Pregenerated sensors for CES3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062181Ensembl transcript IDs: ENSMUST00000074403.13, ENSMUST00000093221.13, ENSMUST00000173088.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGGAGGCAGCCCCTTGCCATTGGGGTTTCCTGTGCGTGCAAACTaGCTCCATTGGGCCATCATGGTCAGGCTCAGCTGCTTCTCTTCC | + |
|
Preference number: 1 (lower is better) Translates to: QGGSPLPLGFPVRAN*LHWAIMVRLSCFSS Trigger: GGAAGAGAAGCAGCTGAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCACAGGAAACCCCAATGGCAAGGGGCTGCCTCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| 3UTR CCA 90 bp | ACGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTaGACATCCATGGGGGATGGATCATTATCATGGTGCCTGAAGGGT | + |
|
Preference number: 1 (lower is better) Translates to: TSPELCIWRSTSWSW*TSMGDGSLSWCLKG Trigger: ACCCTTCAGGCACCATGATAATGATCCATCCCCCATGGATGTCCACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| 3UTR GCA 90 bp | TCCTGGTCATGGTGGACATCCATGGGGGATGGATCATTATCATGGTaGCTGAAGGGTCTAGGTTCAAATCTAGAATCCACAGATCCACCA | + |
|
Preference number: 1 (lower is better) Translates to: SWSWWTSMGDGSLSW*LKGLGSNLESTDPP Trigger: TGGTGGATCTGTGGATTCTAGATTTGAACCTAGACCCTTCAGGCACCATGATAATGATCCATCCCCCATGGATGTCCACCATGACCAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| 3UTR TCA 90 bp | TTGATAACATTTAGTGGTTCACCATACTGGTCTTGCAGGGGCCGATaGTTTAAGAAACATGGGCTCACAGCAGCGTGGTCCAGGCTAAAG | + |
|
Preference number: 1 (lower is better) Translates to: LITFSGSPYWSCRGR*FKKHGLTAAWSRLK Trigger: CTTTAGCCTGGACCACGCTGCTGTGAGCCCATGTTTCTTAAATCATCGGCCCCTGCAAGACCAGTATGGTGAACCACTAAATGTTATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| 3UTR CCA 90 bp | ACTTCCTGGTCATGGTGGACATCCATGGGGGATGGATCATTATCATaGTGCCTGAAGGGTCTAGGTTCAAATCTAGAATCCACAGATCCA | + |
|
Preference number: 1 (lower is better) Translates to: TSWSWWTSMGDGSLS*CLKGLGSNLESTDP Trigger: TGGATCTGTGGATTCTAGATTTGAACCTAGACCCTTCAGGCACCATGATAATGATCCATCCCCCATGGATGTCCACCATGACCAGGAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| 3UTR CAA 90 bp | CAGCCCCTTGCCATTGGGGTTTCCTGTGCGTGCAAACTGGCTCCATaGGGCCATCATGGTCAGGCTCAGCTGCTTCTCTTCCTCTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: QPLAIGVSCACKLAP*GHHGQAQLLLFLCG Trigger: GCCACAGAGGAAGAGAAGCAGCTGAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCACAGGAAACCCCAATGGCAAGGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAAGGAGGCAGCCCCTTGCCATTGGGGTTTCCTGTGCGTGCAAACTGGCTCCATTCCTCTGTGGCCTCTaGGAAGGCCAGAAGGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: PRRQPLAIGVSCACKLAPFLCGL*EGQKGT Trigger: AGTTCCCTTCTGGCCTTCCCAGAGGCCACAGAGGAA...TGGAGCCAGTTTGCACGCACAGGAAACCCCAATGGCAAGGGGCTGCCTCCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTGTGCGTGCAAACTGGCTCCATTGGGCCATCATGGTCAGGCTCAGCTGCTTGGGAACTCTCATCAGTaGGGAAAGGACCTCCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SCACKLAPLGHHGQAQLLGNSHQ*GKDLQK Trigger: TTTTTGGAGGTCCTTTCCTCACTGATGAGAGTTCCC...AAGCAGCTGAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCACAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCTTCGATAGTCTGCTTTTATTTTCAAAGACCTTCAGTGAGAAAGACAAAGCAGACATGGACAGTCTaGGCTTGTGGTAGACCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LSSIVCFYFQRPSVRKTKQTWTV*ACGRPG Trigger: ACCTGGTCTACCACAAGCTCAGACTGTCCATGTCTG...CTTTGTCTTTCTCACTGAAGGTCTTTGAAAATAAAAGCAGACTATCGAAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| 3UTR GCA 72 bp | AGGAGGCAGCCCCTTGCCATTGGGGTTTCCTGTGCGTaGAAACTGGCTCCATTGGGCCATCATGGTCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RRQPLAIGVSCA*KLAPLGHHGQA Trigger: AGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCACAGGAAACCCCAATGGCAAGGGGCTGCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| 3UTR CCA 72 bp | AGCCCCTTGCCATTGGGGTTTCCTGTGCGTGCAAACTaGCTCCATTGGGCCATCATGGTCAGGCTCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SPLPLGFPVRAN*LHWAIMVRLSC Trigger: GCAGCTGAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCACAGGAAACCCCAATGGCAAGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTGGACATCCATTAATGTGCTGGACCTaGCCATACAGCAAGGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RHQNSAFGGQLPGHGGHPLMCWT*PYSKGS Trigger: TGAACCCTTGCTGTATGGCAAGGTCCAGCACATTAA...TGGATGTCCACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| 3UTR TCA 72 bp | TGGCCTCTGGGAAGGCCAGAAGGGAACTCTCATCAGTaGGGAAAGGACCTCCAAAAACAAAGGAATTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: WPLGRPEGNSHQ*GKDLQKQRNSQ Trigger: CTGAGAATTCCTTTGTTTTTGGAGGTCCTTTCCTCACTGATGAGAGTTCCCTTCTGGCCTTCCCAGAGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| 3UTR CCA 72 bp | GAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTaGACATCCATGGGGGATGGATCATTATCATGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ELCIWRSTSWSW*TSMGDGSLSWC Trigger: GCACCATGATAATGATCCATCCCCCATGGATGTCCACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| 3UTR GCA 72 bp | CAGAAACAAAAAGAAGTTGTAGTTGCCCTGCTTGGGTaGCACTATTCTTGGGTTGGCCCAGTCAGTAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QKQKEVVVALLG*HYSWVGPVSKV Trigger: GACCTTACTGACTGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTCTTTTTGTTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| 3UTR GCA 72 bp | TCTGAGCTTGTGGTAGACCAGGTTCTAATGGATGCATaGAGCTTAGAGAAGGCAGAGGAGGTTTCTCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SELVVDQVLMDA*SLEKAEEVSQE Trigger: CTCTTGAGAAACCTCCTCTGCCTTCTCTAAGCTGCATGCATCCATTAGAACCTGGTCTACCACAAGCTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| 3UTR GCA 72 bp | TGGTGGACATCCATGGGGGATGGATCATTATCATGGTaGCTGAAGGGTCTAGGTTCAAATCTAGAATCCACA | + |
|
Preference number: 3 (lower is better) Translates to: WWTSMGDGSLSW*LKGLGSNLEST Trigger: TGTGGATTCTAGATTTGAACCTAGACCCTTCAGGCACCATGATAATGATCCATCCCCCATGGATGTCCACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| 3UTR TCA 72 bp | GAAGGCAGAGGAGGTTTCTCAAGAGAACAGATCCTCTaGAGAGCTTTATTAATGTGCTGGACCTTGCCATAC | + |
|
