Pregenerated sensors for CES4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060560Ensembl transcript IDs: ENSMUST00000161289.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCTCCAATCTGAAGGCAGTCAGGAATATTTACATGTCCTAGATTaGGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: QLQSEGSQEYLHVLD*VKRTPVLRCIQGQS Trigger: AGACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACTCAATCTAGGACATGTAAATATTCCTGACTGCCTTCAGATTGGAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR TCA 90 bp | GTAGTACTAAGCCCCATACGATGGACTAGGGCTCCAGCTCCAATCTaGAGGCAGTCAGGAATATTTACATGTCCTAGATTGAGTCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: VVLSPIRWTRAPAPI*RQSGIFTCPRLSQE Trigger: CTCTTGACTCAATCTAGGACATGTAAATATTCCTGACTGCCTTCAGATTGGAGCTGGAGCCCTAGTCCATCGTATGGGGCTTAGTACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR-3UTR TCA 90 bp | CAATCTCTAGGTACAGGCTTTGGAAGCACCCCGGGGGAGGTGAGTGTGAGAAGAGGAAGTGGCAGTGTGTaGACTTTCCATAAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: QSLGTGFGSTPGEVSVRRGSGSV*TFHKRG Trigger: CCCTCTCTTATGGAAAGTTCACACACTGCCACTTCC...TCTTCTCACACTCACCTCCCCCGGGGTGCTTCCAAAGCCTGTACCTAGAGATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR-3UTR TCA 90 bp | AGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTGTCCACGGCAGGGTACAATaGCAGGAAGTGGCAGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: RIQIPSHQSFSPYHEWIVHGRVQ*QEVAVC Trigger: ACACACTGCCACTTCCTGTCATTGTACCCTGCCGTG...GACAATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR CAA 90 bp | TACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATaGTCTGGGGGCCTCAAGATCATCATAAGTAAGCAAGTTGAACAG | + |
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Preference number: 2 (lower is better) Translates to: YRSQAIKAFHHIMNG*SGGLKIIISKQVEQ Trigger: CTGTTCAACTTGCTTACTTATGATGATCTTGAGGCCCCCAGACAATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTGTCTACAATGACAGGAAGTaGCAGTGTGTGAACTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RIQIPSHQSFSPYHEWIVYNDRK*QCVNFP Trigger: TGGAAAGTTCACACACTGCCACTTCCTGTCATTGTA...GACAATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGTTATGGGACATCAGGCTAGACTGGTAGTACTAAGCCCCATACGATGGACTCCAGGGCCAGTCTCCTaGAGGCAGAATGGTAGCATA | + |
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Preference number: 3 (lower is better) Translates to: GVMGHQARLVVLSPIRWTPGPVS*RQNGSI Trigger: TATGCTACCATTCTGCCTCAAGGAGACTGGCCCTGG...AGTCCATCGTATGGGGCTTAGTACTACCAGTCTAGCCTGATGTCCCATAACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR TCA 72 bp | CCACGGCAGGGTACAATGACAGGAAGTGGCAGTGTGTaGACTTTCCATAAGAGAGGGCTGCAGATACATCAT | + |
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Preference number: 3 (lower is better) Translates to: PRQGTMTGSGSV*TFHKRGLQIHH Trigger: ATGATGTATCTGCAGCCCTCTCTTATGGAAAGTTCACACACTGCCACTTCCTGTCATTGTACCCTGCCGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR TCA 72 bp | AGCCCCATACGATGGACTAGGGCTCCAGCTCCAATCTaGAGGCAGTCAGGAATATTTACATGTCCTAGATTG | + |
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Preference number: 3 (lower is better) Translates to: SPIRWTRAPAPI*RQSGIFTCPRL Trigger: CAATCTAGGACATGTAAATATTCCTGACTGCCTTCAGATTGGAGCTGGAGCCCTAGTCCATCGTATGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR TCA 72 bp | TCTGAAGGCAGTCAGGAATATTTACATGTCCTAGATTaGGTCAAGAGGACTCCTGTCCTCAGATGTATCCAG | + |
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Preference number: 3 (lower is better) Translates to: SEGSQEYLHVLD*VKRTPVLRCIQ Trigger: CTGGATACATCTGAGGACAGGAGTCCTCTTGACTCAATCTAGGACATGTAAATATTCCTGACTGCCTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR TCA 72 bp | AAGATCATCATAAGTAAGCAAGTTGAACAGAGTAGATaGTCAACCACGGCAGGGTACAATGACAGGAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: KIIISKQVEQSR*STTAGYNDRKW Trigger: CCACTTCCTGTCATTGTACCCTGCCGTGGTTGATCATCTACTCTGTTCAACTTGCTTACTTATGATGATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR GCA 72 bp | GAAGTGGCAGTGTGTGAACTTTCCATAAGAGAGGGCTaGAGATACATCATGAAGGATAAGAGGTCTTATGAA | + |
