Pregenerated sensors for CES2E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031886Ensembl transcript IDs: ENSMUST00000034355.11, ENSMUST00000109410.4
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGAATGTTCAGTGGCTGACATCAGAGGTCTAGTAGCTGAGCCCTaGAAGACTGTATGGCTCAAGTTCATTTTCTCACCCTCTATTTCT | + |
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Preference number: 1 (lower is better) Translates to: LECSVADIRGLVAEP*KTVWLKFIFSPSIS Trigger: AGAAATAGAGGGTGAGAAAATGAACTTGAGCCATACAGTCTTTCAGGGCTCAGCTACTAGACCTCTGATGTCAGCCACTGAACATTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR GCA 90 bp | AGGTCTTGCTATGTTGTCCATGGTGGTATGGAACTACTAGGCTCATaGAACATCCCTGACTTAGTTTCTAAATATTCAGGTCCACTAGAT | + |
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Preference number: 1 (lower is better) Translates to: RSCYVVHGGMELLGS*NIPDLVSKYSGPLD Trigger: ATCTAGTGGACCTGAATATTTAGAAACTAAGTCAGGGATGTTGCATGAGCCTAGTAGTTCCATACCACCATGGACAACATAGCAAGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR GCA 90 bp | CATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTaGTATACATATCCGGGGATTCTTTTCTCTTCTATATCATCTCTA | + |
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Preference number: 1 (lower is better) Translates to: HTWRSHQGAKDRNLF*YTYPGILFSSISSL Trigger: TAGAGATGATATAGAAGAGAAAAGAATCCCCGGATATGTATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| 3UTR CCA 90 bp | ATCTACTTGGAACAGCATTCAGAACTTGTGGAGACTATGGGAACTTaGGGCTCCTACATCCATATTCCACATTGTTACAGAAGCTTTTAT | + |
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Preference number: 1 (lower is better) Translates to: IYLEQHSELVETMGT*GSYIHIPHCYRSFY Trigger: ATAAAAGCTTCTGTAACAATGTGGAATATGGATGTAGGAGCCCCAAGTTCCCATAGTCTCCACAAGTTCTGAATGCTGTTCCAAGTAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR-3UTR GCA 90 bp | AGGCAAGAAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAGACATGAAGCCCACATaGCTTTCTTCACACAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RQEVTSIHGEAIRVPRTEDMKPT*LSSHRA Trigger: TGCCCTGTGTGAAGAAAGGCATGTGGGCTTCATGTC...TTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTTCTTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| 3UTR CAA 90 bp | TGTGGGCTTCACAGTGTCTGCAGAATCCCTGTGCGTAAAAGCAATTaGTTATTAGAGAAAGCCTACTTGGGCCTGCTGGTCAACCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: CGLHSVCRIPVRKSN*LLEKAYLGLLVNPH Trigger: ATGGGGGTTGACCAGCAGGCCCAAGTAGGCTTTCTCTAATAACAAATTGCTTTTACGCACAGGGATTCTGCAGACACTGTGAAGCCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR-3UTR CCA 90 bp | CAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCCCTGGTCAACCCCCATTCTTaGCCTTGCTTGAGGTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: QMCYVHINVGFTVSAESLVNPHS*PCLRCL Trigger: TAGACACCTCAAGCAAGGCCAAGAATGGGGGTTGAC...CAGGGATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR CAA 90 bp | GTTATTAGAGAAAGCCTACTTGGGCCTGCTGGTCAACCCCCATTCTaGGCCTTGCTTGAGGTGTCTATAAACATACCAAGTCAAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: VIRESLLGPAGQPPF*ALLEVSINIPSQAF Trigger: AAAAGCTTGACTTGGTATGTTTATAGACACCTCAAGCAAGGCCAAGAATGGGGGTTGACCAGCAGGCCCAAGTAGGCTTTCTCTAATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR-3UTR GCA 90 bp | CATAGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAAAGCCTACTTGGGCCTaGTGGTCAACCCCCATTCTT | + |
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Preference number: 2 (lower is better) Translates to: HSQRSLQMCYVHINVGFTKPTWA*WSTPIL Trigger: AAGAATGGGGGTTGACCAGCAGGCCCAAGTAGGCTT...TGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR-3UTR TCA 90 bp | TTGGCCTTGCTTGAGGTGTCTATAAACATACCAAGTCAAGCTTTTCACAAAAGTCTAGTAGCTGAGCCCTaGAAGACTGTATGGCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: LALLEVSINIPSQAFHKSLVAEP*KTVWLK Trigger: CTTGAGCCATACAGTCTTTCAGGGCTCAGCTACTAG...ACTTTTGTGAAAAGCTTGACTTGGTATGTTTATAGACACCTCAAGCAAGGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR CAA 90 bp | GATCTACTTGGAACAGCATTCAGAACTTGTGGAGACTATGGGAACTaGGGGCTCCTACATCCATATTCCACATTGTTACAGAAGCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: DLLGTAFRTCGDYGN*GLLHPYSTLLQKLL Trigger: TAAAAGCTTCTGTAACAATGTGGAATATGGATGTAGGAGCCCCAAGTTCCCATAGTCTCCACAAGTTCTGAATGCTGTTCCAAGTAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGCTATACATATCCGGGGATTCTTTTCTCTTCTATATCATCTCTAGAACATTGAGTTACAGGTCTTaGTATGTTGTCCATGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: LLLYISGDSFLFYIISRTLSYRS*YVVHGG Trigger: ACCACCATGGACAACATAGCAAGACCTGTAACTCAA...TGTTCTAGAGATGATATAGAAGAGAAAAGAATCCCCGGATATGTATAGCAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR-3UTR CCA 90 bp | CTATTTCTCATACCACAGAACTTTACATACATTTCTGTTGTTTGCAAGTTACCCTTGCTATGTTGTCCATaGTGGTATGGAACTACTAGG | + |
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Preference number: 2 (lower is better) Translates to: LFLIPQNFTYISVVCKLPLLCCP*WYGTTR Trigger: CCTAGTAGTTCCATACCACCATGGACAACATAGCAA...GGGTAACTTGCAAACAACAGAAATGTATGTAAAGTTCTGTGGTATGAGAAATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR CAA 90 bp | TTCTCTTCTATATCATCTCTAGAACACAATCATAGCCAAAGATCTTaGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: FSSISSLEHNHSQRS*QMCYVHINVGFTVS Trigger: AGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATGATTGTGTTCTAGAGATGATATAGAAGAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| 3UTR TCA 72 bp | TCAGTGGCTGACATCAGAGGTCTAGTAGCTGAGCCCTaGAAGACTGTATGGCTCAAGTTCATTTTCTCACCC | + |
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Preference number: 3 (lower is better) Translates to: SVADIRGLVAEP*KTVWLKFIFSP Trigger: GGGTGAGAAAATGAACTTGAGCCATACAGTCTTTCAGGGCTCAGCTACTAGACCTCTGATGTCAGCCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR GCA 72 bp | AAGAAGTCACTTCCATACATGGAGAAGCCATCAGGGTaGCAAGGACAGAAATCTCTTCTGCTATACATATCC | + |
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Preference number: 3 (lower is better) Translates to: KKSLPYMEKPSG*QGQKSLLLYIS Trigger: GGATATGTATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| 3UTR CCA 72 bp | AGTTTGAGATCTACTTGGAACAGCATTCAGAACTTGTaGAGACTATGGGAACTTGGGGCTCCTACATCCATA | + |
