Pregenerated sensors for CES3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069922Ensembl transcript IDs: ENSMUST00000093222.13, ENSMUST00000093223.5
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTCTGAACAGAAACAAAAAGAAGTTGTAGTTGCCCTGCTTGGATaGTACTATTCTTGGGTTGGCCCAGTCAGGAAGGTCCAGGTAGGT | + |
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Preference number: 1 (lower is better) Translates to: VSEQKQKEVVVALLG*YYSWVGPVRKVQVG Trigger: ACCTACCTGGACCTTCCTGACTGGGCCAACCCAAGAATAGTAGCATCCAAGCAGGGCAACTACAACTTCTTTTTGTTTCTGTTCAGAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| 3UTR-3UTR CCA 90 bp | GTACCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGTAGTTGCCCTGCTTaGATGCTACTATTCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: VPYSKGSSHFRKKQQYVQCSCPA*MLLFLG Trigger: ACCCAAGAATAGTAGCATCCAAGCAGGGCAACTACA...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAACCTGTAGTTGCCCTGCTTaGATGCTACTATTCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: QVTLGRNSSMFNDQEVETCSCPA*MLLFLG Trigger: ACCCAAGAATAGTAGCATCCAAGCAGGGCAACTACA...GGTTTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| 3UTR-3UTR GCA 90 bp | ATGTTCAATGATCAAGAAGTAGAAACCAGATTGGTAACATTTAGTGGTCCACCAAAAAGAAGTTGTAGTTaGCCTGCTTGGATGCTACTA | + |
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Preference number: 2 (lower is better) Translates to: MFNDQEVETRLVTFSGPPKRSCS*PAWMLL Trigger: TAGTAGCATCCAAGCAGGGCAACTACAACTTCTTTT...TGGTGGACCACTAAATGTTACCAATCTGGTTTCTACTTCTTGATCATTGAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| 3UTR CCA 72 bp | GAAGTTGTAGTTGCCCTGCTTGGATGCTACTATTCTTaGGTTGGCCCAGTCAGGAAGGTCCAGGTAGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: EVVVALLGCYYS*VGPVRKVQVGL Trigger: CAGACCTACCTGGACCTTCCTGACTGGGCCAACCCAAGAATAGTAGCATCCAAGCAGGGCAACTACAACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| 3UTR GCA 72 bp | CAGAAACAAAAAGAAGTTGTAGTTGCCCTGCTTGGATaGTACTATTCTTGGGTTGGCCCAGTCAGGAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: QKQKEVVVALLG*YYSWVGPVRKV Trigger: GACCTTCCTGACTGGGCCAACCCAAGAATAGTAGCATCCAAGCAGGGCAACTACAACTTCTTTTTGTTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | TGGATGCTACTATTCTTGGGTTGGCCCAGTCAGGAAGGTCCAGGTAGGTCTGGCGGCGATACTGGACAGTaGCAACTACCACATCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: WMLLFLGWPSQEGPGRSGGDTGQ*QLPHPH Trigger: ATGGGGATGTGGTAGTTGTCACTGTCCAGTATCGCC...GCCAGACCTACCTGGACCTTCCTGACTGGGCCAACCCAAGAATAGTAGCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR CCA 90 bp | TGGATGCTACTATTCTTGGGTTGGCCCAGTCAGGAAGGTCCAGGTAGGTCTGGCTCACCCAGCAATTCCTaGAGGGCATACCTTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: WMLLFLGWPSQEGPGRSGSPSNS*RAYLVA Trigger: AGCTACAAGGTATGCCCTCCAGGAATTGCTGGGTGA...GCCAGACCTACCTGGACCTTCCTGACTGGGCCAACCCAAGAATAGTAGCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | TGGATGCTACTATTCTTGGGTTGGCCCAGTCAGGAAGGTCCAGGTAGGTCTGGCATTCTCTCTACATCCTaGAGGCACATTGGGGGATTG | + |
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Preference number: 4 (lower is better) Translates to: WMLLFLGWPSQEGPGRSGILSTS*RHIGGL Trigger: CAATCCCCCAATGTGCCTTCAGGATGTAGAGAGAAT...GCCAGACCTACCTGGACCTTCCTGACTGGGCCAACCCAAGAATAGTAGCATCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR GCA 90 bp | AGTTGCCCTGCTTGGATGCTACTATTCTTGGGTTGGCCCAGTCAGGAAGGTCCAGGCACAGTGGGGAATTaGTTGTTTGCTAGGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SCPAWMLLFLGWPSQEGPGTVGN*LFARSF Trigger: GAAGCTCCTAGCAAACAAGCAATTCCCCACTGTGCC...TGGACCTTCCTGACTGGGCCAACCCAAGAATAGTAGCATCCAAGCAGGGCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
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| CDS-3UTR CCA 90 bp | AAGAAACATGGGCTCACAGCAGCATGGTCCAGGCTAAAGTCTCTGAACAGAAACCCCCACTCTGCGATATaGCTCTGTGGAAGAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNPHSAI*LCGRAQ Trigger: CTGGGCTCTTCCACAGAGCCATATCGCAGAGTGGGG...GTTTCTGTTCAGAGACTTTAGCCTGGACCATGCTGCTGTGAGCCCATGTTTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR GCA 90 bp | AAGAAACATGGGCTCACAGCAGCATGGTCCAGGCTAAAGTCTCTGAACAGAAACAAGAGGTCCCAGTGGTaGTTGAGCAAAGGGGATGCC | + |
