGCGCCAGTTGAAAGAGCTCACCATGATTGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162495.8 |
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| CDS-3UTR CCA 90 bp | GTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACAGTGAGCTCTTTCAACTaGCGCTCTTTGTCCTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: VHSHTTSDCASPANELYTVSSFN*RSLSFL Trigger: TAAGAAGGACAAAGAGCGCCAGTTGAAAGAGCTCAC...TGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CCA 90 bp | AGTCAGGCAGGATACGGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCATGGATGTAATGGTCTaGATTTTCTGCGAATGTGTA | + |
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Preference number: 4 (lower is better) Translates to: SQAGYGALVHSHTTSDCAMDVMV*IFCECV Trigger: TACACATTCGCAGAAAATCCAGACCATTACATCCAT...GGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACCGTATCCTGCCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR GCA 90 bp | AGCTTTATACACGCACAGCACTTTAAACCCTCCATCCGTGCCACTAAGGAGCAGTTCTGCGAATGTGTATaGAGCATCTCTGGTACTGAA | + |
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Preference number: 4 (lower is better) Translates to: SFIHAQHFKPSIRATKEQFCECV*SISGTE Trigger: TTCAGTACCAGAGATGCTGCATACACATTCGCAGAA...CTGCTCCTTAGTGGCACGGATGGAGGGTTTAAAGTGCTGTGCGTGTATAAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR GCA 90 bp | AGCTTTATACACGCACAGCACTTTAAACCCTCCATCCGTGCCACTAAGGAGCAGATGGTCTGGATTTTCTaGGAATGTGTATGCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: SFIHAQHFKPSIRATKEQMVWIF*ECVCSI Trigger: GATGCTGCATACACATTCGCAGAAAATCCAGACCAT...CTGCTCCTTAGTGGCACGGATGGAGGGTTTAAAGTGCTGTGCGTGTATAAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CCA 90 bp | CCTTTTCCACAGTCTCTGTTAAATAAGCGAATTCCGGTAACAATCATGGTGAGCGAAGCGATCTCTCCGTaGGCTGCACATTCTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PFPQSLLNKRIPVTIMVSEAISP*AAHSCP Trigger: AGGACAAGAATGTGCAGCCCACGGAGAGATCGCTTC...GCTCACCATGATTGTTACCGGAATTCGCTTATTTAACAGAGACTGTGGAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162495.8 |
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| CDS-3UTR CCA 90 bp | ACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACACGCAGTTTGCTGTTGTTTCTaGAAAAAGCCATTCCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: TVTQPVTVPAPQMSFIHAVCCCF*KKPFLC Trigger: ACACAGGAATGGCTTTTTCCAGAAACAACAGCAAAC...TGCGTGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CCA 90 bp | AGCTTTATACACGCACAGCACTTTAAACCCTCCATCCGTGCCACTAAGGAGCAGATGTTCTCATGGTCGTaGGTGGCAATATGTGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: SFIHAQHFKPSIRATKEQMFSWS*VAICVY Trigger: ATACACACATATTGCCACCCACGACCATGAGAACAT...CTGCTCCTTAGTGGCACGGATGGAGGGTTTAAAGTGCTGTGCGTGTATAAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CCA 90 bp | AGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACACGCACATTCAGTTGTTCCAGTTaGGCTGCTAATTGTTTTATC | + |
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Preference number: 4 (lower is better) Translates to: SHTTSDCASPANELYTRTFSCSS*AANCFI Trigger: GATAAAACAATTAGCAGCCCAACTGGAACAACTGAA...TGTGCGTGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CAA 90 bp | GGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGGAAGATGGGGAAGACTaGGGATGTTGGGACCGCCGT | + |
