Pregenerated sensors for CES5A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058019Ensembl transcript IDs: ENSMUST00000077816.7, ENSMUST00000212009.2, ENSMUST00000212722.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTCATCCCTAAGCCCATAAAACACCAGCTAAAGCAGATTAGCGCACAGAAATCCAACAGGGATAATGGCTaGGGGAGAAACTTCGACAGA | + |
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Preference number: 2 (lower is better) Translates to: FIPKPIKHQLKQISAQKSNRDNG*GRNFDR Trigger: TCTGTCGAAGTTTCTCCCTCAGCCATTATCCCTGTT...GGATTTCTGTGCGCTAATCTGCTTTAGCTGGTGTTTTATGGGCTTAGGGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| 3UTR TCA 72 bp | CAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCTaGGGGAGAAACTTCGACAGAAGAAAATCAGAACCA | + |
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Preference number: 3 (lower is better) Translates to: QESSSAGNRDNG*GRNFDRRKSEP Trigger: TGGTTCTGATTTTCTTCTGTCGAAGTTTCTCCCTCAGCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CCA 90 bp | TTAGCGCACAGAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCGTCTTCCCAGCACGGTaGCTTGCTTCCCCTGCACCC | + |
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Preference number: 4 (lower is better) Translates to: LAHRNPQESSSAGNRDNGVFPAR*LASPAP Trigger: GGGTGCAGGGGAAGCAAGCCACCGTGCTGGGAAGAC...GCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTCTGTGCGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR TCA 90 bp | TTAGCGCACAGAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCTGGCTTCCTCAAACATaGCCACGTCGCCCTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LAHRNPQESSSAGNRDNGWLPQT*PRRPSG Trigger: TCCTGAAGGGCGACGTGGTCATGTTTGAGGAAGCCA...GCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTCTGTGCGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR TCA 90 bp | CCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCTGAGGGAGAAACTTCGCGTCGACCACTCGAGTaGATGATTTTGCTTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PRKAAQLGTGIMAEGETSRRPLE*MILLSG Trigger: GCCAGAAAGCAAAATCATTCACTCGAGTGGTCGACG...CGAAGTTTCTCCCTCAGCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CCA 90 bp | TTAGCGCACAGAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCTTCCCAGGGGCATGCTaGTTCTGTGTGGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAHRNPQESSSAGNRDNGFPGAC*FCVVKK Trigger: CTTCTTCACCACACAGAACCAGCATGCCCCTGGGAA...GCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTCTGTGCGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CCA 90 bp | AGATTAGCGCACAGAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATAGCAAGGCAGCCAGCTaGTCCCAGAAGGCCCAATTC | + |
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Preference number: 4 (lower is better) Translates to: RLAHRNPQESSSAGNRDNSKAAS*SQKAQF Trigger: GAATTGGGCCTTCTGGGACCAGCTGGCTGCCTTGCT...ATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTCTGTGCGCTAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR TCA 90 bp | AGATTAGCGCACAGAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATCACGAAGGCTGGCCTTaGGTTTTGAAAGCAATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLAHRNPQESSSAGNRDNHEGWP*VLKAMG Trigger: CCCCATTGCTTTCAAAACTCAAGGCCAGCCTTCGTG...ATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTCTGTGCGCTAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CCA 90 bp | TTCATCCCTAAGCCCATAAAACACCAGCTAAAGCAGATTAGCGCACAGAAATCCGGGGATCGGAGGCTGTaGCTTGGAAAACCGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: FIPKPIKHQLKQISAQKSGDRRL*LGKPQR Trigger: CCTCTGCGGTTTTCCAAGCCACAGCCTCCGATCCCC...GGATTTCTGTGCGCTAATCTGCTTTAGCTGGTGTTTTATGGGCTTAGGGATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CCA 90 bp | AGATTAGCGCACAGAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATCAAAACTCCACCCTCTaGTCTTTCAGTCTCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RLAHRNPQESSSAGNRDNQNSTL*SFSLRP Trigger: TGGGCGGAGACTGAAAGACCAGAGGGTGGAGTTTTG...ATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTCTGTGCGCTAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR TCA 90 bp | GAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCTGAGGGAGAAGCTGGTTCTGTGTGGTaGAGAAGCCAAATATTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: EIPRKAAQLGTGIMAEGEAGSVW*RSQIFL Trigger: TAGGAATATTTGGCTTCTTCACCACACAGAACCAGC...TTCTCCCTCAGCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR GCA 90 bp | AATTTTATGAGGTTCATCCCTAAGCCCATAAAACACCAGCTAAAGCAGATTAGCCCCAGCACGGTGGCTTaGTTCCCCTGCACCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: NFMRFIPKPIKHQLKQISPSTVA*FPCTHP Trigger: GGGATGGGTGCAGGGGAAGCAAGCCACCGTGCTGGG...GCTAATCTGCTTTAGCTGGTGTTTTATGGGCTTAGGGATGAACCTCATAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR GCA 90 bp | AGATTAGCGCACAGAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATATGGCCACTCCACTCTaGATGATGGCTCTGTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: RLAHRNPQESSSAGNRDNMATPL*MMALWN Trigger: ATTCCACAGAGCCATCATGCAGAGTGGAGTGGCCAT...ATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTCTGTGCGCTAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR GCA 90 bp | GAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCTGAGGGAGAATGCTGGGTGGGGATATaGAGCAAAGTATGTATCAAG | + |
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Preference number: 4 (lower is better) Translates to: EIPRKAAQLGTGIMAEGECWVGI*SKVCIK Trigger: CTTGATACATACTTTGCTGCATATCCCCACCCAGCA...TTCTCCCTCAGCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CCA 90 bp | GAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCTGAGGGAGAATCTGAAAGCACAAATTaGGATAGGCAGTGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: EIPRKAAQLGTGIMAEGESESTN*DRQWLL Trigger: GAGAAGCCACTGCCTATCCCAATTTGTGCTTTCAGA...TTCTCCCTCAGCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCTGAGGGAGAAACTTCGGTTATTGGCATGGCATaGTGCATAAATGTTGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: PRKAAQLGTGIMAEGETSVIGMA*CINVEV Trigger: TACCTCAACATTTATGCACCATGCCATGCCAATAAC...CGAAGTTTCTCCCTCAGCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CCA 90 bp | TTAGCGCACAGAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCGGAGAATGCTTGCCATaGAAGTACTCTTTAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: LAHRNPQESSSAGNRDNGGECLP*KYSLVT Trigger: TGTGACTAAAGAGTACTTCCATGGCAAGCATTCTCC...GCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTCTGTGCGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR TCA 90 bp | GGAACAGGGATAATGGCTGAGGGAGAAACTTCGACAGAAGAAAATCAGAACCAAGCTGGCCTTGAGTTTTaGAAGCAATGGGGTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GTGIMAEGETSTEENQNQAGLEF*KQWGLC Trigger: GCACAGACCCCATTGCTTTCAAAACTCAAGGCCAGC...TTGGTTCTGATTTTCTTCTGTCGAAGTTTCTCCCTCAGCCATTATCCCTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CCA 90 bp | TTAGCGCACAGAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCACTTCAGCAAAGCCTTaGAGTCTGATACATTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: LAHRNPQESSSAGNRDNGTSAKP*SLIHCN Trigger: ATTGCAATGTATCAGACTCCAAGGCTTTGCTGAAGT...GCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTCTGTGCGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR GCA 90 bp | TTAGCGCACAGAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCACATTTGCAACCACCTaGAAATCATGTTTCAGATCA | + |
