RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CETN3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021537

Ensembl transcript IDs: ENSMUST00000022009.10, ENSMUST00000224168.2, ENSMUST00000224433.2, ENSMUST00000224705.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAGACAGATTGGTCTATAAAACGCCCAGCGATACTCTGACAGAATaGACTTCTCTTAGGACTCATGACCCTGAGCAACTAAAGCATCAC +
Preference number: 1 (lower is better)
Translates to: SDRLVYKTPSDTLTE*TSLRTHDPEQLKHH
Trigger: GTGATGCTTTAGTTGCTCAGGGTCATGAGTCCTAAGAGAAGTGCATTCTGTCAGAGTATCGCTGGGCGTTTTATAGACCAATCTGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224433.2
3UTR CAA 90 bp AGTATCCAGTCTGTCACTGCACGCGCTATCAGTACTTCAGACAGATaGGTCTATAAAACGCCCAGCGATACTCTGACAGAATGCACTTCT +
Preference number: 2 (lower is better)
Translates to: SIQSVTARAISTSDR*VYKTPSDTLTECTS
Trigger: AGAAGTGCATTCTGTCAGAGTATCGCTGGGCGTTTTATAGACCAATCTGTCTGAAGTACTGATAGCGCGTGCAGTGACAGACTGGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224433.2
3UTR-3UTR GCA 90 bp TGTGGATCTCTCTCTAGTATCCAGTCTGTCACTGCACGCGCTATCAGTACTTCAGATACTCTGACAGAATaGACTTCTCTTAGGACTCAT +
Preference number: 2 (lower is better)
Translates to: CGSLSSIQSVTARAISTSDTLTE*TSLRTH
Trigger: ATGAGTCCTAAGAGAAGTGCATTCTGTCAGAGTATC...TGAAGTACTGATAGCGCGTGCAGTGACAGACTGGATACTAGAGAGAGATCCACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224433.2
3UTR-3UTR CCA 90 bp CATCTATTCAGGAGGCTAAGACAAAGGATCTTAAGTACCAGGTCAAACTTGAAAAAGGAAAAGTGGGGGTaGGGAGAACTTGCTGGGAGT +
Preference number: 2 (lower is better)
Translates to: HLFRRLRQRILSTRSNLKKEKWG*GELAGS
Trigger: ACTCCCAGCAAGTTCTCCCCACCCCCACTTTTCCTT...TTTCAAGTTTGACCTGGTACTTAAGATCCTTTGTCTTAGCCTCCTGAATAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000224705.2
3UTR GCA 72 bp TTGGTCTATAAAACGCCCAGCGATACTCTGACAGAATaGACTTCTCTTAGGACTCATGACCCTGAGCAACTA +
Preference number: 3 (lower is better)
Translates to: LVYKTPSDTLTE*TSLRTHDPEQL
Trigger: TAGTTGCTCAGGGTCATGAGTCCTAAGAGAAGTGCATTCTGTCAGAGTATCGCTGGGCGTTTTATAGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224433.2
3UTR TCA 72 bp TCATTAAGTTGTCTTAAGGGTCTGCTTCAATACAAATaGAGCTTACAGAGTGTGGCATCCAACTGGACTCTC +
Preference number: 3 (lower is better)
Translates to: SLSCLKGLLQYK*SLQSVASNWTL
Trigger: GAGAGTCCAGTTGGATGCCACACTCTGTAAGCTTCATTTGTATTGAAGCAGACCCTTAAGACAACTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224705.2
CDS-3UTR CCA 90 bp GGCATCCAACTGGACTCTCATCTATTCAGGAGGCTAAGACAAAGGATCTTAAGTTCTCACCCAGCTCTCTaGCAACACGCCGTAAATTCC +
Preference number: 4 (lower is better)
Translates to: GIQLDSHLFRRLRQRILSSHPAL*QHAVNS
Trigger: GGAATTTACGGCGTGTTGCCAGAGAGCTGGGTGAGA...ACTTAAGATCCTTTGTCTTAGCCTCCTGAATAGATGAGAGTCCAGTTGGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224705.2
CDS-3UTR CCA 90 bp TCTGCTTCAATACAAATGAAGCTTACAGAGTGTGGCATCCAACTGGACTCTCATCAAACTCCTCTATCATaGCCCGGAGCTCCTCATCGC +
Preference number: 4 (lower is better)
Translates to: SASIQMKLTECGIQLDSHQTPLS*PGAPHR
Trigger: GCGATGAGGAGCTCCGGGCCATGATAGAGGAGTTTG...ATGAGAGTCCAGTTGGATGCCACACTCTGTAAGCTTCATTTGTATTGAAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224705.2
3UTR CAA 72 bp TCTGTCACTGCACGCGCTATCAGTACTTCAGACAGATaGGTCTATAAAACGCCCAGCGATACTCTGACAGAA +
Preference number: 4 (lower is better)
Translates to: SVTARAISTSDR*VYKTPSDTLTE
Trigger: TTCTGTCAGAGTATCGCTGGGCGTTTTATAGACCAATCTGTCTGAAGTACTGATAGCGCGTGCAGTGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224433.2
CDS-3UTR CCA 90 bp CAACTGGACTCTCATCTATTCAGGAGGCTAAGACAAAGGATCTTAAGTACCAGGATTCATGATAATCTATaGCTTGGTCTTTGTCGGTAT +
Preference number: 4 (lower is better)