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Preference number: 3 (lower is better) Translates to: SLRSTWNSIQNL*RLWELGAPTSI Trigger: TATGGATGTAGGAGCCCCAAGTTCCCATAGTCTCCACAAGTTCTGAATGCTGTTCCAAGTAGATCTCAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR CCA 72 bp | TCTGTTATTGAGTTACAGGTCTTGCTATGTTGTCCATaGTGGTATGGAACTACTAGGCTCATGCAACATCCC | + |
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Preference number: 3 (lower is better) Translates to: SVIELQVLLCCP*WYGTTRLMQHP Trigger: GGGATGTTGCATGAGCCTAGTAGTTCCATACCACCATGGACAACATAGCAAGACCTGTAACTCAATAACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR GCA 72 bp | AGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTaGTATACATATCCGGGGATTCTTTTCTCTTCTATA | + |
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Preference number: 3 (lower is better) Translates to: RSHQGAKDRNLF*YTYPGILFSSI Trigger: TATAGAAGAGAAAAGAATCCCCGGATATGTATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| 3UTR-3UTR CAA 90 bp | TTGGCCTTGCTTGAGGTGTCTATAAACATACCAAGTCAAGCTTTTCACAAAAGTGGCTCTAACAAGAGATaGTCAGCATTTTGTGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: LALLEVSINIPSQAFHKSGSNKR*SAFCEG Trigger: TCCTTCACAAAATGCTGACAATCTCTTGTTAGAGCC...ACTTTTGTGAAAAGCTTGACTTGGTATGTTTATAGACACCTCAAGCAAGGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR TCA 72 bp | TTTGCAAGTTACCCAGCTAGTGATTATTTCTGTTATTaGGTTACAGGTCTTGCTATGTTGTCCATGGTGGTA | + |
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Preference number: 3 (lower is better) Translates to: FASYPASDYFCY*VTGLAMLSMVV Trigger: TACCACCATGGACAACATAGCAAGACCTGTAACTCAATAACAGAAATAATCACTAGCTGGGTAACTTGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| 3UTR TCA 72 bp | GCTCTAACAAGAGATTGTCAGCATTTTGTGAAGGAGTaGCATGTAAAGGGTTTGTCATATAAATTGGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: ALTRDCQHFVKE*HVKGLSYKLVK Trigger: TTTTACCAATTTATATGACAAACCCTTTACATGTCACTCCTTCACAAAATGCTGACAATCTCTTGTTAGAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| CDS-3UTR TCA 90 bp | CACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCCCTGATGGGGCTGGCTaGGTCCTGACCTTGCACATG | + |
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Preference number: 4 (lower is better) Translates to: HFHTWRSHQGAKDRNLFCPDGAG*VLTLHM Trigger: CATGTGCAAGGTCAGGACTCAGCCAGCCCCATCAGG...GCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR TCA 90 bp | AGGCAAGAAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAACCTGATGGGGCTGGCTaGGTCCTGACCTTGCACATG | + |
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Preference number: 4 (lower is better) Translates to: RQEVTSIHGEAIRVPRTEPDGAG*VLTLHM Trigger: CATGTGCAAGGTCAGGACTCAGCCAGCCCCATCAGG...TTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTTCTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR TCA 90 bp | AGGCAAGAAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAGCACATCAGGGTCTCTaGGTTCACAGCTGCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: RQEVTSIHGEAIRVPRTEAHQGL*VHSCTA Trigger: GGCTGTGCAGCTGTGAACTCAGAGACCCTGATGTGC...TTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTTCTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | GAAAGGCAAGAAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAACACCCAGGCGGTACTaGATAGCGACCACCACCACA | + |
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Preference number: 4 (lower is better) Translates to: ERQEVTSIHGEAIRVPRTTPRRY*IATTTT Trigger: TGTGGTGGTGGTCGCTATCCAGTACCGCCTGGGTGT...TGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTTCTTGCCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | GAAAGGCAAGAAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACACGAAGGGCAGCCACTTaGTCCAGGTATCCCCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: ERQEVTSIHGEAIRVPRTRRAAT*SRYPQL Trigger: CAACTGGGGATACCTGGACCAAGTGGCTGCCCTTCG...TGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTTCTTGCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | CACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCGTAGACCCTCACTGTTaGGGTTCCCGTGCCGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: HFHTWRSHQGAKDRNLFCVDPHC*GSRAVQ Trigger: TTGCACGGCACGGGAACCCCAACAGTGAGGGTCTAC...GCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | ACAGTGTCTGCAGAATCCCTCAGACATGAAGCCCACATGCCTTTCTTCACACAGCGACCCACAGAAGGCTaGATGTCCAGCTGCAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: TVSAESLRHEAHMPFFTQRPTEG*MSSCRY Trigger: GTACCTGCAGCTGGACATCCAGCCTTCTGTGGGTCG...CTGTGTGAAGAAAGGCATGTGGGCTTCATGTCTGAGGGATTCTGCAGACACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | AGGCAAGAAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAAGAACTGCAGCCTTCTaGCCTTCAGGGCTCGACCCA | + |
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Preference number: 4 (lower is better) Translates to: RQEVTSIHGEAIRVPRTERTAAF*PSGLDP Trigger: TGGGTCGAGCCCTGAAGGCCAGAAGGCTGCAGTTCT...TTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTTCTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | GAAAGGCAAGAAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACACCATGGAAGAGTCCCTaGGACATGGGGGACACAACA | + |
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Preference number: 4 (lower is better) Translates to: ERQEVTSIHGEAIRVPRTPWKSP*DMGDTT Trigger: TGTTGTGTCCCCCATGTCCCAGGGACTCTTCCATGG...TGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTTCTTGCCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | GAAAGGCAAGAAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACATGCTTGCAGAGTCTCTaGGTCCTCAGTGTCCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: ERQEVTSIHGEAIRVPRTCLQSL*VLSVPH Trigger: ATGGGGGACACTGAGGACCCAGAGACTCTGCAAGCA...TGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTTCTTGCCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | TGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATACATATCCGAGAACTGCAGCCTTCTaGCCTTCAGGGCTCGACCCA | + |
