Pregenerated sensors for CES2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061825Ensembl transcript IDs: ENSMUST00000055052.6
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGGGGTTGGCCTCTGGTaGGTCCTGACCCTGCACATG | + |
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Preference number: 4 (lower is better) Translates to: YRVFFIHESSKTEVTDAYGVGLW*VLTLHM Trigger: CATGTGCAGGGTCAGGACTCACCAGAGGCCAACCCC...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | ATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACATCTGAGCAGAGCCCATaGCCACAGGAATGGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: IHESSKTEVTDAYVSVGTSEQSP*PQEWTS Trigger: GCTGGTCCATTCCTGTGGTCATGGGCTCTGCTCAGA...TGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | CATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAATCGACCCACAGCAGGCTaGATGTCCAGTTGCAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: HESSKTEVTDAYVSVGTNRPTAG*MSSCRY Trigger: GTACCTGCAACTGGACATCCAGCCTGCTGTGGGTCG...ATTTGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATCCACCCCACTCTCCATaGTGGCACCATGGAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: YRVFFIHESSKTEVTDAYPPHSP*WHHGRA Trigger: GGCTCTTCCATGGTGCCATCATGGAGAGTGGGGTGG...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | CATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAATCCATGGAAGAGCCCTTaGGACATGGGGGACACAACA | + |
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Preference number: 4 (lower is better) Translates to: HESSKTEVTDAYVSVGTNPWKSP*DMGDTT Trigger: TGTTGTGTCCCCCATGTCCCAAGGGCTCTTCCATGG...ATTTGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | CATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAATCTGGGGTGTAGATGTTaGGATACAGGCAGTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: HESSKTEVTDAYVSVGTNLGCRC*DTGSPQ Trigger: CTGAGGACTGCCTGTATCTCAACATCTACACCCCAG...ATTTGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | GTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGCTGGTCTCCAGTGCTaGAAAAGCCCAGGACACCCA | + |
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Preference number: 4 (lower is better) Translates to: VFFIHESSKTEVTDAYVSAGLQC*KSPGHP Trigger: TGGGTGTCCTGGGCTTTTTCAGCACTGGAGACCAGC...ACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | GTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGGGTTGCCTCCAAAGTaGGCGATGTTCTGCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: VFFIHESSKTEVTDAYVSGLPPK*AMFCWT Trigger: GGTCCAGCAGAACATCGCTCACTTTGGAGGCAACCC...ACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR GCA 90 bp | CATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAATACACATGGCCGGATGTaGAGTTCCATCTCTCACACC | + |
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Preference number: 4 (lower is better) Translates to: HESSKTEVTDAYVSVGTNTHGRM*SSISHT Trigger: GGTGTGAGAGATGGAACTGCACATCCGGCCATGTGT...ATTTGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | TTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTTCTCACACCACTCCATaGTTCAGGGGCCTCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: FFIHESSKTEVTDAYVSVSHTTP*FRGLRR Trigger: CCTCCTGAGGCCCCTGAACCATGGAGTGGTGTGAGA...AACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | CATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAATAGAGCCCTTGGGACATaGGGGACACAACATGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: HESSKTEVTDAYVSVGTNRALGT*GTQHVK Trigger: CTTCACATGTTGTGTCCCCCATGTCCCAAGGGCTCT...ATTTGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATCAGCGCACCAGGGCCTaGGAATCCATAGCCTCACAT | + |
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Preference number: 4 (lower is better) Translates to: YRVFFIHESSKTEVTDAYQRTRA*ESIASH Trigger: ATGTGAGGCTATGGATTCCCAGGCCCTGGTGCGCTG...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | ATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAACTCTTTGGGATGCCTaGGGAAGAACTCCCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: IHESSKTEVTDAYVSVGTTLWDA*GRTPHP Trigger: TGGATGGGGAGTTCTTCCCCAGGCATCCCAAAGAGT...TGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | TTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGCCTCTGGTGAGTCCTaGCCCTGCACATGGATAAGA | + |