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Preference number: 4 (lower is better) Translates to: LAHRNPQESSSAGNRDNGTFATT*KSCFRS Trigger: TGATCTGAAACATGATTTGCAGGTGGTTGCAAATGT...GCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTCTGTGCGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR GCA 90 bp | ACAGAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCTGAGGGATGGAGTCTGATACATTaGAATCACAAACATTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: TEIPRKAAQLGTGIMAEGWSLIH*NHKHLQ Trigger: TTGCAAATGTTTGTGATTGCAATGTATCAGACTCCA...TCCCTCAGCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CCA 90 bp | AATTTTATGAGGTTCATCCCTAAGCCCATAAAACACCAGCTAAAGCAGATTAGCTCGGAGGCTGTGGCTTaGAAAACCGCAGAGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: NFMRFIPKPIKHQLKQISSEAVA*KTAEVQ Trigger: TTGGACCTCTGCGGTTTTCCAAGCCACAGCCTCCGA...GCTAATCTGCTTTAGCTGGTGTTTTATGGGCTTAGGGATGAACCTCATAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CCA 90 bp | AATTTTATGAGGTTCATCCCTAAGCCCATAAAACACCAGCTAAAGCAGATTAGCGCACCCATCCCAGCTTaGTGTACCTATGTGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NFMRFIPKPIKHQLKQISAPIPA*CTYVAL Trigger: AAGAGCCACATAGGTACACCAAGCTGGGATGGGTGC...GCTAATCTGCTTTAGCTGGTGTTTTATGGGCTTAGGGATGAACCTCATAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR TCA 90 bp | ATGGCTGAGGGAGAAACTTCGACAGAAGAAAATCAGAACCAAATACTGATGACTGACCACTCGAGTGAATaGTTTTGCTTTCTGGCTAAG | + |
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Preference number: 4 (lower is better) Translates to: MAEGETSTEENQNQILMTDHSSE*FCFLAK Trigger: CTTAGCCAGAAAGCAAAATCATTCACTCGAGTGGTC...AGTCATCAGTATTTGGTTCTGATTTTCTTCTGTCGAAGTTTCTCCCTCAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR GCA 90 bp | GGAACAGGGATAATGGCTGAGGGAGAAACTTCGACAGAAGAAAATCAGAACCAAGCAATCACAAACATTTaGAACCACCTGCAAATCATG | + |
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Preference number: 4 (lower is better) Translates to: GTGIMAEGETSTEENQNQAITNI*NHLQIM Trigger: CATGATTTGCAGGTGGTTGCAAATGTTTGTGATTGC...TTGGTTCTGATTTTCTTCTGTCGAAGTTTCTCCCTCAGCCATTATCCCTGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CCA 90 bp | AATTTTATGAGGTTCATCCCTAAGCCCATAAAACACCAGCTAAAGCAGATTAGCAATTGGGATAGGCAGTaGCTTCTCGCAAATTATCCC | + |
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Preference number: 4 (lower is better) Translates to: NFMRFIPKPIKHQLKQISNWDRQ*LLANYP Trigger: GGGATAATTTGCGAGAAGCCACTGCCTATCCCAATT...GCTAATCTGCTTTAGCTGGTGTTTTATGGGCTTAGGGATGAACCTCATAAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS CCA 90 bp | GTCTTCCCAGCACGGTGGCTTGCTTCCCCTGCACCCATCCCAGCTTaGTGTACCTATGTGGCTCTTCAGTCACAGACCCTGCCATTGCAC | + |
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Preference number: 5 (lower is better) Translates to: VFPARWLASPAPIPA*CTYVALQSQTLPLH Trigger: GTGCAATGGCAGGGTCTGTGACTGAAGAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAGCAAGCCACCGTGCTGGGAAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212722.2 |
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| CDS GCA 90 bp | CCAAGAAACACGTTCACGGGTTCCAGTCTTCCCAGCACGGTGGCTTaGTTCCCCTGCACCCATCCCAGCTTGGTGTACCTATGTGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: PRNTFTGSSLPSTVA*FPCTHPSLVYLCGS Trigger: AGAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAGCAAGCCACCGTGCTGGGAAGACTGGAACCCGTGAACGTGTTTCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 ENSMUST00000212722.2 |
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| CDS CCA 90 bp | GGATCCCAAGAAACACGTTCACGGGTTCCAGTCTTCCCAGCACGGTaGCTTGCTTCCCCTGCACCCATCCCAGCTTGGTGTACCTATGTG | + |
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Preference number: 5 (lower is better) Translates to: GSQETRSRVPVFPAR*LASPAPIPAWCTYV Trigger: CACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAGCAAGCCACCGTGCTGGGAAGACTGGAACCCGTGAACGTGTTTCTTGGGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 ENSMUST00000212722.2 |