Preference number: 3 (lower is better) Translates to: EGRGGFSREQIL*RALLMCWTLPY Trigger: GTATGGCAAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCTCCTCTGCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| 3UTR CAA 72 bp | GCCATTGGGGTTTCCTGTGCGTGCAAACTGGCTCCATaGGGCCATCATGGTCAGGCTCAGCTGCTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AIGVSCACKLAP*GHHGQAQLLLF Trigger: GAAGAGAAGCAGCTGAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCACAGGAAACCCCAATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAAGAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCACAGCTCAGCTGGGGATaGAGAGCCACAGGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QKEVVVALLGCHYSWVGPQLSWG*RATGHR Trigger: TCTGTGGCCTGTGGCTCTGCATCCCCAGCTGAGCTG...TGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTCTTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | GAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCAGTCAGTGCAAACTGGCTCCATTaGGCCATCATGGTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVVVALLGCHYSWVGPVSANWLH*AIMVRL Trigger: GAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGC...ACTGACTGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | GAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCAGTCAGTCCTGTGCGTGCAAACTaGCTCCATTGGGCCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: EVVVALLGCHYSWVGPVSPVRAN*LHWAIM Trigger: CATGATGGCCCAATGGAGCCAGTTTGCACGCACAGG...ACTGACTGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | AAGAAACATGGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACTGGGGCTGTAGATGTTaGGGGTCAGGCAGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNWGCRC*GSGSPQ Trigger: CTGAGGACTGCCTGACCCTCAACATCTACAGCCCCA...GTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCCATGTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | TGTGCGTGCAAACTGGCTCCATTGGGCCATCATGGTCAGGCTCAGCTGCTTCTCCAAATTCATGGTTGGTaGCTCCCAAAAGGTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CACKLAPLGHHGQAQLLLQIHGW*LPKGRA Trigger: TGCCCTACCTTTTGGGAGTCACCAACCATGAATTTG...GAGAAGCAGCTGAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| CDS-3UTR TCA 90 bp | CTTGCCATTGGGGTTTCCTGTGCGTGCAAACTGGCTCCATTGGGCCATCATGGTTCACCCAGGCTGGCTTaGACTTTGCAAAAGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAIGVSCACKLAPLGHHGSPRLA*TLQKNW Trigger: CCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGA...ACCATGATGGCCCAATGGAGCCAGTTTGCACGCACAGGAAACCCCAATGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACAAAAAGAAGAGCAGAGAGCCTCCGTaGATCCATACCATGACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLTAAWSRLKSLNRNKKKSREPP*IHTMTG Trigger: GCCGGTCATGGTATGGATCCACGGAGGCTCTCTGCT...CTTCTTTTTGTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | CTGTGCGTGCAAACTGGCTCCATTGGGCCATCATGGTCAGGCTCAGCTGCTTCTAGCCAGCCAAATTCATaGTTGGTGACTCCCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCVQTGSIGPSWSGSAASSQPNS*LVTPKR Trigger: CCTTTTGGGAGTCACCAACCATGAATTTGGCTGGCT...AGAAGCAGCTGAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCACGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTGGACCAGGAATCCCCTGTTaGCTGGCATGTGCTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FPRHQNSAFGGQLPGHGGPGIPC*LACACL Trigger: GAGACAAGCACATGCCAGGCAACAGGGGATTCCTGG...TCCACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACGTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | CAAAAAGAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCACCTCTGGAACTTTCCTaGTTCTCTGCTCTCGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKEVVVALLGCHYSWVGPPLELS*FSALGA Trigger: GGCACCGAGAGCAGAGAAGCAGGAAAGTTCCAGAGG...TGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTCTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | TTCCACGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTGGACGAATTCTCAGACGCATaGTCAGCCTTCACCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FHVTRTLHLEVNFLVMVDEFSDA*SAFTQA Trigger: AGCCTGGGTGAAGGCTGACCATGCGTCTGAGAATTC...GTCCACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | CAAAAAGAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCAAGACAGGAACAGGGATaGGACAATCATGCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKEVVVALLGCHYSWVGPRQEQG*DNHASS Trigger: GCTGGAGGCATGATTGTCTCATCCCTGTTCCTGTCT...TGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTCTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | GAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCAGTCAGTCAAATTCATGGTTGGTaGCTCCCAAAAGGTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVVVALLGCHYSWVGPVSQIHGW*LPKGRA Trigger: TGCCCTACCTTTTGGGAGTCACCAACCATGAATTTG...ACTGACTGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | GAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCAGTCAGTCACAGGCCACAGAATTaGCAAAGTTCTGAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVVVALLGCHYSWVGPVSHRPQN*QSSELQ Trigger: CTGAAGCTCAGAACTTTGCCAATTCTGTGGCCTGTG...ACTGACTGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | ATCATTATCATGGTGCCTGAAGGGTCTAGGTTCAAATCTAGAATCCACAGATCCCTGGACCAGCTCAGCTaGGGATGCAGAGCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IIIMVPEGSRFKSRIHRSLDQLS*GCRATG Trigger: GCCTGTGGCTCTGCATCCCCAGCTGAGCTGGTCCAG...GGATCTGTGGATTCTAGATTTGAACCTAGACCCTTCAGGCACCATGATAATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | AAGAAACATGGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACTTCTGCAGCAAACACTaGACCAGCTCAGCTGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNFCSKH*TSSAGD Trigger: ATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAA...GTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCCATGTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | AAGAAACATGGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACTCTAACTGGTTTAATTaGGGCCAAGGAGGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNSNWFN*GQGGSP Trigger: GGGGCTGCCTCCTTGGCCCCAATTAAACCAGTTAGA...GTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCCATGTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | GTGCGTGCAAACTGGCTCCATTGGGCCATCATGGTCAGGCTCAGCTGCTTCTCTACTTTGCAAAAGAACTaGGTGTATGCTGGAACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VRANWLHWAIMVRLSCFSTLQKN*VYAGTR Trigger: ACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGT...AGAGAAGCAGCTGAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| CDS-3UTR TCA 90 bp | ATATTTCCACGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTGGCGATACTGGACAGTaGCAACTACCACATCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: IFPRHQNSAFGGQLPGHGGDTGQ*QLPHPR Trigger: ACGGGGATGTGGTAGTTGTCACTGTCCAGTATCGCC...ACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACGTGGAAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | CAAAAAGAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCAGACTGTGGTAACAAATaGCAGGAGCAGACAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKEVVVALLGCHYSWVGPDCGNK*QEQTGH Trigger: GTGACCTGTCTGCTCCTGGCATTTGTTACCACAGTC...TGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTCTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | TTTCCACGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTGGAGACTGTGGTAACAAATaGCAGGAGCAGACAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPRHQNSAFGGQLPGHGGDCGNK*QEQTGH Trigger: GTGACCTGTCTGCTCCTGGCATTTGTTACCACAGTC...TCCACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACGTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | ATCATTATCATGGTGCCTGAAGGGTCTAGGTTCAAATCTAGAATCCACAGATCCCAGCTCAGCTGGGGATaGAGAGCCACAGGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIIMVPEGSRFKSRIHRSQLSWG*RATGHR Trigger: TCTGTGGCCTGTGGCTCTGCATCCCCAGCTGAGCTG...GGATCTGTGGATTCTAGATTTGAACCTAGACCCTTCAGGCACCATGATAATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | CAAAAAGAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCATCCTTTCCTTCCTTCTaGAGCAAACACTGGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKEVVVALLGCHYSWVGPSFPSF*SKHWTS Trigger: GCTGGTCCAGTGTTTGCTGCAGAAGGAAGGAAAGGA...TGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTCTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTGGTCCTTTCCTTCCTTCTaGAGCAAACACTGGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISTSPELCIWRSTSWSWWSFPSF*SKHWTS Trigger: GCTGGTCCAGTGTTTGCTGCAGAAGGAAGGAAAGGA...CCACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACGTGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | AATATTTCCACGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGCCTCTGGAACTTTCCTaGTTCTCTGCTCTCGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NISTSPELCIWRSTSWSWPLELS*FSALGA Trigger: GGCACCGAGAGCAGAGAAGCAGGAAAGTTCCAGAGG...CCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACGTGGAAATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | GGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACAAAAAGAAGGTGACAATCCCACTCTaGGATATGGCTCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLTAAWSRLKSLNRNKKKVTIPL*DMALWK Trigger: CTTCCACAGAGCCATATCCCAGAGTGGGATTGTCAC...CTTCTTTTTGTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTGGGTGACAATCCCACTCTaGGATATGGCTCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISTSPELCIWRSTSWSWWVTIPL*DMALWK Trigger: CTTCCACAGAGCCATATCCCAGAGTGGGATTGTCAC...CCACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACGTGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCTCAAGAGAACAGATCCTCTGAAGAGCTTTATTAATGTGCTGGACCTTCTGGACCAGCTCAGCTaGGGATGCAGAGCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RFLKRTDPLKSFINVLDLLDQLS*GCRATG Trigger: GCCTGTGGCTCTGCATCCCCAGCTGAGCTGGTCCAG...AAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | CAAAAAGAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCACAAATTCATGGTTGGTaGCTCCCAAAAGGTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKEVVVALLGCHYSWVGPQIHGW*LPKGRA Trigger: TGCCCTACCTTTTGGGAGTCACCAACCATGAATTTG...TGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTCTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | GGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACAAAAAGAAGGGAAGACATTTACCATaGGGTCTGTGTCCTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GLTAAWSRLKSLNRNKKKGRHLP*GLCPSH Trigger: GTGTGAAGGACACAGACCGCATGGTAAATGTCTTCC...CTTCTTTTTGTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | AAGAAACATGGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACCTTGAGCAAAGGGGATaGCCAGGAAGACATTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNLEQRG*PGRHLP Trigger: TGGTAAATGTCTTCCTGGGCATCCCCTTTGCTCAAG...GTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCCATGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | GGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACAAAAAGAAGAGCCAGCCAAATTCATaGTTGGTGACTCCCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLTAAWSRLKSLNRNKKKSQPNS*LVTPKR Trigger: CCTTTTGGGAGTCACCAACCATGAATTTGGCTGGCT...CTTCTTTTTGTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | TTTCCACGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTGGAAGCCAGCCAAATTCATaGTTGGTGACTCCCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPRHQNSAFGGQLPGHGGSQPNS*LVTPKR Trigger: CCTTTTGGGAGTCACCAACCATGAATTTGGCTGGCT...TCCACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACGTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | GATTCTGTATGTCACTCCTTGCCTCTAGGTCCTGCCTTATCTTTCTTCGATAGTTTCCTCTGTGGCCTCTaGGAAGGCCAGAAGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: DSVCHSLPLGPALSFFDSFLCGL*EGQKGT Trigger: AGTTCCCTTCTGGCCTTCCCAGAGGCCACAGAGGAA...ACTATCGAAGAAAGATAAGGCAGGACCTAGAGGCAAGGAGTGACATACAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | ATCATTATCATGGTGCCTGAAGGGTCTAGGTTCAAATCTAGAATCCACAGATCCGGCACATTGGGGGATTaGTGCTGGCATCTCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: IIIMVPEGSRFKSRIHRSGTLGD*CWHLSH Trigger: GTGTGAGAGATGCCAGCATCAATCCCCCAATGTGCC...GGATCTGTGGATTCTAGATTTGAACCTAGACCCTTCAGGCACCATGATAATGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | AAGAAACATGGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACATTTTCTCTACATCCTaGAGGCACATTGGGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNIFSTS*RHIGGL Trigger: CAATCCCCCAATGTGCCTTCAGGATGTAGAGAAAAT...GTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCCATGTTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | AAATCTAGAATCCACAGATCCACCAGTCATAGATTCTGTATGTCACTCCTTGCCAGTGCTGATCCATCCTaGGATGTGGAGGAGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: KSRIHRSTSHRFCMSLLASADPS*DVEEPT Trigger: GGTTGGCTCCTCCACATCTCAGGATGGATCAGCACT...GGCAAGGAGTGACATACAGAATCTATGACTGGTGGATCTGTGGATTCTAGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | GAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCAGTCAGTGGAAGAAGGAGTCATTaGCTATGTAGGAAATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVVVALLGCHYSWVGPVSGRRSH*LCRKCS