Translates to: QLDSHLFRRLRQRILSTRIHDNL*LGLCRY
Trigger: ATACCGACAAAGACCAAGCCATAGATTATCATGAAT...CCTGGTACTTAAGATCCTTTGTCTTAGCCTCCTGAATAGATGAGAGTCCAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224705.2
CDS CCA 90 bp CCAAAGTTCTCGCTGGAGAAAGTGAGAAGCACTTCAACAGACAAGTaGGCTCTCTGCTCCTCTCTCCATCGCCGTCTTTGTCAAACTCCT +
Preference number: 5 (lower is better)
Translates to: PKFSLEKVRSTSTDK*ALCSSLHRRLCQTP
Trigger: AGGAGTTTGACAAAGACGGCGATGGAGAGAGGAGCAGAGAGCCCACTTGTCTGTTGAAGTGCTTCTCACTTTCTCCAGCGAGAACTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224168.2
CDS TCA 90 bp CTTTTGAGAAAAAGATGGTGTTTCCAAAGTTCTCGCTGGAGAAAGTaGGAAGCACTTCAACAGACAAGTGGGCTCTCTGCTCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: LLRKRWCFQSSRWRK*EALQQTSGLSAPLS
Trigger: GGAGAGAGGAGCAGAGAGCCCACTTGTCTGTTGAAGTGCTTCTCACTTTCTCCAGCGAGAACTTTGGAAACACCATCTTTTTCTCAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224168.2
CDS-3UTR CAA 90 bp AATACAAATGAAGCTTACAGAGTGTGGCATCCAACTGGACTCTCATCTATTCAGTCTCCATCGCCGTCTTaGTCAAACTCCTCTATCATG +
Preference number: 5 (lower is better)
Translates to: NTNEAYRVWHPTGLSSIQSPSPS*SNSSIM
Trigger: CATGATAGAGGAGTTTGACAAAGACGGCGATGGAGA...CTGAATAGATGAGAGTCCAGTTGGATGCCACACTCTGTAAGCTTCATTTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224705.2
CDS-3UTR CAA 90 bp CATCTATTCAGGAGGCTAAGACAAAGGATCTTAAGTACCAGGTCAAACTTGAAAAGCCCAAGGCTCTCATaGCCACCTTTAATTCATGAT +
Preference number: 5 (lower is better)
Translates to: HLFRRLRQRILSTRSNLKSPRLS*PPLIHD
Trigger: ATCATGAATTAAAGGTGGCAATGAGAGCCTTGGGCT...TTTCAAGTTTGACCTGGTACTTAAGATCCTTTGTCTTAGCCTCCTGAATAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224705.2
CDS-3UTR CAA 90 bp GCTTCAATACAAATGAAGCTTACAGAGTGTGGCATCCAACTGGACTCTCATCTAATGATAATCTATGGCTaGGTCTTTGTCGGTATCAAA +
Preference number: 5 (lower is better)
Translates to: ASIQMKLTECGIQLDSHLMIIYG*VFVGIK
Trigger: TTTGATACCGACAAAGACCAAGCCATAGATTATCAT...TAGATGAGAGTCCAGTTGGATGCCACACTCTGTAAGCTTCATTTGTATTGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224705.2
CDS CAA 72 bp CAAGTGGGCTCTCTGCTCCTCTCTCCATCGCCGTCTTaGTCAAACTCCTCTATCATGGCCCGGAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: QVGSLLLSPSPS*SNSSIMARSSS
Trigger: TGAGGAGCTCCGGGCCATGATAGAGGAGTTTGACAAAGACGGCGATGGAGAGAGGAGCAGAGAGCCCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224168.2
CDS CAA 90 bp TTCAACAGACAAGTGGGCTCTCTGCTCCTCTCTCCATCGCCGTCTTaGTCAAACTCCTCTATCATGGCCCGGAGCTCCTCATCGCTCATG +
Preference number: 6 (lower is better)
Translates to: FNRQVGSLLLSPSPS*SNSSIMARSSSSLM
Trigger: CATGAGCGATGAGGAGCTCCGGGCCATGATAGAGGAGTTTGACAAAGACGGCGATGGAGAGAGGAGCAGAGAGCCCACTTGTCTGTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224168.2
CDS CCA 72 bp TCGCTGGAGAAAGTGAGAAGCACTTCAACAGACAAGTaGGCTCTCTGCTCCTCTCTCCATCGCCGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: SLEKVRSTSTDK*ALCSSLHRRLC
Trigger: ACAAAGACGGCGATGGAGAGAGGAGCAGAGAGCCCACTTGTCTGTTGAAGTGCTTCTCACTTTCTCCAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224168.2
CDS CAA 72 bp AAAAGTAAGGTAAACTTACTCTCTCCATCGCCGTCTTaGTCAAACTCCTCTATCATGGCCCGGAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: KSKVNLLSPSPS*SNSSIMARSSS
Trigger: TGAGGAGCTCCGGGCCATGATAGAGGAGTTTGACAAAGACGGCGATGGAGAGAGTAAGTTTACCTTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224705.2
CDS TCA 72 bp TATATGTCACCAGTCATAATAGCAATGAATTCCTCTTaGTTTATCTCTCCATCGCCGTCTTTGTCAAACTCC +
Preference number: 6 (lower is better)
Translates to: YMSPVIIAMNSS*FISPSPSLSNS
Trigger: GGAGTTTGACAAAGACGGCGATGGAGAGATAAATCAAGAGGAATTCATTGCTATTATGACTGGTGACATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022009.10