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Preference number: 3 (lower is better) Translates to: EVAVCELSIREG*RYIMKDKRSYE Trigger: TTCATAAGACCTCTTATCCTTCATGATGTATCTGCAGCCCTCTCTTATGGAAAGTTCACACACTGCCACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR-3UTR CAA 90 bp | AGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTGTCTTTACATGTCCTAGATaGAGTCAAGAGGACTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: RIQIPSHQSFSPYHEWIVFTCPR*SQEDSC Trigger: ACAGGAGTCCTCTTGACTCAATCTAGGACATGTAAA...GACAATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR GCA 90 bp | AGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCTCCTTGAGGCAGCTGGAGGAGCAAACCTaGGGGTGCCCACCGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SQEDSCPQMYPGPVSLRQLEEQT*GCPPEV Trigger: AACCTCCGGTGGGCACCCGCAGGTTTGCTCCTCCAG...CTGCCTCAAGGAGACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR TCA 90 bp | CAATCTCTAGGTACAGGCTTTGGAAGCACCCCGGGGGAGGTGAGTGTGAGAAGACTACCAGGCACAGGGTaGGGCTCAAGCCCAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: QSLGTGFGSTPGEVSVRRLPGTG*GSSPES Trigger: GGATTCTGGGCTTGAGCCTCACCCTGTGCCTGGTAG...TCTTCTCACACTCACCTCCCCCGGGGTGCTTCCAAAGCCTGTACCTAGAGATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR TCA 90 bp | GGTGTTATGGGACATCAGGCTAGACTGGTAGTACTAAGCCCCATACGATGGACTGGCTGTTGCCGGTGCTaGAGAAGCCCAGGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GVMGHQARLVVLSPIRWTGCCRC*RSPGCP Trigger: TGGGCATCCTGGGCTTCTTCAGCACCGGCAACAGCC...AGTCCATCGTATGGGGCTTAGTACTACCAGTCTAGCCTGATGTCCCATAACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR TCA 90 bp | TCCTGTCCTCAGATGTATCCAGGGCCAGTCTCCTTGAGGCAGAATGGTAGCATATCGCAGCCAGCCAGGTaGGCGATCTTCTTGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: SCPQMYPGPVSLRQNGSISQPAR*AIFLAD Trigger: GTCAGCCAAGAAGATCGCTCACCTGGCTGGCTGCGA...TATGCTACCATTCTGCCTCAAGGAGACTGGCCCTGGATACATCTGAGGACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CCA 90 bp | CAATCTCTAGGTACAGGCTTTGGAAGCACCCCGGGGGAGGTGAGTGTGAGAAGACACACCATCCACCACTaGGCTCAGGAACCACACGAT | + |
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Preference number: 4 (lower is better) Translates to: QSLGTGFGSTPGEVSVRRHTIHH*AQEPHD Trigger: ATCGTGTGGTTCCTGAGCCCAGTGGTGGATGGTGTG...TCTTCTCACACTCACCTCCCCCGGGGTGCTTCCAAAGCCTGTACCTAGAGATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR GCA 90 bp | AGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCTCCTTGAGGCAGTCTCCCACATGCACTTaGTTTCCTTGGAGGATCCCG | + |
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Preference number: 4 (lower is better) Translates to: SQEDSCPQMYPGPVSLRQSPTCT*FPWRIP Trigger: CGGGATCCTCCAAGGAAAGCAAGTGCATGTGGGAGA...CTGCCTCAAGGAGACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CCA 90 bp | AGATTGAGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCTCCTTGGCACCTAAGGCTGTCTaGACTACCAGGCACAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RLSQEDSCPQMYPGPVSLAPKAV*TTRHRV Trigger: CACCCTGTGCCTGGTAGTCCAGACAGCCTTAGGTGC...CAAGGAGACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACTCAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR TCA 90 bp | CAGAATGGTAGCATAGCTCCCTCTTGCTTGGTCACTCTCAGTACAGCTGGTGCTCGAACTCTGCGTTGTTaGCACCTAGGAGGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: QNGSIAPSCLVTLSTAGARTLRC*HLGGRA Trigger: TGCCCTACCTCCTAGGTGTCAACAACGCAGAGTTCG...AGCACCAGCTGTACTGAGAGTGACCAAGCAAGAGGGAGCTATGCTACCATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CCA 90 bp | AGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCTCCTTGAGGCAGTCAGGAGAGGTTCCTTaGTGTGCAAAGCACCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: SQEDSCPQMYPGPVSLRQSGEVP*CAKHLR Trigger: CCTTAGGTGCTTTGCACACCAAGGAACCTCTCCTGA...CTGCCTCAAGGAGACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CCA 90 bp | AGATTGAGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCTCCTTGCGCAAAGCAGCTATCTaGTCCAGCAGCCCCCAATTC | + |
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Preference number: 4 (lower is better) Translates to: RLSQEDSCPQMYPGPVSLRKAAI*SSSPQF Trigger: GAATTGGGGGCTGCTGGACCAGATAGCTGCTTTGCG...CAAGGAGACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACTCAATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR GCA 90 bp | TCCTGTCCTCAGATGTATCCAGGGCCAGTCTCCTTGAGGCAGAATGGTAGCATAGCCACCACTGGGACCTaGTCCTTAGTGATATTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SCPQMYPGPVSLRQNGSIATTGT*SLVIFS Trigger: GCTGAATATCACTAAGGAGCAGGTCCCAGTGGTGGC...TATGCTACCATTCTGCCTCAAGGAGACTGGCCCTGGATACATCTGAGGACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR GCA 90 bp | CAATCTCTAGGTACAGGCTTTGGAAGCACCCCGGGGGAGGTGAGTGTGAGAAGAATTCAAATACTCTCTTaGCACCACTGGGACCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QSLGTGFGSTPGEVSVRRIQILS*HHWDLL Trigger: GAGCAGGTCCCAGTGGTGGCAAGAGAGTATTTGAAT...TCTTCTCACACTCACCTCCCCCGGGGTGCTTCCAAAGCCTGTACCTAGAGATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CCA 90 bp | TGTCCTAGATTGAGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCCCAGGAAGACTTGGATaGGTGTGTCTCCCACATGCA | + |
