Pregenerated sensors for CETN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050996Ensembl transcript IDs: ENSMUST00000062769.7, ENSMUST00000234003.2, ENSMUST00000234590.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCCAGGGAAACCAGAAGAGGACATCAGACCCCATGGGGCTTCGTaGGTTTCATGCAGTTATAAGCTGTCCAGTGTGGGTCCTCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: CPGKPEEDIRPHGAS*VSCSYKLSSVGPLQ Trigger: CTGCAGAGGACCCACACTGGACAGCTTATAACTGCATGAAACCCACGAAGCCCCATGGGGTCTGATGTCCTCTTCTGGTTTCCCTGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR CCA 90 bp | CCCATGGGGCTTCGTGGGTTTCATGCAGTTATAAGCTGTCCAGTGTaGGTCCTCTGCAGTAGCTCTCTTAACCACTGGGCTATCCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: PMGLRGFHAVISCPV*VLCSSSLNHWAIPL Trigger: CAGAGGGATAGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGGACAGCTTATAACTGCATGAAACCCACGAAGCCCCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR TCA 90 bp | TGTGGGTCCTCTGCAGTAGCTCTCTTAACCACTGGGCTATCCCTCTaGCACCTGAGGAGTCTTCCTGGAACCCCACCTCTTGTCTTTTTC | + |
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Preference number: 1 (lower is better) Translates to: CGSSAVALLTTGLSL*HLRSLPGTPPLVFF Trigger: GAAAAAGACAAGAGGTGGGGTTCCAGGAAGACTCCTCAGGTGTCAGAGGGATAGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR GCA 90 bp | CTTCGTGGGTTTCATGCAGTTATAAGCTGTCCAGTGTGGGTCCTCTaGAGTAGCTCTCTTAACCACTGGGCTATCCCTCTGACACCTGAG | + |
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Preference number: 1 (lower is better) Translates to: LRGFHAVISCPVWVL*SSSLNHWAIPLTPE Trigger: CTCAGGTGTCAGAGGGATAGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGGACAGCTTATAACTGCATGAAACCCACGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR CCA 90 bp | TCTCTTAACCACTGGGCTATCCCTCTGACACCTGAGGAGTCTTCCTaGAACCCCACCTCTTGTCTTTTTCTCATGGAACCCAGTGGCACA | + |
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Preference number: 1 (lower is better) Translates to: SLNHWAIPLTPEESS*NPTSCLFLMEPSGT Trigger: TGTGCCACTGGGTTCCATGAGAAAAAGACAAGAGGTGGGGTTCCAGGAAGACTCCTCAGGTGTCAGAGGGATAGCCCAGTGGTTAAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR TCA 90 bp | CATCCTCAGTTCTCTATTTACTTTTCTCACACCATGCTAGGTCACTaGCTTGAAATGAAGGAATCACCAGAATATTCGTGTTATTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: HPQFSIYFSHTMLGH*LEMKESPEYSCYLE Trigger: TTCTAAATAACACGAATATTCTGGTGATTCCTTCATTTCAAGTCAGTGACCTAGCATGGTGTGAGAAAAGTAAATAGAGAACTGAGGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTCTTAACCACTGGGCTATCCCTCTGACACCTGAGGAGTCTTCCTGGAACCTTGTCTTTTTCTCATaGAACCCAGTGGCACAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SSLNHWAIPLTPEESSWNLVFFS*NPVAQV Trigger: GACCTGTGCCACTGGGTTCCATGAGAAAAAGACAAG...GTTCCAGGAAGACTCCTCAGGTGTCAGAGGGATAGCCCAGTGGTTAAGAGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGTCTTCCTGGAACCCCACCTCTTGTCTTTTTCTCATGGAACCCAGTGGCAACCACGATTTTATTTaGCCGAGGAAGCTGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: EESSWNPTSCLFLMEPSGNHDFI*PRKLSS Trigger: AGAGGACAGCTTCCTCGGTCAAATAAAATCGTGGTT...GCCACTGGGTTCCATGAGAAAAAGACAAGAGGTGGGGTTCCAGGAAGACTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTCCAGTGTGGGTCCTCTGCAGTAGCTCTCTTAACCACTGGGCTATCCCTCTTCAGTTTAATGAATaGCAAGCACTGAGTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: SCPVWVLCSSSLNHWAIPLQFNE*QALSGL Trigger: GAGTCCACTCAGTGCTTGCCATTCATTAAACTGAAG...AGGGATAGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGGACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGTCTTCCTGGAACCCCACCTCTTGTCTTTTTCTCATGGAACCCAGTGGCCAGGTCCTAATTCTTTaGAGATCATGTGCCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: EESSWNPTSCLFLMEPSGQVLIL*RSCASR Trigger: TCTGGAGGCACATGATCTCCAAAGAATTAGGACCTG...GCCACTGGGTTCCATGAGAAAAAGACAAGAGGTGGGGTTCCAGGAAGACTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAGCTCTCTTAACCACTGGGCTATCCCTCTGACACCTGAGGAGTCTTCCTGGCAGGTCCTAATTCTTTaGAGATCATGTGCCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SSSLNHWAIPLTPEESSWQVLIL*RSCASR Trigger: TCTGGAGGCACATGATCTCCAAAGAATTAGGACCTG...CCAGGAAGACTCCTCAGGTGTCAGAGGGATAGCCCAGTGGTTAAGAGAGCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR-3UTR CCA 90 bp | CATGCAGTTATAAGCTGTCCAGTGTGGGTCCTCTGCAGTAGCTCTCTTAACCACCTTGTCTTTTTCTCATaGAACCCAGTGGCACAGGTC | + |
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Preference number: 2 (lower is better) Translates to: HAVISCPVWVLCSSSLNHLVFFS*NPVAQV Trigger: GACCTGTGCCACTGGGTTCCATGAGAAAAAGACAAG...GTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGGACAGCTTATAACTGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR-3UTR TCA 90 bp | GTTATAAGCTGTCCAGTGTGGGTCCTCTGCAGTAGCTCTCTTAACCACTGGGCTACCATGCTAGGTCACTaGCTTGAAATGAAGGAATCA | + |
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Preference number: 2 (lower is better) Translates to: VISCPVWVLCSSSLNHWATMLGH*LEMKES Trigger: TGATTCCTTCATTTCAAGTCAGTGACCTAGCATGGT...AGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGGACAGCTTATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR CCA 72 bp | CCAGTGTGGGTCCTCTGCAGTAGCTCTCTTAACCACTaGGCTATCCCTCTGACACCTGAGGAGTCTTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: PVWVLCSSSLNH*AIPLTPEESSW Trigger: CCAGGAAGACTCCTCAGGTGTCAGAGGGATAGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR TCA 72 bp | TCTGCAGTAGCTCTCTTAACCACTGGGCTATCCCTCTaGCACCTGAGGAGTCTTCCTGGAACCCCACCTCTT | + |
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Preference number: 3 (lower is better) Translates to: SAVALLTTGLSL*HLRSLPGTPPL Trigger: AAGAGGTGGGGTTCCAGGAAGACTCCTCAGGTGTCAGAGGGATAGCCCAGTGGTTAAGAGAGCTACTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGTGTGGGTCCTCTGCAGTAGCTCTCTTAACCACTGGGCTATCCCTCTGACACTGGAACCCCACCTCTaGTCTTTTTCTCATGGAACC | + |
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Preference number: 3 (lower is better) Translates to: PVWVLCSSSLNHWAIPLTLEPHL*SFSHGT Trigger: GGTTCCATGAGAAAAAGACAAGAGGTGGGGTTCCAG...TGTCAGAGGGATAGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR CCA 72 bp | CTTCGTGGGTTTCATGCAGTTATAAGCTGTCCAGTGTaGGTCCTCTGCAGTAGCTCTCTTAACCACTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: LRGFHAVISCPV*VLCSSSLNHWA Trigger: AGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGGACAGCTTATAACTGCATGAAACCCACGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR CCA 72 bp | AAACCAGAAGAGGACATCAGACCCCATGGGGCTTCGTaGGTTTCATGCAGTTATAAGCTGTCCAGTGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: KPEEDIRPHGAS*VSCSYKLSSVG Trigger: ACCCACACTGGACAGCTTATAACTGCATGAAACCCACGAAGCCCCATGGGGTCTGATGTCCTCTTCTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR GCA 72 bp | TTTCATGCAGTTATAAGCTGTCCAGTGTGGGTCCTCTaGAGTAGCTCTCTTAACCACTGGGCTATCCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: FHAVISCPVWVL*SSSLNHWAIPL Trigger: CAGAGGGATAGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGGACAGCTTATAACTGCATGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR CCA 72 bp | AGTCTTCCTGGAACCCCACCTCTTGTCTTTTTCTCATaGAACCCAGTGGCACAGGTCCTAATTCTTTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SLPGTPPLVFFS*NPVAQVLILWR Trigger: TCTCCAAAGAATTAGGACCTGTGCCACTGGGTTCCATGAGAAAAAGACAAGAGGTGGGGTTCCAGGAAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR CCA 72 bp | TTCTCATGGAACCCAGTGGCACAGGTCCTAATTCTTTaGAGATCATGTGCCTCCAGAGCATTCTGTTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: FSWNPVAQVLIL*RSCASRAFCFH Trigger: ATGAAAACAGAATGCTCTGGAGGCACATGATCTCCAAAGAATTAGGACCTGTGCCACTGGGTTCCATGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR TCA 72 bp | TTCTCTATTTACTTTTCTCACACCATGCTAGGTCACTaGCTTGAAATGAAGGAATCACCAGAATATTCGTGT | + |
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Preference number: 3 (lower is better) Translates to: FSIYFSHTMLGH*LEMKESPEYSC Trigger: ACACGAATATTCTGGTGATTCCTTCATTTCAAGTCAGTGACCTAGCATGGTGTGAGAAAAGTAAATAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR TCA 72 bp | TATTTACTTTTCTCACACCATGCTAGGTCACTGACTTaGAATGAAGGAATCACCAGAATATTCGTGTTATTT | + |
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Preference number: 3 (lower is better) Translates to: YLLFSHHARSLT*NEGITRIFVLF Trigger: AAATAACACGAATATTCTGGTGATTCCTTCATTTCAAGTCAGTGACCTAGCATGGTGTGAGAAAAGTAAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR TCA 90 bp | CCAGTGTGGGTCCTCTGCAGTAGCTCTCTTAACCACTGGGCTATCCCTCTGACAGGTAGAGGCAACGTTTaGCTTCCTGAAGGTGGACGC | + |
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Preference number: 4 (lower is better) Translates to: PVWVLCSSSLNHWAIPLTGRGNV*LPEGGR Trigger: GCGTCCACCTTCAGGAAGTCAAACGTTGCCTCTACC...TGTCAGAGGGATAGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR TCA 90 bp | GTTATAAGCTGTCCAGTGTGGGTCCTCTGCAGTAGCTCTCTTAACCACTGGGCTGGTAGAGGCAACGTTTaGCTTCCTGAAGGTGGACGC | + |
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Preference number: 4 (lower is better) Translates to: VISCPVWVLCSSSLNHWAGRGNV*LPEGGR Trigger: GCGTCCACCTTCAGGAAGTCAAACGTTGCCTCTACC...AGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGGACAGCTTATAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR TCA 90 bp | GTTATAAGCTGTCCAGTGTGGGTCCTCTGCAGTAGCTCTCTTAACCACTGGGCTCGTCATCAAACAACCTaGAAGCCTTCAGGATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VISCPVWVLCSSSLNHWARHQTT*KPSGFP Trigger: AGGAAATCCTGAAGGCTTTCAGGTTGTTTGATGACG...AGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGGACAGCTTATAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR TCA 90 bp | AAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAAGCAGGGACTTCTCGGCCATCTTCTaGGTCATCACAGCCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KEQTTAVLSYFHKSRSRDFSAIF*VITAKK Trigger: CTTCTTGGCTGTGATGACTCAGAAGATGGCCGAGAA...GTCCCTGCTTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR TCA 90 bp | GCAGGAAGAAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAATTCTCGGCCATCTTCTaGGTCATCACAGCCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: AGRRNRPQLFCHTFTKAEFSAIF*VITAKK Trigger: CTTCTTGGCTGTGATGACTCAGAAGATGGCCGAGAA...TTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTTCTTCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR CCA 90 bp | CCTCTTGTCTTTTTCTCATGGAACCCAGTGGCACAGGTCCTAATTCTTTGGAGATCATCTCTTCCTTCCTaGGTTCAAAGCCAAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: PLVFFSWNPVAQVLILWRSSLPS*VQSQVL Trigger: GAGCACTTGGCTTTGAACCCAGGAAGGAAGAGATGA...TCTCCAAAGAATTAGGACCTGTGCCACTGGGTTCCATGAGAAAAAGACAAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR CCA 90 bp | AAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAAGCAGGGACTCATCTCTTCCTTCCTaGGTTCAAAGCCAAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KEQTTAVLSYFHKSRSRDSSLPS*VQSQVL Trigger: GAGCACTTGGCTTTGAACCCAGGAAGGAAGAGATGA...GTCCCTGCTTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR CCA 90 bp | GAAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAAGCAGGGATCATCTCTTCCTTCCTaGGTTCAAAGCCAAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: EGTDHSCSVILSQKQKQGSSLPS*VQSQVL Trigger: GAGCACTTGGCTTTGAACCCAGGAAGGAAGAGATGA...TCCCTGCTTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR TCA 90 bp | AAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAAGCAGGGACCGTCATCAAACAACCTaGAAGCCTTCAGGATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: KEQTTAVLSYFHKSRSRDRHQTT*KPSGFP Trigger: AGGAAATCCTGAAGGCTTTCAGGTTGTTTGATGACG...GTCCCTGCTTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR TCA 90 bp | CCTCTTGTCTTTTTCTCATGGAACCCAGTGGCACAGGTCCTAATTCTTTGGAGACGTCATCAAACAACCTaGAAGCCTTCAGGATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PLVFFSWNPVAQVLILWRRHQTT*KPSGFP Trigger: AGGAAATCCTGAAGGCTTTCAGGTTGTTTGATGACG...TCTCCAAAGAATTAGGACCTGTGCCACTGGGTTCCATGAGAAAAAGACAAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| 3UTR CAA 72 bp | TTTCTCATGGAACCCAGTGGCACAGGTCCTAATTCTTaGGAGATCATGTGCCTCCAGAGCATTCTGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: FLMEPSGTGPNS*EIMCLQSILFS Trigger: TGAAAACAGAATGCTCTGGAGGCACATGATCTCCAAAGAATTAGGACCTGTGCCACTGGGTTCCATGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR TCA 90 bp | TTATTTAGAATCACTAAAGTGACCAGAGAACCACGATTTTATTTGACCGAGGAAGGTAGAGGCAACGTTTaGCTTCCTGAAGGTGGACGC | + |
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Preference number: 4 (lower is better) Translates to: LFRITKVTREPRFYLTEEGRGNV*LPEGGR Trigger: GCGTCCACCTTCAGGAAGTCAAACGTTGCCTCTACC...TTCCTCGGTCAAATAAAATCGTGGTTCTCTGGTCACTTTAGTGATTCTAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR TCA 90 bp | GAAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAAGCAGGGACTTGAGGTTTTTGAATaGAATTTTCCCAGTTTCGTC | + |
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Preference number: 4 (lower is better) Translates to: EGTDHSCSVILSQKQKQGLEVFE*NFPSFV Trigger: GACGAAACTGGGAAAATTTCATTCAAAAACCTCAAG...TCCCTGCTTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR TCA 90 bp | GCAGGAAGAAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAACTTGAGGTTTTTGAATaGAATTTTCCCAGTTTCGTC | + |
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Preference number: 4 (lower is better) Translates to: AGRRNRPQLFCHTFTKAELEVFE*NFPSFV Trigger: GACGAAACTGGGAAAATTTCATTCAAAAACCTCAAG...TTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTTCTTCCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR TCA 90 bp | TTATTTAGAATCACTAAAGTGACCAGAGAACCACGATTTTATTTGACCGAGGAACTTGAGGTTTTTGAATaGAATTTTCCCAGTTTCGTC | + |
