Pregenerated sensors for CETN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045031Ensembl transcript IDs: ENSMUST00000071400.13, ENSMUST00000075537.7, ENSMUST00000102955.11, ENSMUST00000125252.3, ENSMUST00000140956.8
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCTACATAGAAGCTCACAAACCTTCTATGATTCCAAAGCCCTCTaGCCTCTGTGGTCTCCAGGCACTCAAGTGGCCCAGAGACACAGA | + |
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Preference number: 1 (lower is better) Translates to: HLHRSSQTFYDSKAL*PLWSPGTQVAQRHR Trigger: TCTGTGTCTCTGGGCCACTTGAGTGCCTGGAGACCACAGAGGCCAGAGGGCTTTGGAATCATAGAAGGTTTGTGAGCTTCTATGTAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR CAA 90 bp | CTTACTGTGAGCGCCCATGACAGAATGCAAGAGTACAAGCCATTTTaGCCCTTCCAGGGGTCGATTCCCAGCACCTACATAGAAGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LTVSAHDRMQEYKPF*PFQGSIPSTYIEAH Trigger: GTGAGCTTCTATGTAGGTGCTGGGAATCGACCCCTGGAAGGGCAAAAATGGCTTGTACTCTTGCATTCTGTCATGGGCGCTCACAGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR-3UTR CCA 90 bp | TCATGGAAGTCTATGATAAAAGCATTCATCTGTGAAGGCCTTACTGTGAGCGCCGCCCTCTGGCCTCTGTaGTCTCCAGGCACTCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: SWKSMIKAFICEGLTVSAALWPL*SPGTQV Trigger: CACTTGAGTGCCTGGAGACCACAGAGGCCAGAGGGC...GGCGCTCACAGTAAGGCCTTCACAGATGAATGCTTTTATCATAGACTTCCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR-3UTR CCA 90 bp | ACAGAATGCAAGAGTACAAGCCATTTTTGCCCTTCCAGGGGTCGATTCCCAGCAAATTTCATCTGGATCTaGGGGCCAAGTTTATTCAAC | + |
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Preference number: 2 (lower is better) Translates to: TECKSTSHFCPSRGRFPANFIWI*GPSLFN Trigger: GTTGAATAAACTTGGCCCCCAGATCCAGATGAAATT...TGCTGGGAATCGACCCCTGGAAGGGCAAAAATGGCTTGTACTCTTGCATTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR-3UTR CCA 90 bp | GGTACACACATTTATAATCTAATGTCCAGAAGGAAGATGCAGGAGGAGATTATTGATTCCAAAGCCCTCTaGCCTCTGTGGTCTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GTHIYNLMSRRKMQEEIIDSKAL*PLWSPG Trigger: GCCTGGAGACCACAGAGGCCAGAGGGCTTTGGAATC...AATAATCTCCTCCTGCATCTTCCTTCTGGACATTAGATTATAAATGTGTGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGGCCCAGAGACACAGATGCAAGCAAAACACCCATACATGTAATAATACAGGGACATATAACTTCTaGCACAGATTAGACACCAAG | + |
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Preference number: 2 (lower is better) Translates to: QVAQRHRCKQNTHTCNNTGTYNF*HRLDTK Trigger: CTTGGTGTCTAATCTGTGCCAGAAGTTATATGTCCC...TGTATTATTACATGTATGGGTGTTTTGCTTGCATCTGTGTCTCTGGGCCACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR CCA 72 bp | AAGCCCTCTGGCCTCTGTGGTCTCCAGGCACTCAAGTaGCCCAGAGACACAGATGCAAGCAAAACACCCATA | + |
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Preference number: 3 (lower is better) Translates to: KPSGLCGLQALK*PRDTDASKTPI Trigger: TATGGGTGTTTTGCTTGCATCTGTGTCTCTGGGCCACTTGAGTGCCTGGAGACCACAGAGGCCAGAGGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR CCA 72 bp | CAAACCTTCTATGATTCCAAAGCCCTCTGGCCTCTGTaGTCTCCAGGCACTCAAGTGGCCCAGAGACACAGA | + |