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| CDS TCA 90 bp | GGACAGGCGACAGTAGTGATAGGAGGATTAAGGAGAACGTGGGACTaGGCAGCGCTTTGGAAGCAGACAGGATCAGGGGGAGGGTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: GQATVVIGGLRRTWD*AALWKQTGSGGGCL Trigger: CAGACACCCTCCCCCTGATCCTGTCTGCTTCCAAAGCGCTGCTCAGTCCCACGTTCTCCTTAATCCTCCTATCACTACTGTCGCCTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CCA 90 bp | GATGTTCACATCCAGTTCCAGGTACTGTTCATTCTCATCATAGACTaGCCACGGAGGCAGGTCGGCACCGTTAGGATCCCCGCTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: DVHIQFQVLFILIID*PRRQVGTVRIPAPG Trigger: GCCAGGAGCGGGGATCCTAACGGTGCCGACCTGCCTCCGTGGCCAGTCTATGATGAGAATGAACAGTACCTGGAACTGGATGTGAACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS-3UTR CAA 90 bp | GAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCTGAGGGAGAAGGACTGAGCAGCGCTTaGGAAGCAGACAGGATCAGG | + |
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Preference number: 5 (lower is better) Translates to: EIPRKAAQLGTGIMAEGEGLSSA*EADRIR Trigger: CCTGATCCTGTCTGCTTCCAAAGCGCTGCTCAGTCC...TTCTCCCTCAGCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CAA 90 bp | GAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCTGAGGGAGAATCACGAAGGCTGGCCTaGAGTTTTGAAAGCAATGGG | + |
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Preference number: 5 (lower is better) Translates to: EIPRKAAQLGTGIMAEGESRRLA*SFESNG Trigger: CCCATTGCTTTCAAAACTCAAGGCCAGCCTTCGTGA...TTCTCCCTCAGCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS TCA 90 bp | CTGTCCAAAACTCCACCCTCTGGTCTTTCAGTCTCCGCCCAGTGCTaGTGTTCACATCCAGTTCCAGGTACTGTTCATTCTCATCATAGA | + |
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Preference number: 5 (lower is better) Translates to: LSKTPPSGLSVSAQC*CSHPVPGTVHSHHR Trigger: TCTATGATGAGAATGAACAGTACCTGGAACTGGATGTGAACATCAGCACTGGGCGGAGACTGAAAGACCAGAGGGTGGAGTTTTGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS-3UTR CAA 90 bp | CCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATGGCTGAGGGAGAAACTTCGTTGGAGTCTGATACATaGCAATCACAAACATTTGCA | + |
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Preference number: 5 (lower is better) Translates to: PRKAAQLGTGIMAEGETSLESDT*QSQTFA Trigger: TGCAAATGTTTGTGATTGCAATGTATCAGACTCCAA...CGAAGTTTCTCCCTCAGCCATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS-3UTR CAA 90 bp | AGATTAGCGCACAGAAATCCCCAGGAAAGCAGCTCAGCTGGGAACAGGGATAATCACTTCAGCAAAGCCTaGGAGTCTGATACATTGCAA | + |
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Preference number: 5 (lower is better) Translates to: RLAHRNPQESSSAGNRDNHFSKA*ESDTLQ Trigger: TTGCAATGTATCAGACTCCAAGGCTTTGCTGAAGTG...ATTATCCCTGTTCCCAGCTGAGCTGCTTTCCTGGGGATTTCTGTGCGCTAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS CCA 90 bp | AAGTCCAGTAAAGTGTCTCGGATGTCGGTCGGAGAATGCTTGCCATaGAAGTACTCTTTAGTCACAATGTACAAATGCTGGGTGGGGATA | + |
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Preference number: 5 (lower is better) Translates to: KSSKVSRMSVGECLP*KYSLVTMYKCWVGI Trigger: TATCCCCACCCAGCATTTGTACATTGTGACTAAAGAGTACTTCCATGGCAAGCATTCTCCGACCGACATCCGAGACACTTTACTGGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS-3UTR CAA 90 bp | GGAACAGGGATAATGGCTGAGGGAGAAACTTCGACAGAAGAAAATCAGAACCAATTTCCACCGAAGTACTaGATGTTCTCCCTGACCCAC | + |