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Preference number: 5 (lower is better) Translates to: GALVHSHTTSDCASPANEEDGED*GCWDRR Trigger: ACGGCGGTCCCAACATCCCAAGTCTTCCCCATCTTC...CTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CAA 90 bp | GGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTGCTGCCTTCTCTCTaGGACTGGGTGCTAGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: GALVHSHTTSDCASPANELLPSL*DWVLAS Trigger: AGAGGCTAGCACCCAGTCCAAGAGAGAAGGCAGCAG...CTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CAA 90 bp | AGTCAGGCAGGATACGGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCTGTGCTGTGTGGTGGTaGGGATCGCTTCGTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: SQAGYGALVHSHTTSDCACAVWW*GSLRGE Trigger: TTCTCCACGAAGCGATCCCAACCACCACACAGCACA...GGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACCGTATCCTGCCTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS CCA 90 bp | CCTGGTCCTGGGCAATCTGAAGCTGGGAGTCTATGTGCTGTGTGGTaGTTGGGATCGCTTCGTGGAGAATGGCCGGCAAATCATCAATGC | + |
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Preference number: 5 (lower is better) Translates to: PGPGQSEAGSLCAVW*LGSLRGEWPANHQC Trigger: GCATTGATGATTTGCCGGCCATTCTCCACGAAGCGATCCCAACCACCACACAGCACATAGACTCCCAGCTTCAGATTGCCCAGGACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CCA 90 bp | CCATCGAGAAGCCCTAGCATCACTTTCTCGGGAAAGAGGAGCTCGTaGGTGCCCAGGAAGAGCTCCAGGTTGGTGGTCAAGTTACTGAGA | + |
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Preference number: 5 (lower is better) Translates to: PSRSPSITFSGKRSS*VPRKSSRLVVKLLR Trigger: TCTCAGTAACTTGACCACCAACCTGGAGCTCTTCCTGGGCACCCACGAGCTCCTCTTTCCCGAGAAAGTGATGCTAGGGCTTCTCGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS-3UTR CAA 90 bp | GGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGGCCATGAGGGGGTTGTaGGTTACTTTCTCAAGGATG | + |
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Preference number: 5 (lower is better) Translates to: GALVHSHTTSDCASPANEAMRGL*VTFSRM Trigger: CATCCTTGAGAAAGTAACCAACAACCCCCTCATGGC...CTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CAA 90 bp | GGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGAGGAAGAGCTCCAGGTaGGTGGTCAAGTTACTGAGA | + |
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Preference number: 5 (lower is better) Translates to: GALVHSHTTSDCASPANERKSSR*VVKLLR Trigger: TCTCAGTAACTTGACCACCAACCTGGAGCTCTTCCT...CTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS CCA 90 bp | GTCCTGGGCAATCTGAAGCTGGGAGTCTATGTGCTGTGTGGTGGTTaGGATCGCTTCGTGGAGAATGGCCGGCAAATCATCAATGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: VLGNLKLGVYVLCGG*DRFVENGRQIINAF Trigger: GAAGGCATTGATGATTTGCCGGCCATTCTCCACGAAGCGATCCCAACCACCACACAGCACATAGACTCCCAGCTTCAGATTGCCCAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS-3UTR CAA 90 bp | AGTCAGGCAGGATACGGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCTTGGCCATGAGGGGGTaGTTGGTTACTTTCTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: SQAGYGALVHSHTTSDCALAMRG*LVTFSR Trigger: CCTTGAGAAAGTAACCAACAACCCCCTCATGGCCAA...GGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACCGTATCCTGCCTGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CAA 90 bp | AGTCAGGCAGGATACGGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCTCCATGTTAAAGCCATaGCTGGGATCTAGGACGACA | + |