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Preference number: 3 (lower is better) Translates to: QTFYDSKALWPL*SPGTQVAQRHR Trigger: TCTGTGTCTCTGGGCCACTTGAGTGCCTGGAGACCACAGAGGCCAGAGGGCTTTGGAATCATAGAAGGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR CCA 72 bp | AGAAGCTCACAAACCTTCTATGATTCCAAAGCCCTCTaGCCTCTGTGGTCTCCAGGCACTCAAGTGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: RSSQTFYDSKAL*PLWSPGTQVAQ Trigger: CTGGGCCACTTGAGTGCCTGGAGACCACAGAGGCCAGAGGGCTTTGGAATCATAGAAGGTTTGTGAGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR TCA 72 bp | ACTATAGCATGCATGTGGAGATCAGAGGACAAGTTGTaGGAACCAGTTCTCACCTTCCACCATGTAGGACCA | + |
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Preference number: 3 (lower is better) Translates to: TIACMWRSEDKL*EPVLTFHHVGP Trigger: TGGTCCTACATGGTGGAAGGTGAGAACTGGTTCTCACAACTTGTCCTCTGATCTCCACATGCATGCTATAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR-3UTR CAA 90 bp | ACAGAATGCAAGAGTACAAGCCATTTTTGCCCTTCCAGGGGTCGATTCCCAGCATCAGGTATTACATCATaGAACTGCTTAACAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: TECKSTSHFCPSRGRFPASGITS*NCLTGK Trigger: CTTTCCTGTTAAGCAGTTCAATGATGTAATACCTGA...TGCTGGGAATCGACCCCTGGAAGGGCAAAAATGGCTTGTACTCTTGCATTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR-3UTR CAA 90 bp | ACCTCCTGGTATGTGTCCTTCAGTTTTGTTCTCATAGCACAATATAACAAGCTGGAACTTACTACTGTGTaGCCTGACCCAGGGAGTGAA | + |
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Preference number: 3 (lower is better) Translates to: TSWYVSFSFVLIAQYNKLELTTV*PDPGSE Trigger: TTCACTCCCTGGGTCAGGCAACACAGTAGTAAGTTC...CAGCTTGTTATATTGTGCTATGAGAACAAAACTGAAGGACACATACCAGGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR GCA 72 bp | TGGTCTCCAGGCACTCAAGTGGCCCAGAGACACAGATaGAAGCAAAACACCCATACATGTAATAATACATTT | + |
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Preference number: 3 (lower is better) Translates to: WSPGTQVAQRHR*KQNTHTCNNTF Trigger: AAATGTATTATTACATGTATGGGTGTTTTGCTTGCATCTGTGTCTCTGGGCCACTTGAGTGCCTGGAGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR-3UTR CAA 90 bp | AAGTGGCCCAGAGACACAGATGCAAGCAAAACACCCATACATGTAATAATACATTATGGAAATACTGTTTaGGGGCTCACAGTTCAAATA | + |
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Preference number: 3 (lower is better) Translates to: KWPRDTDASKTPIHVIIHYGNTV*GLTVQI Trigger: TATTTGAACTGTGAGCCCCAAAACAGTATTTCCATA...ATGTATTATTACATGTATGGGTGTTTTGCTTGCATCTGTGTCTCTGGGCCACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR-3UTR CAA 90 bp | TTTCTTACTACTACAGATTTAATGACATTGGTAGGGACATATAACTTCTGGCACTCAGGTATTACATCATaGAACTGCTTAACAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: FLTTTDLMTLVGTYNFWHSGITS*NCLTGK Trigger: CTTTCCTGTTAAGCAGTTCAATGATGTAATACCTGA...GTGCCAGAAGTTATATGTCCCTACCAATGTCATTAAATCTGTAGTAGTAAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071400.13 ENSMUST00000075537.7 ENSMUST00000102955.11 ENSMUST00000140956.8 |
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| 3UTR CAA 72 bp | AGCGCCCATGACAGAATGCAAGAGTACAAGCCATTTTaGCCCTTCCAGGGGTCGATTCCCAGCACCTACATA | + |
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Preference number: 4 (lower is better) Translates to: SAHDRMQEYKPF*PFQGSIPSTYI Trigger: TATGTAGGTGCTGGGAATCGACCCCTGGAAGGGCAAAAATGGCTTGTACTCTTGCATTCTGTCATGGGCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| CDS-3UTR TCA 90 bp | TGGTCTCCAGGCACTCAAGTGGCCCAGAGACACAGATGCAAGCAAAACACCCATCCTTGGCAACCCTCTTaGTGTTATTTAGTGATATGC | + |