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Preference number: 4 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNKRSQW*LSKGDA Trigger: GGCATCCCCTTTGCTCAAGCACCACTGGGACCTCTT...GTTTCTGTTCAGAGACTTTAGCCTGGACCATGCTGCTGTGAGCCCATGTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR CCA 90 bp | AGTTGCCCTGCTTGGATGCTACTATTCTTGGGTTGGCCCAGTCAGGAAGGTCCAAGAGGTAGGGCACAGTaGGGAATTGCTTGTTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: SCPAWMLLFLGWPSQEGPRGRAQ*GIACLL Trigger: TAGCAAACAAGCAATTCCCCACTGTGCCCTACCTCT...TGGACCTTCCTGACTGGGCCAACCCAAGAATAGTAGCATCCAAGCAGGGCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
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| 3UTR CAA 72 bp | AGAAGTTGTAGTTGCCCTGCTTGGATGCTACTATTCTaGGGTTGGCCCAGTCAGGAAGGTCCAGGTAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RSCSCPAWMLLF*GWPSQEGPGRS Trigger: AGACCTACCTGGACCTTCCTGACTGGGCCAACCCAAGAATAGTAGCATCCAAGCAGGGCAACTACAACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | ACAGAAACAAAAAGAAGTTGTAGTTGCCCTGCTTGGATGCTACTATTCTTGGGTGGTCCCAGTGGTGCTTaGGCAAAGGGGATGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TETKRSCSCPAWMLLFLGGPSGA*AKGMPR Trigger: CCTGGGCATCCCCTTTGCTCAAGCACCACTGGGACC...ACCCAAGAATAGTAGCATCCAAGCAGGGCAACTACAACTTCTTTTTGTTTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | AAGAAACATGGGCTCACAGCAGCATGGTCCAGGCTAAAGTCTCTGAACAGAAACCAAACTCATGGTTGGTaGCTCCCAAGAGGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNQTHGW*LPRGRA Trigger: TGCCCTACCTCTTGGGAGTCACCAACCATGAGTTTG...GTTTCTGTTCAGAGACTTTAGCCTGGACCATGCTGCTGTGAGCCCATGTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
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| CDS-3UTR TCA 90 bp | AGTTGCCCTGCTTGGATGCTACTATTCTTGGGTTGGCCCAGTCAGGAAGGTCCAGGATATTCCAGAATTTaGGTAGAAGCCAGCCAAACT | + |
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Preference number: 4 (lower is better) Translates to: SCPAWMLLFLGWPSQEGPGYSRI*VEASQT Trigger: AGTTTGGCTGGCTTCTACTCAAATTCTGGAATATCC...TGGACCTTCCTGACTGGGCCAACCCAAGAATAGTAGCATCCAAGCAGGGCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
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| CDS-3UTR CCA 90 bp | AAGAAACATGGGCTCACAGCAGCATGGTCCAGGCTAAAGTCTCTGAACAGAAACCTTCTGGGGCCTTTGTaGGAAGAAGGAGTCATTGAC | + |
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Preference number: 4 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNLLGPL*EEGVID Trigger: GTCAATGACTCCTTCTTCCCACAAAGGCCCCAGAAG...GTTTCTGTTCAGAGACTTTAGCCTGGACCATGCTGCTGTGAGCCCATGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
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| CDS-3UTR CCA 90 bp | AGTTGCCCTGCTTGGATGCTACTATTCTTGGGTTGGCCCAGTCAGGAAGGTCCAGGCAGTCCTCAGAAATaGGGAAGATTTTCATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SCPAWMLLFLGWPSQEGPGSPQK*GRFSSF Trigger: AAAAGATGAAAATCTTCCCCATTTCTGAGGACTGCC...TGGACCTTCCTGACTGGGCCAACCCAAGAATAGTAGCATCCAAGCAGGGCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR CCA 90 bp | GTACCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATTCCTCTGTGGCCTCTaGGAAGGCCAGGAGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: VPYSKGSSHFRKKQQYVQFLCGL*EGQEGT Trigger: AGTTCCCTCCTGGCCTTCCCAGAGGCCACAGAGGAA...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | GTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAGGTCCCAGTGGTGCTTaGGCAAAGGGGATGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VQVTLGRNSSMFNDQEVEGPSGA*AKGMPR Trigger: CCTGGGCATCCCCTTTGCTCAAGCACCACTGGGACC...TTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | AAGAAACATGGGCTCACAGCAGCATGGTCCAGGCTAAAGTCTCTGAACAGAAACGAATTGGCAAAGTTCTaGGCTTCAGACCATGCATTC | + |
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Preference number: 4 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNELAKF*ASDHAF Trigger: GAATGCATGGTCTGAAGCTCAGAACTTTGCCAATTC...GTTTCTGTTCAGAGACTTTAGCCTGGACCATGCTGCTGTGAGCCCATGTTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR GCA 90 bp | ACAGAAACAAAAAGAAGTTGTAGTTGCCCTGCTTGGATGCTACTATTCTTGGGTAAGAGGTCCCAGTGGTaGTTGAGCAAAGGGGATGCC | + |