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Preference number: 5 (lower is better) Translates to: GTGIMAEGETSTEENQNQFPPKY*MFSLTH Trigger: GTGGGTCAGGGAGAACATCAAGTACTTCGGTGGAAA...TTGGTTCTGATTTTCTTCTGTCGAAGTTTCTCCCTCAGCCATTATCCCTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS GCA 90 bp | TCTCCAAACAAGTCCAGTAAAGTGTCTCGGATGTCGGTCGGAGAATaGTTGCCATGGAAGTACTCTTTAGTCACAATGTACAAATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SPNKSSKVSRMSVGE*LPWKYSLVTMYKCW Trigger: CCAGCATTTGTACATTGTGACTAAAGAGTACTTCCATGGCAAGCATTCTCCGACCGACATCCGAGACACTTTACTGGACTTGTTTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS GCA 90 bp | GCCTTGGAGTCTGATACATTGCAATCACAAACATTTGCAACCACCTaGAAATCATGTTTCAGATCATTATCAGAGCTCTTCAGGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: ALESDTLQSQTFATT*KSCFRSLSELFRLG Trigger: CCCCAGCCTGAAGAGCTCTGATAATGATCTGAAACATGATTTGCAGGTGGTTGCAAATGTTTGTGATTGCAATGTATCAGACTCCAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CCA 90 bp | TCAACTCCAAAGAAGACTTTTCCCTCAGGCACTTCAGCAAAGCCTTaGAGTCTGATACATTGCAATCACAAACATTTGCAACCACCTGCA | + |
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Preference number: 5 (lower is better) Translates to: STPKKTFPSGTSAKP*SLIHCNHKHLQPPA Trigger: TGCAGGTGGTTGCAAATGTTTGTGATTGCAATGTATCAGACTCCAAGGCTTTGCTGAAGTGCCTGAGGGAAAAGTCTTCTTTGGAGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS TCA 90 bp | CAAAGAAGACTTTTCCCTCAGGCACTTCAGCAAAGCCTTGGAGTCTaGTACATTGCAATCACAAACATTTGCAACCACCTGCAAATCATG | + |
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Preference number: 5 (lower is better) Translates to: QRRLFPQALQQSLGV*YIAITNICNHLQIM Trigger: CATGATTTGCAGGTGGTTGCAAATGTTTGTGATTGCAATGTATCAGACTCCAAGGCTTTGCTGAAGTGCCTGAGGGAAAAGTCTTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS GCA 90 bp | TGGAAGTACTCTTTAGTCACAATGTACAAATGCTGGGTGGGGATATaGAGCAAAGTATGTATCAAGGTGAGAGCAGTAGACTCATTGGAG | + |
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Preference number: 5 (lower is better) Translates to: WKYSLVTMYKCWVGI*SKVCIKVRAVDSLE Trigger: CTCCAATGAGTCTACTGCTCTCACCTTGATACATACTTTGCTGCATATCCCCACCCAGCATTTGTACATTGTGACTAAAGAGTACTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CCA 90 bp | GAATGCTTGCCATGGAAGTACTCTTTAGTCACAATGTACAAATGCTaGGTGGGGATATGCAGCAAAGTATGTATCAAGGTGAGAGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: ECLPWKYSLVTMYKC*VGICSKVCIKVRAV Trigger: TACTGCTCTCACCTTGATACATACTTTGCTGCATATCCCCACCCAGCATTTGTACATTGTGACTAAAGAGTACTTCCATGGCAAGCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS GCA 90 bp | ACTTTTCCCTCAGGCACTTCAGCAAAGCCTTGGAGTCTGATACATTaGAATCACAAACATTTGCAACCACCTGCAAATCATGTTTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: TFPSGTSAKPWSLIH*NHKHLQPPANHVSD Trigger: ATCTGAAACATGATTTGCAGGTGGTTGCAAATGTTTGTGATTGCAATGTATCAGACTCCAAGGCTTTGCTGAAGTGCCTGAGGGAAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CCA 72 bp | GCACGGTGGCTTGCTTCCCCTGCACCCATCCCAGCTTaGTGTACCTATGTGGCTCTTCAGTCACAGACCCTG | + |
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Preference number: 6 (lower is better) Translates to: ARWLASPAPIPA*CTYVALQSQTL Trigger: CAGGGTCTGTGACTGAAGAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAGCAAGCCACCGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212722.2 |
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| CDS CCA 72 bp | GCACGGTGGCTTGCTTCCCCTGCACCCATCCCAGCTTaGTGTACCTATGTGGCTCTTCAGTCACAGACCCCT | + |
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Preference number: 6 (lower is better) Translates to: ARWLASPAPIPA*CTYVALQSQTP Trigger: AGGGGTCTGTGACTGAAGAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAGCAAGCCACCGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS CAA 90 bp | CCCAAGAAACACGTTCACGGGTTCCAGTCTTCCCAGCACGGTGGCTaGCTTCCCCTGCACCCATCCCAGCTTGGTGTACCTATGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: PKKHVHGFQSSQHGG*LPLHPSQLGVPMWL Trigger: GAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAGCAAGCCACCGTGCTGGGAAGACTGGAACCCGTGAACGTGTTTCTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 ENSMUST00000212722.2 |
