Pregenerated sensors for CETN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031347Ensembl transcript IDs: ENSMUST00000033713.11, ENSMUST00000114550.8, ENSMUST00000114551.10
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTCTGCCCTGTTAAAGTTACCCCAGGTTaGGGGAGGGAGGCTTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SHTFRPFSPLYVLLFCPVKVTPG*GREAFK Trigger: TTTGAAAGCCTCCCTCCCCCAACCTGGGGTAACTTT...AACAGGGCAGAACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| 3UTR-3UTR GCA 90 bp | GGGTGGCCACAGTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTCTAGTCACATGTGCTTaGAGTAGAAAAAGAAACACT | + |
|
Preference number: 2 (lower is better) Translates to: GWPQSHFQTLFPTLCALVLVTCA*SRKRNT Trigger: AGTGTTTCTTTTTCTACTGCAAGCACATGTGACTAG...AACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGACTGTGGCCACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| 3UTR-3UTR CCA 90 bp | GCTTATGGTGACATGGATACATGGACAACTAAGAAGCCACTGCATGTTTTCAGTAAAGTTACCCCAGGTTaGGGGAGGGAGGCTTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: AYGDMDTWTTKKPLHVFSKVTPG*GREAFK Trigger: TTTGAAAGCCTCCCTCCCCCAACCTGGGGTAACTTT...ACTGAAAACATGCAGTGGCTTCTTAGTTGTCCATGTATCCATGTCACCATAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| 3UTR-3UTR GCA 90 bp | GCTTATGGTGACATGGATACATGGACAACTAAGAAGCCACTGCATGTTTTCAGTTTTCCCCACTCTATGTaGTCTTGTTCTGCCCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: AYGDMDTWTTKKPLHVFSFPHSM*SCSALL Trigger: CAACAGGGCAGAACAAGAGCACATAGAGTGGGGAAA...ACTGAAAACATGCAGTGGCTTCTTAGTTGTCCATGTATCCATGTCACCATAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| 3UTR-3UTR CCA 90 bp | AGTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTCTGCCCTGTTATAGATTCAAGGTCATaGCTAAAGTTACCCCAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: SHTFRPFSPLYVLLFCPVIDSRS*LKLPQV Trigger: AACCTGGGGTAACTTTAGCCATGACCTTGAATCTAT...AACAGGGCAGAACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| 3UTR-3UTR GCA 90 bp | CAACTAAGAAGCCACTGCATGTTTTCAGTCGAGTGGATATGCATGAGCAAGGTGCTAGTCACATGTGCTTaGAGTAGAAAAAGAAACACT | + |
|
Preference number: 2 (lower is better) Translates to: QLRSHCMFSVEWICMSKVLVTCA*SRKRNT Trigger: AGTGTTTCTTTTTCTACTGCAAGCACATGTGACTAG...CACCTTGCTCATGCATATCCACTCGACTGAAAACATGCAGTGGCTTCTTAGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTAAGAACAACCACTGCTTATGGTGACATGGATACATGGACAACTAAGAAGTTTCCCCACTCTATGTaGTCTTGTTCTGCCCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: TLRTTTAYGDMDTWTTKKFPHSM*SCSALL Trigger: CAACAGGGCAGAACAAGAGCACATAGAGTGGGGAAA...CTTCTTAGTTGTCCATGTATCCATGTCACCATAAGCAGTGGTTGTTCTTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| 3UTR-3UTR GCA 90 bp | CCACTGCATGTTTTCAGTCGAGTGGATATGCATGAGCAAGGTGAAGTAATGGAACTAGTCACATGTGCTTaGAGTAGAAAAAGAAACACT | + |
|