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Preference number: 4 (lower is better) Translates to: WSPGTQVAQRHRCKQNTHPWQPS*CYLVIC Trigger: GCATATCACTAAATAACATCAAGAGGGTTGCCAAGG...ATGGGTGTTTTGCTTGCATCTGTGTCTCTGGGCCACTTGAGTGCCTGGAGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| CDS-3UTR GCA 90 bp | CTCTTAAAGAACTTACTACTGTGTTGCCTGACCCAGGGAGTGAAAGCCCAGCAGGCCTCTTTAATTTCTTaGTTCTGGGTGTCATTCAGT | + |
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Preference number: 4 (lower is better) Translates to: LLKNLLLCCLTQGVKAQQASLIS*FWVSFS Trigger: ACTGAATGACACCCAGAAGCAAGAAATTAAAGAGGC...CTGCTGGGCTTTCACTCCCTGGGTCAGGCAACACAGTAGTAAGTTCTTTAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| 3UTR CAA 72 bp | TTAATGGCCTTACCTCTTAAAGAACTTACTACTGTGTaGCCTGACCCAGGGAGTGAAAGCCCAGCAGTAACT | + |
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Preference number: 4 (lower is better) Translates to: LMALPLKELTTV*PDPGSESPAVT Trigger: AGTTACTGCTGGGCTTTCACTCCCTGGGTCAGGCAACACAGTAGTAAGTTCTTTAAGAGGTAAGGCCATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| CDS-3UTR GCA 90 bp | CTTAACAGGAAAGCTGTTAACAGGAGGTCCAAACCTCTTGGAAGGCACCAAGCAGCCTCTTTAATTTCTTaGTTCTGGGTGTCATTCAGT | + |
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Preference number: 4 (lower is better) Translates to: LNRKAVNRRSKPLGRHQAASLIS*FWVSFS Trigger: ACTGAATGACACCCAGAAGCAAGAAATTAAAGAGGC...TGCTTGGTGCCTTCCAAGAGGTTTGGACCTCCTGTTAACAGCTTTCCTGTTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071400.13 ENSMUST00000075537.7 ENSMUST00000102955.11 |
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| CDS-3UTR CCA 90 bp | CTTAACAGGAAAGCTGTTAACAGGAGGTCCAAACCTCTTGGAAGGCACCAAGCAAATCTTCAAAACAAATaGTGCCAGTCCCTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LNRKAVNRRSKPLGRHQANLQNK*CQSLPC Trigger: ACAAGGAAGGGACTGGCACCATTTGTTTTGAAGATT...TGCTTGGTGCCTTCCAAGAGGTTTGGACCTCCTGTTAACAGCTTTCCTGTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075537.7 ENSMUST00000102955.11 ENSMUST00000140956.8 |
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| CDS-3UTR TCA 90 bp | GTGGAAATGGATACACTCAGGTATTACATCATTGAACTGCTTAACAGGAAAGCTCCTTGGCAACCCTCTTaGTGTTATTTAGTGATATGC | + |
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Preference number: 4 (lower is better) Translates to: VEMDTLRYYIIELLNRKAPWQPS*CYLVIC Trigger: GCATATCACTAAATAACATCAAGAGGGTTGCCAAGG...AGCTTTCCTGTTAAGCAGTTCAATGATGTAATACCTGAGTGTATCCATTTCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071400.13 ENSMUST00000102955.11 ENSMUST00000140956.8 |
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| CDS-3UTR GCA 90 bp | AACGTGGAAATGGATACACTCAGGTATTACATCATTGAACTGCTTAACAGGAAACTTCAAAACAAATGGTaGCAGTCCCTTCCTTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: NVEMDTLRYYIIELLNRKLQNKW*QSLPCR Trigger: TCGACAAGGAAGGGACTGGCACCATTTGTTTTGAAG...TTTCCTGTTAAGCAGTTCAATGATGTAATACCTGAGTGTATCCATTTCCACGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075537.7 ENSMUST00000102955.11 ENSMUST00000140956.8 |
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| CDS-3UTR TCA 90 bp | ATGGATACACTCAGGTATTACATCATTGAACTGCTTAACAGGAAAGCTGTTAACCCTTGGCAACCCTCTTaGTGTTATTTAGTGATATGC | + |
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Preference number: 4 (lower is better) Translates to: MDTLRYYIIELLNRKAVNPWQPS*CYLVIC Trigger: GCATATCACTAAATAACATCAAGAGGGTTGCCAAGG...GTTAACAGCTTTCCTGTTAAGCAGTTCAATGATGTAATACCTGAGTGTATCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071400.13 ENSMUST00000102955.11 ENSMUST00000140956.8 |