Trigger: TGAACATTTCCTACATAGTCAATGACTCCTTCTTCC...ACTGACTGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | AAGAAACATGGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACTCTCGGTGCCATTCTTaGATTTTTCTTGGCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNSRCHS*IFLGSV Trigger: GACACTGCCAAGAAAAATTCAAGAATGGCACCGAGA...GTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCCATGTTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | TTTCCACGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTGGATCTCGGTGCCATTCTTaGATTTTTCTTGGCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPRHQNSAFGGQLPGHGGSRCHS*IFLGSV Trigger: GACACTGCCAAGAAAAATTCAAGAATGGCACCGAGA...TCCACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACGTGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | ATCATTATCATGGTGCCTGAAGGGTCTAGGTTCAAATCTAGAATCCACAGATCCCTGTTGCCTGGCATGTaGTTGTCTCCAGTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IIIMVPEGSRFKSRIHRSLLPGM*LSPVLR Trigger: CCTCAGCACTGGAGACAAGCACATGCCAGGCAACAG...GGATCTGTGGATTCTAGATTTGAACCTAGACCCTTCAGGCACCATGATAATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | TTGCCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAAAGCAGAGAGCCTCCGTaGATCCATACCATGACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPYSKGSSHFRKKQQYVQSREPP*IHTMTG Trigger: GCCGGTCATGGTATGGATCCACGGAGGCTCTCTGCT...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | TCTAGAATCCACAGATCCACCAGTCATAGATTCTGTATGTCACTCCTTGCCTCTTTCTGCAGCAAACACTaGACCAGCTCAGCTGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRIHRSTSHRFCMSLLASFCSKH*TSSAGD Trigger: ATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAA...AGAGGCAAGGAGTGACATACAGAATCTATGACTGGTGGATCTGTGGATTCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | ATATTTCCACGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTAAAGGTAGGGCACAGTaGGGAATTGCTGGTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IFPRHQNSAFGGQLPGHGKGRAQ*GIAGLL Trigger: TAGCAGACCAGCAATTCCCCACTGTGCCCTACCTTT...ACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACGTGGAAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | AGGTTTCTCAAGAGAACAGATCCTCTGAAGAGCTTTATTAATGTGCTGGACCTTGGCACATTGGGGGATTaGTGCTGGCATCTCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RFLKRTDPLKSFINVLDLGTLGD*CWHLSH Trigger: GTGTGAGAGATGCCAGCATCAATCCCCCAATGTGCC...AAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | AGGTTTCTCAAGAGAACAGATCCTCTGAAGAGCTTTATTAATGTGCTGGACCTTAGTGCTGATCCATCCTaGGATGTGGAGGAGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RFLKRTDPLKSFINVLDLSADPS*DVEEPT Trigger: GGTTGGCTCCTCCACATCTCAGGATGGATCAGCACT...AAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | TTGCCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAAGGCGATACTGGACAGTaGCAACTACCACATCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPYSKGSSHFRKKQQYVQGDTGQ*QLPHPR Trigger: ACGGGGATGTGGTAGTTGTCACTGTCCAGTATCGCC...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | AAATCTAGAATCCACAGATCCACCAGTCATAGATTCTGTATGTCACTCCTTGCCAGACAGGAACAGGGATaGGACAATCATGCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSRIHRSTSHRFCMSLLARQEQG*DNHASS Trigger: GCTGGAGGCATGATTGTCTCATCCCTGTTCCTGTCT...GGCAAGGAGTGACATACAGAATCTATGACTGGTGGATCTGTGGATTCTAGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | CTAGAATCCACAGATCCACCAGTCATAGATTCTGTATGTCACTCCTTGCCTCTATCACCCAGGCTGGCTTaGACTTTGCAAAAGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LESTDPPVIDSVCHSLPLSPRLA*TLQKNW Trigger: CCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGA...TAGAGGCAAGGAGTGACATACAGAATCTATGACTGGTGGATCTGTGGATTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCTCAAGAGAACAGATCCTCTGAAGAGCTTTATTAATGTGCTGGACCTTCTGTTGCCTGGCATGTaGTTGTCTCCAGTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RFLKRTDPLKSFINVLDLLLPGM*LSPVLR Trigger: CCTCAGCACTGGAGACAAGCACATGCCAGGCAACAG...AAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCTCAAGAGAACAGATCCTCTGAAGAGCTTTATTAATGTGCTGGACCTTCCAGGAATCCCCTGTTaGCTGGCATGTGCTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFLKRTDPLKSFINVLDLPGIPC*LACACL Trigger: GAGACAAGCACATGCCAGGCAACAGGGGATTCCTGG...AAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | ACTCTCATCAGTGAGGAAAGGACCTCCAAAAACAAAGGAATTCTCAGACGCATGAAAGGTAGGGCACAGTaGGGAATTGCTGGTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TLISEERTSKNKGILRRMKGRAQ*GIAGLL Trigger: TAGCAGACCAGCAATTCCCCACTGTGCCCTACCTTT...CATGCGTCTGAGAATTCCTTTGTTTTTGGAGGTCCTTTCCTCACTGATGAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCTCAAGAGAACAGATCCTCTGAAGAGCTTTATTAATGTGCTGGACCTTCCTGTGCGTGCAAACTaGCTCCATTGGGCCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: RFLKRTDPLKSFINVLDLPVRAN*LHWAIM Trigger: CATGATGGCCCAATGGAGCCAGTTTGCACGCACAGG...AAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | GATAGTCTGCTTTTATTTTCAAAGACCTTCAGTGAGAAAGACAAAGACTCAGACTGGGGCTGTAGATGTTaGGGGTCAGGCAGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSLLLFSKTFSEKDKDSDWGCRC*GSGSPQ Trigger: CTGAGGACTGCCTGACCCTCAACATCTACAGCCCCA...GTCTGAGTCTTTGTCTTTCTCACTGAAGGTCTTTGAAAATAAAAGCAGACTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR TCA 90 bp | AAGAAACATGGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACGGAAGAAGGAGTCATTaGCTATGTAGGAAATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNGRRSH*LCRKCS Trigger: TGAACATTTCCTACATAGTCAATGACTCCTTCTTCC...GTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCCATGTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | GAACTCTCATCAGTGAGGAAAGGACCTCCAAAAACAAAGGAATTCTCAGACGCACTTCTCTGGCCTTTGTaGGAAGAAGGAGTCATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ELSSVRKGPPKTKEFSDALLWPL*EEGVID Trigger: GTCAATGACTCCTTCTTCCCACAAAGGCCAGAGAAG...TGCGTCTGAGAATTCCTTTGTTTTTGGAGGTCCTTTCCTCACTGATGAGAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| CDS-3UTR CCA 90 bp | TTGCCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATCCATTGGGCCATCATaGTCAGGCTCAGCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPYSKGSSHFRKKQQYVQSIGPS*SGSAAS Trigger: AGAAGCAGCTGAGCCTGACCATGATGGCCCAATGGA...