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Preference number: 4 (lower is better) Translates to: TETKRSCSCPAWMLLFLGKRSQW*LSKGDA Trigger: GGCATCCCCTTTGCTCAAGCACCACTGGGACCTCTT...ACCCAAGAATAGTAGCATCCAAGCAGGGCAACTACAACTTCTTTTTGTTTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR CCA 90 bp | GTACCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAACCGAAGAGGTCCCAGTaGTGCTTGAGCAAAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: VPYSKGSSHFRKKQQYVQPKRSQ*CLSKGD Trigger: ATCCCCTTTGCTCAAGCACCACTGGGACCTCTTCGG...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | ACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAAGTGCTGATCCATCATaGGATGTGGAGGAGCCAACC | + |
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Preference number: 4 (lower is better) Translates to: TARVQVTLGRNSSMFNDQSADPS*DVEEPT Trigger: GGTTGGCTCCTCCACATCTCATGATGGATCAGCACT...TTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | GTACCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAAATAGGCAGCCAGTGCTaGTCCATCATGAGATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: VPYSKGSSHFRKKQQYVQIGSQC*SIMRCG Trigger: TCCACATCTCATGATGGATCAGCACTGGCTGCCTAT...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | ACAGAAACAAAAAGAAGTTGTAGTTGCCCTGCTTGGATGCTACTATTCTTGGGTATAGGCAGCCAGTGCTaGTCCATCATGAGATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TETKRSCSCPAWMLLFLGIGSQC*SIMRCG Trigger: TCCACATCTCATGATGGATCAGCACTGGCTGCCTAT...ACCCAAGAATAGTAGCATCCAAGCAGGGCAACTACAACTTCTTTTTGTTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR GCA 90 bp | CAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAACCAAGGAGGCAGCCCCTTaGCATTGGGATTTCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: QVTLGRNSSMFNDQEVETKEAAP*HWDFLC Trigger: GCACAGGAAATCCCAATGGCAAGGGGCTGCCTCCTT...GGTTTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR CCA 90 bp | CAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAACCCCGAAGAGGTCCCAGTaGTGCTTGAGCAAAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: QVTLGRNSSMFNDQEVETPKRSQ*CLSKGD Trigger: ATCCCCTTTGCTCAAGCACCACTGGGACCTCTTCGG...GGTTTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR CCA 90 bp | ACAGAAACAAAAAGAAGTTGTAGTTGCCCTGCTTGGATGCTACTATTCTTGGGTTCACCCAGCAATTCCTaGAGGGCATACCTTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: TETKRSCSCPAWMLLFLGSPSNS*RAYLVA Trigger: AGCTACAAGGTATGCCCTCCAGGAATTGCTGGGTGA...ACCCAAGAATAGTAGCATCCAAGCAGGGCAACTACAACTTCTTTTTGTTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | CAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAACCAGACAGGAGCAGGGATaGGACAATAATGCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QVTLGRNSSMFNDQEVETRQEQG*DNNASS Trigger: GCTGGAGGCATTATTGTCTCATCCCTGCTCCTGTCT...GGTTTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR GCA 90 bp | ACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAATGACAACCCCACTCTaGGATATGGCTCTGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TARVQVTLGRNSSMFNDQMTTPL*DMALWK Trigger: CTTCCACAGAGCCATATCGCAGAGTGGGGTTGTCAT...TTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | GTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAGGCGATACTGGACAGTaGCAACTACCACATCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: VQVTLGRNSSMFNDQEVEGDTGQ*QLPHPH Trigger: ATGGGGATGTGGTAGTTGTCACTGTCCAGTATCGCC...TTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR GCA 90 bp | CAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAACCATGACAACCCCACTCTaGGATATGGCTCTGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QVTLGRNSSMFNDQEVETMTTPL*DMALWK Trigger: CTTCCACAGAGCCATATCGCAGAGTGGGGTTGTCAT...GGTTTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR GCA 90 bp | CAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAACCCATTGGGATTTCCTGTaGGTGCAAACTGGCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: QVTLGRNSSMFNDQEVETHWDFL*VQTGSI Trigger: AATGGAGCCAGTTTGCACGCACAGGAAATCCCAATG...GGTTTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | GTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAATTCTCTCTACATCCTaGAGGCACATTGGGGGATTG | + |