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| CDS CAA 90 bp | AGTCTTCCCAGCACGGTGGCTTGCTTCCCCTGCACCCATCCCAGCTaGGTGTACCTATGTGGCTCTTCAGTCACAGACCCTGCCATTGCA | + |
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Preference number: 6 (lower is better) Translates to: SLPSTVACFPCTHPS*VYLCGSSVTDPAIA Trigger: TGCAATGGCAGGGTCTGTGACTGAAGAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAGCAAGCCACCGTGCTGGGAAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212722.2 |
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| CDS CAA 90 bp | AGTCTTCCCAGCACGGTGGCTTGCTTCCCCTGCACCCATCCCAGCTaGGTGTACCTATGTGGCTCTTCAGTCACAGACCCCTCGATGATG | + |
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Preference number: 6 (lower is better) Translates to: SLPSTVACFPCTHPS*VYLCGSSVTDPSMM Trigger: CATCATCGAGGGGTCTGTGACTGAAGAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAGCAAGCCACCGTGCTGGGAAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS CCA 72 bp | GCACGGTGGCTTGCTTCCCCTGCACCCATCCCAGCTTaGTGTACCTATGTGGCTCTTCAGTCACAGAACCCT | + |
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Preference number: 6 (lower is better) Translates to: ARWLASPAPIPA*CTYVALQSQNP Trigger: AGGGTTCTGTGACTGAAGAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAGCAAGCCACCGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077816.7 |
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| CDS CCA 72 bp | CTTCCCCTGCACCCATCCCAGCTTGGTGTACCTATGTaGCTCTTCAGTCACAGACCCTGCCATTGCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: LPLHPSQLGVPM*LFSHRPCHCTL Trigger: GAGGGTGCAATGGCAGGGTCTGTGACTGAAGAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212722.2 |
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| CDS CCA 72 bp | CTTCCCCTGCACCCATCCCAGCTTGGTGTACCTATGTaGCTCTTCAGTCACAGACCCCTCGATGATGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LPLHPSQLGVPM*LFSHRPLDDGS Trigger: GGAGCCATCATCGAGGGGTCTGTGACTGAAGAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212009.2 |
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| CDS CAA 90 bp | AGTCTTCCCAGCACGGTGGCTTGCTTCCCCTGCACCCATCCCAGCTaGGTGTACCTATGTGGCTCTTCAGTCACAGAACCCTCGATGATG | + |
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Preference number: 6 (lower is better) Translates to: SLPSTVACFPCTHPS*VYLCGSSVTEPSMM Trigger: CATCATCGAGGGTTCTGTGACTGAAGAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAGCAAGCCACCGTGCTGGGAAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077816.7 |
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| CDS CCA 72 bp | CTTCCCCTGCACCCATCCCAGCTTGGTGTACCTATGTaGCTCTTCAGTCACAGAACCCTCGATGATGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LPLHPSQLGVPM*LFSHRTLDDGS Trigger: GGAGCCATCATCGAGGGTTCTGTGACTGAAGAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077816.7 |
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| CDS CCA 72 bp | ATCCAGTTCCAGGTACTGTTCATTCTCATCATAGACTaGCCACGGAGGCAGGTCGGCACCGTTAGGATCCCC | + |
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Preference number: 6 (lower is better) Translates to: IQFQVLFILIID*PRRQVGTVRIP Trigger: GGGGATCCTAACGGTGCCGACCTGCCTCCGTGGCCAGTCTATGATGAGAATGAACAGTACCTGGAACTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CCA 72 bp | ATCAGGGGGAGGGTGTCTGTCCAAAACTCCACCCTCTaGTCTTTCAGTCTCCGCCCAGTGCTGATGTTCACA | + |