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCTCAAGAGAACAGATCCTCTGAAGAGCTTTATTAATGTGCTGGACCTTTCCATTGGGCCATCATaGTCAGGCTCAGCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFLKRTDPLKSFINVLDLSIGPS*SGSAAS Trigger: AGAAGCAGCTGAGCCTGACCATGATGGCCCAATGGA...AAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | TCTAGAATCCACAGATCCACCAGTCATAGATTCTGTATGTCACTCCTTGCCTCTAGCCTTCACCCAGGCTaGCTTGAACTTTGCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRIHRSTSHRFCMSLLASSLHPG*LELCKR Trigger: TCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGCT...AGAGGCAAGGAGTGACATACAGAATCTATGACTGGTGGATCTGTGGATTCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | GAACTCTCATCAGTGAGGAAAGGACCTCCAAAAACAAAGGAATTCTCAGACGCAAGCCTTCACCCAGGCTaGCTTGAACTTTGCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELSSVRKGPPKTKEFSDASLHPG*LELCKR Trigger: TCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGCT...TGCGTCTGAGAATTCCTTTGTTTTTGGAGGTCCTTTCCTCACTGATGAGAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| CDS-3UTR TCA 90 bp | ATCATTATCATGGTGCCTGAAGGGTCTAGGTTCAAATCTAGAATCCACAGATCCGGGAACTCTCATCAGTaGGGAAAGGACCTCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IIIMVPEGSRFKSRIHRSGNSHQ*GKDLQK Trigger: TTTTTGGAGGTCCTTTCCTCACTGATGAGAGTTCCC...GGATCTGTGGATTCTAGATTTGAACCTAGACCCTTCAGGCACCATGATAATGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | TTGCCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAACATTGGGGTTTCCTGTaGGTGCAAACTGGCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LPYSKGSSHFRKKQQYVQHWGFL*VQTGSI Trigger: AATGGAGCCAGTTTGCACGCACAGGAAACCCCAATG...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCTCAAGAGAACAGATCCTCTGAAGAGCTTTATTAATGTGCTGGACCTTAAAGGTAGGGCACAGTaGGGAATTGCTGGTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RFLKRTDPLKSFINVLDLKGRAQ*GIAGLL Trigger: TAGCAGACCAGCAATTCCCCACTGTGCCCTACCTTT...AAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCTCAAGAGAACAGATCCTCTGAAGAGCTTTATTAATGTGCTGGACCTTTTCCTCTGTGGCCTCTaGGAAGGCTCGAAGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: RFLKRTDPLKSFINVLDLFLCGL*EGSKVF Trigger: AAATACCTTCGAGCCTTCCCAGAGGCCACAGAGGAA...AAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074403.13 |
||
| CDS-3UTR CCA 90 bp | GGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACAAAAAGAAGAAGTATTGTTCTAACTaGTTTAATTGGGGCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLTAAWSRLKSLNRNKKKKYCSN*FNWGQG Trigger: TCCTTGGCCCCAATTAAACCAGTTAGAACAATACTT...CTTCTTTTTGTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| 3UTR CAA 72 bp | ACAGATCCACCAGTCATAGATTCTGTATGTCACTCCTaGCCTCTAGGTCCTGCCTTATCTTTCTTCGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TDPPVIDSVCHS*PLGPALSFFDS Trigger: ACTATCGAAGAAAGATAAGGCAGGACCTAGAGGCAAGGAGTGACATACAGAATCTATGACTGGTGGATCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | TTGCCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAACTTCTCTGGCCTTTGTaGGAAGAAGGAGTCATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPYSKGSSHFRKKQQYVQLLWPL*EEGVID Trigger: GTCAATGACTCCTTCTTCCCACAAAGGCCAGAGAAG...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTCGATAGTCTGCTTTTATTTTCAAAGACCTTCAGTGAGAAAGACAAAGGCAAACTGGCTCCATTaGGCCATCATGGTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSIVCFYFQRPSVRKTKANWLH*AIMVRL Trigger: GAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGC...CTTTGTCTTTCTCACTGAAGGTCTTTGAAAATAAAAGCAGACTATCGAAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | GATAGTCTGCTTTTATTTTCAAAGACCTTCAGTGAGAAAGACAAAGACTCAGACTCTAACTGGTTTAATTaGGGCCAAGGAGGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DSLLLFSKTFSEKDKDSDSNWFN*GQGGSP Trigger: GGGGCTGCCTCCTTGGCCCCAATTAAACCAGTTAGA...GTCTGAGTCTTTGTCTTTCTCACTGAAGGTCTTTGAAAATAAAAGCAGACTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | GATAGTCTGCTTTTATTTTCAAAGACCTTCAGTGAGAAAGACAAAGACTCAGACCATTGGGGTTTCCTGTaGGTGCAAACTGGCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: DSLLLFSKTFSEKDKDSDHWGFL*VQTGSI Trigger: AATGGAGCCAGTTTGCACGCACAGGAAACCCCAATG...GTCTGAGTCTTTGTCTTTCTCACTGAAGGTCTTTGAAAATAAAAGCAGACTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | CTTTCTTCGATAGTCTGCTTTTATTTTCAAAGACCTTCAGTGAGAAAGACAAAGGGAAGACATTTACCATaGGGTCTGTGTCCTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSSIVCFYFQRPSVRKTKGRHLP*GLCPSH Trigger: GTGTGAAGGACACAGACCGCATGGTAAATGTCTTCC...CTTTGTCTTTCTCACTGAAGGTCTTTGAAAATAAAAGCAGACTATCGAAGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | ATCATTATCATGGTGCCTGAAGGGTCTAGGTTCAAATCTAGAATCCACAGATCCAAGTATTGTTCTAACTaGTTTAATTGGGGCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IIIMVPEGSRFKSRIHRSKYCSN*FNWGQG Trigger: TCCTTGGCCCCAATTAAACCAGTTAGAACAATACTT...GGATCTGTGGATTCTAGATTTGAACCTAGACCCTTCAGGCACCATGATAATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCTCAAGAGAACAGATCCTCTGAAGAGCTTTATTAATGTGCTGGACCTTATGTTCACGTTTTTCTaGTTGATAAGGTCCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RFLKRTDPLKSFINVLDLMFTFF*LIRSFP Trigger: AGGAAAGGACCTTATCAAGCAGAAAAACGTGAACAT...AAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTCGATAGTCTGCTTTTATTTTCAAAGACCTTCAGTGAGAAAGACAAAGACTTTGCAAAAGAACTaGGTGTATGCTGGAACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSIVCFYFQRPSVRKTKTLQKN*VYAGTR Trigger: ACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGT...CTTTGTCTTTCTCACTGAAGGTCTTTGAAAATAAAAGCAGACTATCGAAGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| 3UTR CAA 72 bp | AGCAGTATGTTCAATGATCAAGAAGTAGAAACCAGATaGATAACATTTAGTGGTTCACCATACTGGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSMFNDQEVETR*ITFSGSPYWSC Trigger: GCAAGACCAGTATGGTGAACCACTAAATGTTATCAATCTGGTTTCTACTTCTTGATCATTGAACATACTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS GCA 90 bp | CCACTGGTGCTTGAGCAAAGGGGATGCCCAGGAAGACATTTACCATaGGGTCTGTGTCCTTCACACCCACCTGCCGGCCTCGAACACGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLVLEQRGCPGRHLP*GLCPSHPPAGLEHD Trigger: GTCGTGTTCGAGGCCGGCAGGTGGGTGTGAAGGACACAGACCGCATGGTAAATGTCTTCCTGGGCATCCCCTTTGCTCAAGCACCAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS TCA 90 bp | ATACTGGACAGTGACAACTACCACATCCCCGTACGCGGCCAGTGCTaGTCCATCCTGAGATGTGGAGGAGCCAACCAGCAGAGAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILDSDNYHIPVRGQC*SILRCGGANQQRAS Trigger: GGAGGCTCTCTGCTGGTTGGCTCCTCCACATCTCAGGATGGATCAGCACTGGCCGCGTACGGGGATGTGGTAGTTGTCACTGTCCAGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS CCA 90 bp | TGCTTGTCTCCAGTGCTGAGGAAGCCAAAGATCCCAAGGCGATACTaGACAGTGACAACTACCACATCCCCGTACGCGGCCAGTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: CLSPVLRKPKIPRRY*TVTTTTSPYAASAD Trigger: ATCAGCACTGGCCGCGTACGGGGATGTGGTAGTTGTCACTGTCCAGTATCGCCTTGGGATCTTTGGCTTCCTCAGCACTGGAGACAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS GCA 90 bp | CTTTCCTTCCTTCTGCAGCAAACACTGGACCAGCTCAGCTGGGGATaGAGAGCCACAGGCCACAGAATTGGCAAAGTTCTGAGCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSFLLQQTLDQLSWG*RATGHRIGKVLSFR Trigger: CCTGAAGCTCAGAACTTTGCCAATTCTGTGGCCTGTGGCTCTGCATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAAGGAAGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS CCA 90 bp | ACTGGACCAGCTCAGCTGGGGATGCAGAGCCACAGGCCACAGAATTaGCAAAGTTCTGAGCTTCAGGCCATGGTTTCATGTCTTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TGPAQLGMQSHRPQN*QSSELQAMVSCLPS Trigger: TGATGGAAGACATGAAACCATGGCCTGAAGCTCAGAACTTTGCCAATTCTGTGGCCTGTGGCTCTGCATCCCCAGCTGAGCTGGTCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | GCCATTGGGGTTTCCTGTGCGTGCAAACTGGCTCCATTGGGCCATCATGGTCAGTTCACCCAGGCTGGCTaGAACTTTGCAAAAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: AIGVSCACKLAPLGHHGQFTQAG*NFAKEL Trigger: CAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAA...CTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCACAGGAAACCCCAATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| CDS GCA 90 bp | GCCTTCACCCAGGCTGGCTTGAACTTTGCAAAAGAACTGGGTGTATaGTGGAACTCGTACAAGAAAACAGGGCACCCAGCATCTCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AFTQAGLNFAKELGV*WNSYKKTGHPASRR Trigger: CCTTCGAGATGCTGGGTGCCCTGTTTTCTTGTACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | AAGAAACATGGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACTTGCCTGGCATGTGCTaGTCTCCAGTGCTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNLPGMC*SPVLRK Trigger: CTTCCTCAGCACTGGAGACAAGCACATGCCAGGCAA...GTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCCATGTTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | CGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTGGACATCCAAAGATAGTGACACAGTaGGGATCACCCCCAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RHQNSAFGGQLPGHGGHPKIVTQ*GSPPKG Trigger: CCCCTTTGGGGGTGATCCCAACTGTGTCACTATCTT...TGGATGTCCACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS TCA 90 bp | TCAGCTGGGGATGCAGAGCCACAGGCCACAGAATTGGCAAAGTTCTaGGCTTCAGGCCATGGTTTCATGTCTTCCATCATAATGGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SAGDAEPQATELAKF*ASGHGFMSSIIMVV Trigger: CACGACCATTATGATGGAAGACATGAAACCATGGCCTGAAGCTCAGAACTTTGCCAATTCTGTGGCCTGTGGCTCTGCATCCCCAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS TCA 90 bp | CTTCCTCTGTGGCCTCTGGGAAGGCCAGAAGGGAACTCTCATCAGTaGGGAAAGGACCTCCAAAAACAAAGGAATTCTCAGACGCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPLWPLGRPEGNSHQ*GKDLQKQRNSQTHG Trigger: ACCATGCGTCTGAGAATTCCTTTGTTTTTGGAGGTCCTTTCCTCACTGATGAGAGTTCCCTTCTGGCCTTCCCAGAGGCCACAGAGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS GCA 90 bp | GCCTTCACCCAGGCTGGCTTGAACTTTGCAAAAGAACTGGGTGTATaGTGGAACTCGTACAAGAAAACAGGGCACCCAGCATCTTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFTQAGLNFAKELGV*WNSYKKTGHPASCS Trigger: GCTACAAGATGCTGGGTGCCCTGTTTTCTTGTACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| CDS CCA 90 bp | TTTTTCTGCTTGATAAGGTCCTTTCCTTCCTTCTGCAGCAAACACTaGACCAGCTCAGCTGGGGATGCAGAGCCACAGGCCACAGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: FFCLIRSFPSFCSKH*TSSAGDAEPQATEL Trigger: CAATTCTGTGGCCTGTGGCTCTGCATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAAGGAAGGAAAGGACCTTATCAAGCAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | AAGAAACATGGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACAAGATAGTGACACAGTaGGGATCACCCCCAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNKIVTQ*GSPPKG Trigger: CCCCTTTGGGGGTGATCCCAACTGTGTCACTATCTT...GTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCCATGTTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS GCA 90 bp | GAAATGTTCACGTTTTTCTGCTTGATAAGGTCCTTTCCTTCCTTCTaGAGCAAACACTGGACCAGCTCAGCTGGGGATGCAGAGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: EMFTFFCLIRSFPSF*SKHWTSSAGDAEPQ Trigger: CTGTGGCTCTGCATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAAGGAAGGAAAGGACCTTATCAAGCAGAAAAACGTGAACATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS TCA 90 bp | CAAAGGAATTCTCAGACGCATGGTCAGCCTTCACCCAGGCTGGCTTaGACTTTGCAAAAGAACTGGGTGTATGCTGGAACTCGTACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRNSQTHGQPSPRLA*TLQKNWVYAGTRTR Trigger: TCTTGTACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGCTGACCATGCGTCTGAGAATTCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS GCA 90 bp | ATTCTCAGACGCATGGTCAGCCTTCACCCAGGCTGGCTTGAACTTTaGAAAAGAACTGGGTGTATGCTGGAACTCGTACAAGAAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: ILRRMVSLHPGWLEL*KRTGCMLELVQENR Trigger: CCTGTTTTCTTGTACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGCTGACCATGCGTCTGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS CCA 90 bp | CATGGTTTCATGTCTTCCATCATAATGGTCGTGACAATCCCACTCTaGGATATGGCTCTGTGGAAGAGCCCAGCAGATATTGGAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGFMSSIIMVVTIPL*DMALWKSPADIGDR Trigger: CCTGTCTCCAATATCTGCTGGGCTCTTCCACAGAGCCATATCCCAGAGTGGGATTGTCACGACCATTATGATGGAAGACATGAAACCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS CCA 90 bp | TTCACCCAGGCTGGCTTGAACTTTGCAAAAGAACTGGGTGTATGCTaGAACTCGTACAAGAAAACAGGGCACCCAGCATCTCGAAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FTQAGLNFAKELGVC*NSYKKTGHPASRRY Trigger: ATACCTTCGAGATGCTGGGTGCCCTGTTTTCTTGTACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | GAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCAGTCAGTAGGCCAAATCTGCTGTaGATCATTTTCTCTACATCC | + |
|