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Preference number: 4 (lower is better) Translates to: VQVTLGRNSSMFNDQEVEILSTS*RHIGGL Trigger: CAATCCCCCAATGTGCCTTCAGGATGTAGAGAGAAT...TTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR TCA 90 bp | CAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAACCGAATTGGCAAAGTTCTaGGCTTCAGACCATGCATTC | + |
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Preference number: 4 (lower is better) Translates to: QVTLGRNSSMFNDQEVETELAKF*ASDHAF Trigger: GAATGCATGGTCTGAAGCTCAGAACTTTGCCAATTC...GGTTTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR GCA 90 bp | GTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAACATTGGGATTTCCTGTaGGTGCAAACTGGCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: VQVTLGRNSSMFNDQEVEHWDFL*VQTGSI Trigger: AATGGAGCCAGTTTGCACGCACAGGAAATCCCAATG...TTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR CCA 90 bp | GTACCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAAGGCAGTCCTCAGAAATaGGGAAGATTTTCATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: VPYSKGSSHFRKKQQYVQGSPQK*GRFSSF Trigger: AAAAGATGAAAATCTTCCCCATTTCTGAGGACTGCC...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| 3UTR CAA 72 bp | AGCAGTATGTTCAATGATCAAGAAGTAGAAACCAGATaGGTAACATTTAGTGGTCCACCATACTGGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SSMFNDQEVETR*VTFSGPPYWSC Trigger: ACAAGACCAGTATGGTGGACCACTAAATGTTACCAATCTGGTTTCTACTTCTTGATCATTGAACATACTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS GCA 90 bp | CCAGTGGTGCTTGAGCAAAGGGGATGCCCAGGAAGACATTTACCATaGGGTCTGTGTCCTTCACACCCACCTGCCGGCCTCGAACACGAC | + |
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Preference number: 5 (lower is better) Translates to: PVVLEQRGCPGRHLP*GLCPSHPPAGLEHD Trigger: GTCGTGTTCGAGGCCGGCAGGTGGGTGTGAAGGACACAGACCGCATGGTAAATGTCTTCCTGGGCATCCCCTTTGCTCAAGCACCACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CCA 90 bp | AAGGTCCTTTCCTTCCTTCTGCAGCAAACACTGGACCAGCTCAGCTaGGGATGCAGAGCCACAGGCCACAGAATTGGCAAAGTTCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: KVLSFLLQQTLDQLS*GCRATGHRIGKVLS Trigger: GCTCAGAACTTTGCCAATTCTGTGGCCTGTGGCTCTGCATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAAGGAAGGAAAGGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS GCA 90 bp | CTTTCCTTCCTTCTGCAGCAAACACTGGACCAGCTCAGCTGGGGATaGAGAGCCACAGGCCACAGAATTGGCAAAGTTCTGAGCTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: LSFLLQQTLDQLSWG*RATGHRIGKVLSFR Trigger: TCTGAAGCTCAGAACTTTGCCAATTCTGTGGCCTGTGGCTCTGCATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAAGGAAGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CCA 90 bp | TCCAGAATCTTGCTGATGACAACCCCACTCTGCGATATGGCTCTGTaGAAGAGCCCAGCAGACATTGGAGACAGGAGCAGGGATGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SRILLMTTPLCDMAL*KSPADIGDRSRDET Trigger: TGTCTCATCCCTGCTCCTGTCTCCAATGTCTGCTGGGCTCTTCCACAGAGCCATATCGCAGAGTGGGGTTGTCATCAGCAAGATTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS CCA 90 bp | CAGAACTTCGTGATAAGGTCCTTTCCTTCCTTCTGCAGCAAACACTaGACCAGCTCAGCTGGGGATGCAGAGCCACAGGCCACAGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: QNFVIRSFPSFCSKH*TSSAGDAEPQATEL Trigger: CAATTCTGTGGCCTGTGGCTCTGCATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAAGGAAGGAAAGGACCTTATCACGAAGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093223.5 |
||