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Preference number: 4 (lower is better) Translates to: WRSHQGAKDRNLFCYTYPRTAAF*PSGLDP Trigger: TGGGTCGAGCCCTGAAGGCCAGAAGGCTGCAGTTCT...CGGATATGTATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR TCA 90 bp | AGGCAAGAAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAACTCTCCAAAAATGGTaGCTCGGTCAGGGTTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RQEVTSIHGEAIRVPRTETLQKW*LGQGCL Trigger: GAGGCAACCCTGACCGAGTCACCATTTTTGGAGAGT...TTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTTCTTGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR TCA 90 bp | ATGGTAGGGTCAAAAAGCTTTCCAAACCTCAGACATGAAGCCCACATGCCTTTCGCACATCAGGGTCTCTaGGTTCACAGCTGCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: MVGSKSFPNLRHEAHMPFAHQGL*VHSCTA Trigger: GGCTGTGCAGCTGTGAACTCAGAGACCCTGATGTGC...GAAAGGCATGTGGGCTTCATGTCTGAGGTTTGGAAAGCTTTTTGACCCTACCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| CDS-3UTR TCA 90 bp | GAAAGGCAAGAAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAATGCTGGGGACAGGGTaGAAATCCTTAGAGGCCATC | + |
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Preference number: 4 (lower is better) Translates to: ERQEVTSIHGEAIRVPRTMLGTG*KSLEAI Trigger: GATGGCCTCTAAGGATTTTCACCCTGTCCCCAGCAT...TGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTTCTTGCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR GCA 90 bp | ATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATACATATCCTCACGTGGACAAGGCTaGCTCTCACCTGGCCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: MEKPSGCQGQKSLLLYISSRGQG*LSPGLC Trigger: ACACAGGCCAGGTGAGAGGCAGCCTTGTCCACGTGA...GGATATGTATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | GTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTATCCCCAGTTGCCTTTaGCATGCTGGTCTCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: VTSIHGEAIRVPRTEISSIPSCL*HAGLQC Trigger: GCACTGGAGACCAGCATGCCAAAGGCAACTGGGGAT...AGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | CACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCAGAGTCCCTGGGACATaGGGGACACAACATGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: HFHTWRSHQGAKDRNLFCRVPGT*GTQHVK Trigger: CTTCACATGTTGTGTCCCCCATGTCCCAGGGACTCT...GCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | TGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATACATATCCGAGCTCCTGGATCTTCTaGGGCAGAGTCTTGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: WRSHQGAKDRNLFCYTYPSSWIF*GRVLVQ Trigger: CTGGACCAAGACTCTGCCCCAGAAGATCCAGGAGCT...CGGATATGTATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR TCA 90 bp | ATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCCCTCAGAGGGCTGGCTGAGTCCTaGCCTTGCACATGCAGAACG | + |
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Preference number: 4 (lower is better) Translates to: MCYVHINVGFTVSAESLRGLAES*PCTCRT Trigger: CGTTCTGCATGTGCAAGGTCAGGACTCAGCCAGCCC...TCTGAGGGATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | CATAGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACACCTCACCCCACTCCATaGCTCAGGGGCCTCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HSQRSLQMCYVHINVGFTPHPTP*LRGLRR Trigger: CCTCCTGAGGCCCCTGAGCCATGGAGTGGGGTGAGG...TGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | TGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATACATATCCGTCCATGATGGCACCATaGAAGAGTCCCTGGGACATG | + |
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Preference number: 4 (lower is better) Translates to: WRSHQGAKDRNLFCYTYPSMMAP*KSPWDM Trigger: CATGTCCCAGGGACTCTTCCATGGTGCCATCATGGA...CGGATATGTATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CCA 90 bp | ACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATACATATGTAGACCCTCACTGTTaGGGTTCCCGTGCCGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: TWRSHQGAKDRNLFCYTYVDPHC*GSRAVQ Trigger: TTGCACGGCACGGGAACCCCAACAGTGAGGGTCTAC...ATATGTATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| 3UTR CAA 72 bp | GAAAGCCTACTTGGGCCTGCTGGTCAACCCCCATTCTaGGCCTTGCTTGAGGTGTCTATAAACATACCAAGT | + |
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Preference number: 4 (lower is better) Translates to: ESLLGPAGQPPF*ALLEVSINIPS Trigger: ACTTGGTATGTTTATAGACACCTCAAGCAAGGCCAAGAATGGGGGTTGACCAGCAGGCCCAAGTAGGCTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
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| CDS-3UTR TCA 90 bp | TCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATACTACTCCACTCTCCATaGTGGCACCATGGAAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SIHGEAIRVPRTEISSAILLHSP*WHHGRV Trigger: GACTCTTCCATGGTGCCATCATGGAGAGTGGAGTAG...TATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGCTTTCCAAACCTCAGACATGAAGCCCACATGCCTTTCTTCACACAGGGCCATGCCAACAGTGAGTaGACCACCATGGATCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: KSFPNLRHEAHMPFFTQGHANSE*TTMDPY Trigger: GTATGGATCCATGGTGGTGCACTCACTGTTGGCATG...GCCCTGTGTGAAGAAAGGCATGTGGGCTTCATGTCTGAGGTTTGGAAAGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCTATACATATCCGGGGATTCTTTTCTCTTCTATATCATCTCTAGAACACCTCACCCCACTCCATaGCTCAGGGGCCTCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLYISGDSFLFYIISRTPHPTP*LRGLRR Trigger: CCTCCTGAGGCCCCTGAGCCATGGAGTGGGGTGAGG...TGTTCTAGAGATGATATAGAAGAGAAAAGAATCCCCGGATATGTATAGCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | TTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCCCGACCCACAGAAGGCTaGATGTCCAGCTGCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LQMCYVHINVGFTVSAESRPTEG*MSSCRY Trigger: GTACCTGCAGCTGGACATCCAGCCTTCTGTGGGTCG...GGATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR TCA 90 bp | TTGGCCTTGCTTGAGGTGTCTATAAACATACCAAGTCAAGCTTTTCACAAAAGTGGGCTGGCTGAGTCCTaGCCTTGCACATGCAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: LALLEVSINIPSQAFHKSGLAES*PCTCRT