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Preference number: 5 (lower is better) Translates to: SQAGYGALVHSHTTSDCASMLKP*LGSRTT Trigger: TGTCGTCCTAGATCCCAGCAATGGCTTTAACATGGA...GGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACCGTATCCTGCCTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CAA 90 bp | AGTCAGGCAGGATACGGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCCTAGCACTTGCTCTGTaGTCTGTGATTTCTCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: SQAGYGALVHSHTTSDCALALAL*SVISLL Trigger: TAGCAGAGAAATCACAGACAACAGAGCAAGTGCTAG...GGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACCGTATCCTGCCTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CAA 90 bp | AGTCAGGCAGGATACGGTGCCCTAGTGCACAGTCACACAACCAGTGACTGTGCCTCATACTGCCGAACATaGTACAGTGCTTCCTTTAAC | + |
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Preference number: 5 (lower is better) Translates to: SQAGYGALVHSHTTSDCASYCRT*YSASFN Trigger: GTTAAAGGAAGCACTGTACAATGTTCGGCAGTATGA...GGCACAGTCACTGGTTGTGTGACTGTGCACTAGGGCACCGTATCCTGCCTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS TCA 90 bp | TTCTCTCTTGGACTGGGTGCTAGCCTCTTTCAAAGGGTACACCTGTaGGGTGTTATCTCTTCTCATGTGGCTAAGGTCAGTCTGGACGGA | + |
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Preference number: 5 (lower is better) Translates to: FSLGLGASLFQRVHL*GVISSHVAKVSLDG Trigger: TCCGTCCAGACTGACCTTAGCCACATGAGAAGAGATAACACCTCACAGGTGTACCCTTTGAAAGAGGCTAGCACCCAGTCCAAGAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CAA 90 bp | GTGCACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACAGTGGGCTGCACATTCTaGTCCTATTTCTCGTATGAT | + |
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Preference number: 5 (lower is better) Translates to: VHSHTTSDCASPANELYTVGCTF*SYFSYD Trigger: ATCATACGAGAAATAGGACAAGAATGTGCAGCCCAC...TGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CAA 90 bp | AGCTTTATACACGCACAGCACTTTAAACCCTCCATCCGTGCCACTAAGGAGCAGAGGGATGGATTTTTATaGTCCAGTAGCCGTGCCACA | + |
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Preference number: 5 (lower is better) Translates to: SFIHAQHFKPSIRATKEQRDGFL*SSSRAT Trigger: TGTGGCACGGCTACTGGACAATAAAAATCCATCCCT...CTGCTCCTTAGTGGCACGGATGGAGGGTTTAAAGTGCTGTGCGTGTATAAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS CCA 90 bp | TTCTTCTTAGTTCCCATTCGTTCCACTCATATGTTCTCATGGTCGTaGGTGGCAATATGTGTGTATCTGTCTGTGTGCCGTTGTCACACT | + |
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Preference number: 5 (lower is better) Translates to: FFLVPIRSTHMFSWS*VAICVYLSVCRCHT Trigger: AGTGTGACAACGGCACACAGACAGATACACACATATTGCCACCCACGACCATGAGAACATATGAGTGGAACGAATGGGAACTAAGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS CCA 90 bp | TGGCTTTTCTTCTTAGTTCCCATTCGTTCCACTCATATGTTCTCATaGTCGTGGGTGGCAATATGTGTGTATCTGTCTGTGTGCCGTTGT | + |
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Preference number: 5 (lower is better) Translates to: WLFFLVPIRSTHMFS*SWVAICVYLSVCRC Trigger: ACAACGGCACACAGACAGATACACACATATTGCCACCCACGACCATGAGAACATATGAGTGGAACGAATGGGAACTAAGAAGAAAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS-3UTR CAA 90 bp | ACAGTCACACAACCAGTGACTGTGCCAGCCCCGCAAATGAGCTTTATACACGCAAACTCTGCATTCTTCTaGGCTTTCTCCTTAATCAAA | + |