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Preference number: 4 (lower is better) Translates to: FFIHESSKTEVTDAYVSVASGES*PCTWIR Trigger: TCTTATCCATGTGCAGGGTCAGGACTCACCAGAGGC...AACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | GTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGGGGGACACAACATGTaGAGACACACTTGTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: VFFIHESSKTEVTDAYVSGGHNM*RHTCAT Trigger: GGTGGCACAAGTGTGTCTTCACATGTTGTGTCCCCC...ACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | TTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGCTCCTCCTCCTCAGTaGAGTCAAGTTTCATGCCCC | + |
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Preference number: 4 (lower is better) Translates to: FFIHESSKTEVTDAYVSVAPPPQ*SQVSCP Trigger: GGGGCATGAAACTTGACTTCACTGAGGAGGAGGAGC...AACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | TTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTTCCCTGTGCTTGTCCTaGGAAGCCTTTAGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FFIHESSKTEVTDAYVSVSLCLS*EAFSSW Trigger: CCAGGAGCTAAAGGCTTCTCAGGACAAGCACAGGGA...AACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR GCA 90 bp | ATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAACAACTCTTTGGGATaGCTGGGGAAGAACTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: IHESSKTEVTDAYVSVGTNNSLG*LGKNSP Trigger: TGGGGAGTTCTTCCCCAGGCATCCCAAAGAGTTGTT...TGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATCTGTATGTGTGTTTCTaGTGGGGTTGGCCTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: YRVFFIHESSKTEVTDAYLYVCF*WGWPLV Trigger: CACCAGAGGCCAACCCCATCAGAAACACACATACAG...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATATGCTGGGGACAGGGTaGAAATCCTCAGATGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: YRVFFIHESSKTEVTDAYMLGTG*KSSDAN Trigger: GTTGGCATCTGAGGATTTTCACCCTGTCCCCAGCAT...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR GCA 90 bp | TTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGTGAAGACACACTTGTaGCACCTGCAGACTCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: FFIHESSKTEVTDAYVSVVKTHL*HLQTRQ Trigger: TTGGCGAGTCTGCAGGTGGCACAAGTGTGTCTTCAC...AACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR GCA 90 bp | CATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAATGGAGCGTTGAAAATGTaGTACTTGGAGTGCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: HESSKTEVTDAYVSVGTNGALKM*YLECRD Trigger: ATCCCTGCACTCCAAGTAGCACATTTTCAACGCTCC...ATTTGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATAGGTGCAAATCGCAGTaGTCCTACAGGAGGTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: YRVFFIHESSKTEVTDAYRCKSQ*SYRRFG Trigger: GCCAAACCTCCTGTAGGACCACTGCGATTTGCACCT...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATTCCATGATGGCACCATaGAAGAGCCCTTGGGACATG | + |
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Preference number: 4 (lower is better) Translates to: YRVFFIHESSKTEVTDAYSMMAP*KSPWDM Trigger: CATGTCCCAAGGGCTCTTCCATGGTGCCATCATGGA...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | GTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTAGACCCTCACTGTTaGGGTTCCCATGTCGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: VFFIHESSKTEVTDAYVSVDPHC*GSHVVQ Trigger: TTGCACGACATGGGAACCCCAACAGTGAGGGTCTAC...ACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | CATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAATCAGGGATCACAAACATaGAATCTCCCATCATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HESSKTEVTDAYVSVGTNQGSQT*NLPSSL Trigger: CAGAGATGATGGGAGATTTCATGTTTGTGATCCCTG...ATTTGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | ATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAACACCCAGACGATACTaGATAGTAACAACCACCAAG | + |