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Preference number: 4 (lower is better) Translates to: CPRLSQEDSCPQMYPGPVPGRLG*VCLPHA Trigger: TGCATGTGGGAGACACACCCATCCAAGTCTTCCTGG...GACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACTCAATCTAGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CCA 90 bp | CAGAATGGTAGCATAGCTCCCTCTTGCTTGGTCACTCTCAGTACAGCTGGTGCTCACCACAGGATCTTCTaGGAACACCACACCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: QNGSIAPSCLVTLSTAGAHHRIF*EHHTIH Trigger: GTGGATGGTGTGGTGTTCCCAGAAGATCCTGTGGTG...AGCACCAGCTGTACTGAGAGTGACCAAGCAAGAGGGAGCTATGCTACCATTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CCA 90 bp | CAGAATGGTAGCATAGCTCCCTCTTGCTTGGTCACTCTCAGTACAGCTGGTGCTCTCTCTTGCCACCACTaGGACCTGCTCCTTAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: QNGSIAPSCLVTLSTAGALSCHH*DLLLSD Trigger: ATCACTAAGGAGCAGGTCCCAGTGGTGGCAAGAGAG...AGCACCAGCTGTACTGAGAGTGACCAAGCAAGAGGGAGCTATGCTACCATTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR TCA 90 bp | AGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCTCCTTGAGGCAGAGAGGCAGTCCTCACTaGAATGCAGCCATTTATACT | + |
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Preference number: 4 (lower is better) Translates to: SQEDSCPQMYPGPVSLRQRGSPH*NAAIYT Trigger: AGTATAAATGGCTGCATTTCAGTGAGGACTGCCTCT...CTGCCTCAAGGAGACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CCA 90 bp | TGTCCTAGATTGAGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCCTGCAGATGAGCCTTTaGAGAAAGGGCTGCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: CPRLSQEDSCPQMYPGPVLQMSL*RKGCQR Trigger: TCTTTGGCAGCCCTTTCTCCAAAGGCTCATCTGCAG...GACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACTCAATCTAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR TCA 90 bp | CCTCAGATGTATCCAGGGCCAGTCTCCTTGAGGCAGAATGGTAGCATAGCTCCCGTTAGCCTGAAAGAATaGCATCCTCTTGGAAACAAG | + |
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Preference number: 4 (lower is better) Translates to: PQMYPGPVSLRQNGSIAPVSLKE*HPLGNK Trigger: CTTGTTTCCAAGAGGATGTCATTCTTTCAGGCTAAC...GGGAGCTATGCTACCATTCTGCCTCAAGGAGACTGGCCCTGGATACATCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR TCA 90 bp | CAGAATGGTAGCATAGCTCCCTCTTGCTTGGTCACTCTCAGTACAGCTGGTGCTTCATCATCTGGAGGCTaGATTCCTTTTCCTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: QNGSIAPSCLVTLSTAGASSSGG*IPFPHL Trigger: CAGGTGAGGAAAAGGAATTCAGCCTCCAGATGATGA...AGCACCAGCTGTACTGAGAGTGACCAAGCAAGAGGGAGCTATGCTACCATTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR TCA 90 bp | CCTCAGATGTATCCAGGGCCAGTCTCCTTGAGGCAGAATGGTAGCATAGCTCCCTTAGCTGAATCTTCATaGGAAAAGGTAAGTTCCACT | + |
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Preference number: 4 (lower is better) Translates to: PQMYPGPVSLRQNGSIAPLAESS*EKVSST Trigger: AGTGGAACTTACCTTTTCTCATGAAGATTCAGCTAA...GGGAGCTATGCTACCATTCTGCCTCAAGGAGACTGGCCCTGGATACATCTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR TCA 90 bp | CAATCTCTAGGTACAGGCTTTGGAAGCACCCCGGGGGAGGTGAGTGTGAGAAGATATTCAGCAGAACGTTaGAACTCCAGAGTATTTTGT | + |
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Preference number: 4 (lower is better) Translates to: QSLGTGFGSTPGEVSVRRYSAER*NSRVFC Trigger: ACAAAATACTCTGGAGTTTCAACGTTCTGCTGAATA...TCTTCTCACACTCACCTCCCCCGGGGTGCTTCCAAAGCCTGTACCTAGAGATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CCA 90 bp | GGTGTTATGGGACATCAGGCTAGACTGGTAGTACTAAGCCCCATACGATGGACTAGAATGACATCCTCTTaGAAACAAGCGTCACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GVMGHQARLVVLSPIRWTRMTSS*KQASPP Trigger: AGGAGGTGACGCTTGTTTCCAAGAGGATGTCATTCT...AGTCCATCGTATGGGGCTTAGTACTACCAGTCTAGCCTGATGTCCCATAACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR TCA 90 bp | AAGAGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTCTCTGGGAGATGGCTTaGTGGAACAGACCCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KRIQIPSHQSFSPYHEWILWEMA*WNRPWA Trigger: AGCCCAGGGTCTGTTCCATCAAGCCATCTCCCAGAG...AATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR TCA 90 bp | AAGAGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTCGTCACCTCCTCTGCTaGGAGAGACCTCAGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: KRIQIPSHQSFSPYHEWIRHLLC*ERPQAF Trigger: GAATGCCTGAGGTCTCTCTCAGCAGAGGAGGTGACG...AATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR GCA 90 bp | CAGAATGGTAGCATAGCTCCCTCTTGCTTGGTCACTCTCAGTACAGCTGGTGCTCAGTCCTCACTGAAATaGAGCCATTTATACTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: QNGSIAPSCLVTLSTAGAQSSLK*SHLYCF Trigger: GAAACAGTATAAATGGCTGCATTTCAGTGAGGACTG...AGCACCAGCTGTACTGAGAGTGACCAAGCAAGAGGGAGCTATGCTACCATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CCA 90 bp | AAGAGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTAAACCAAACCATCACTaGCAGCAGAGGGGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KRIQIPSHQSFSPYHEWIKPNHH*QQRGPR Trigger: CCTGGGGCCCCTCTGCTGCCAGTGATGGTTTGGTTT...AATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR GCA 90 bp | GGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTGTCTGGTGTGTCTCCCACATaGACTTGCTTTCCTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GYRSQAIKAFHHIMNGLSGVSPT*TCFPWR Trigger: CCTCCAAGGAAAGCAAGTGCATGTGGGAGACACACC...AGACAATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CCA 90 bp | AAGAGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTATCCCCAGGAAGACTTaGATGGGTGTGTCTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: KRIQIPSHQSFSPYHEWIIPRKT*MGVSPT Trigger: TGTGGGAGACACACCCATCCAAGTCTTCCTGGGGAT...AATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CCA 90 bp | AGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTGTCTACCACTCTGGGAGATaGCTTGATGGAACAGACCCT | + |
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Preference number: 4 (lower is better) Translates to: RIQIPSHQSFSPYHEWIVYHSGR*LDGTDP Trigger: AGGGTCTGTTCCATCAAGCCATCTCCCAGAGTGGTA...GACAATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR TCA 90 bp | GGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTGTCTCCATCTTTTTCTCCTTaGGCTTCACACCCACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: GYRSQAIKAFHHIMNGLSPSFSP*ASHPLL Trigger: CAAGAGTGGGTGTGAAGCTCAAGGAGAAAAAGATGG...AGACAATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| 3UTR CAA 72 bp | CAAGCCATCAAAGCTTTTCACCATATCATGAATGGATaGTCTGGGGGCCTCAAGATCATCATAAGTAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: QAIKAFHHIMNG*SGGLKIIISKQ Trigger: TTGCTTACTTATGATGATCTTGAGGCCCCCAGACAATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 90 bp | CCCAGGATTCCTGAAGGCACGAAGGTGGGTAGGTGGTGGCATCTCTaGTGCCGTTCCAGGGTAGCGGGGGCTCTGGAGGAGCAAACCTGC | + |
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Preference number: 5 (lower is better) Translates to: PRIPEGTKVGRWWHL*CRSRVAGALEEQTC Trigger: GCAGGTTTGCTCCTCCAGAGCCCCCGCTACCCTGGAACGGCATCAGAGATGCCACCACCTACCCACCTTCGTGCCTTCAGGAATCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 90 bp | GTACTGCAGAAACACCAGCACCACTTTCCCACGGGCCGCCAACTCTaGGCCTTCGTAGGTGGAAGCCGAACCGGCGAGGAAGGCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: VLQKHQHHFPTGRQL*AFVGGSRTGEEGTS Trigger: GGAGGTGCCTTCCTCGCCGGTTCGGCTTCCACCTACGAAGGCTCAGAGTTGGCGGCCCGTGGGAAAGTGGTGCTGGTGTTTCTGCAGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CCA 90 bp | CCAGCACCACTTTCCCACGGGCCGCCAACTCTGAGCCTTCGTAGGTaGAAGCCGAACCGGCGAGGAAGGCACCTCCAGGAAACCAAACCA | + |
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Preference number: 5 (lower is better) Translates to: PAPLSHGPPTLSLRR*KPNRRGRHLQETKP Trigger: TGGTTTGGTTTCCTGGAGGTGCCTTCCTCGCCGGTTCGGCTTCCACCTACGAAGGCTCAGAGTTGGCGGCCCGTGGGAAAGTGGTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 90 bp | CGTGCTATTGTGGTCGCAGCCAGCCAGGTGAGCGATCTTCTTGGCTaGCGTCAGTGGATCGGGAGTGATGAAGGCTTTCAGGACCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RAIVVAASQVSDLLG*RQWIGSDEGFQDRS Trigger: ACTGCGGTCCTGAAAGCCTTCATCACTCCCGATCCACTGACGTCAGCCAAGAAGATCGCTCACCTGGCTGGCTGCGACCACAATAGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 90 bp | CAAGCGTCACCTCCTCTGCTGAGAGAGACCTCAGGCATTCCACCATaGCCTTCGTGCTATTGTGGTCGCAGCCAGCCAGGTGAGCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: QASPPLLRETSGIPP*PSCYCGRSQPGERS Trigger: AGATCGCTCACCTGGCTGGCTGCGACCACAATAGCACGAAGGTCATGGTGGAATGCCTGAGGTCTCTCTCAGCAGAGGAGGTGACGCTTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 90 bp | TGGTGTGCAAAGCACCTAAGGCTGTCTGGACTACCAGGCACAGGGTaGGGCTCAAGCCCAGAATCCACTTCATGTTCCAGCCAGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WCAKHLRLSGLPGTG*GSSPESTSCSSQLL Trigger: CAGAAGCTGGCTGGAACATGAAGTGGATTCTGGGCTTGAGCCTCACCCTGTGCCTGGTAGTCCAGACAGCCTTAGGTGCTTTGCACACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 90 bp | GTGATGAAGGCTTTCAGGACCGCAGTACCACTCTGGGAGATGGCTTaGTGGAACAGACCCTGGGCTAGGGGTGATACCATCAGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VMKAFRTAVPLWEMA*WNRPWARGDTISPE Trigger: CTCAGGACTGATGGTATCACCCCTAGCCCAGGGTCTGTTCCATCAAGCCATCTCCCAGAGTGGTACTGCGGTCCTGAAAGCCTTCATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS GCA 90 bp | GGGATCCCCAGGAAGACTTGGATGGGTGTGTCTCCCACATGCACTTaGTTTCCTTGGAGGATCCCGTGTTTGGTGATCAGGAGAGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GIPRKTWMGVSPTCT*FPWRIPCLVIRRGS Trigger: GGAACCTCTCCTGATCACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATGTGGGAGACACACCCATCCAAGTCTTCCTGGGGATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS GCA 90 bp | GAGAAGGGGATCCCCAGGAAGACTTGGATGGGTGTGTCTCCCACATaGACTTGCTTTCCTTGGAGGATCCCGTGTTTGGTGATCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EKGIPRKTWMGVSPT*TCFPWRIPCLVIRR Trigger: TCTCCTGATCACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATGTGGGAGACACACCCATCCAAGTCTTCCTGGGGATCCCCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CCA 90 bp | AGGAAGACTTGGATGGGTGTGTCTCCCACATGCACTTGCTTTCCTTaGAGGATCCCGTGTTTGGTGATCAGGAGAGGTTCCTTGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RKTWMGVSPTCTCFP*RIPCLVIRRGSLVC Trigger: GCACACCAAGGAACCTCTCCTGATCACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATGTGGGAGACACACCCATCCAAGTCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 90 bp | TGTCTCCCACATGCACTTGCTTTCCTTGGAGGATCCCGTGTTTGGTaGTCAGGAGAGGTTCCTTGGTGTGCAAAGCACCTAAGGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLPHALAFLGGSRVW*SGEVPWCAKHLRLS Trigger: AGACAGCCTTAGGTGCTTTGCACACCAAGGAACCTCTCCTGATCACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATGTGGGAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CCA 90 bp | CAGGAGCACCACAGGATCTTCTGGGAACACCACACCATCCACCACTaGGCTCAGGAACCACACGATCTCTTTTGGATCTTTATGGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QEHHRIFWEHHTIHH*AQEPHDLFWIFMGV Trigger: AACTCCCATAAAGATCCAAAAGAGATCGTGTGGTTCCTGAGCCCAGTGGTGGATGGTGTGGTGTTCCCAGAAGATCCTGTGGTGCTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | AAGAGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTCCGCGGGCATGGCTGTaGCCGGTGCTGAAGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KRIQIPSHQSFSPYHEWIPRAWL*PVLKKP Trigger: GGGCTTCTTCAGCACCGGCAACAGCCATGCCCGCGG...AATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | TGTCCTAGATTGAGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCCATTCAAATACTCTCTaGCCACCACTGGGACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPRLSQEDSCPQMYPGPVHSNTL*PPLGPA Trigger: AGCAGGTCCCAGTGGTGGCAAGAGAGTATTTGAATG...GACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACTCAATCTAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | TGTCCTAGATTGAGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCGCCATCTTTTTCTCCTaGAGCTTCACACCCACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CPRLSQEDSCPQMYPGPVAIFFS*SFTPTL Trigger: AAGAGTGGGTGTGAAGCTCAAGGAGAAAAAGATGGC...GACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACTCAATCTAGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | AGATTGAGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCTCCTTGCTAAGGTTTCTGAGATaGGCGAAGCTGACTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RLSQEDSCPQMYPGPVSLLRFLR*AKLTPE Trigger: TTCTGGAGTCAGCTTCGCCAATCTCAGAAACCTTAG...CAAGGAGACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACTCAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 90 bp | GTATTTCATCATCTGGAGGCTGAATTCCTTTTCCTCACCTGCAGATaGGCCTTTGGAGAAAGGGCTGCCAAAGAGATAGGAAAGCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VFHHLEAEFLFLTCR*AFGERAAKEIGKLV Trigger: GACGAGCTTTCCTATCTCTTTGGCAGCCCTTTCTCCAAAGGCTCATCTGCAGGTGAGGAAAAGGAATTCAGCCTCCAGATGATGAAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 90 bp | TCTGAGATTGGCGAAGCTGACTCCAGAAAGCCATCTTTTTCTCCTTaGGCTTCACACCCACTCTTGTATCGAAGTCCAACTGCAGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SEIGEADSRKPSFSP*ASHPLLYRSPTAGT Trigger: AGTACCTGCAGTTGGACTTCGATACAAGAGTGGGTGTGAAGCTCAAGGAGAAAAAGATGGCTTTCTGGAGTCAGCTTCGCCAATCTCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | AAGAGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTACTCTGGGAGATGGCTaGATGGAACAGACCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRIQIPSHQSFSPYHEWITLGDG*MEQTLG Trigger: GCCCAGGGTCTGTTCCATCAAGCCATCTCCCAGAGT...AATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | AGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTGTCCCTGCAGATGAGCCTTaGGAGAAAGGGCTGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RIQIPSHQSFSPYHEWIVPADEP*EKGLPK Trigger: CTTTGGCAGCCCTTTCTCCAAAGGCTCATCTGCAGG...GACAATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS GCA 90 bp | CATCTTCCAGTCATGGTTACTGATAGCGTCATTCAAATACTCTCTTaGCACCACTGGGACCTGCTCCTTAGTGATATTCAGCAGAACGTT | + |
|
Preference number: 5 (lower is better) Translates to: HLPVMVTDSVIQILS*HHWDLLLSDIQQNV Trigger: AACGTTCTGCTGAATATCACTAAGGAGCAGGTCCCAGTGGTGGCAAGAGAGTATTTGAATGACGCTATCAGTAACCATGACTGGAAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CCA 90 bp | GTCATGGTTACTGATAGCGTCATTCAAATACTCTCTTGCCACCACTaGGACCTGCTCCTTAGTGATATTCAGCAGAACGTTGAAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VMVTDSVIQILSCHH*DLLLSDIQQNVETP Trigger: TGGAGTTTCAACGTTCTGCTGAATATCACTAAGGAGCAGGTCCCAGTGGTGGCAAGAGAGTATTTGAATGACGCTATCAGTAACCATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | TGTCCTAGATTGAGTCAAGAGGACTCCTGTCCTCAGATGTATCCAGGGCCAGTCTTTGTTGATGTTGGTTaGGTTCATCATACGCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: CPRLSQEDSCPQMYPGPVFVDVG*VHHTLI Trigger: AATCAGCGTATGATGAACCAAACCAACATCAACAAA...GACTGGCCCTGGATACATCTGAGGACAGGAGTCCTCTTGACTCAATCTAGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | CAGAATGGTAGCATAGCTCCCTCTTGCTTGGTCACTCTCAGTACAGCTGGTGCTATATTCAGCAGAACGTaGAAACTCCAGAGTATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QNGSIAPSCLVTLSTAGAIFSRT*KLQSIL Trigger: CAAAATACTCTGGAGTTTCAACGTTCTGCTGAATAT...AGCACCAGCTGTACTGAGAGTGACCAAGCAAGAGGGAGCTATGCTACCATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | GGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTGTCTATCAGGAGAGGTTCCTaGGTGTGCAAAGCACCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GYRSQAIKAFHHIMNGLSIRRGS*VCKAPK Trigger: CTTAGGTGCTTTGCACACCAAGGAACCTCTCCTGAT...AGACAATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | AAGAGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTATGCACTTGCTTTCCTaGGAGGATCCCGTGTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KRIQIPSHQSFSPYHEWIMHLLS*EDPVFG Trigger: ACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCAT...AATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | AGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTGTCCTCCAGAGTATTTTGTaGATGTTGGTTTGGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: RIQIPSHQSFSPYHEWIVLQSIL*MLVWFI Trigger: GATGAACCAAACCAACATCAACAAAATACTCTGGAG...GACAATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | GGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTGTCTAGTATTTTGTTGATGTaGGTTTGGTTCATCATACGC | + |
|
Preference number: 5 (lower is better) Translates to: GYRSQAIKAFHHIMNGLSSILLM*VWFIIR Trigger: GCGTATGATGAACCAAACCAACATCAACAAAATACT...AGACAATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS-3UTR CAA 90 bp | AAGAGGATACAGATCCCAAGCCATCAAAGCTTTTCACCATATCATGAATGGATTAAACTCCAGAGTATTTaGTTGATGTTGGTTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KRIQIPSHQSFSPYHEWIKLQSI*LMLVWF Trigger: GAACCAAACCAACATCAACAAAATACTCTGGAGTTT...AATCCATTCATGATATGGTGAAAAGCTTTGATGGCTTGGGATCTGTATCCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CAA 72 bp | TGGTCCAGCAGCCCCCAATTCCCGCGGGCATGGCTGTaGCCGGTGCTGAAGAAGCCCAGGATGCCCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: WSSSPQFPRAWL*PVLKKPRMPSL Trigger: CAGGCTGGGCATCCTGGGCTTCTTCAGCACCGGCAACAGCCATGCCCGCGGGAATTGGGGGCTGCTGGACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CCA 72 bp | GCTATCTGGTCCAGCAGCCCCCAATTCCCGCGGGCATaGCTGTTGCCGGTGCTGAAGAAGCCCAGGATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AIWSSSPQFPRA*LLPVLKKPRMP Trigger: GGGCATCCTGGGCTTCTTCAGCACCGGCAACAGCCATGCCCGCGGGAATTGGGGGCTGCTGGACCAGATAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 72 bp | CCTGAAGGCACGAAGGTGGGTAGGTGGTGGCATCTCTaGTGCCGTTCCAGGGTAGCGGGGGCTCTGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PEGTKVGRWWHL*CRSRVAGALEE