Preference number: 5 (lower is better) Translates to: EVVVALLGCHYSWVGPVSRPNLL*IIFSTS Trigger: GGATGTAGAGAAAATGATCAACAGCAGATTTGGCCT...ACTGACTGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | TCTAGAATCCACAGATCCACCAGTCATAGATTCTGTATGTCACTCCTTGCCTCTTGCAAACTGGCTCCATaGGGCCATCATGGTCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRIHRSTSHRFCMSLLASCKLAP*GHHGQA Trigger: AGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCA...AGAGGCAAGGAGTGACATACAGAATCTATGACTGGTGGATCTGTGGATTCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACGTCACCAGAACTCTGCATTTGGAGGTCAACTTCCTGGTCATGGTGGTTCACCCAGGCTGGCTaGAACTTTGCAAAAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: ISTSPELCIWRSTSWSWWFTQAG*NFAKEL Trigger: CAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAA...CCACCATGACCAGGAAGTTGACCTCCAAATGCAGAGTTCTGGTGACGTGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS TCA 90 bp | CTGCTTCTCTTCCTCTGTGGCCTCTGGGAAGGCTCGAAGGTATTTTaGGAAGTTCAAGGTAGGAATGATGAACGAGATATCACCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLFLCGLWEGSKVF*EVQGRNDERDITQQ Trigger: TTGCTGGGTGATATCTCGTTCATCATTCCTACCTTGAACTTCTCAAAATACCTTCGAGCCTTCCCAGAGGCCACAGAGGAAGAGAAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074403.13 |
||
| CDS TCA 90 bp | GGAACTCGTACAAGAAAACAGGGCACCCAGCATCTTGTAGCTGATTaGTCTGAGCCATTGTCTAGGTATTCATCGATGACAGTGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GTRTRKQGTQHLVAD*SEPLSRYSSMTVGM Trigger: CATGCCCACTGTCATCGATGAATACCTAGACAATGGCTCAGATCAATCAGCTACAAGATGCTGGGTGCCCTGTTTTCTTGTACGAGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| CDS CCA 90 bp | TCAGTGAGGAAAGGACCTCCAAAAACAAAGGAATTCTCAGACGCATaGTCAGCCTTCACCCAGGCTGGCTTGAACTTTGCAAAAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SVRKGPPKTKEFSDA*SAFTQAGLNFAKEL Trigger: CAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGCTGACCATGCGTCTGAGAATTCCTTTGTTTTTGGAGGTCCTTTCCTCACTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | GGCCAGAAGGGAACTCTCATCAGTGAGGAAAGGACCTCCAAAAACAAAGGAATTGAGCTTCTCTGGCCTTaGTGGGAAGAAGGAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: GQKGTLISEERTSKNKGIELLWP*WEEGVI Trigger: AATGACTCCTTCTTCCCACAAAGGCCAGAGAAGCTC...AATTCCTTTGTTTTTGGAGGTCCTTTCCTCACTGATGAGAGTTCCCTTCTGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173088.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACAAAAAGAAGCTCTCGGTGCCATTCTaGAATTTTTCTTGGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GLTAAWSRLKSLNRNKKKLSVPF*NFSWQC Trigger: ACACTGCCAAGAAAAATTCAAGAATGGCACCGAGAG...CTTCTTTTTGTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | AAGAAACATGGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACCTCTCGGTGCCATTCTaGAATTTTTCTTGGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNLSVPF*NFSWQC Trigger: ACACTGCCAAGAAAAATTCAAGAATGGCACCGAGAG...GTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCCATGTTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS TCA 90 bp | GAGATATCACCCAGCAATTCCTGGAAGGCATACCTTGTAGCTGATTaGTCTGAGCCATTGTCTAGGTATTCATCGATGACAGTGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: EISPSNSWKAYLVAD*SEPLSRYSSMTVGM Trigger: CATGCCCACTGTCATCGATGAATACCTAGACAATGGCTCAGATCAATCAGCTACAAGGTATGCCTTCCAGGAATTGCTGGGTGATATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS CCA 90 bp | AAAAACAAAGGAATTCTCAGACGCATGGTCAGCCTTCACCCAGGCTaGCTTGAACTTTGCAAAAGAACTGGGTGTATGCTGGAACTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: KNKGILRRMVSLHPG*LELCKRTGCMLELV Trigger: TACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGCTGACCATGCGTCTGAGAATTCCTTTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | AAGAAACATGGGCTCACAGCAGCGTGGTCCAGGCTAAAGTCTCTGAACAGAAACAGGCCAAATCTGCTGTaGATCATTTTCTCTACATCC | + |
|
Preference number: 5 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNRPNLL*IIFSTS Trigger: GGATGTAGAGAAAATGATCAACAGCAGATTTGGCCT...GTTTCTGTTCAGAGACTTTAGCCTGGACCACGCTGCTGTGAGCCCATGTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | AGGTTTCTCAAGAGAACAGATCCTCTGAAGAGCTTTATTAATGTGCTGGACCTTTTGCCTGGCATGTGCTaGTCTCCAGTGCTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RFLKRTDPLKSFINVLDLLPGMC*SPVLRK Trigger: CTTCCTCAGCACTGGAGACAAGCACATGCCAGGCAA...AAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | TTGCCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATCCAGGAATCCCCTGTaGCCTGGCATGTGCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPYSKGSSHFRKKQQYVQSRNPL*PGMCLS Trigger: AGACAAGCACATGCCAGGCAACAGGGGATTCCTGGA...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | ATCATTATCATGGTGCCTGAAGGGTCTAGGTTCAAATCTAGAATCCACAGATCCAGAGCCCAGCAGATATaGGAGACAGGAACAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: IIIMVPEGSRFKSRIHRSRAQQI*ETGTGM Trigger: CATCCCTGTTCCTGTCTCCAATATCTGCTGGGCTCT...GGATCTGTGGATTCTAGATTTGAACCTAGACCCTTCAGGCACCATGATAATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | AGGTTTCTCAAGAGAACAGATCCTCTGAAGAGCTTTATTAATGTGCTGGACCTTTGCAAACTGGCTCCATaGGGCCATCATGGTCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RFLKRTDPLKSFINVLDLCKLAP*GHHGQA Trigger: AGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCA...AAGGTCCAGCACATTAATAAAGCTCTTCAGAGGATCTGTTCTCTTGAGAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | TTGCCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAAAGAGCCCAGCAGATATaGGAGACAGGAACAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LPYSKGSSHFRKKQQYVQRAQQI*ETGTGM Trigger: CATCCCTGTTCCTGTCTCCAATATCTGCTGGGCTCT...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | CAAAAAGAAGTTGTAGTTGCCCTGCTTGGGTGCCACTATTCTTGGGTTGGCCCAATTCTTGAATTTTTCTaGGCAGTGTCTCTGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QKEVVVALLGCHYSWVGPILEFF*AVSLSR Trigger: TCTGGACAGAGACACTGCCAAGAAAAATTCAAGAAT...TGGGCCAACCCAAGAATAGTGGCACCCAAGCAGGGCAACTACAACTTCTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS TCA 90 bp | GAACTCGTACAAGAAAACAGGGCACCCAGCATCTCGAAGGTATTTTaGGAAGTTCAAGGTAGGAATGATGAACGAGATATCACCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ELVQENRAPSISKVF*EVQGRNDERDITQQ Trigger: TTGCTGGGTGATATCTCGTTCATCATTCCTACCTTGAACTTCTCAAAATACCTTCGAGATGCTGGGTGCCCTGTTTTCTTGTACGAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | TTGCCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAAGAGCTTCTCTGGCCTTaGTGGGAAGAAGGAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LPYSKGSSHFRKKQQYVQELLWP*WEEGVI Trigger: AATGACTCCTTCTTCCCACAAAGGCCAGAGAAGCTC...