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Preference number: 4 (lower is better) Translates to: IHESSKTEVTDAYVSVGTTPRRY*IVTTTK Trigger: CTTGGTGGTTGTTACTATCCAGTATCGTCTGGGTGT...TGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | GTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTAGCCTTCACGTGGGGTaGTCTGACATCCTTGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: VFFIHESSKTEVTDAYVSSLHVG*SDILEV Trigger: TACTTCAAGGATGTCAGACCACCCCACGTGAAGGCT...ACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | TTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTCTCCCATCATCTCTGTaGACTGTATTTGGAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: FFIHESSKTEVTDAYVSVLPSSL*TVFGGS Trigger: AGACCCTCCAAATACAGTTCACAGAGATGATGGGAG...AACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR GCA 90 bp | CATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAATCAGCATCATTTGTACTaGTGTATCCTTCAGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: HESSKTEVTDAYVSVGTNQHHLY*CILQNS Trigger: GCTGTTCTGAAGGATACAGCAGTACAAATGATGCTG...ATTTGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATCATGTCGTGCAAAGTTaGCCCAGTACTTCATCATCC | + |
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Preference number: 4 (lower is better) Translates to: YRVFFIHESSKTEVTDAYHVVQS*PSTSSS Trigger: GGATGATGAAGTACTGGGCCAACTTTGCACGACATG...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR TCA 90 bp | TTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTATTCCTTTTATCATCTaGGCAGAGCCCATGACCACA | + |
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Preference number: 4 (lower is better) Translates to: FFIHESSKTEVTDAYVSVIPFII*AEPMTT Trigger: TGTGGTCATGGGCTCTGCTCAGATGATAAAAGGAAT...AACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR GCA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATAGCATGTCAAGATTTTaGAGACACATGGCCGGATGT | + |
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Preference number: 4 (lower is better) Translates to: YRVFFIHESSKTEVTDAYSMSRF*RHMAGC Trigger: ACATCCGGCCATGTGTCTGCAAAATCTTGACATGCT...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR GCA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATTCCTTCAGAACAGCCTaGAGGTTCTCTCTGGTTATT | + |
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Preference number: 4 (lower is better) Translates to: YRVFFIHESSKTEVTDAYSFRTA*RFSLVI Trigger: AATAACCAGAGAGAACCTGCAGGCTGTTCTGAAGGA...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | GTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTCATCATTTTCATATCTaGCAGGCCTGCTTCATTCAG | + |
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Preference number: 4 (lower is better) Translates to: VFFIHESSKTEVTDAYVSHHFHI*QACFIQ Trigger: CTGAATGAAGCAGGCCTGCCAGATATGAAAATGATG...ACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATCTTGAAGTAGCTGGGTaGATGTTGGAACTCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: YRVFFIHESSKTEVTDAYLEVAG*MLELIE Trigger: TTCTATGAGTTCCAACATCCACCCAGCTACTTCAAG...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CCA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATCCTGCAGGTTCTCTCTaGTTATTCCTTTTATCATCT | + |
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Preference number: 4 (lower is better) Translates to: YRVFFIHESSKTEVTDAYPAGSL*LFLLSS Trigger: AGATGATAAAAGGAATAACCAGAGAGAACCTGCAGG...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 90 bp | CAGAACTGCAGCCTTCCAGCCTTCAGGGCTCGACCCACAGCAGGCTaGATGTCCAGTTGCAGGTACTGCTCATCATGGTCCATCACAGGC | + |
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Preference number: 5 (lower is better) Translates to: QNCSLPAFRARPTAG*MSSCRYCSSWSITG Trigger: GCCTGTGATGGACCATGATGAGCAGTACCTGCAACTGGACATCCAGCCTGCTGTGGGTCGAGCCCTGAAGGCTGGAAGGCTGCAGTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 90 bp | CAGACACATGGCCGGATGTGCAGTTCCATCTCTCACACCACTCCATaGTTCAGGGGCCTCAGGAGGTGCAAATCGCAGTGGTCCTACAGG | + |