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Preference number: 5 (lower is better) Translates to: TVTQPVTVPAPQMSFIHANSAFF*AFSLIK Trigger: TTTGATTAAGGAGAAAGCCAAGAAGAATGCAGAGTT...TGCGTGTATAAAGCTCATTTGCGGGGCTGGCACAGTCACTGGTTGTGTGACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS GCA 90 bp | TTTTTATTGTCCAGTAGCCGTGCCACACAAAGCTTAACAAGTTTCTaGACGTCAGTCTTGATGAGGGTCCTATCCATGTTAAAGCCATTG | + |
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Preference number: 5 (lower is better) Translates to: FLLSSSRATQSLTSF*TSVLMRVLSMLKPL Trigger: CAATGGCTTTAACATGGATAGGACCCTCATCAAGACTGACGTGCAGAAACTTGTTAAGCTTTGTGTGGCACGGCTACTGGACAATAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 ENSMUST00000137514.3 |
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| CDS-3UTR CAA 90 bp | CCACAGTCTCTGTTAAATAAGCGAATTCCGGTAACAATCATGGTGAGCTCTTTCGTGGGCTGCACATTCTaGTCCTATTTCTCGTATGAT | + |
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Preference number: 5 (lower is better) Translates to: PQSLLNKRIPVTIMVSSFVGCTF*SYFSYD Trigger: ATCATACGAGAAATAGGACAAGAATGTGCAGCCCAC...GAAAGAGCTCACCATGATTGTTACCGGAATTCGCTTATTTAACAGAGACTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162495.8 |
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| CDS GCA 90 bp | CAAGTAATTATATCTGACAAAACAGTCTGCAGGAAGATCTCATACTaGCGAACATTGTACAGTGCTTCCTTTAACATATACGGCTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: QVIISDKTVCRKISY*RTLYSASFNIYGWS Trigger: ACTCCAGCCGTATATGTTAAAGGAAGCACTGTACAATGTTCGGCAGTATGAGATCTTCCTGCAGACTGTTTTGTCAGATATAATTACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS GCA 90 bp | ATCTCTACTTCCTCAGCACAAGTAATTATATCTGACAAAACAGTCTaGAGGAAGATCTCATACTGCCGAACATTGTACAGTGCTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: ISTSSAQVIISDKTV*RKISYCRTLYSASF Trigger: AAAGGAAGCACTGTACAATGTTCGGCAGTATGAGATCTTCCTGCAGACTGTTTTGTCAGATATAATTACTTGTGCTGAGGAAGTAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CCA 90 bp | TGCATTCTTCTTGGCTTTCTCCTTAATCAAATGGATGTAATGGTCTaGATTTTCTGCGAATGTGTATGCAGCATCTCTGGTACTGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: CILLGFLLNQMDVMV*IFCECVCSISGTES Trigger: ACTTTCAGTACCAGAGATGCTGCATACACATTCGCAGAAAATCCAGACCATTACATCCATTTGATTAAGGAGAAAGCCAAGAAGAATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CCA 90 bp | CAATATGTGTGTATCTGTCTGTGTGCCGTTGTCACACTTTGTAATTaGCTTTATATAATGCTTGTCAACATCTCTCATCTGAGAATAGGG | + |
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Preference number: 5 (lower is better) Translates to: QYVCICLCAVVTLCN*LYIMLVNISHLRIG Trigger: CCCTATTCTCAGATGAGAGATGTTGACAAGCATTATATAAAGCCAATTACAAAGTGTGACAACGGCACACAGACAGATACACACATATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS TCA 90 bp | TTGTTTTATCATCATCTCTACTTCCTCAGCACAAGTAATTATATCTaGCAAAACAGTCTGCAGGAAGATCTCATACTGCCGAACATTGTA | + |