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Preference number: 6 (lower is better) Translates to: IRGRVSVQNSTL*SFSLRPVLMFT Trigger: TGTGAACATCAGCACTGGGCGGAGACTGAAAGACCAGAGGGTGGAGTTTTGGACAGACACCCTCCCCCTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CCA 72 bp | AGCTGGTCCCAGAAGGCCCAATTCCCAGGGGCATGCTaGTTCTGTGTGGTGAAGAAGCCAAATATTCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SWSQKAQFPGAC*FCVVKKPNIPR Trigger: CCTAGGAATATTTGGCTTCTTCACCACACAGAACCAGCATGCCCCTGGGAATTGGGCCTTCTGGGACCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 ENSMUST00000212722.2 |
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| CDS TCA 72 bp | ACAGTAGTGATAGGAGGATTAAGGAGAACGTGGGACTaGGCAGCGCTTTGGAAGCAGACAGGATCAGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: TVVIGGLRRTWD*AALWKQTGSGG Trigger: TCCCCCTGATCCTGTCTGCTTCCAAAGCGCTGCTCAGTCCCACGTTCTCCTTAATCCTCCTATCACTACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS TCA 72 bp | TTAGCAACTTCTCTTCCTCGGTGGCTTCCTCAAACATaGCCACGTCGCCCTTCAGGAAAGGGCCTCCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: LATSLPRWLPQT*PRRPSGKGLQK Trigger: TTTTTGGAGGCCCTTTCCTGAAGGGCGACGTGGTCATGTTTGAGGAAGCCACCGAGGAAGAGAAGTTGCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS TCA 72 bp | ACTCCACCCTCTGGTCTTTCAGTCTCCGCCCAGTGCTaGTGTTCACATCCAGTTCCAGGTACTGTTCATTCT | + |
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Preference number: 6 (lower is better) Translates to: TPPSGLSVSAQC*CSHPVPGTVHS Trigger: AGAATGAACAGTACCTGGAACTGGATGTGAACATCAGCACTGGGCGGAGACTGAAAGACCAGAGGGTGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS GCA 72 bp | GTACCTATGTGGCTCTTCAGTCACAGACCCTGCCATTaGACCCTCGATGATGGCTCCAAAGATCCAAATAAC | + |
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Preference number: 6 (lower is better) Translates to: VPMWLFSHRPCH*TLDDGSKDPNN Trigger: GTTATTTGGATCTTTGGAGCCATCATCGAGGGTGCAATGGCAGGGTCTGTGACTGAAGAGCCACATAGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212722.2 |
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| CDS CCA 72 bp | ACTCTAAGTTCTGAAAGCACAAATTGGGATAGGCAGTaGCTTCTCGCAAATTATCCCAGGGGATCGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: TLSSESTNWDRQ*LLANYPRGSEA Trigger: AGCCTCCGATCCCCTGGGATAATTTGCGAGAAGCCACTGCCTATCCCAATTTGTGCTTTCAGAACTTAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 ENSMUST00000212722.2 |
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| CDS CAA 72 bp | AGCAAAGTATGTATCAAGGTGAGAGCAGTAGACTCATaGGAGCCGAGGAGAATCTCAGGAGTGTCTCTCACG | + |
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Preference number: 6 (lower is better) Translates to: SKVCIKVRAVDS*EPRRISGVSLT Trigger: CGTGAGAGACACTCCTGAGATTCTCCTCGGCTCCAATGAGTCTACTGCTCTCACCTTGATACATACTTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CAA 90 bp | CCAAACAAGTCCAGTAAAGTGTCTCGGATGTCGGTCGGAGAATGCTaGCCATGGAAGTACTCTTTAGTCACAATGTACAAATGCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PNKSSKVSRMSVGEC*PWKYSLVTMYKCWV Trigger: CACCCAGCATTTGTACATTGTGACTAAAGAGTACTTCCATGGCAAGCATTCTCCGACCGACATCCGAGACACTTTACTGGACTTGTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS TCA 72 bp | TTCGGAGAAGAAAGAACCGTCGACCACTCGAGTGAATaGTTTTGCTTTCTGGCTAAGGCTCATCAACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: FGEERTVDHSSE*FCFLAKAHQLQ Trigger: TTGGAGTTGATGAGCCTTAGCCAGAAAGCAAAATCATTCACTCGAGTGGTCGACGGTTCTTTCTTCTCCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CCA 72 bp | AAAGTGTCTCGGATGTCGGTCGGAGAATGCTTGCCATaGAAGTACTCTTTAGTCACAATGTACAAATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: KVSRMSVGECLP*KYSLVTMYKCW Trigger: CCAGCATTTGTACATTGTGACTAAAGAGTACTTCCATGGCAAGCATTCTCCGACCGACATCCGAGACACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CAA 90 bp | ATCAACTCCAAAGAAGACTTTTCCCTCAGGCACTTCAGCAAAGCCTaGGAGTCTGATACATTGCAATCACAAACATTTGCAACCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: INSKEDFSLRHFSKA*ESDTLQSQTFATTC Trigger: GCAGGTGGTTGCAAATGTTTGTGATTGCAATGTATCAGACTCCAAGGCTTTGCTGAAGTGCCTGAGGGAAAAGTCTTCTTTGGAGTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CAA 90 bp | GACTTTTCCCTCAGGCACTTCAGCAAAGCCTTGGAGTCTGATACATaGCAATCACAAACATTTGCAACCACCTGCAAATCATGTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: DFSLRHFSKALESDT*QSQTFATTCKSCFR Trigger: TCTGAAACATGATTTGCAGGTGGTTGCAAATGTTTGTGATTGCAATGTATCAGACTCCAAGGCTTTGCTGAAGTGCCTGAGGGAAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS GCA 72 bp | TCAGGCACTTCAGCAAAGCCTTGGAGTCTGATACATTaGAATCACAAACATTTGCAACCACCTGCAAATCAT | + |
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Preference number: 6 (lower is better) Translates to: SGTSAKPWSLIH*NHKHLQPPANH Trigger: ATGATTTGCAGGTGGTTGCAAATGTTTGTGATTGCAATGTATCAGACTCCAAGGCTTTGCTGAAGTGCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS GCA 72 bp | TCTTTAGTCACAATGTACAAATGCTGGGTGGGGATATaGAGCAAAGTATGTATCAAGGTGAGAGCAGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: SLVTMYKCWVGI*SKVCIKVRAVD Trigger: GTCTACTGCTCTCACCTTGATACATACTTTGCTGCATATCCCCACCCAGCATTTGTACATTGTGACTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CCA 72 bp | CCATGGAAGTACTCTTTAGTCACAATGTACAAATGCTaGGTGGGGATATGCAGCAAAGTATGTATCAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PWKYSLVTMYKC*VGICSKVCIKV Trigger: CACCTTGATACATACTTTGCTGCATATCCCCACCCAGCATTTGTACATTGTGACTAAAGAGTACTTCCATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS GCA 72 bp | TTGCCATGGAAGTACTCTTTAGTCACAATGTACAAATaGTGGGTGGGGATATGCAGCAAAGTATGTATCAAG | + |
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Preference number: 6 (lower is better) Translates to: LPWKYSLVTMYK*WVGICSKVCIK Trigger: CTTGATACATACTTTGCTGCATATCCCCACCCAGCATTTGTACATTGTGACTAAAGAGTACTTCCATGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CCA 72 bp | AAGAAGACTTTTCCCTCAGGCACTTCAGCAAAGCCTTaGAGTCTGATACATTGCAATCACAAACATTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: KKTFPSGTSAKP*SLIHCNHKHLQ Trigger: TTGCAAATGTTTGTGATTGCAATGTATCAGACTCCAAGGCTTTGCTGAAGTGCCTGAGGGAAAAGTCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CAA 72 bp | AAAGAAGACTTTTCCCTCAGGCACTTCAGCAAAGCCTaGGAGTCTGATACATTGCAATCACAAACATTTGCA | + |
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Preference number: 6 (lower is better) Translates to: KEDFSLRHFSKA*ESDTLQSQTFA Trigger: TGCAAATGTTTGTGATTGCAATGTATCAGACTCCAAGGCTTTGCTGAAGTGCCTGAGGGAAAAGTCTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CAA 90 bp | ACTTCAGCAAAGCCTTGGAGTCTGATACATTGCAATCACAAACATTaGCAACCACCTGCAAATCATGTTTCAGATCATTATCAGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: TSAKPWSLIHCNHKH*QPPANHVSDHYQSS Trigger: AGAGCTCTGATAATGATCTGAAACATGATTTGCAGGTGGTTGCAAATGTTTGTGATTGCAATGTATCAGACTCCAAGGCTTTGCTGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS CAA 72 bp | AAGCCTTGGAGTCTGATACATTGCAATCACAAACATTaGCAACCACCTGCAAATCATGTTTCAGATCATTAT | + |
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Preference number: 6 (lower is better) Translates to: KPWSLIHCNHKH*QPPANHVSDHY Trigger: ATAATGATCTGAAACATGATTTGCAGGTGGTTGCAAATGTTTGTGATTGCAATGTATCAGACTCCAAGGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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| CDS TCA 72 bp | ACTCCAATGATAGAAGGTACTATTTTCAATGTCTTTTaGGACAACAGTTCTAGTGGTTCTTCGGAGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: TPMIEGTIFNVF*DNSSSGSSEKK Trigger: TTTCTTCTCCGAAGAACCACTAGAACTGTTGTCTCAAAAGACATTGAAAATAGTACCTTCTATCATTGGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077816.7 ENSMUST00000212009.2 |
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