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Preference number: 5 (lower is better) Translates to: QTHGRMCSSISHTTP*FRGLRRCKSQWSYR Trigger: CCTGTAGGACCACTGCGATTTGCACCTCCTGAGGCCCCTGAACCATGGAGTGGTGTGAGAGATGGAACTGCACATCCGGCCATGTGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 90 bp | AGAATCTCTGCTTCACTTTTGCCTCTCAGACAGCGCACCAGGGCCTaGGAATCCATAGCCTCACATCCAGAAAGCTTGGCCACCGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: RISASLLPLRQRTRA*ESIASHPESLATVV Trigger: CACTACGGTGGCCAAGCTTTCTGGATGTGAGGCTATGGATTCCCAGGCCCTGGTGCGCTGTCTGAGAGGCAAAAGTGAAGCAGAGATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 90 bp | GTCAGCCTTCACGTGGGGTGGTCTGACATCCTTGAAGTAGCTGGGTaGATGTTGGAACTCATAGAAGTAGACAGGGGCATGGGAGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: VSLHVGWSDILEVAG*MLELIEVDRGMGAL Trigger: CAACGCTCCCATGCCCCTGTCTACTTCTATGAGTTCCAACATCCACCCAGCTACTTCAAGGATGTCAGACCACCCCACGTGAAGGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS TCA 90 bp | GATGGCACCATGGAAGAGCCCTTGGGACATGGGGGACACAACATGTaGAGACACACTTGTGCCACCTGCAGACTCGCCAAAAATAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: DGTMEEPLGHGGHNM*RHTCATCRLAKNSD Trigger: GTCACTATTTTTGGCGAGTCTGCAGGTGGCACAAGTGTGTCTTCACATGTTGTGTCCCCCATGTCCCAAGGGCTCTTCCATGGTGCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS GCA 90 bp | TGCTTCATTCAGCATGTCAAGATTTTGCAGACACATGGCCGGATGTaGAGTTCCATCTCTCACACCACTCCATGGTTCAGGGGCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: CFIQHVKILQTHGRM*SSISHTTPWFRGLR Trigger: CCTGAGGCCCCTGAACCATGGAGTGGTGTGAGAGATGGAACTGCACATCCGGCCATGTGTCTGCAAAATCTTGACATGCTGAATGAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 90 bp | CTGGCAGGCCTGCTTCATTCAGCATGTCAAGATTTTGCAGACACATaGCCGGATGTGCAGTTCCATCTCTCACACCACTCCATGGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LAGLLHSACQDFADT*PDVQFHLSHHSMVQ Trigger: CTGAACCATGGAGTGGTGTGAGAGATGGAACTGCACATCCGGCCATGTGTCTGCAAAATCTTGACATGCTGAATGAAGCAGGCCTGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS GCA 90 bp | CACAGCAGGGATCATCTTGAAGACCTTGTTAATAGCCAGAATCTCTaGTTCACTTTTGCCTCTCAGACAGCGCACCAGGGCCTGGGAATC | + |
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Preference number: 5 (lower is better) Translates to: HSRDHLEDLVNSQNL*FTFASQTAHQGLGI Trigger: GATTCCCAGGCCCTGGTGCGCTGTCTGAGAGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGGTCTTCAAGATGATCCCTGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS GCA 90 bp | ATTTTCATATCTGGCAGGCCTGCTTCATTCAGCATGTCAAGATTTTaGAGACACATGGCCGGATGTGCAGTTCCATCTCTCACACCACTC | + |
|
Preference number: 5 (lower is better) Translates to: IFISGRPASFSMSRF*RHMAGCAVPSLTPL Trigger: GAGTGGTGTGAGAGATGGAACTGCACATCCGGCCATGTGTCTGCAAAATCTTGACATGCTGAATGAAGCAGGCCTGCCAGATATGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS CCA 90 bp | TGCTGGTCTCCAGTGCTGAAAAAGCCCAGGACACCCAGACGATACTaGATAGTAACAACCACCAAGTCCTCATTGACTGTCAATAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CWSPVLKKPRTPRRY*IVTTTKSSLTVNRD Trigger: ATCTCTATTGACAGTCAATGAGGACTTGGTGGTTGTTACTATCCAGTATCGTCTGGGTGTCCTGGGCTTTTTCAGCACTGGAGACCAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 90 bp | AACATGAAATCTCCCATCATCTCTGTGAACTGTATTTGGAGGGTCTaGGCATCCTCAGTGTCCCCCATGTACTCTTCCATTAGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NMKSPIISVNCIWRV*ASSVSPMYSSISRS Trigger: TGACCTGCTAATGGAAGAGTACATGGGGGACACTGAGGATGCCCAGACCCTCCAAATACAGTTCACAGAGATGATGGGAGATTTCATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 90 bp | GGGATCACAAACATGAAATCTCCCATCATCTCTGTGAACTGTATTTaGAGGGTCTGGGCATCCTCAGTGTCCCCCATGTACTCTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: GITNMKSPIISVNCI*RVWASSVSPMYSSI Trigger: AATGGAAGAGTACATGGGGGACACTGAGGATGCCCAGACCCTCCAAATACAGTTCACAGAGATGATGGGAGATTTCATGTTTGTGATCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 90 bp | AAAGACAAAAGGAATCTCATCAGCATGGTCAGCCTTCACGTGGGGTaGTCTGACATCCTTGAAGTAGCTGGGTGGATGTTGGAACTCATA | + |
|