Preference number: 2 (lower is better) Translates to: PLHVFSRVDMHEQGEVMELVTCA*SRKRNT Trigger: AGTGTTTCTTTTTCTACTGCAAGCACATGTGACTAG...TTCCATTACTTCACCTTGCTCATGCATATCCACTCGACTGAAAACATGCAGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| 3UTR-3UTR CCA 90 bp | GCTTATGGTGACATGGATACATGGACAACTAAGAAGCCACTGCATGTTTTCAGTATAGATTCAAGGTCATaGCTAAAGTTACCCCAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: AYGDMDTWTTKKPLHVFSIDSRS*LKLPQV Trigger: AACCTGGGGTAACTTTAGCCATGACCTTGAATCTAT...ACTGAAAACATGCAGTGGCTTCTTAGTTGTCCATGTATCCATGTCACCATAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| 3UTR-3UTR CAA 90 bp | GATATGCATGAGCAAGGTGAAGTAATGGAAGGTGGGGTGGCCACAGTCACACTTCCACTCTATGTGCTCTaGTTCTGCCCTGTTGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: DMHEQGEVMEGGVATVTLPLYVL*FCPVDL Trigger: TAAATCAACAGGGCAGAACAAGAGCACATAGAGTGG...AAGTGTGACTGTGGCCACCCCACCTTCCATTACTTCACCTTGCTCATGCATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| 3UTR-3UTR CAA 90 bp | GAACAACCACTGCTTATGGTGACATGGATACATGGACAACTAAGAAGCCACTGCCCACTCTATGTGCTCTaGTTCTGCCCTGTTGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: EQPLLMVTWIHGQLRSHCPLYVL*FCPVDL Trigger: TAAATCAACAGGGCAGAACAAGAGCACATAGAGTGG...GCAGTGGCTTCTTAGTTGTCCATGTATCCATGTCACCATAAGCAGTGGTTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| 3UTR GCA 72 bp | ATGGTGACATGGATACATGGACAACTAAGAAGCCACTaGATGTTTTCAGTCGAGTGGATATGCATGAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: MVTWIHGQLRSH*MFSVEWICMSK Trigger: CTTGCTCATGCATATCCACTCGACTGAAAACATGCAGTGGCTTCTTAGTTGTCCATGTATCCATGTCACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| 3UTR CCA 72 bp | TTAAGAACAACCACTGCTTATGGTGACATGGATACATaGACAACTAAGAAGCCACTGCATGTTTTCAGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: LRTTTAYGDMDT*TTKKPLHVFSR Trigger: TCGACTGAAAACATGCAGTGGCTTCTTAGTTGTCCATGTATCCATGTCACCATAAGCAGTGGTTGTTCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCCACAGTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTGGCTGGTCTTTTTCATaGTGCGCAGGAACTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWPQSHFQTLFPTLCALVGWSFS*CAGTLA Trigger: AGCAAGAGTTCCTGCGCATCATGAAAAAGACCAGCC...AACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGACTGTGGCCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR GCA 90 bp | CACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTCTGCCCTGTTGATGCCCAGGGCCCTCATTaGCACCTTCAGTTCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HTFRPFSPLYVLLFCPVDAQGPH*HLQFFD Trigger: ATCAAAGAACTGAAGGTGGCAATGAGGGCCCTGGGC...ATCAACAGGGCAGAACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR GCA 90 bp | GGGTGGCCACAGTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTATGCGCAGGAACTCTTaGTCATTGACCTCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GWPQSHFQTLFPTLCALVMRRNS*SLTSPS Trigger: AGATGGTGAGGTCAATGAGCAAGAGTTCCTGCGCAT...AACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGACTGTGGCCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCCACAGTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTTTTTTCTCTGGGCACTaGATGCCATGGTTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GWPQSHFQTLFPTLCALVFFSGH*MPWLSS Trigger: AGAAGACAACCATGGCATCCAGTGCCCAGAGAAAAA...AACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGACTGTGGCCACCC 49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000114551.10 |