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Preference number: 5 (lower is better) Translates to: LFYHHLYFLSTSNYI*QNSLQEDLILPNIV Trigger: TACAATGTTCGGCAGTATGAGATCTTCCTGCAGACTGTTTTGTCAGATATAATTACTTGTGCTGAGGAAGTAGAGATGATGATAAAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CCA 72 bp | AGCCCTAGCATCACTTTCTCGGGAAAGAGGAGCTCGTaGGTGCCCAGGAAGAGCTCCAGGTTGGTGGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SPSITFSGKRSS*VPRKSSRLVVK Trigger: CTTGACCACCAACCTGGAGCTCTTCCTGGGCACCCACGAGCTCCTCTTTCCCGAGAAAGTGATGCTAGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CAA 90 bp | TTCTCGGGAAAGAGGAGCTCGTGGGTGCCCAGGAAGAGCTCCAGGTaGGTGGTCAAGTTACTGAGAACGCTGATCAGAACCGTCTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: FSGKRSSWVPRKSSR*VVKLLRTLIRTVSS Trigger: GGACGAGACGGTTCTGATCAGCGTTCTCAGTAACTTGACCACCAACCTGGAGCTCTTCCTGGGCACCCACGAGCTCCTCTTTCCCGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CCA 72 bp | CACAGACTCGCCAGCGCAACGAAGATGGGGAAGACTTaGGATGTTGGGACCGCCGTCTTAGATTTTACTGCC | + |
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Preference number: 6 (lower is better) Translates to: HRLASATKMGKT*DVGTAVLDFTA Trigger: GGCAGTAAAATCTAAGACGGCGGTCCCAACATCCCAAGTCTTCCCCATCTTCGTTGCGCTGGCGAGTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CAA 72 bp | CCACAGACTCGCCAGCGCAACGAAGATGGGGAAGACTaGGGATGTTGGGACCGCCGTCTTAGATTTTACTGC | + |
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Preference number: 6 (lower is better) Translates to: PQTRQRNEDGED*GCWDRRLRFYC Trigger: GCAGTAAAATCTAAGACGGCGGTCCCAACATCCCAAGTCTTCCCCATCTTCGTTGCGCTGGCGAGTCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CAA 72 bp | AAGAGGAGCTCGTGGGTGCCCAGGAAGAGCTCCAGGTaGGTGGTCAAGTTACTGAGAACGCTGATCAGAACC | + |
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Preference number: 6 (lower is better) Translates to: KRSSWVPRKSSR*VVKLLRTLIRT Trigger: GGTTCTGATCAGCGTTCTCAGTAACTTGACCACCAACCTGGAGCTCTTCCTGGGCACCCACGAGCTCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CAA 90 bp | GGTCCTGGGCAATCTGAAGCTGGGAGTCTATGTGCTGTGTGGTGGTaGGGATCGCTTCGTGGAGAATGGCCGGCAAATCATCAATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: GPGQSEAGSLCAVWW*GSLRGEWPANHQCL Trigger: AAGGCATTGATGATTTGCCGGCCATTCTCCACGAAGCGATCCCAACCACCACACAGCACATAGACTCCCAGCTTCAGATTGCCCAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS TCA 72 bp | GACGACAGCTTTCACCATAAAAGCAACCACCGTCTCTaGAGCGATCTCTCCGTGGGCTGCACATTCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: DDSFHHKSNHRL*SDLSVGCTFLS Trigger: GGACAAGAATGTGCAGCCCACGGAGAGATCGCTTCAGAGACGGTGGTTGCTTTTATGGTGAAAGCTGTCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 ENSMUST00000137514.3 |
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| CDS CCA 72 bp | TGTGCTGTGTGGTGGTTGGGATCGCTTCGTGGAGAATaGCCGGCAAATCATCAATGCCTTCTCCTCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: CAVWWLGSLRGE*PANHQCLLLLF Trigger: GAAAAGGAGGAGAAGGCATTGATGATTTGCCGGCCATTCTCCACGAAGCGATCCCAACCACCACACAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CCA 72 bp | GAGTCTATGTGCTGTGTGGTGGTTGGGATCGCTTCGTaGAGAATGGCCGGCAAATCATCAATGCCTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ESMCCVVVGIAS*RMAGKSSMPSP Trigger: AGGAGAAGGCATTGATGATTTGCCGGCCATTCTCCACGAAGCGATCCCAACCACCACACAGCACATAGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CAA 72 bp | CAATCTGAAGCTGGGAGTCTATGTGCTGTGTGGTGGTaGGGATCGCTTCGTGGAGAATGGCCGGCAAATCAT | + |