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Preference number: 4 (lower is better) Translates to: LFRITKVTREPRFYLTEELEVFE*NFPSFV Trigger: GACGAAACTGGGAAAATTTCATTCAAAAACCTCAAG...TTCCTCGGTCAAATAAAATCGTGGTTCTCTGGTCACTTTAGTGATTCTAAATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | GGAAACCAGAAGAGGACATCAGACCCCATGGGGCTTCGTGGGTTTCATGCAGTTCTTTCCCCCAGCTCATaGGCCACACGCTTGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: GNQKRTSDPMGLRGFHAVLSPSS*ATRLRF Trigger: AAACCTCAAGCGTGTGGCCAATGAGCTGGGGGAAAG...AACTGCATGAAACCCACGAAGCCCCATGGGGTCTGATGTCCTCTTCTGGTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | CCAGTGGCACAGGTCCTAATTCTTTGGAGATCATGTGCCTCCAGAGCATTCTGTCTTTCCCCCAGCTCATaGGCCACACGCTTGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: PVAQVLILWRSCASRAFCLSPSS*ATRLRF Trigger: AAACCTCAAGCGTGTGGCCAATGAGCTGGGGGAAAG...ACAGAATGCTCTGGAGGCACATGATCTCCAAAGAATTAGGACCTGTGCCACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | CCAGTGTGGGTCCTCTGCAGTAGCTCTCTTAACCACTGGGCTATCCCTCTGACAACAGCCAAGAAGTCATaGAAGCTGATCTTTCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: PVWVLCSSSLNHWAIPLTTAKKS*KLIFPV Trigger: CACAGGAAAGATCAGCTTCAATGACTTCTTGGCTGT...TGTCAGAGGGATAGCCCAGTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | GGAAACCAGAAGAGGACATCAGACCCCATGGGGCTTCGTGGGTTTCATGCAGTTACAGCCAAGAAGTCATaGAAGCTGATCTTTCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GNQKRTSDPMGLRGFHAVTAKKS*KLIFPV Trigger: CACAGGAAAGATCAGCTTCAATGACTTCTTGGCTGT...AACTGCATGAAACCCACGAAGCCCCATGGGGTCTGATGTCCTCTTCTGGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | CATGCAGTTATAAGCTGTCCAGTGTGGGTCCTCTGCAGTAGCTCTCTTAACCACCCGAACTTCTTGCTTTaGATCTTCGGTGAGTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: HAVISCPVWVLCSSSLNHPNFLL*IFGEFR Trigger: CCTGAACTCACCGAAGATCAAAAGCAAGAAGTTCGG...GTGGTTAAGAGAGCTACTGCAGAGGACCCACACTGGACAGCTTATAACTGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | CCTCTTGTCTTTTTCTCATGGAACCCAGTGGCACAGGTCCTAATTCTTTGGAGACCGAACTTCTTGCTTTaGATCTTCGGTGAGTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PLVFFSWNPVAQVLILWRPNFLL*IFGEFR Trigger: CCTGAACTCACCGAAGATCAAAAGCAAGAAGTTCGG...TCTCCAAAGAATTAGGACCTGTGCCACTGGGTTCCATGAGAAAAAGACAAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | AGCTCTCTTAACCACTGGGCTATCCCTCTGACACCTGAGGAGTCTTCCTGGAACACACGCTTGAGGTTTTaGAATGAAATTTTCCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: SSLNHWAIPLTPEESSWNTRLRF*NEIFPV Trigger: AACTGGGAAAATTTCATTCAAAAACCTCAAGCGTGT...GTTCCAGGAAGACTCCTCAGGTGTCAGAGGGATAGCCCAGTGGTTAAGAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | GCAGGAAGAAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAACCGAACTTCTTGCTTTaGATCTTCGGTGAGTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: AGRRNRPQLFCHTFTKAEPNFLL*IFGEFR Trigger: CCTGAACTCACCGAAGATCAAAAGCAAGAAGTTCGG...TTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTTCTTCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | AAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAAGCAGGGACACAGCCAAGAAGTCATaGAAGCTGATCTTTCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: KEQTTAVLSYFHKSRSRDTAKKS*KLIFPV Trigger: CACAGGAAAGATCAGCTTCAATGACTTCTTGGCTGT...GTCCCTGCTTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | AGTGGCACAGGTCCTAATTCTTTGGAGATCATGTGCCTCCAGAGCATTCTGTTTTTTCCTGTGGCCTCTTaGTCTACTTCTGAAATCATT | + |