||
| CDS-3UTR TCA 90 bp | GGACAACTAAGAAGCCACTGCATGTTTTCAGTCGAGTGGATATGCATGAGCAAGGGCTGGTCTTTTTCATaGTGCGCAGGAACTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQLRSHCMFSVEWICMSKGWSFS*CAGTLA Trigger: AGCAAGAGTTCCTGCGCATCATGAAAAAGACCAGCC...CTTGCTCATGCATATCCACTCGACTGAAAACATGCAGTGGCTTCTTAGTTGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR GCA 90 bp | GTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTCTGCCCTGTTGTCTCTGGGCACTGGATaGCATGGTTGTCTTCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTLSDPFPHSMCSCSALLSLGTG*HGCLLK Trigger: TTTAAGAAGACAACCATGGCATCCAGTGCCCAGAGA...CAACAGGGCAGAACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114551.10 |
||
| CDS-3UTR TCA 90 bp | CCACTGCATGTTTTCAGTCGAGTGGATATGCATGAGCAAGGTGAAGTAATGGAAGGAACTCTTGCTCATTaGCCTCACCATCTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLHVFSRVDMHEQGEVMEGTLAH*PHHLHL Trigger: GAGATGGAGATGGTGAGGTCAATGAGCAAGAGTTCC...TTCCATTACTTCACCTTGCTCATGCATATCCACTCGACTGAAAACATGCAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR GCA 90 bp | CATGGACAACTAAGAAGCCACTGCATGTTTTCAGTCGAGTGGATATGCATGAGCATGCGCAGGAACTCTTaGTCATTGACCTCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HGQLRSHCMFSVEWICMSMRRNS*SLTSPS Trigger: AGATGGTGAGGTCAATGAGCAAGAGTTCCTGCGCAT...GCTCATGCATATCCACTCGACTGAAAACATGCAGTGGCTTCTTAGTTGTCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR TCA 90 bp | GCTTATGGTGACATGGATACATGGACAACTAAGAAGCCACTGCATGTTTTCAGTGGCTGGTCTTTTTCATaGTGCGCAGGAACTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AYGDMDTWTTKKPLHVFSGWSFS*CAGTLA Trigger: AGCAAGAGTTCCTGCGCATCATGAAAAAGACCAGCC...ACTGAAAACATGCAGTGGCTTCTTAGTTGTCCATGTATCCATGTCACCATAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR GCA 90 bp | TGCCAGGCACTAAATCTAGTCACATGTGCTTGCAGTAGAAAAAGAAACACTGATGCCCAGGGCCCTCATTaGCACCTTCAGTTCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CQALNLVTCACSRKRNTDAQGPH*HLQFFD Trigger: ATCAAAGAACTGAAGGTGGCAATGAGGGCCCTGGGC...ATCAGTGTTTCTTTTTCTACTGCAAGCACATGTGACTAGATTTAGTGCCTGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CCA 90 bp | GAACAACCACTGCTTATGGTGACATGGATACATGGACAACTAAGAAGCCACTGCCGGATTTCCTGTTTCTaGTCTTCAGTAAGTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQPLLMVTWIHGQLRSHCRISCF*SSVSSG Trigger: GCCTGAACTTACTGAAGACCAGAAACAGGAAATCCG...GCAGTGGCTTCTTAGTTGTCCATGTATCCATGTCACCATAAGCAGTGGTTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CCA 90 bp | CATGGACAACTAAGAAGCCACTGCATGTTTTCAGTCGAGTGGATATGCATGAGCCGGATTTCCTGTTTCTaGTCTTCAGTAAGTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HGQLRSHCMFSVEWICMSRISCF*SSVSSG Trigger: GCCTGAACTTACTGAAGACCAGAAACAGGAAATCCG...GCTCATGCATATCCACTCGACTGAAAACATGCAGTGGCTTCTTAGTTGTCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR TCA 90 bp | GTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTCTGCCCTGTTGCATCATCGAACAACTTaGAAGCTTTCAGGATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTLSDPFPHSMCSCSALLHHRTT*KLSGFL