| CDS GCA 90 bp | AGTATTGTTCTAACTGGTTTAATTGGGGCCAAGGAGGCAGCCCCTTaGCATTGGGATTTCCTGTGCGTGCAAACTGGCTCCATTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SIVLTGLIGAKEAAP*HWDFLCVQTGSIGP Trigger: TGGCCCAATGGAGCCAGTTTGCACGCACAGGAAATCCCAATGGCAAGGGGCTGCCTCCTTGGCCCCAATTAAACCAGTTAGAACAATACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CCA 90 bp | ACTGGACCAGCTCAGCTGGGGATGCAGAGCCACAGGCCACAGAATTaGCAAAGTTCTGAGCTTCAGACCATGCATTCAAGTCTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TGPAQLGMQSHRPQN*QSSELQTMHSSLPE Trigger: TTCTGGAAGACTTGAATGCATGGTCTGAAGCTCAGAACTTTGCCAATTCTGTGGCCTGTGGCTCTGCATCCCCAGCTGAGCTGGTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS TCA 90 bp | TCAGCTGGGGATGCAGAGCCACAGGCCACAGAATTGGCAAAGTTCTaGGCTTCAGACCATGCATTCAAGTCTTCCAGAATCTTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SAGDAEPQATELAKF*ASDHAFKSSRILLM Trigger: CATCAGCAAGATTCTGGAAGACTTGAATGCATGGTCTGAAGCTCAGAACTTTGCCAATTCTGTGGCCTGTGGCTCTGCATCCCCAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS GCA 90 bp | GAAATGTTCACGTTTTTCTTCGTGATAAGGTCCTTTCCTTCCTTCTaGAGCAAACACTGGACCAGCTCAGCTGGGGATGCAGAGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: EMFTFFFVIRSFPSF*SKHWTSSAGDAEPQ Trigger: CTGTGGCTCTGCATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAAGGAAGGAAAGGACCTTATCACGAAGAAAAACGTGAACATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
||
| CDS CCA 90 bp | TATTCATCTATGACGGTGGGCATGATCTCAGGGGGCAGTTGCATATaGGCTAATAAGGGCCTTGAATTCTCCAACAGGTCTTCCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YSSMTVGMISGGSCI*ANKGLEFSNRSSWL Trigger: GAGCCAGGAAGACCTGTTGGAGAATTCAAGGCCCTTATTAGCCCATATGCAACTGCCCCCTGAGATCATGCCCACCGTCATAGATGAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS GCA 90 bp | TCTAGGTATTCATCTATGACGGTGGGCATGATCTCAGGGGGCAGTTaGATATGGGCTAATAAGGGCCTTGAATTCTCCAACAGGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRYSSMTVGMISGGS*IWANKGLEFSNRSS Trigger: GGAAGACCTGTTGGAGAATTCAAGGCCCTTATTAGCCCATATGCAACTGCCCCCTGAGATCATGCCCACCGTCATAGATGAATACCTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS-3UTR CAA 90 bp | GTACCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAAAGGTCCCAGTGGTGCTaGAGCAAAGGGGATGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPYSKGSSHFRKKQQYVQRSQWC*SKGDAQ Trigger: CTGGGCATCCCCTTTGCTCAAGCACCACTGGGACCT...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS-3UTR CAA 90 bp | AAGAAACATGGGCTCACAGCAGCATGGTCCAGGCTAAAGTCTCTGAACAGAAACACAGTGGGGAATTGCTaGTTTGCTAGGAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KKHGLTAAWSRLKSLNRNTVGNC*FARSFW Trigger: CCAGAAGCTCCTAGCAAACAAGCAATTCCCCACTGT...GTTTCTGTTCAGAGACTTTAGCCTGGACCATGCTGCTGTGAGCCCATGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
||
| CDS-3UTR CAA 90 bp | ACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAAGGTCCCAGTGGTGCTaGAGCAAAGGGGATGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TARVQVTLGRNSSMFNDQRSQWC*SKGDAQ Trigger: CTGGGCATCCCCTTTGCTCAAGCACCACTGGGACCT...TTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS-3UTR CAA 90 bp | ACAGAAACAAAAAGAAGTTGTAGTTGCCCTGCTTGGATGCTACTATTCTTGGGTCAAGGAGGCAGCCCCTaGCCATTGGGATTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TETKRSCSCPAWMLLFLGQGGSP*PLGFPV Trigger: CACAGGAAATCCCAATGGCAAGGGGCTGCCTCCTTG...ACCCAAGAATAGTAGCATCCAAGCAGGGCAACTACAACTTCTTTTTGTTTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CCA 90 bp | AAAAACAAAGGCATTCTCAGAGGAATGGTCAGCCTTCACCCAGGCTaGCTTGAACTTTGCAAAAGAACTGGGTGTATGCTGGAACTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: KNKGILRGMVSLHPG*LELCKRTGCMLELV Trigger: TACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGCTGACCATTCCTCTGAGAATGCCTTTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS-3UTR CAA 90 bp | CAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAACCAGAGCCCAGCAGACATaGGAGACAGGAGCAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QVTLGRNSSMFNDQEVETRAQQT*ETGAGM Trigger: CATCCCTGCTCCTGTCTCCAATGTCTGCTGGGCTCT...GGTTTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR CAA 90 bp | CAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAACCCAAGGAGGCAGCCCCTaGCCATTGGGATTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVTLGRNSSMFNDQEVETQGGSP*PLGFPV Trigger: CACAGGAAATCCCAATGGCAAGGGGCTGCCTCCTTG...GGTTTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CCA 90 bp | TGCATATGGGCTAATAAGGGCCTTGAATTCTCCAACAGGTCTTCCTaGCTCAAATGTTCCATCTTATCCAGGATATTCCAGAACTTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: CIWANKGLEFSNRSS*LKCSILSRIFQNFV Trigger: CACGAAGTTCTGGAATATCCTGGATAAGATGGAACATTTGAGCCAGGAAGACCTGTTGGAGAATTCAAGGCCCTTATTAGCCCATATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093223.5 |