Trigger: CGTTCTGCATGTGCAAGGTCAGGACTCAGCCAGCCC...ACTTTTGTGAAAAGCTTGACTTGGTATGTTTATAGACACCTCAAGCAAGGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR TCA 90 bp | TCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATAATTCCCAGGAAGGTATaGACAGCGATGTCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIHGEAIRVPRTEISSAIIPRKV*TAMSVS Trigger: GGACACTGACATCGCTGTTCATACCTTCCTGGGAAT...TATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | TGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATACATATCCGCACATCCTCAGTTGCTaGCAGCATGGATCCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: WRSHQGAKDRNLFCYTYPHILSC*QHGSII Trigger: TATGATGGATCCATGCTGGCAGCAACTGAGGATGTG...CGGATATGTATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | ATGGTAGGGTCAAAAAGCTTTCCAAACCTCAGACATGAAGCCCACATGCCTTTCGTGAGTGCACCACCATaGATCCATACCATCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MVGSKSFPNLRHEAHMPFVSAPP*IHTITG Trigger: ACCTGTGATGGTATGGATCCATGGTGGTGCACTCAC...GAAAGGCATGTGGGCTTCATGTCTGAGGTTTGGAAAGCTTTTTGACCCTACCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR CCA 90 bp | CAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCCCTGAGAGTCCCTGGGACATaGGGGACACAACATGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QMCYVHINVGFTVSAESLRVPGT*GTQHVK Trigger: CTTCACATGTTGTGTCCCCCATGTCCCAGGGACTCT...CAGGGATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCAAGAAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAAGCCTTCACATAGGGTaGCCTGAAATCCTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ERQEVTSIHGEAIRVPRTSLHIG*PEILEE Trigger: TTCTTCAAGGATTTCAGGCCACCCTATGTGAAGGCT...TGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTTCTTGCCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | AAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCGTGCCGTGCAAAGTTaGCCCAGTACTTCATTATCC | + |
|
Preference number: 4 (lower is better) Translates to: KSLPYMEKPSGCQGQKSLRAVQS*PSTSLS Trigger: GGATAATGAAGTACTGGGCCAACTTTGCACGGCACG...AAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | TCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATACGTGCCGTGCAAAGTTaGCCCAGTACTTCATTATCC | + |
|
Preference number: 4 (lower is better) Translates to: SIHGEAIRVPRTEISSAIRAVQS*PSTSLS Trigger: GGATAATGAAGTACTGGGCCAACTTTGCACGGCACG...TATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR TCA 90 bp | AGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGAAGCCATGCCAACAGTaGGTGCACCACCATGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SQRSLQMCYVHINVGFTVKPCQQ*VHHHGS Trigger: GGATCCATGGTGGTGCACTCACTGTTGGCATGGCTT...CACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR TCA 90 bp | TTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCTCTTTGTGCCTCTCCTaGGACCCCTTTAGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FADVLCSHKCGLHSVCRISLCLS*DPFSSW Trigger: CCAGGAGCTAAAGGGGTCTCAGGAGAGGCACAAAGA...GATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | TTGGCCTTGCTTGAGGTGTCTATAAACATACCAAGTCAAGCTTTTCACAAAAGTTCACGTGGACAAGGCTaGCTCTCACCTGGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LALLEVSINIPSQAFHKSSRGQG*LSPGLC Trigger: ACACAGGCCAGGTGAGAGGCAGCCTTGTCCACGTGA...ACTTTTGTGAAAAGCTTGACTTGGTATGTTTATAGACACCTCAAGCAAGGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR CCA 90 bp | AGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGATCCCCAGTTGCCTTTaGCATGCTGGTCTCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQRSLQMCYVHINVGFTVIPSCL*HAGLQC Trigger: GCACTGGAGACCAGCATGCCAAAGGCAACTGGGGAT...CACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | CAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTCGAAGGGCAGCCACTTaGTCCAGGTATCCCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QRSLQMCYVHINVGFTVSRRAAT*SRYPQL Trigger: CAACTGGGGATACCTGGACCAAGTGGCTGCCCTTCG...AGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| 3UTR CAA 72 bp | GGTAGTTTGAGATCTACTTGGAACAGCATTCAGAACTaGTGGAGACTATGGGAACTTGGGGCTCCTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: GSLRSTWNSIQN*WRLWELGAPTS Trigger: GGATGTAGGAGCCCCAAGTTCCCATAGTCTCCACAAGTTCTGAATGCTGTTCCAAGTAGATCTCAAACTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| 3UTR CAA 72 bp | CACAGTGTCTGCAGAATCCCTGTGCGTAAAAGCAATTaGTTATTAGAGAAAGCCTACTTGGGCCTGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSVCRIPVRKSN*LLEKAYLGLLV Trigger: GACCAGCAGGCCCAAGTAGGCTTTCTCTAATAACAAATTGCTTTTACGCACAGGGATTCTGCAGACACTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR TCA 90 bp | AAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCCTACTCCACTCTCCATaGTGGCACCATGGAAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KIFADVLCSHKCGLHSVCLLHSP*WHHGRV Trigger: GACTCTTCCATGGTGCCATCATGGAGAGTGGAGTAG...GCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCCCTCAGATTGGCCACTATTCTGTaGACCATCTCAGAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MCYVHINVGFTVSAESLRLATIL*TISEEL Trigger: CAGCTCCTCTGAGATGGTTCACAGAATAGTGGCCAA...TCTGAGGGATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109410.4 |
||
| CDS-3UTR TCA 90 bp | TGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATACATATCCGATTTCCTCTATTTTCTaGGCTGGGTCCATGATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: WRSHQGAKDRNLFCYTYPISSIF*AGSMIV Trigger: TACGATCATGGACCCAGCTCAGAAAATAGAGGAAAT...CGGATATGTATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR TCA 90 bp | TTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCCCCCCTTCATCTCTCTaGACTGTGCTTGCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FADVLCSHKCGLHSVCRIPPSSL*TVLAES Trigger: AGACTCTGCAAGCACAGTTCAGAGAGATGAAGGGGG...GATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR TCA 90 bp | CATAGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACATCTTTGTGCCTCTCCTaGGACCCCTTTAGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSQRSLQMCYVHINVGFTSLCLS*DPFSSW Trigger: CCAGGAGCTAAAGGGGTCTCAGGAGAGGCACAAAGA...TGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | TTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCCGTGAAGACACACTTGTaGCACCTGCTGACTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQMCYVHINVGFTVSAESVKTHL*HLLTLQ Trigger: TTGGAGAGTCAGCAGGTGGCACAAGTGTGTCTTCAC...GGATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | ATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCCCTCAGACATCTCTCTGAACTGTaGTTGCAGAGTCTCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MCYVHINVGFTVSAESLRHLSEL*LQSLWV Trigger: GACCCAGAGACTCTGCAAGCACAGTTCAGAGAGATG...TCTGAGGGATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCTATACATATCCGGGGATTCTTTTCTCTTCTATATCATCTCTAGAACAAGGCTGCCTCTCACCTaGCCTGTGTGTGTGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLYISGDSFLFYIISRTRLPLT*PVCVFL Trigger: CAGGAACACACACACAGGCCAGGTGAGAGGCAGCCT...TGTTCTAGAGATGATATAGAAGAGAAAAGAATCCCCGGATATGTATAGCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | AATCATAGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCAGGCTGCCTCTCACCTaGCCTGTGTGTGTGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NHSQRSLQMCYVHINVGFRLPLT*PVCVFL Trigger: CAGGAACACACACACAGGCCAGGTGAGAGGCAGCCT...GAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | ATGGTAGGGTCAAAAAGCTTTCCAAACCTCAGACATGAAGCCCACATGCCTTTCCTCTATTTTCTGAGCTaGGTCCATGATCGTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MVGSKSFPNLRHEAHMPFLYFLS*VHDRRK Trigger: CTTCCTACGATCATGGACCCAGCTCAGAAAATAGAG...GAAAGGCATGTGGGCTTCATGTCTGAGGTTTGGAAAGCTTTTTGACCCTACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR CCA 90 bp | CACAATCATAGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTGCTTGCAGAGTCTCTaGGTCCTCAGTGTCCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HNHSQRSLQMCYVHINVGCLQSL*VLSVPH Trigger: ATGGGGGACACTGAGGACCCAGAGACTCTGCAAGCA...GCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATGATTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR TCA 90 bp | AGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGACTTGTGCCACCTGCTaGCTCTCCAAAAATGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQRSLQMCYVHINVGFTVTCATC*LSKNGD Trigger: GTCACCATTTTTGGAGAGTCAGCAGGTGGCACAAGT...CACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR TCA 90 bp | TCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATTGGCCACTATTCTGTaGACCATCTCAGAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLQMCYVHINVGFTVSAELATIL*TISEEL Trigger: CAGCTCCTCTGAGATGGTTCACAGAATAGTGGCCAA...TTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCGTGAAGACACACTTGTaGCACCTGCTGACTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FADVLCSHKCGLHSVCRIVKTHL*HLLTLQ Trigger: TTGGAGAGTCAGCAGGTGGCACAAGTGTGTCTTCAC...GATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | TGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATACATATCCGTCATTTTTAGGGCTGTaGTTTTTAGAACAGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WRSHQGAKDRNLFCYTYPSFLGL*FLEQLA Trigger: TGCCAGCTGTTCTAAAAAGCACAGCCCTAAAAATGA...CGGATATGTATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCTCTCTGAACTGTGCTTaGAGAGTCTCTGGGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FADVLCSHKCGLHSVCRISLNCA*RVSGSS Trigger: TGAGGACCCAGAGACTCTGCAAGCACAGTTCAGAGA...GATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | TCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCTCTGAACTGTGCTTaGAGAGTCTCTGGGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQMCYVHINVGFTVSAESLNCA*RVSGSS Trigger: TGAGGACCCAGAGACTCTGCAAGCACAGTTCAGAGA...TTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | GTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTACTTCATTATCCTTCTaGTTAGTTGCTCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTSIHGEAIRVPRTEISSTSLSF*LVAPLP Trigger: AGGAAGAGGAGCAACTAAGCAGAAGGATAATGAAGT...AGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCTATACATATCCGGGGATTCTTTTCTCTTCTATATCATCTCTAGAACAGGCTGGATGTCCAGCTaGAGGTACTGCTCATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLYISGDSFLFYIISRTGWMSS*RYCSSW Trigger: CCATGATGAGCAGTACCTGCAGCTGGACATCCAGCC...TGTTCTAGAGATGATATAGAAGAGAAAAGAATCCCCGGATATGTATAGCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | CTTTTCTCTTCTATATCATCTCTAGAACACAATCATAGCCAAAGATCTTTGCAGACACCCAGGCGGTACTaGATAGCGACCACCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: LFSSISSLEHNHSQRSLQTPRRY*IATTTT Trigger: TGTGGTGGTGGTCGCTATCCAGTACCGCCTGGGTGT...CTGCAAAGATCTTTGGCTATGATTGTGTTCTAGAGATGATATAGAAGAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | TTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCGGGTTGCCTCCAAAGTaGACAATGTTTTGCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FADVLCSHKCGLHSVCRIGLPPK*TMFCWT Trigger: GGTCCAGCAAAACATTGTCCACTTTGGAGGCAACCC...GATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | TTGGCCTTGCTTGAGGTGTCTATAAACATACCAAGTCAAGCTTTTCACAAAAGTTCCATGATGGCACCATaGAAGAGTCCCTGGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: LALLEVSINIPSQAFHKSSMMAP*KSPWDM Trigger: CATGTCCCAGGGACTCTTCCATGGTGCCATCATGGA...ACTTTTGTGAAAAGCTTGACTTGGTATGTTTATAGACACCTCAAGCAAGGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR CCA 90 bp | TCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTGGCAGGGTCTTTCTaGTTATTTCCTCTATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPYMEKPSGCQGQKSLLLAGSF*LFPLFS Trigger: AGAAAATAGAGGAAATAACCAGAAAGACCCTGCCAG...CAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | AATCATAGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCAGCTCCTGGATCTTCTaGGGCAGAGTCTTGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NHSQRSLQMCYVHINVGFSSWIF*GRVLVQ Trigger: CTGGACCAAGACTCTGCCCCAGAAGATCCAGGAGCT...GAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR TCA 90 bp | CTTCTGCTATACATATCCGGGGATTCTTTTCTCTTCTATATCATCTCTAGAACAACTCTCCAAAAATGGTaGCTCGGTCAGGGTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLYISGDSFLFYIISRTTLQKW*LGQGCL Trigger: GAGGCAACCCTGACCGAGTCACCATTTTTGGAGAGT...TGTTCTAGAGATGATATAGAAGAGAAAAGAATCCCCGGATATGTATAGCAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR TCA 90 bp | TTGGCCTTGCTTGAGGTGTCTATAAACATACCAAGTCAAGCTTTTCACAAAAGTACTTGTGCCACCTGCTaGCTCTCCAAAAATGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LALLEVSINIPSQAFHKSTCATC*LSKNGD Trigger: GTCACCATTTTTGGAGAGTCAGCAGGTGGCACAAGT...ACTTTTGTGAAAAGCTTGACTTGGTATGTTTATAGACACCTCAAGCAAGGCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR TCA 90 bp | AATCATAGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCATGCTGGGGACAGGGTaGAAATCCTTAGAGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: NHSQRSLQMCYVHINVGFMLGTG*KSLEAI Trigger: GATGGCCTCTAAGGATTTTCACCCTGTCCCCAGCAT...GAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | CACAATCATAGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCCATGCCAACAGTGAGTaGACCACCATGGATCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: HNHSQRSLQMCYVHINVGHANSE*TTMDPY Trigger: GTATGGATCCATGGTGGTGCACTCACTGTTGGCATG...GCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATGATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | AGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGAAGTGGACAATGTTTTaGTGGACCCAACGAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQRSLQMCYVHINVGFTVKWTMF*WTQRRA Trigger: TGCCCTTCGTTGGGTCCAGCAAAACATTGTCCACTT...CACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | CCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCAAGTGGACAATGTTTTaGTGGACCCAACGAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKIFADVLCSHKCGLHSVKWTMF*WTQRRA Trigger: TGCCCTTCGTTGGGTCCAGCAAAACATTGTCCACTT...GACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | AAGTCACTTCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTTCATTTTTAGGGCTGTaGTTTTTAGAACAGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSLPYMEKPSGCQGQKSLSFLGL*FLEQLA Trigger: TGCCAGCTGTTCTAAAAAGCACAGCCCTAAAAATGA...AAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGAAGTGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | AGAAATCTCTTCTGCTATACATATCCGGGGATTCTTTTCTCTTCTATATCATCTGGCTGGATGTCCAGCTaGAGGTACTGCTCATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RNLFCYTYPGILFSSISSGWMSS*RYCSSW Trigger: CCATGATGAGCAGTACCTGCAGCTGGACATCCAGCC...AGATGATATAGAAGAGAAAAGAATCCCCGGATATGTATAGCAGAAGAGATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | CTATTTCTCATACCACAGAACTTTACATACATTTCTGTTGTTTGCAAGTTACCCCCATGGAAGAGTCCCTaGGACATGGGGGACACAACA | + |
|
Preference number: 4 (lower is better) Translates to: LFLIPQNFTYISVVCKLPPWKSP*DMGDTT Trigger: TGTTGTGTCCCCCATGTCCCAGGGACTCTTCCATGG...GGGTAACTTGCAAACAACAGAAATGTATGTAAAGTTCTGTGGTATGAGAAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR CCA 90 bp | TTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCCCTCTATTTTCTGAGCTaGGTCCATGATCGTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQMCYVHINVGFTVSAESLYFLS*VHDRRK Trigger: CTTCCTACGATCATGGACCCAGCTCAGAAAATAGAG...GGATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | AAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCTCTCTGCTTCATTCTTaGCTCTTAGGCAGCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: KIFADVLCSHKCGLHSVCSLLHS*LLGSTS Trigger: TGATGTGCTGCCTAAGAGGCAAGAATGAAGCAGAGA...GCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | CTATTTCTCATACCACAGAACTTTACATACATTTCTGTTGTTTGCAAGTTACCCCATCTCTCTGAACTGTaGTTGCAGAGTCTCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFLIPQNFTYISVVCKLPHLSEL*LQSLWV Trigger: GACCCAGAGACTCTGCAAGCACAGTTCAGAGAGATG...GGGTAACTTGCAAACAACAGAAATGTATGTAAAGTTCTGTGGTATGAGAAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR CCA 90 bp | CTATTTCTCATACCACAGAACTTTACATACATTTCTGTTGTTTGCAAGTTACCCGGGTTGCCTCCAAAGTaGACAATGTTTTGCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LFLIPQNFTYISVVCKLPGLPPK*TMFCWT Trigger: GGTCCAGCAAAACATTGTCCACTTTGGAGGCAACCC...GGGTAACTTGCAAACAACAGAAATGTATGTAAAGTTCTGTGGTATGAGAAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR TCA 90 bp | CAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTATTTCCTCTATTTTCTaGGCTGGGTCCATGATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: QRSLQMCYVHINVGFTVSISSIF*AGSMIV Trigger: TACGATCATGGACCCAGCTCAGAAAATAGAGGAAAT...AGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCTATACATATCCGGGGATTCTTTTCTCTTCTATATCATCTCTAGAACATCTCTGCTTCATTCTTaGCTCTTAGGCAGCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLYISGDSFLFYIISRTSLLHS*LLGSTS Trigger: TGATGTGCTGCCTAAGAGGCAAGAATGAAGCAGAGA...TGTTCTAGAGATGATATAGAAGAGAAAAGAATCCCCGGATATGTATAGCAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | CCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCCTGGCAGGGTCTTTCTaGTTATTTCCTCTATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKIFADVLCSHKCGLHSVLAGSF*LFPLFS Trigger: AGAAAATAGAGGAAATAACCAGAAAGACCCTGCCAG...GACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR GCA 90 bp | CAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTACTTCATTATCCTTCTaGTTAGTTGCTCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRSLQMCYVHINVGFTVSTSLSF*LVAPLP Trigger: AGGAAGAGGAGCAACTAAGCAGAAGGATAATGAAGT...AGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CCA 90 bp | CTTTTCTCTTCTATATCATCTCTAGAACACAATCATAGCCAAAGATCTTTGCAGAGCCTTCACATAGGGTaGCCTGAAATCCTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFSSISSLEHNHSQRSLQSLHIG*PEILEE Trigger: TTCTTCAAGGATTTCAGGCCACCCTATGTGAAGGCT...CTGCAAAGATCTTTGGCTATGATTGTGTTCTAGAGATGATATAGAAGAGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| 3UTR CAA 72 bp | ATATCATCTCTAGAACACAATCATAGCCAAAGATCTTaGCAGATGTGTTATGTTCACATAAATGTGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISSLEHNHSQRS*QMCYVHINVGF Trigger: GAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATGATTGTGTTCTAGAGATGATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS TCA 90 bp | GCTGCCTCTCACCTGGCCTGTGTGTGTGTTCCTGATGGGGCTGGCTaGGTCCTGACCTTGCACATGCAGAACGAGAAGCAGGACCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AASHLACVCVPDGAG*VLTLHMQNEKQDPT