Trigger: AAGAAATCCTGAAAGCTTTCAAGTTGTTCGATGATG...CAACAGGGCAGAACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR GCA 90 bp | AAAACCACTTTAAGAACAACCACTGCTTATGGTGACATGGATACATGGACAACTGCCCAGGGCCCTCATTaGCACCTTCAGTTCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KTTLRTTTAYGDMDTWTTAQGPH*HLQFFD Trigger: ATCAAAGAACTGAAGGTGGCAATGAGGGCCCTGGGC...AGTTGTCCATGTATCCATGTCACCATAAGCAGTGGTTGTTCTTAAAGTGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR GCA 90 bp | GGACAACTAAGAAGCCACTGCATGTTTTCAGTCGAGTGGATATGCATGAGCAAGTCATCAATCATTTCCTaGAGTTCCTCATCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQLRSHCMFSVEWICMSKSSIIS*SSSSVR Trigger: CCTGACAGATGAGGAACTGCAGGAAATGATTGATGA...CTTGCTCATGCATATCCACTCGACTGAAAACATGCAGTGGCTTCTTAGTTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR TCA 90 bp | AGTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTCTGCCCTGTTCATCATCGAACAACTTaGAAGCTTTCAGGATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHTFRPFSPLYVLLFCPVHHRTT*KLSGFL Trigger: AAGAAATCCTGAAAGCTTTCAAGTTGTTCGATGATG...AACAGGGCAGAACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR TCA 90 bp | AAAACCACTTTAAGAACAACCACTGCTTATGGTGACATGGATACATGGACAACTGGAACTCTTGCTCATTaGCCTCACCATCTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTTLRTTTAYGDMDTWTTGTLAH*PHHLHL Trigger: GAGATGGAGATGGTGAGGTCAATGAGCAAGAGTTCC...AGTTGTCCATGTATCCATGTCACCATAAGCAGTGGTTGTTCTTAAAGTGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR GCA 90 bp | TGCCAGGCACTAAATCTAGTCACATGTGCTTGCAGTAGAAAAAGAAACACTGATATGCGCAGGAACTCTTaGTCATTGACCTCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CQALNLVTCACSRKRNTDMRRNS*SLTSPS Trigger: AGATGGTGAGGTCAATGAGCAAGAGTTCCTGCGCAT...ATCAGTGTTTCTTTTTCTACTGCAAGCACATGTGACTAGATTTAGTGCCTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CCA 90 bp | AAAGCCATATTTCACAAAATGCCAGGCACTAAATCTAGTCACATGTGCTTGCAGCTCATCCTTTTTCTCTaGGCACTGGATGCCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KAIFHKMPGTKSSHMCLQLILFL*ALDAMV Trigger: AACCATGGCATCCAGTGCCCAGAGAAAAAGGATGAG...CTGCAAGCACATGTGACTAGATTTAGTGCCTGGCATTTTGTGAAATATGGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114551.10 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGCACTAAATCTAGTCACATGTGCTTGCAGTAGAAAAAGAAACACTGATCGGATTTCCTGTTTCTaGTCTTCAGTAAGTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CQALNLVTCACSRKRNTDRISCF*SSVSSG Trigger: GCCTGAACTTACTGAAGACCAGAAACAGGAAATCCG...ATCAGTGTTTCTTTTTCTACTGCAAGCACATGTGACTAGATTTAGTGCCTGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR GCA 90 bp | TATTTCACAAAATGCCAGGCACTAAATCTAGTCACATGTGCTTGCAGTAGAAAATCATCAATCATTTCCTaGAGTTCCTCATCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YFTKCQALNLVTCACSRKSSIIS*SSSSVR Trigger: CCTGACAGATGAGGAACTGCAGGAAATGATTGATGA...TTTTCTACTGCAAGCACATGTGACTAGATTTAGTGCCTGGCATTTTGTGAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR TCA 90 bp | TATTTCACAAAATGCCAGGCACTAAATCTAGTCACATGTGCTTGCAGTAGAAAACATCATCGAACAACTTaGAAGCTTTCAGGATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YFTKCQALNLVTCACSRKHHRTT*KLSGFL Trigger: AAGAAATCCTGAAAGCTTTCAAGTTGTTCGATGATG...TTTTCTACTGCAAGCACATGTGACTAGATTTAGTGCCTGGCATTTTGTGAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | GGGTGGCCACAGTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTTTCTCACCCAGCTCCTaGGCCACGCGCTTAAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: GWPQSHFQTLFPTLCALVFSPSS*ATRLRF Trigger: GAATCTTAAGCGCGTGGCCAAGGAGCTGGGTGAGAA...AACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGACTGTGGCCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | GTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTCTGCCCTGTTGTTCTCACCCAGCTCCTaGGCCACGCGCTTAAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: VTLSDPFPHSMCSCSALLFSPSS*ATRLRF Trigger: GAATCTTAAGCGCGTGGCCAAGGAGCTGGGTGAGAA...CAACAGGGCAGAACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | GAACAACCACTGCTTATGGTGACATGGATACATGGACAACTAAGAAGCCACTGCTTCTCACCCAGCTCCTaGGCCACGCGCTTAAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: EQPLLMVTWIHGQLRSHCFSPSS*ATRLRF Trigger: GAATCTTAAGCGCGTGGCCAAGGAGCTGGGTGAGAA...GCAGTGGCTTCTTAGTTGTCCATGTATCCATGTCACCATAAGCAGTGGTTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | ACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTCTGCCCTGTTGATTGATGCGCAGGAACTCTaGCTCATTGACCTCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: TLSDPFPHSMCSCSALLIDAQEL*LIDLTI Trigger: GATGGTGAGGTCAATGAGCAAGAGTTCCTGCGCATC...AATCAACAGGGCAGAACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | GGGTGGCCACAGTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTGCCACCTTCAGTTCTTaGATGTCTATAGTTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GWPQSHFQTLFPTLCALVATFSS*MSIVPV Trigger: AACTGGAACTATAGACATCAAAGAACTGAAGGTGGC...AACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGACTGTGGCCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | GATATGCATGAGCAAGGTGAAGTAATGGAAGGTGGGGTGGCCACAGTCACACTTGCCACCTTCAGTTCTTaGATGTCTATAGTTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DMHEQGEVMEGGVATVTLATFSS*MSIVPV Trigger: AACTGGAACTATAGACATCAAAGAACTGAAGGTGGC...AAGTGTGACTGTGGCCACCCCACCTTCCATTACTTCACCTTGCTCATGCATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | AAAGCCATATTTCACAAAATGCCAGGCACTAAATCTAGTCACATGTGCTTGCAGGATGCGCAGGAACTCTaGCTCATTGACCTCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: KAIFHKMPGTKSSHMCLQDAQEL*LIDLTI Trigger: GATGGTGAGGTCAATGAGCAAGAGTTCCTGCGCATC...CTGCAAGCACATGTGACTAGATTTAGTGCCTGGCATTTTGTGAAATATGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | CAACTAAGAAGCCACTGCATGTTTTCAGTCGAGTGGATATGCATGAGCAAGGTGGCCACCTTCAGTTCTTaGATGTCTATAGTTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QLRSHCMFSVEWICMSKVATFSS*MSIVPV Trigger: AACTGGAACTATAGACATCAAAGAACTGAAGGTGGC...CACCTTGCTCATGCATATCCACTCGACTGAAAACATGCAGTGGCTTCTTAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | AAAACCACTTTAAGAACAACCACTGCTTATGGTGACATGGATACATGGACAACTGATGCGCAGGAACTCTaGCTCATTGACCTCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: KTTLRTTTAYGDMDTWTTDAQEL*LIDLTI Trigger: GATGGTGAGGTCAATGAGCAAGAGTTCCTGCGCATC...AGTTGTCCATGTATCCATGTCACCATAAGCAGTGGTTGTTCTTAAAGTGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | AGTCACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTCTGCCCTGTTTCATCATCGAACAACTaGAAAGCTTTCAGGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHTFRPFSPLYVLLFCPVSSSNN*KAFRIS Trigger: AGAAATCCTGAAAGCTTTCAAGTTGTTCGATGATGA...AACAGGGCAGAACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | ACACTTTCAGACCCTTTTCCCCACTCTATGTGCTCTTGTTCTGCCCTGTTGATTACGCGCTTAAGATTCTaGAATGATATTTTCCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLSDPFPHSMCSCSALLITRLRF*NDIFPV Trigger: GACTGGGAAAATATCATTCAAGAATCTTAAGCGCGT...AATCAACAGGGCAGAACAAGAGCACATAGAGTGGGGAAAAGGGTCTGAAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | CCACTGCATGTTTTCAGTCGAGTGGATATGCATGAGCAAGGTGAAGTAATGGAAACGCGCTTAAGATTCTaGAATGATATTTTCCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLHVFSRVDMHEQGEVMETRLRF*NDIFPV Trigger: GACTGGGAAAATATCATTCAAGAATCTTAAGCGCGT...TTCCATTACTTCACCTTGCTCATGCATATCCACTCGACTGAAAACATGCAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | TATTTCACAAAATGCCAGGCACTAAATCTAGTCACATGTGCTTGCAGTAGAAAAACGCGCTTAAGATTCTaGAATGATATTTTCCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: YFTKCQALNLVTCACSRKTRLRF*NDIFPV Trigger: GACTGGGAAAATATCATTCAAGAATCTTAAGCGCGT...TTTTCTACTGCAAGCACATGTGACTAGATTTAGTGCCTGGCATTTTGTGAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS-3UTR CAA 90 bp | TATTTCACAAAATGCCAGGCACTAAATCTAGTCACATGTGCTTGCAGTAGAAAATCATCATCGAACAACTaGAAAGCTTTCAGGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YFTKCQALNLVTCACSRKSSSNN*KAFRIS Trigger: AGAAATCCTGAAAGCTTTCAAGTTGTTCGATGATGA...TTTTCTACTGCAAGCACATGTGACTAGATTTAGTGCCTGGCATTTTGTGAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS CAA 90 bp | ATCATTTCCTGCAGTTCCTCATCTGTCAGGTTCTCACCCAGCTCCTaGGCCACGCGCTTAAGATTCTTGAATGATATTTTCCCAGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: IISCSSSSVRFSPSS*ATRLRFLNDIFPVS Trigger: TGAGACTGGGAAAATATCATTCAAGAATCTTAAGCGCGTGGCCAAGGAGCTGGGTGAGAACCTGACAGATGAGGAACTGCAGGAAATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS CAA 72 bp | TGCAGTTCCTCATCTGTCAGGTTCTCACCCAGCTCCTaGGCCACGCGCTTAAGATTCTTGAATGATATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSSSSVRFSPSS*ATRLRFLNDIF Trigger: GAAAATATCATTCAAGAATCTTAAGCGCGTGGCCAAGGAGCTGGGTGAGAACCTGACAGATGAGGAACTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033713.11 ENSMUST00000114550.8 ENSMUST00000114551.10 |
||
| CDS CCA 72 bp | TCAGTAAGTTCAGGCTTAGGACTCATCCTTTTTCTCTaGGCACTGGATGCCATGGTTGTCTTCTTAAAATTA | + |
|
Preference number: 6 (lower is better) Translates to: SVSSGLGLILFL*ALDAMVVFLKL Trigger: TAATTTTAAGAAGACAACCATGGCATCCAGTGCCCAGAGAAAAAGGATGAGTCCTAAGCCTGAACTTACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114551.10 |
||