||
| CDS-3UTR CAA 90 bp | GTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAAGAGCCCAGCAGACATaGGAGACAGGAGCAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VQVTLGRNSSMFNDQEVERAQQT*ETGAGM Trigger: CATCCCTGCTCCTGTCTCCAATGTCTGCTGGGCTCT...TTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS TCA 90 bp | GGTGTATGCTGGAACTCGTACAAGAAAACAGGGCACCCAGCATCTTaGAGGTATTTTGAGAAGATCAAGGTAGGAATGACCAATGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: GVCWNSYKKTGHPAS*RYFEKIKVGMTNVI Trigger: TATCACATTGGTCATTCCTACCTTGATCTTCTCAAAATACCTTCAAGATGCTGGGTGCCCTGTTTTCTTGTACGAGTTCCAGCATACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR CAA 90 bp | ACAGAAACAAAAAGAAGTTGTAGTTGCCCTGCTTGGATGCTACTATTCTTGGGTAGGGTGAATCTGCTGTaGCTCATTCTCTCTACATCC | + |
|
Preference number: 5 (lower is better) Translates to: TETKRSCSCPAWMLLFLGRVNLL*LILSTS Trigger: GGATGTAGAGAGAATGAGCAACAGCAGATTCACCCT...ACCCAAGAATAGTAGCATCCAAGCAGGGCAACTACAACTTCTTTTTGTTTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CCA 90 bp | TGCATATGGGCTAATAAGGGCCTTGAATTCTCCAACAGGTCTTCCTaGCTCAAATGTTCCATCTTATCCAGGATATTCCAGAATTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: CIWANKGLEFSNRSS*LKCSILSRIFQNLS Trigger: ACTCAAATTCTGGAATATCCTGGATAAGATGGAACATTTGAGCCAGGAAGACCTGTTGGAGAATTCAAGGCCCTTATTAGCCCATATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
||
| CDS-3UTR CAA 90 bp | GTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAGAAGTAGAAGAGCTTCTGGGGCCTTaGTGGGAAGAAGGAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: VQVTLGRNSSMFNDQEVEELLGP*WEEGVI Trigger: AATGACTCCTTCTTCCCACAAAGGCCCCAGAAGCTC...TTCTACTTCTTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
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| CDS-3UTR CAA 90 bp | ACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAATGATCAAAGGATATTCCAGAATTaGAGTAGAAGCCAGCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TARVQVTLGRNSSMFNDQRIFQN*SRSQPN Trigger: GTTTGGCTGGCTTCTACTCAAATTCTGGAATATCCT...TTGATCATTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
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| CDS-3UTR CAA 90 bp | GTACCATACAGCAAGGGTTCAAGTCACTTTAGGAAGAAACAGCAGTATGTTCAAGATTCATCTGAGCCATaGTCTAGGTATTCATCTATG | + |
|
Preference number: 5 (lower is better) Translates to: VPYSKGSSHFRKKQQYVQDSSEP*SRYSSM Trigger: CATAGATGAATACCTAGACAATGGCTCAGATGAATC...TTGAACATACTGCTGTTTCTTCCTAAAGTGACTTGAACCCTTGCTGTATGGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS-3UTR CAA 90 bp | ATGTTCAATGATCAAGAAGTAGAAACCAGATTGGTAACATTTAGTGGTCCACCAGATTCATCTGAGCCATaGTCTAGGTATTCATCTATG | + |
|
Preference number: 5 (lower is better) Translates to: MFNDQEVETRLVTFSGPPDSSEP*SRYSSM Trigger: CATAGATGAATACCTAGACAATGGCTCAGATGAATC...TGGTGGACCACTAAATGTTACCAATCTGGTTTCTACTTCTTGATCATTGAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CAA 90 bp | CAGCCCCTTGCCATTGGGATTTCCTGTGCGTGCAAACTGGCTCCATaGGGCCATCATGGTCAGGCTCAGCTGCTTCTCTTCCTCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QPLAIGISCACKLAP*GHHGQAQLLLFLCG Trigger: GCCACAGAGGAAGAGAAGCAGCTGAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCACAGGAAATCCCAATGGCAAGGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CCA 72 bp | AGCCCCTTGCCATTGGGATTTCCTGTGCGTGCAAACTaGCTCCATTGGGCCATCATGGTCAGGCTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPLPLGFPVRAN*LHWAIMVRLSC Trigger: GCAGCTGAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCACAGGAAATCCCAATGGCAAGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CCA 72 bp | GGTTTAATTGGGGCCAAGGAGGCAGCCCCTTGCCATTaGGATTTCCTGTGCGTGCAAACTGGCTCCATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLIGAKEAAPCH*DFLCVQTGSIG Trigger: CCCAATGGAGCCAGTTTGCACGCACAGGAAATCCCAATGGCAAGGGGCTGCCTCCTTGGCCCCAATTAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS GCA 72 bp | ACCGAAGAGGTCCCAGTGGTGCTTGAGCAAAGGGGATaGCCAGGAAGACATTTACCATGCGGTCTGTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TEEVPVVLEQRG*PGRHLPCGLCP