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Preference number: 6 (lower is better) Translates to: QSEAGSLCAVWW*GSLRGEWPANH Trigger: ATGATTTGCCGGCCATTCTCCACGAAGCGATCCCAACCACCACACAGCACATAGACTCCCAGCTTCAGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS TCA 72 bp | GGACTGGGTGCTAGCCTCTTTCAAAGGGTACACCTGTaGGGTGTTATCTCTTCTCATGTGGCTAAGGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: GLGASLFQRVHL*GVISSHVAKVS Trigger: ACTGACCTTAGCCACATGAGAAGAGATAACACCTCACAGGTGTACCCTTTGAAAGAGGCTAGCACCCAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS CCA 72 bp | GTTCCCATTCGTTCCACTCATATGTTCTCATGGTCGTaGGTGGCAATATGTGTGTATCTGTCTGTGTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: VPIRSTHMFSWS*VAICVYLSVCR Trigger: ACGGCACACAGACAGATACACACATATTGCCACCCACGACCATGAGAACATATGAGTGGAACGAATGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS CAA 90 bp | TTCTGCACGTCAGTCTTGATGAGGGTCCTATCCATGTTAAAGCCATaGCTGGGATCTAGGACGACAGCTTTCACCATAAAAGCAACCACC | + |
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Preference number: 6 (lower is better) Translates to: FCTSVLMRVLSMLKP*LGSRTTAFTIKATT Trigger: GGTGGTTGCTTTTATGGTGAAAGCTGTCGTCCTAGATCCCAGCAATGGCTTTAACATGGATAGGACCCTCATCAAGACTGACGTGCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 ENSMUST00000137514.3 |
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| CDS CAA 90 bp | AGTAGCCGTGCCACACAAAGCTTAACAAGTTTCTGCACGTCAGTCTaGATGAGGGTCCTATCCATGTTAAAGCCATTGCTGGGATCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SSRATQSLTSFCTSV*MRVLSMLKPLLGSR Trigger: CCTAGATCCCAGCAATGGCTTTAACATGGATAGGACCCTCATCAAGACTGACGTGCAGAAACTTGTTAAGCTTTGTGTGGCACGGCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 ENSMUST00000137514.3 |
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| CDS GCA 72 bp | TCCAGTAGCCGTGCCACACAAAGCTTAACAAGTTTCTaGACGTCAGTCTTGATGAGGGTCCTATCCATGTTA | + |
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Preference number: 6 (lower is better) Translates to: SSSRATQSLTSF*TSVLMRVLSML Trigger: TAACATGGATAGGACCCTCATCAAGACTGACGTGCAGAAACTTGTTAAGCTTTGTGTGGCACGGCTACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 ENSMUST00000137514.3 |
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| CDS CCA 72 bp | CGAACATTGTACAGTGCTTCCTTTAACATATACGGCTaGAGTTCTTTGGCCATGAGGGGGTTGTTGGTTACT | + |
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Preference number: 6 (lower is better) Translates to: RTLYSASFNIYG*SSLAMRGLLVT Trigger: AGTAACCAACAACCCCCTCATGGCCAAAGAACTCCAGCCGTATATGTTAAAGGAAGCACTGTACAATGTTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CAA 72 bp | GCCACACAAAGCTTAACAAGTTTCTGCACGTCAGTCTaGATGAGGGTCCTATCCATGTTAAAGCCATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: ATQSLTSFCTSV*MRVLSMLKPLL Trigger: CAGCAATGGCTTTAACATGGATAGGACCCTCATCAAGACTGACGTGCAGAAACTTGTTAAGCTTTGTGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 ENSMUST00000137514.3 |
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| CDS TCA 72 bp | CTCCGTGGGCTGCACATTCTTGTCCTATTTCTCGTATaGTATTCTTTATCACACTTTCTGCTTGAGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LRGLHILVLFLV*YSLSHFLLEWE Trigger: CTCCCACTCAAGCAGAAAGTGTGATAAAGAATATCATACGAGAAATAGGACAAGAATGTGCAGCCCACGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 ENSMUST00000137514.3 ENSMUST00000162495.8 |