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| CDS-3UTR GCA 90 bp | AAACTAAACGTGGAAATGGATACACTCAGGTATTACATCATTGAACTGCTTAACCTTCAAAACAAATGGTaGCAGTCCCTTCCTTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: KLNVEMDTLRYYIIELLNLQNKW*QSLPCR Trigger: TCGACAAGGAAGGGACTGGCACCATTTGTTTTGAAG...GTTAAGCAGTTCAATGATGTAATACCTGAGTGTATCCATTTCCACGTTTAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075537.7 ENSMUST00000102955.11 ENSMUST00000140956.8 |
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| CDS-3UTR GCA 90 bp | AACGTGGAAATGGATACACTCAGGTATTACATCATTGAACTGCTTAACAGGAAAGCCTCTTTAATTTCTTaGTTCTGGGTGTCATTCAGT | + |
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Preference number: 4 (lower is better) Translates to: NVEMDTLRYYIIELLNRKASLIS*FWVSFS Trigger: ACTGAATGACACCCAGAAGCAAGAAATTAAAGAGGC...TTTCCTGTTAAGCAGTTCAATGATGTAATACCTGAGTGTATCCATTTCCACGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071400.13 ENSMUST00000075537.7 ENSMUST00000102955.11 |
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| CDS-3UTR CCA 90 bp | ACCTCCTGGTATGTGTCCTTCAGTTTTGTTCTCATAGCACAATATAACAAGCTGGTTCTTTCAGATCTATaGTTCCAGATCCATCAATAT | + |
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Preference number: 4 (lower is better) Translates to: TSWYVSFSFVLIAQYNKLVLSDL*FQIHQY Trigger: ATATTGATGGATCTGGAACCATAGATCTGAAAGAAC...CAGCTTGTTATATTGTGCTATGAGAACAAAACTGAAGGACACATACCAGGAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| CDS-3UTR CCA 90 bp | CACTCAGGTATTACATCATTGAACTGCTTAACAGGAAAGCTGTTAACAGGAGGTGTTCTTTCAGATCTATaGTTCCAGATCCATCAATAT | + |
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Preference number: 4 (lower is better) Translates to: HSGITSLNCLTGKLLTGGVLSDL*FQIHQY Trigger: ATATTGATGGATCTGGAACCATAGATCTGAAAGAAC...ACCTCCTGTTAACAGCTTTCCTGTTAAGCAGTTCAATGATGTAATACCTGAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071400.13 ENSMUST00000075537.7 ENSMUST00000102955.11 |
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| CDS-3UTR CCA 90 bp | AACGTGGAAATGGATACACTCAGGTATTACATCATTGAACTGCTTAACAGGAAAAATCTTCAAAACAAATaGTGCCAGTCCCTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: NVEMDTLRYYIIELLNRKNLQNK*CQSLPC Trigger: ACAAGGAAGGGACTGGCACCATTTGTTTTGAAGATT...TTTCCTGTTAAGCAGTTCAATGATGTAATACCTGAGTGTATCCATTTCCACGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075537.7 ENSMUST00000102955.11 ENSMUST00000140956.8 |
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| CDS-3UTR CCA 90 bp | GTGGAAATGGATACACTCAGGTATTACATCATTGAACTGCTTAACAGGAAAGCTGTTCTTTCAGATCTATaGTTCCAGATCCATCAATAT | + |
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Preference number: 4 (lower is better) Translates to: VEMDTLRYYIIELLNRKAVLSDL*FQIHQY Trigger: ATATTGATGGATCTGGAACCATAGATCTGAAAGAAC...AGCTTTCCTGTTAAGCAGTTCAATGATGTAATACCTGAGTGTATCCATTTCCAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071400.13 ENSMUST00000075537.7 ENSMUST00000102955.11 |
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| CDS-3UTR CAA 90 bp | GTGATCCTAACCTCCTGGTATGTGTCCTTCAGTTTTGTTCTCATAGCACAATATGGCCTCTTTAATTTCTaGCTTCTGGGTGTCATTCAG | + |