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | CTAGAATCCACAGATCCACCAGTCATAGATTCTGTATGTCACTCCTTGCCTCTAATTCTTGAATTTTTCTaGGCAGTGTCTCTGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LESTDPPVIDSVCHSLPLILEFF*AVSLSR Trigger: TCTGGACAGAGACACTGCCAAGAAAAATTCAAGAAT...TAGAGGCAAGGAGTGACATACAGAATCTATGACTGGTGGATCTGTGGATTCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS-3UTR CAA 90 bp | CTTTCTTCGATAGTCTGCTTTTATTTTCAAAGACCTTCAGTGAGAAAGACAAAGGAGCTTCTCTGGCCTTaGTGGGAAGAAGGAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LSSIVCFYFQRPSVRKTKELLWP*WEEGVI Trigger: AATGACTCCTTCTTCCCACAAAGGCCAGAGAAGCTC...CTTTGTCTTTCTCACTGAAGGTCTTTGAAAATAAAAGCAGACTATCGAAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS CCA 72 bp | CCCCGTACGCGGCCAGTGCTGATCCATCCTGAGATGTaGAGGAGCCAACCAGCAGAGAGCCTCCGTGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: PRTRPVLIHPEM*RSQPAESLRGS Trigger: GGATCCACGGAGGCTCTCTGCTGGTTGGCTCCTCCACATCTCAGGATGGATCAGCACTGGCCGCGTACGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS TCA 72 bp | AGTGACAACTACCACATCCCCGTACGCGGCCAGTGCTaGTCCATCCTGAGATGTGGAGGAGCCAACCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SDNYHIPVRGQC*SILRCGGANQQ Trigger: CTGCTGGTTGGCTCCTCCACATCTCAGGATGGATCAGCACTGGCCGCGTACGGGGATGTGGTAGTTGTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS GCA 72 bp | CTTGAGCAAAGGGGATGCCCAGGAAGACATTTACCATaGGGTCTGTGTCCTTCACACCCACCTGCCGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LEQRGCPGRHLP*GLCPSHPPAGL Trigger: GAGGCCGGCAGGTGGGTGTGAAGGACACAGACCGCATGGTAAATGTCTTCCTGGGCATCCCCTTTGCTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS CCA 72 bp | CCAGTGCTGAGGAAGCCAAAGATCCCAAGGCGATACTaGACAGTGACAACTACCACATCCCCGTACGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PVLRKPKIPRRY*TVTTTTSPYAA Trigger: GGCCGCGTACGGGGATGTGGTAGTTGTCACTGTCCAGTATCGCCTTGGGATCTTTGGCTTCCTCAGCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS GCA 72 bp | ACCGAAGAGGTCCCACTGGTGCTTGAGCAAAGGGGATaGCCAGGAAGACATTTACCATGCGGTCTGTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TEEVPLVLEQRG*PGRHLPCGLCP Trigger: AGGACACAGACCGCATGGTAAATGTCTTCCTGGGCATCCCCTTTGCTCAAGCACCAGTGGGACCTCTTCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS CCA 72 bp | ATGGTCGTGACAATCCCACTCTGGGATATGGCTCTGTaGAAGAGCCCAGCAGATATTGGAGACAGGAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: MVVTIPLWDMAL*KSPADIGDRNR Trigger: CCTGTTCCTGTCTCCAATATCTGCTGGGCTCTTCCACAGAGCCATATCCCAGAGTGGGATTGTCACGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS TCA 72 bp | TCTCAGACGCATGGTCAGCCTTCACCCAGGCTGGCTTaGACTTTGCAAAAGAACTGGGTGTATGCTGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: SQTHGQPSPRLA*TLQKNWVYAGT Trigger: AGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGCTGACCATGCGTCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS GCA 72 bp | CGCATGGTCAGCCTTCACCCAGGCTGGCTTGAACTTTaGAAAAGAACTGGGTGTATGCTGGAACTCGTACAA | + |
|
Preference number: 6 (lower is better) Translates to: RMVSLHPGWLEL*KRTGCMLELVQ Trigger: TTGTACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGCTGACCATGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS CCA 72 bp | ATGCCAGGAGCAGACAGGTCACCCAGACTAGGACACTaGACCCAGCTGGTATCATTGTCCTCATATTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: MPGADRSPRLGH*TQLVSLSSYLS Trigger: TGACAAATATGAGGACAATGATACCAGCTGGGTCCAGTGTCCTAGTCTGGGTGACCTGTCTGCTCCTGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS CAA 72 bp | TTCTCAGACGCATGGTCAGCCTTCACCCAGGCTGGCTaGAACTTTGCAAAAGAACTGGGTGTATGCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FSDAWSAFTQAG*NFAKELGVCWN Trigger: GTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGCTGACCATGCGTCTGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS GCA 72 bp | ACGTTTTTCTGCTTGATAAGGTCCTTTCCTTCCTTCTaGAGCAAACACTGGACCAGCTCAGCTGGGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: TFFCLIRSFPSF*SKHWTSSAGDA Trigger: TGCATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAAGGAAGGAAAGGACCTTATCAAGCAGAAAAACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS GCA 72 bp | CAGGCTGGCTTGAACTTTGCAAAAGAACTGGGTGTATaGTGGAACTCGTACAAGAAAACAGGGCACCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QAGLNFAKELGV*WNSYKKTGHPA Trigger: TGCTGGGTGCCCTGTTTTCTTGTACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093221.13 ENSMUST00000173088.2 |
||
| CDS CAA 90 bp | ACAAAGGAATTCTCAGACGCATGGTCAGCCTTCACCCAGGCTGGCTaGAACTTTGCAAAAGAACTGGGTGTATGCTGGAACTCGTACAAG | + |
|
Preference number: 6 (lower is better) Translates to: TKEFSDAWSAFTQAG*NFAKELGVCWNSYK Trigger: CTTGTACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGCTGACCATGCGTCTGAGAATTCCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||
| CDS TCA 72 bp | GATGCAGAGCCACAGGCCACAGAATTGGCAAAGTTCTaGGCTTCAGGCCATGGTTTCATGTCTTCCATCATA | + |
|
Preference number: 6 (lower is better) Translates to: DAEPQATELAKF*ASGHGFMSSII Trigger: TATGATGGAAGACATGAAACCATGGCCTGAAGCTCAGAACTTTGCCAATTCTGTGGCCTGTGGCTCTGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS TCA 72 bp | CCCAGCAATTCCTGGAAGGCATACCTTGTAGCTGATTaGTCTGAGCCATTGTCTAGGTATTCATCGATGACA | + |
|
Preference number: 6 (lower is better) Translates to: PSNSWKAYLVAD*SEPLSRYSSMT Trigger: TGTCATCGATGAATACCTAGACAATGGCTCAGATCAATCAGCTACAAGGTATGCCTTCCAGGAATTGCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074403.13 ENSMUST00000093221.13 |
||
| CDS TCA 72 bp | TTCCTCTGTGGCCTCTGGGAAGGCTCGAAGGTATTTTaGGAAGTTCAAGGTAGGAATGATGAACGAGATATC | + |
|
Preference number: 6 (lower is better) Translates to: FLCGLWEGSKVF*EVQGRNDERDI Trigger: GATATCTCGTTCATCATTCCTACCTTGAACTTCTCAAAATACCTTCGAGCCTTCCCAGAGGCCACAGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074403.13 |
||
| CDS TCA 72 bp | CAAGAAAACAGGGCACCCAGCATCTCGAAGGTATTTTaGGAAGTTCAAGGTAGGAATGATGAACGAGATATC | + |
|
Preference number: 6 (lower is better) Translates to: QENRAPSISKVF*EVQGRNDERDI Trigger: GATATCTCGTTCATCATTCCTACCTTGAACTTCTCAAAATACCTTCGAGATGCTGGGTGCCCTGTTTTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093221.13 |
||