Trigger: CTCCTCCAGAGCCCCCGCTACCCTGGAACGGCATCAGAGATGCCACCACCTACCCACCTTCGTGCCTTCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 72 bp | AAACACCAGCACCACTTTCCCACGGGCCGCCAACTCTaGGCCTTCGTAGGTGGAAGCCGAACCGGCGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: KHQHHFPTGRQL*AFVGGSRTGEE Trigger: TTCCTCGCCGGTTCGGCTTCCACCTACGAAGGCTCAGAGTTGGCGGCCCGTGGGAAAGTGGTGCTGGTGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 72 bp | CCTCCTCTGCTGAGAGAGACCTCAGGCATTCCACCATaGCCTTCGTGCTATTGTGGTCGCAGCCAGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PPLLRETSGIPP*PSCYCGRSQPG Trigger: ACCTGGCTGGCTGCGACCACAATAGCACGAAGGTCATGGTGGAATGCCTGAGGTCTCTCTCAGCAGAGGAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 72 bp | ACCATCAGTCCTGAGACGCTCATCGCTCCCGCCGACTaGCCAAATAGTGTTACACTGTCCGGGTCTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: TISPETLIAPAD*PNSVTLSGSPP Trigger: TGGTGGAGACCCGGACAGTGTAACACTATTTGGTCAGTCGGCGGGAGCGATGAGCGTCTCAGGACTGATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 72 bp | GCTTTCAGGACCGCAGTACCACTCTGGGAGATGGCTTaGTGGAACAGACCCTGGGCTAGGGGTGATACCATC | + |
|
Preference number: 6 (lower is better) Translates to: AFRTAVPLWEMA*WNRPWARGDTI Trigger: GATGGTATCACCCCTAGCCCAGGGTCTGTTCCATCAAGCCATCTCCCAGAGTGGTACTGCGGTCCTGAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CAA 90 bp | GGGGATCCCCAGGAAGACTTGGATGGGTGTGTCTCCCACATGCACTaGCTTTCCTTGGAGGATCCCGTGTTTGGTGATCAGGAGAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GDPQEDLDGCVSHMH*LSLEDPVFGDQERF Trigger: GAACCTCTCCTGATCACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATGTGGGAGACACACCCATCCAAGTCTTCCTGGGGATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CAA 72 bp | CACCGGAGGTTTAGAGAAGGGGATCCCCAGGAAGACTaGGATGGGTGTGTCTCCCACATGCACTTGCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: HRRFREGDPQED*DGCVSHMHLLS Trigger: GGAAAGCAAGTGCATGTGGGAGACACACCCATCCAAGTCTTCCTGGGGATCCCCTTCTCTAAACCTCCGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS GCA 72 bp | ATCCCCAGGAAGACTTGGATGGGTGTGTCTCCCACATaGACTTGCTTTCCTTGGAGGATCCCGTGTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IPRKTWMGVSPT*TCFPWRIPCLV Trigger: CACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATGTGGGAGACACACCCATCCAAGTCTTCCTGGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CAA 72 bp | TGGAGGATCCCGTGTTTGGTGATCAGGAGAGGTTCCTaGGTGTGCAAAGCACCTAAGGCTGTCTGGACTACC | + |
|
Preference number: 6 (lower is better) Translates to: WRIPCLVIRRGS*VCKAPKAVWTT Trigger: GGTAGTCCAGACAGCCTTAGGTGCTTTGCACACCAAGGAACCTCTCCTGATCACCAAACACGGGATCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CAA 90 bp | GGTGTGTCTCCCACATGCACTTGCTTTCCTTGGAGGATCCCGTGTTaGGTGATCAGGAGAGGTTCCTTGGTGTGCAAAGCACCTAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GVSPTCTCFPWRIPC*VIRRGSLVCKAPKA Trigger: AGCCTTAGGTGCTTTGCACACCAAGGAACCTCTCCTGATCACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATGTGGGAGACACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CAA 90 bp | CAGGAAGACTTGGATGGGTGTGTCTCCCACATGCACTTGCTTTCCTaGGAGGATCCCGTGTTTGGTGATCAGGAGAGGTTCCTTGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QEDLDGCVSHMHLLS*EDPVFGDQERFLGV Trigger: CACACCAAGGAACCTCTCCTGATCACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATGTGGGAGACACACCCATCCAAGTCTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS GCA 72 bp | AGGAAGACTTGGATGGGTGTGTCTCCCACATGCACTTaGTTTCCTTGGAGGATCCCGTGTTTGGTGATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RKTWMGVSPTCT*FPWRIPCLVIR Trigger: CCTGATCACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATGTGGGAGACACACCCATCCAAGTCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CAA 72 bp | CCCACATGCACTTGCTTTCCTTGGAGGATCCCGTGTTaGGTGATCAGGAGAGGTTCCTTGGTGTGCAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PTCTCFPWRIPC*VIRRGSLVCKA Trigger: TGCTTTGCACACCAAGGAACCTCTCCTGATCACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CAA 72 bp | TTGGATGGGTGTGTCTCCCACATGCACTTGCTTTCCTaGGAGGATCCCGTGTTTGGTGATCAGGAGAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LDGCVSHMHLLS*EDPVFGDQERF Trigger: GAACCTCTCCTGATCACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATGTGGGAGACACACCCATCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CAA 72 bp | CAGGAAGACTTGGATGGGTGTGTCTCCCACATGCACTaGCTTTCCTTGGAGGATCCCGTGTTTGGTGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: QEDLDGCVSHMH*LSLEDPVFGDQ Trigger: CTGATCACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATGTGGGAGACACACCCATCCAAGTCTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