Trigger: AGGACACAGACCGCATGGTAAATGTCTTCCTGGGCATCCCCTTTGCTCAAGCACCACTGGGACCTCTTCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS GCA 72 bp | CTAACTGGTTTAATTGGGGCCAAGGAGGCAGCCCCTTaGCATTGGGATTTCCTGTGCGTGCAAACTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LTGLIGAKEAAP*HWDFLCVQTGS Trigger: GGAGCCAGTTTGCACGCACAGGAAATCCCAATGGCAAGGGGCTGCCTCCTTGGCCCCAATTAAACCAGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CCA 72 bp | TCCTTCCTTCTGCAGCAAACACTGGACCAGCTCAGCTaGGGATGCAGAGCCACAGGCCACAGAATTGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SFLLQQTLDQLS*GCRATGHRIGK Trigger: TTTGCCAATTCTGTGGCCTGTGGCTCTGCATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAAGGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CAA 72 bp | CTCCCAAGAGGTAGGGCACAGTGGGGAATTGCTTGTTaGCTAGGAGCTTCTGGGGCCTTTGTGGGAAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPRGRAQWGIAC*LGASGAFVGRR Trigger: CCTTCTTCCCACAAAGGCCCCAGAAGCTCCTAGCAAACAAGCAATTCCCCACTGTGCCCTACCTCTTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
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| CDS CAA 72 bp | GCCATTGGGATTTCCTGTGCGTGCAAACTGGCTCCATaGGGCCATCATGGTCAGGCTCAGCTGCTTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AIGISCACKLAP*GHHGQAQLLLF Trigger: GAAGAGAAGCAGCTGAGCCTGACCATGATGGCCCAATGGAGCCAGTTTGCACGCACAGGAAATCCCAATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS TCA 72 bp | TGGCCTCTGGGAAGGCCAGGAGGGAACTCTCATCAGTaGGGAAAGGACCTCCAAAAACAAAGGCATTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: WPLGRPGGNSHQ*GKDLQKQRHSQ Trigger: CTGAGAATGCCTTTGTTTTTGGAGGTCCTTTCCTCACTGATGAGAGTTCCCTCCTGGCCTTCCCAGAGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CCA 72 bp | GGCACAGTGGGGAATTGCTTGTTTGCTAGGAGCTTCTaGGGCCTTTGTGGGAAGAAGGAGTCATTGACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GTVGNCLFARSF*GLCGKKESLTV Trigger: CACAGTCAATGACTCCTTCTTCCCACAAAGGCCCCAGAAGCTCCTAGCAAACAAGCAATTCCCCACTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
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| CDS GCA 72 bp | TTCCAGAACTTCGTGATAAGGTCCTTTCCTTCCTTCTaGAGCAAACACTGGACCAGCTCAGCTGGGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: FQNFVIRSFPSF*SKHWTSSAGDA Trigger: TGCATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAAGGAAGGAAAGGACCTTATCACGAAGTTCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093223.5 |
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| CDS CCA 72 bp | ATGACGGTGGGCATGATCTCAGGGGGCAGTTGCATATaGGCTAATAAGGGCCTTGAATTCTCCAACAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: MTVGMISGGSCI*ANKGLEFSNRS Trigger: AGACCTGTTGGAGAATTCAAGGCCCTTATTAGCCCATATGCAACTGCCCCCTGAGATCATGCCCACCGTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CAA 90 bp | AGCAATTCCTGGAGGGCATACCTTGTAGCTGATTCATCTGAGCCATaGTCTAGGTATTCATCTATGACGGTGGGCATGATCTCAGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SNSWRAYLVADSSEP*SRYSSMTVGMISGG Trigger: GCCCCCTGAGATCATGCCCACCGTCATAGATGAATACCTAGACAATGGCTCAGATGAATCAGCTACAAGGTATGCCCTCCAGGAATTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS TCA 72 bp | AGGGTGAATCTGCTGTTGCTCATTCTCTCTACATCCTaGAGGCACATTGGGGGATTGATGCTGGCATCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RVNLLLLILSTS*RHIGGLMLASL Trigger: GAGAGATGCCAGCATCAATCCCCCAATGTGCCTTCAGGATGTAGAGAGAATGAGCAACAGCAGATTCACCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS GCA 72 bp | ACGTTTTTCTTCGTGATAAGGTCCTTTCCTTCCTTCTaGAGCAAACACTGGACCAGCTCAGCTGGGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: TFFFVIRSFPSF*SKHWTSSAGDA Trigger: TGCATCCCCAGCTGAGCTGGTCCAGTGTTTGCTGCAGAAGGAAGGAAAGGACCTTATCACGAAGAAAAACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
||
| CDS GCA 72 bp | TCATCTATGACGGTGGGCATGATCTCAGGGGGCAGTTaGATATGGGCTAATAAGGGCCTTGAATTCTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSMTVGMISGGS*IWANKGLEFSN Trigger: GTTGGAGAATTCAAGGCCCTTATTAGCCCATATGCAACTGCCCCCTGAGATCATGCCCACCGTCATAGATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS GCA 72 bp | GGAATGGTCAGCCTTCACCCAGGCTGGCTTGAACTTTaGAAAAGAACTGGGTGTATGCTGGAACTCGTACAA | + |