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Preference number: 5 (lower is better) Translates to: SGTGPNSLEIMCLQSILFFPVAS*STSEII Trigger: AATGATTTCAGAAGTAGACAAAGAGGCCACAGGAAA...AAACAGAATGCTCTGGAGGCACATGATCTCCAAAGAATTAGGACCTGTGCCACT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | GAAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAAGCAGGGATCATTGGCCACACGCTaGAGGTTTTTGAATGAAATT | + |
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Preference number: 5 (lower is better) Translates to: EGTDHSCSVILSQKQKQGSLATR*RFLNEI Trigger: AATTTCATTCAAAAACCTCAAGCGTGTGGCCAATGA...TCCCTGCTTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | AGTGGCACAGGTCCTAATTCTTTGGAGATCATGTGCCTCCAGAGCATTCTGTTTTCATTGGCCACACGCTaGAGGTTTTTGAATGAAATT | + |
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Preference number: 5 (lower is better) Translates to: SGTGPNSLEIMCLQSILFSLATR*RFLNEI Trigger: AATTTCATTCAAAAACCTCAAGCGTGTGGCCAATGA...AAACAGAATGCTCTGGAGGCACATGATCTCCAAAGAATTAGGACCTGTGCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062769.7 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | TTATTTAGAATCACTAAAGTGACCAGAGAACCACGATTTTATTTGACCGAGGAACTTTCCCCCAGCTCATaGGCCACACGCTTGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LFRITKVTREPRFYLTEELSPSS*ATRLRF Trigger: AAACCTCAAGCGTGTGGCCAATGAGCTGGGGGAAAG...TTCCTCGGTCAAATAAAATCGTGGTTCTCTGGTCACTTTAGTGATTCTAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAGAAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAAGTTTCCTGTGGCCTCTTaGTCTACTTCTGAAATCATT | + |
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Preference number: 5 (lower is better) Translates to: QEEGTDHSCSVILSQKQKFPVAS*STSEII Trigger: AATGATTTCAGAAGTAGACAAAGAGGCCACAGGAAA...CTTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTTCTTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | AAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAAGCAGGGACACACGCTTGAGGTTTTaGAATGAAATTTTCCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: KEQTTAVLSYFHKSRSRDTRLRF*NEIFPV Trigger: AACTGGGAAAATTTCATTCAAAAACCTCAAGCGTGT...GTCCCTGCTTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | GAAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAAGCAGGGAACACGCTTGAGGTTTTaGAATGAAATTTTCCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: EGTDHSCSVILSQKQKQGTRLRF*NEIFPV Trigger: AACTGGGAAAATTTCATTCAAAAACCTCAAGCGTGT...TCCCTGCTTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS-3UTR CAA 90 bp | GCAGGAAGAAGGAACAGACCACAGCTGTTCTGTCATACTTTCACAAAAGCAGAATCATTGGCCACACGCTaGAGGTTTTTGAATGAAATT | + |
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Preference number: 5 (lower is better) Translates to: AGRRNRPQLFCHTFTKAESLATR*RFLNEI Trigger: AATTTCATTCAAAAACCTCAAGCGTGTGGCCAATGA...TTCTGCTTTTGTGAAAGTATGACAGAACAGCTGTGGTCTGTTCCTTCTTCCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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| CDS CCA 72 bp | GTGCTCTCATGGCCACCTTCAGCTCCTTCACATCGATaGTCCCGCTCCCATCAGAATCGAAGAGGTCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: VLSWPPSAPSHR*SRSHQNRRGQR Trigger: CCTTTGACCTCTTCGATTCTGATGGGAGCGGGACCATCGATGTGAAGGAGCTGAAGGTGGCCATGAGAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062769.7 ENSMUST00000234003.2 ENSMUST00000234590.2 |
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