||
| CDS TCA 72 bp | CATGCACTTGCTTTCCTTGGAGGATCCCGTGTTTGGTaGTCAGGAGAGGTTCCTTGGTGTGCAAAGCACCTA | + |
|
Preference number: 6 (lower is better) Translates to: HALAFLGGSRVW*SGEVPWCAKHL Trigger: TAGGTGCTTTGCACACCAAGGAACCTCTCCTGATCACCAAACACGGGATCCTCCAAGGAAAGCAAGTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CCA 72 bp | CACAGGATCTTCTGGGAACACCACACCATCCACCACTaGGCTCAGGAACCACACGATCTCTTTTGGATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: HRIFWEHHTIHH*AQEPHDLFWIF Trigger: AAAGATCCAAAAGAGATCGTGTGGTTCCTGAGCCCAGTGGTGGATGGTGTGGTGTTCCCAGAAGATCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 72 bp | CATCTGGAGGCTGAATTCCTTTTCCTCACCTGCAGATaGGCCTTTGGAGAAAGGGCTGCCAAAGAGATAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HLEAEFLFLTCR*AFGERAAKEIG Trigger: TCCTATCTCTTTGGCAGCCCTTTCTCCAAAGGCTCATCTGCAGGTGAGGAAAAGGAATTCAGCCTCCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS GCA 72 bp | TTGAGCTTCACACCCACTCTTGTATCGAAGTCCAACTaGAGGTACTTCTCATCCTTGTCAAAGCGTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSFTPTLVSKSN*RYFSSLSKRGQ Trigger: CTGGCCACGCTTTGACAAGGATGAGAAGTACCTGCAGTTGGACTTCGATACAAGAGTGGGTGTGAAGCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 72 bp | GGCGAAGCTGACTCCAGAAAGCCATCTTTTTCTCCTTaGGCTTCACACCCACTCTTGTATCGAAGTCCAACT | + |
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Preference number: 6 (lower is better) Translates to: GEADSRKPSFSP*ASHPLLYRSPT Trigger: AGTTGGACTTCGATACAAGAGTGGGTGTGAAGCTCAAGGAGAAAAAGATGGCTTTCTGGAGTCAGCTTCGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS GCA 72 bp | GCGTCATTCAAATACTCTCTTGCCACCACTGGGACCTaGTCCTTAGTGATATTCAGCAGAACGTTGAAACTC | + |
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Preference number: 6 (lower is better) Translates to: ASFKYSLATTGT*SLVIFSRTLKL Trigger: GAGTTTCAACGTTCTGCTGAATATCACTAAGGAGCAGGTCCCAGTGGTGGCAAGAGAGTATTTGAATGACGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS TCA 72 bp | CTCTTTTGGATCTTTATGGGAGTTAGCCTGAAAGAATaGCATCCTCTTGGAAACAAGCGTCACCTCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LFWIFMGVSLKE*HPLGNKRHLLC Trigger: GCAGAGGAGGTGACGCTTGTTTCCAAGAGGATGTCATTCTTTCAGGCTAACTCCCATAAAGATCCAAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS GCA 72 bp | GTCATGGTTACTGATAGCGTCATTCAAATACTCTCTTaGCACCACTGGGACCTGCTCCTTAGTGATATTCAG | + |
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Preference number: 6 (lower is better) Translates to: VMVTDSVIQILS*HHWDLLLSDIQ Trigger: CTGAATATCACTAAGGAGCAGGTCCCAGTGGTGGCAAGAGAGTATTTGAATGACGCTATCAGTAACCATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CCA 72 bp | ACTGATAGCGTCATTCAAATACTCTCTTGCCACCACTaGGACCTGCTCCTTAGTGATATTCAGCAGAACGTT | + |
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Preference number: 6 (lower is better) Translates to: TDSVIQILSCHH*DLLLSDIQQNV Trigger: AACGTTCTGCTGAATATCACTAAGGAGCAGGTCCCAGTGGTGGCAAGAGAGTATTTGAATGACGCTATCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CCA 72 bp | AGGTCTATCAGGCGATTTCGGAACATCTTCCAGTCATaGTTACTGATAGCGTCATTCAAATACTCTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: RSIRRFRNIFQS*LLIASFKYSLA Trigger: GGCAAGAGAGTATTTGAATGACGCTATCAGTAACCATGACTGGAAGATGTTCCGAAATCGCCTGATAGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CAA 90 bp | CTTGCCACCACTGGGACCTGCTCCTTAGTGATATTCAGCAGAACGTaGAAACTCCAGAGTATTTTGTTGATGTTGGTTTGGTTCATCATA | + |
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Preference number: 6 (lower is better) Translates to: LATTGTCSLVIFSRT*KLQSILLMLVWFII Trigger: TATGATGAACCAAACCAACATCAACAAAATACTCTGGAGTTTCAACGTTCTGCTGAATATCACTAAGGAGCAGGTCCCAGTGGTGGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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| CDS CAA 72 bp | ACTGGGACCTGCTCCTTAGTGATATTCAGCAGAACGTaGAAACTCCAGAGTATTTTGTTGATGTTGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: TGTCSLVIFSRT*KLQSILLMLVW Trigger: CCAAACCAACATCAACAAAATACTCTGGAGTTTCAACGTTCTGCTGAATATCACTAAGGAGCAGGTCCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161289.2 |
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