|
Preference number: 6 (lower is better) Translates to: GMVSLHPGWLEL*KRTGCMLELVQ Trigger: TTGTACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGCCTGGGTGAAGGCTGACCATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS CAA 72 bp | TGCTTCTCTGCTCTCGGTGCCATTCTTGAATTTTTCTaGGCAGTGTCTCTGTCCAGAACTGTAGCCGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: CFSALGAILEFF*AVSLSRTVADP Trigger: AGGGTCGGCTACAGTTCTGGACAGAGACACTGCCAAGAAAAATTCAAGAATGGCACCGAGAGCAGAGAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS CCA 72 bp | GCTGGCTTGAACTTTGCAAAAGAACTGGGTGTATGCTaGAACTCGTACAAGAAAACAGGGCACCCAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: AGLNFAKELGVC*NSYKKTGHPAS Trigger: AGATGCTGGGTGCCCTGTTTTCTTGTACGAGTTCCAGCATACACCCAGTTCTTTTGCAAAGTTCAAGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS CAA 72 bp | TCTCAGGGGGCAGTTGCATATGGGCTAATAAGGGCCTaGAATTCTCCAACAGGTCTTCCTGGCTCAAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: SQGAVAYGLIRA*NSPTGLPGSNV Trigger: AACATTTGAGCCAGGAAGACCTGTTGGAGAATTCAAGGCCCTTATTAGCCCATATGCAACTGCCCCCTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS CCA 72 bp | GTAGGAATGACCAATGTGATATCACCCAGCAATTCCTaGAGGGCATACCTTGTAGCTGATTCATCTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VGMTNVISPSNS*RAYLVADSSEP Trigger: TGGCTCAGATGAATCAGCTACAAGGTATGCCCTCCAGGAATTGCTGGGTGATATCACATTGGTCATTCCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS CCA 72 bp | AGACCAATCTCCAAGTATTGTTCTAACTGGTTTAATTaGGGCCAAGGAGGCAGCCCCTTGCCATTGGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: RPISKYCSNWFN*GQGGSPLPLGF Trigger: AAATCCCAATGGCAAGGGGCTGCCTCCTTGGCCCCAATTAAACCAGTTAGAACAATACTTGGAGATTGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
||
| CDS CAA 72 bp | TGGAGGGCATACCTTGTAGCTGATTCATCTGAGCCATaGTCTAGGTATTCATCTATGACGGTGGGCATGATC | + |
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Preference number: 6 (lower is better) Translates to: WRAYLVADSSEP*SRYSSMTVGMI Trigger: GATCATGCCCACCGTCATAGATGAATACCTAGACAATGGCTCAGATGAATCAGCTACAAGGTATGCCCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CAA 72 bp | TGGAACTTTCCTGCTTCTCTGCTCTCGGTGCCATTCTaGAATTTTTCTTGGCAGTGTCTCTGTCCAGAACTG | + |
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Preference number: 6 (lower is better) Translates to: WNFPASLLSVPF*NFSWQCLCPEL Trigger: CAGTTCTGGACAGAGACACTGCCAAGAAAAATTCAAGAATGGCACCGAGAGCAGAGAAGCAGGAAAGTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS GCA 72 bp | GGCCACAGAATTGGCAAAGTTCTGAGCTTCAGACCATaGATTCAAGTCTTCCAGAATCTTGCTGATGACAAC | + |
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Preference number: 6 (lower is better) Translates to: GHRIGKVLSFRP*IQVFQNLADDN Trigger: GTTGTCATCAGCAAGATTCTGGAAGACTTGAATGCATGGTCTGAAGCTCAGAACTTTGCCAATTCTGTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS TCA 72 bp | TGGAACTCGTACAAGAAAACAGGGCACCCAGCATCTTaGAGGTATTTTGAGAAGATCAAGGTAGGAATGACC | + |
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Preference number: 6 (lower is better) Translates to: WNSYKKTGHPAS*RYFEKIKVGMT Trigger: GGTCATTCCTACCTTGATCTTCTCAAAATACCTTCAAGATGCTGGGTGCCCTGTTTTCTTGTACGAGTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CCA 72 bp | GCTAATAAGGGCCTTGAATTCTCCAACAGGTCTTCCTaGCTCAAATGTTCCATCTTATCCAGGATATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ANKGLEFSNRSS*LKCSILSRIFQ Trigger: CTGGAATATCCTGGATAAGATGGAACATTTGAGCCAGGAAGACCTGTTGGAGAATTCAAGGCCCTTATTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093222.13 ENSMUST00000093223.5 |
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| CDS CAA 72 bp | CTCAAATGTTCCATCTTATCCAGGATATTCCAGAATTaGAGTAGAAGCCAGCCAAACTCATGGTTGGTGACT | + |
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Preference number: 6 (lower is better) Translates to: LKCSILSRIFQN*SRSQPNSWLVT Trigger: AGTCACCAACCATGAGTTTGGCTGGCTTCTACTCAAATTCTGGAATATCCTGGATAAGATGGAACATTTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093222.13 |
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