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Preference number: 5 (lower is better) Translates to: VILTSWYVSFSFVLIAQYGLFNF*LLGVIQ Trigger: CTGAATGACACCCAGAAGCAAGAAATTAAAGAGGCC...ATATTGTGCTATGAGAACAAAACTGAAGGACACATACCAGGAGGTTAGGATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071400.13 |
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| CDS-3UTR CAA 90 bp | ATGGATACACTCAGGTATTACATCATTGAACTGCTTAACAGGAAAGCTGTTAACAGCCTAAGGCCCTCATaGCAATCTTCAGTTCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: MDTLRYYIIELLNRKAVNSLRPS*QSSVLS Trigger: TGAAAGAACTGAAGATTGCAATGAGGGCCTTAGGCT...GTTAACAGCTTTCCTGTTAAGCAGTTCAATGATGTAATACCTGAGTGTATCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075537.7 ENSMUST00000102955.11 |
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| CDS-3UTR CAA 90 bp | TTTCTTACTACTACAGATTTAATGACATTGGTAGGGACATATAACTTCTGGCACGGCCTCTTTAATTTCTaGCTTCTGGGTGTCATTCAG | + |
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Preference number: 5 (lower is better) Translates to: FLTTTDLMTLVGTYNFWHGLFNF*LLGVIQ Trigger: CTGAATGACACCCAGAAGCAAGAAATTAAAGAGGCC...GTGCCAGAAGTTATATGTCCCTACCAATGTCATTAAATCTGTAGTAGTAAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071400.13 ENSMUST00000075537.7 ENSMUST00000102955.11 |
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| CDS-3UTR CAA 90 bp | TTTCTTACTACTACAGATTTAATGACATTGGTAGGGACATATAACTTCTGGCACAGCCTAAGGCCCTCATaGCAATCTTCAGTTCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: FLTTTDLMTLVGTYNFWHSLRPS*QSSVLS Trigger: TGAAAGAACTGAAGATTGCAATGAGGGCCTTAGGCT...GTGCCAGAAGTTATATGTCCCTACCAATGTCATTAAATCTGTAGTAGTAAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075537.7 ENSMUST00000102955.11 |
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| CDS CAA 72 bp | TCGGTTAAGTTTTCCCCTAGCTCCTTGGCAACCCTCTaGATGTTATTTAGTGATATGCTTCCCGTAGCATCG | + |
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Preference number: 6 (lower is better) Translates to: SVKFSPSSLATL*MLFSDMLPVAS Trigger: CGATGCTACGGGAAGCATATCACTAAATAACATCAAGAGGGTTGCCAAGGAGCTAGGGGAAAACTTAACCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071400.13 ENSMUST00000102955.11 ENSMUST00000125252.3 ENSMUST00000140956.8 |
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| CDS CAA 90 bp | AATTCATCTTCGGTTAAGTTTTCCCCTAGCTCCTTGGCAACCCTCTaGATGTTATTTAGTGATATGCTTCCCGTAGCATCGTCATCAAAT | + |
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Preference number: 6 (lower is better) Translates to: NSSSVKFSPSSLATL*MLFSDMLPVASSSN Trigger: ATTTGATGACGATGCTACGGGAAGCATATCACTAAATAACATCAAGAGGGTTGCCAAGGAGCTAGGGGAAAACTTAACCGAAGATGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071400.13 ENSMUST00000102955.11 ENSMUST00000125252.3 ENSMUST00000140956.8 |
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| CDS CAA 72 bp | TGTAATTCATCTTCGGTTAAGTTTTCCCCTAGCTCCTaGGCAACCCTCTTGATGTTATTTAGTGATATGCTT | + |
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Preference number: 6 (lower is better) Translates to: CNSSSVKFSPSS*ATLLMLFSDML Trigger: AAGCATATCACTAAATAACATCAAGAGGGTTGCCAAGGAGCTAGGGGAAAACTTAACCGAAGATGAATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071400.13 ENSMUST00000102955.11 ENSMUST00000125252.3 ENSMUST00000140956.8 |
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