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| CDS CCA 72 bp | TTCTTAGTTCCCATTCGTTCCACTCATATGTTCTCATaGTCGTGGGTGGCAATATGTGTGTATCTGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: FLVPIRSTHMFS*SWVAICVYLSV Trigger: CACAGACAGATACACACATATTGCCACCCACGACCATGAGAACATATGAGTGGAACGAATGGGAACTAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029971.12 |
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| CDS CAA 72 bp | TCAGTCTTGATGAGGGTCCTATCCATGTTAAAGCCATaGCTGGGATCTAGGACGACAGCTTTCACCATAAAA | + |
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Preference number: 6 (lower is better) Translates to: SVLMRVLSMLKP*LGSRTTAFTIK Trigger: TTTTATGGTGAAAGCTGTCGTCCTAGATCCCAGCAATGGCTTTAACATGGATAGGACCCTCATCAAGACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 ENSMUST00000137514.3 |
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| CDS CAA 72 bp | ACCTGCATCTTAATGGTGTCCAGGGATGGATTTTTATaGTCCAGTAGCCGTGCCACACAAAGCTTAACAAGT | + |
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Preference number: 6 (lower is better) Translates to: TCILMVSRDGFL*SSSRATQSLTS Trigger: ACTTGTTAAGCTTTGTGTGGCACGGCTACTGGACAATAAAAATCCATCCCTGGACACCATTAAGATGCAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 ENSMUST00000137514.3 |
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| CDS CAA 90 bp | ATATCTGACAAAACAGTCTGCAGGAAGATCTCATACTGCCGAACATaGTACAGTGCTTCCTTTAACATATACGGCTGGAGTTCTTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: ISDKTVCRKISYCRT*YSASFNIYGWSSLA Trigger: GGCCAAAGAACTCCAGCCGTATATGTTAAAGGAAGCACTGTACAATGTTCGGCAGTATGAGATCTTCCTGCAGACTGTTTTGTCAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CAA 72 bp | AAAACAGTCTGCAGGAAGATCTCATACTGCCGAACATaGTACAGTGCTTCCTTTAACATATACGGCTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: KTVCRKISYCRT*YSASFNIYGWS Trigger: ACTCCAGCCGTATATGTTAAAGGAAGCACTGTACAATGTTCGGCAGTATGAGATCTTCCTGCAGACTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS TCA 72 bp | CATCATCTCTACTTCCTCAGCACAAGTAATTATATCTaGCAAAACAGTCTGCAGGAAGATCTCATACTGCCG | + |
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Preference number: 6 (lower is better) Translates to: HHLYFLSTSNYI*QNSLQEDLILP Trigger: CGGCAGTATGAGATCTTCCTGCAGACTGTTTTGTCAGATATAATTACTTGTGCTGAGGAAGTAGAGATGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS CCA 72 bp | CTTGGCTTTCTCCTTAATCAAATGGATGTAATGGTCTaGATTTTCTGCGAATGTGTATGCAGCATCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LGFLLNQMDVMV*IFCECVCSISG Trigger: ACCAGAGATGCTGCATACACATTCGCAGAAAATCCAGACCATTACATCCATTTGATTAAGGAGAAAGCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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| CDS GCA 72 bp | ATATCTGACAAAACAGTCTGCAGGAAGATCTCATACTaGCGAACATTGTACAGTGCTTCCTTTAACATATAC | + |
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Preference number: 6 (lower is better) Translates to: ISDKTVCRKISY*RTLYSASFNIY Trigger: GTATATGTTAAAGGAAGCACTGTACAATGTTCGGCAGTATGAGATCTTCCTGCAGACTGTTTTGTCAGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029971.12 ENSMUST00000108136.8 |
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