Trigger: TGTGGGGTCCTGCTTCTCGTTCTGCATGTGCAAGGTCAGGACTCAGCCAGCCCCATCAGGAACACACACACAGGCCAGGTGAGAGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS CCA 90 bp | CCTGGATCTTCTGGGGCAGAGTCTTGGTCCAGAACTGCAGCCTTCTaGCCTTCAGGGCTCGACCCACAGAAGGCTGGATGTCCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGSSGAESWSRTAAF*PSGLDPQKAGCPAA Trigger: TGCAGCTGGACATCCAGCCTTCTGTGGGTCGAGCCCTGAAGGCCAGAAGGCTGCAGTTCTGGACCAAGACTCTGCCCCAGAAGATCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS CCA 90 bp | TGCTGGTCTCCAGTGCTGAAGAATCCCAGAACACCCAGGCGGTACTaGATAGCGACCACCACCACATCCTCAGTTGCTGCCAGCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CWSPVLKNPRTPRRY*IATTTTSSVAASMD Trigger: ATCCATGCTGGCAGCAACTGAGGATGTGGTGGTGGTCGCTATCCAGTACCGCCTGGGTGTTCTGGGATTCTTCAGCACTGGAGACCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS CCA 90 bp | ATAAGATCAGGGAGCACAGCTACTCCACTCTCCATGATGGCACCATaGAAGAGTCCCTGGGACATGGGGGACACAACATGTGAAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: IRSGSTATPLSMMAP*KSPWDMGDTTCEDT Trigger: TGTGTCTTCACATGTTGTGTCCCCCATGTCCCAGGGACTCTTCCATGGTGCCATCATGGAGAGTGGAGTAGCTGTGCTCCCTGATCTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS CCA 90 bp | AGTAGGGTAGACCCTCACTGTTGGGGTTCCCGTGCCGTGCAAAGTTaGCCCAGTACTTCATTATCCTTCTGCTTAGTTGCTCCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRVDPHCWGSRAVQS*PSTSLSFCLVAPLP Trigger: AGGAAGAGGAGCAACTAAGCAGAAGGATAATGAAGTACTGGGCCAACTTTGCACGGCACGGGAACCCCAACAGTGAGGGTCTACCCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS CCA 90 bp | GATCCATCATACATGGAAGCCATGCCAACAGTGAGTGCACCACCATaGATCCATACCATCACAGGTAGGTTAGAACCCTCATGGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: DPSYMEAMPTVSAPP*IHTITGRLEPSWAW Trigger: CCATGCCCATGAGGGTTCTAACCTACCTGTGATGGTATGGATCCATGGTGGTGCACTCACTGTTGGCATGGCTTCCATGTATGATGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CAA 90 bp | TCCATACATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATACCACCACATCCTCAGTaGCTGCCAGCATGGATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SIHGEAIRVPRTEISSAIPPHPQ*LPAWIH Trigger: ATGGATCCATGCTGGCAGCAACTGAGGATGTGGTGG...TATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCATGTATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CAA 90 bp | TTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAATCTCCAGGTATCCCCAGTaGCCTTTGGCATGCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FADVLCSHKCGLHSVCRISRYPQ*PLACWS Trigger: AGACCAGCATGCCAAAGGCAACTGGGGATACCTGGA...GATTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS-3UTR CAA 90 bp | ATGGAGAAGCCATCAGGGTGCCAAGGACAGAAATCTCTTCTGCTATACATATCCGAAGCTGGGTCGATGTaGGAACTCATAGAAGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: MEKPSGCQGQKSLLLYISEAGSM*ELIEVD Trigger: GTCTACTTCTATGAGTTCCAACATCGACCCAGCTTC...GGATATGTATAGCAGAAGAGATTTCTGTCCTTGGCACCCTGATGGCTTCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CAA 90 bp | AAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCGGTGGCCTGAAATCCTaGAAGAAGCTGGGTCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: KIFADVLCSHKCGLHSVCGGLKS*KKLGRC Trigger: ACATCGACCCAGCTTCTTCAAGGATTTCAGGCCACC...GCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CAA 90 bp | CCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCCCGTGCCGTGCAAAGTaGGCCCAGTACTTCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: PKIFADVLCSHKCGLHSVPCRAK*AQYFII Trigger: GATAATGAAGTACTGGGCCAACTTTGCACGGCACGG...GACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CAA 90 bp | TCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGTCTGCAGAACCGTGCCGTGCAAAGTaGGCCCAGTACTTCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: SLQMCYVHINVGFTVSAEPCRAK*AQYFII Trigger: GATAATGAAGTACTGGGCCAACTTTGCACGGCACGG...TTCTGCAGACACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CAA 90 bp | AATCATAGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCCCACCACATCCTCAGTaGCTGCCAGCATGGATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NHSQRSLQMCYVHINVGFPPHPQ*LPAWIH Trigger: ATGGATCCATGCTGGCAGCAACTGAGGATGTGGTGG...GAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CAA 90 bp | AATCATAGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCTCCAGGTATCCCCAGTaGCCTTTGGCATGCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NHSQRSLQMCYVHINVGFSRYPQ*PLACWS Trigger: AGACCAGCATGCCAAAGGCAACTGGGGATACCTGGA...GAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CAA 90 bp | CTATTTCTCATACCACAGAACTTTACATACATTTCTGTTGTTTGCAAGTTACCCACGAAGGGCAGCCACTaGGTCCAGGTATCCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LFLIPQNFTYISVVCKLPTKGSH*VQVSPV Trigger: AACTGGGGATACCTGGACCAAGTGGCTGCCCTTCGT...GGGTAACTTGCAAACAACAGAAATGTATGTAAAGTTCTGTGGTATGAGAAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034355.11 |
||
| CDS-3UTR CAA 90 bp | AATCATAGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCGTGACTCGGTCAGGGTaGCCTCCAAAGTGGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: NHSQRSLQMCYVHINVGFVTRSG*PPKWTM Trigger: CATTGTCCACTTTGGAGGCAACCCTGACCGAGTCAC...GAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CAA 90 bp | CATAGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGGTGGCCTGAAATCCTaGAAGAAGCTGGGTCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: HSQRSLQMCYVHINVGFTGGLKS*KKLGRC Trigger: ACATCGACCCAGCTTCTTCAAGGATTTCAGGCCACC...TGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CAA 90 bp | CTTTTCTCTTCTATATCATCTCTAGAACACAATCATAGCCAAAGATCTTTGCAGGTGACTCGGTCAGGGTaGCCTCCAAAGTGGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: LFSSISSLEHNHSQRSLQVTRSG*PPKWTM Trigger: CATTGTCCACTTTGGAGGCAACCCTGACCGAGTCAC...CTGCAAAGATCTTTGGCTATGATTGTGTTCTAGAGATGATATAGAAGAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS-3UTR CAA 90 bp | AGCCAAAGATCTTTGCAGATGTGTTATGTTCACATAAATGTGGGCTTCACAGTGGAAGCTGGGTCGATGTaGGAACTCATAGAAGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SQRSLQMCYVHINVGFTVEAGSM*ELIEVD Trigger: GTCTACTTCTATGAGTTCCAACATCGACCCAGCTTC...CACTGTGAAGCCCACATTTATGTGAACATAACACATCTGCAAAGATCTTTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS CCA 72 bp | TCAGTGTCCTTCACGTGGACAAGGCTGCCTCTCACCTaGCCTGTGTGTGTGTTCCTGATGGGGCTGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SVSFTWTRLPLT*PVCVFLMGLAE Trigger: CTCAGCCAGCCCCATCAGGAACACACACACAGGCCAGGTGAGAGGCAGCCTTGTCCACGTGAAGGACACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS CCA 72 bp | TCTGGGGCAGAGTCTTGGTCCAGAACTGCAGCCTTCTaGCCTTCAGGGCTCGACCCACAGAAGGCTGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: SGAESWSRTAAF*PSGLDPQKAGC Trigger: ACATCCAGCCTTCTGTGGGTCGAGCCCTGAAGGCCAGAAGGCTGCAGTTCTGGACCAAGACTCTGCCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS TCA 72 bp | CACCTGGCCTGTGTGTGTGTTCCTGATGGGGCTGGCTaGGTCCTGACCTTGCACATGCAGAACGAGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HLACVCVPDGAG*VLTLHMQNEKQ Trigger: CTGCTTCTCGTTCTGCATGTGCAAGGTCAGGACTCAGCCAGCCCCATCAGGAACACACACACAGGCCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS GCA 72 bp | TCCTGGATCTTCTGGGGCAGAGTCTTGGTCCAGAACTaGAGCCTTCTGGCCTTCAGGGCTCGACCCACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SWIFWGRVLVQN*SLLAFRARPTE Trigger: TTCTGTGGGTCGAGCCCTGAAGGCCAGAAGGCTGCAGTTCTGGACCAAGACTCTGCCCCAGAAGATCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS GCA 72 bp | GCCACTTGGTCCAGGTATCCCCAGTTGCCTTTGGCATaGTGGTCTCCAGTGCTGAAGAATCCCAGAACACCC | + |
|
Preference number: 6 (lower is better) Translates to: ATWSRYPQLPLA*WSPVLKNPRTP Trigger: GGGTGTTCTGGGATTCTTCAGCACTGGAGACCAGCATGCCAAAGGCAACTGGGGATACCTGGACCAAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS CCA 72 bp | ACTTGGTCCAGGTATCCCCAGTTGCCTTTGGCATGCTaGTCTCCAGTGCTGAAGAATCCCAGAACACCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TWSRYPQLPLAC*SPVLKNPRTPR Trigger: CCTGGGTGTTCTGGGATTCTTCAGCACTGGAGACCAGCATGCCAAAGGCAACTGGGGATACCTGGACCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS GCA 72 bp | GTACTGGATAGCGACCACCACCACATCCTCAGTTGCTaGCAGCATGGATCCATCATACATGGAAGCCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: VLDSDHHHILSC*QHGSIIHGSHA Trigger: GGCATGGCTTCCATGTATGATGGATCCATGCTGGCAGCAACTGAGGATGTGGTGGTGGTCGCTATCCAGTAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS GCA 72 bp | CACGAACATGAAGTCCCCCTTCATCTCTCTGAACTGTaGTTGCAGAGTCTCTGGGTCCTCAGTGTCCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HEHEVPLHLSEL*LQSLWVLSVPH Trigger: ATGGGGGACACTGAGGACCCAGAGACTCTGCAAGCACAGTTCAGAGAGATGAAGGGGGACTTCATGTTCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
||
| CDS CCA 72 bp | CCAAAAATGGTGACTCGGTCAGGGTTGCCTCCAAAGTaGACAATGTTTTGCTGGACCCAACGAAGGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PKMVTRSGLPPK*TMFCWTQRRAA Trigger: GGCTGCCCTTCGTTGGGTCCAGCAAAACATTGTCCACTTTGGAGGCAACCCTGACCGAGTCACCATTTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS CAA 90 bp | AGGGATCACGAACATGAAGTCCCCCTTCATCTCTCTGAACTGTGCTaGCAGAGTCTCTGGGTCCTCAGTGTCCCCCATGTACTCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RDHEHEVPLHLSELC*QSLWVLSVPHVLLH Trigger: ATGGAGGAGTACATGGGGGACACTGAGGACCCAGAGACTCTGCAAGCACAGTTCAGAGAGATGAAGGGGGACTTCATGTTCGTGATCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS CCA 72 bp | GGGTCTCTGAGTTCACAGCTGCACAGCCAGATAGATTaGCCACTATTCTGTGAACCATCTCAGAGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSLSSQLHSQID*PLFCEPSQRSW Trigger: CCAGCTCCTCTGAGATGGTTCACAGAATAGTGGCCAATCTATCTGGCTGTGCAGCTGTGAACTCAGAGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS CCA 72 bp | GACCCTCACTGTTGGGGTTCCCGTGCCGTGCAAAGTTaGCCCAGTACTTCATTATCCTTCTGCTTAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: DPHCWGSRAVQS*PSTSLSFCLVA Trigger: AGCAACTAAGCAGAAGGATAATGAAGTACTGGGCCAACTTTGCACGGCACGGGAACCCCAACAGTGAGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS CAA 72 bp | GAACATGAAGTCCCCCTTCATCTCTCTGAACTGTGCTaGCAGAGTCTCTGGGTCCTCAGTGTCCCCCATGTA | + |
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Preference number: 6 (lower is better) Translates to: EHEVPLHLSELC*QSLWVLSVPHV Trigger: TACATGGGGGACACTGAGGACCCAGAGACTCTGCAAGCACAGTTCAGAGAGATGAAGGGGGACTTCATGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS CAA 72 bp | AGACCCTCACTGTTGGGGTTCCCGTGCCGTGCAAAGTaGGCCCAGTACTTCATTATCCTTCTGCTTAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: RPSLLGFPCRAK*AQYFIILLLSC Trigger: GCAACTAAGCAGAAGGATAATGAAGTACTGGGCCAACTTTGCACGGCACGGGAACCCCAACAGTGAGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS TCA 72 bp | GCATGGATCCATCATACATGGAAGCCATGCCAACAGTaGGTGCACCACCATGGATCCATACCATCACAGGTA | + |
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Preference number: 6 (lower is better) Translates to: AWIHHTWKPCQQ*VHHHGSIPSQV Trigger: TACCTGTGATGGTATGGATCCATGGTGGTGCACTCACTGTTGGCATGGCTTCCATGTATGATGGATCCATGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS TCA 72 bp | ACAGCTGCACAGCCAGATAGATTGGCCACTATTCTGTaGACCATCTCAGAGGAGCTGGAGATAAGATCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TAAQPDRLATIL*TISEELEIRSG Trigger: CCCTGATCTTATCTCCAGCTCCTCTGAGATGGTTCACAGAATAGTGGCCAATCTATCTGGCTGTGCAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS TCA 72 bp | GCTGGCAGGGTCTTTCTGGTTATTTCCTCTATTTTCTaGGCTGGGTCCATGATCGTAGGAAGAATCCAACCA | + |
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Preference number: 6 (lower is better) Translates to: AGRVFLVISSIF*AGSMIVGRIQP Trigger: TGGTTGGATTCTTCCTACGATCATGGACCCAGCTCAGAAAATAGAGGAAATAACCAGAAAGACCCTGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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| CDS CAA 90 bp | GGCAGGATCAAGTTCATCATCTTCAGATCCTCTGAACCCATCAAATaGTCATTTTGTAGACACATGTTTGGATGTGAGGTCCCATCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GRIKFIIFRSSEPIK*SFCRHMFGCEVPSL Trigger: GAGGGATGGGACCTCACATCCAAACATGTGTCTACAAAATGACAATTTGATGGGTTCAGAGGATCTGAAGATGATGAACTTGATCCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034355.11 ENSMUST00000109410.4 |
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