Preference number: 5 (lower is better) Translates to: KDKRNLISMVSLHVG*SDILEVAGWMLELI Trigger: TATGAGTTCCAACATCCACCCAGCTACTTCAAGGATGTCAGACCACCCCACGTGAAGGCTGACCATGCTGATGAGATTCCTTTTGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CAA 90 bp | ATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAACCATGGAAGAGCCCTaGGGACATGGGGGACACAAC | + |
|
Preference number: 5 (lower is better) Translates to: IHESSKTEVTDAYVSVGTTMEEP*GHGGHN Trigger: GTTGTGTCCCCCATGTCCCAAGGGCTCTTCCATGGT...TGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS GCA 90 bp | TTGGAACTCATAGAAGTAGACAGGGGCATGGGAGCGTTGAAAATGTaGTACTTGGAGTGCAGGGATCACAAACATGAAATCTCCCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LELIEVDRGMGALKM*YLECRDHKHEISHH Trigger: ATGATGGGAGATTTCATGTTTGTGATCCCTGCACTCCAAGTAGCACATTTTCAACGCTCCCATGCCCCTGTCTACTTCTATGAGTTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CAA 90 bp | CATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAATTCACATCCAGAAAGCTaGGCCACCGTAGTGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: HESSKTEVTDAYVSVGTNSHPES*ATVVET Trigger: GGTTTCCACTACGGTGGCCAAGCTTTCTGGATGTGA...ATTTGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS-3UTR CAA 90 bp | ATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAGGGGCATGGGAGCGTaGAAAATGTGCTACTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IHESSKTEVTDAYVSVGTRGMGA*KMCYLE Trigger: CTCCAAGTAGCACATTTTCAACGCTCCCATGCCCCT...TGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CAA 90 bp | ATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAGGCTGGATGTCCAGTaGCAGGTACTGCTCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: IHESSKTEVTDAYVSVGTRLDVQ*QVLLIM Trigger: CATGATGAGCAGTACCTGCAACTGGACATCCAGCCT...TGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS-3UTR CAA 90 bp | CATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAAATGTAGCTGGGTGGATGTaGGAACTCATAGAAGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HESSKTEVTDAYVSVGTNVAGWM*ELIEVD Trigger: GTCTACTTCTATGAGTTCCAACATCCACCCAGCTAC...ATTTGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CAA 90 bp | TACAGAGTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTGGATAAGGCTGCCTaGGATCTGTCCTGTATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: YRVFFIHESSKTEVTDAYVDKAA*DLSCMC Trigger: ACACATACAGGACAGATCCAAGGCAGCCTTATCCAC...ATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATACTCTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS-3UTR CAA 90 bp | ATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACACAGCCAAACTCATCATaGTTGACACCAATGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IHESSKTEVTDAYVSVGTQPNSS*LTPMML Trigger: CAGCATCATTGGTGTCAACAATGATGAGTTTGGCTG...TGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS-3UTR CAA 90 bp | GTATTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTCCATGTCGTGCAAAGTaGGCCCAGTACTTCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: VFFIHESSKTEVTDAYVSPCRAK*AQYFII Trigger: GATGATGAAGTACTGGGCCAACTTTGCACGACATGG...ACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS-3UTR CAA 90 bp | TTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTAGGAGGCAGCATCATTaGTACTGCTGTATCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FFIHESSKTEVTDAYVSVRRQHH*YCCILQ Trigger: CTGAAGGATACAGCAGTACAAATGATGCTGCCTCCT...AACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS-3UTR CAA 90 bp | ATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACATTGAAAATGTGCTACTaGGAGTGCAGGGATCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: IHESSKTEVTDAYVSVGTLKMCY*ECRDHK Trigger: TTTGTGATCCCTGCACTCCAAGTAGCACATTTTCAA...TGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS-3UTR CAA 90 bp | TTTTTCATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTACAGCAGGGATCATCTaGAAGACCTTGTTAATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FFIHESSKTEVTDAYVSVTAGII*KTLLIA Trigger: GGCTATTAACAAGGTCTTCAAGATGATCCCTGCTGT...AACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTATGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS-3UTR CAA 90 bp | ATACATGAAAGCTCAAAGACTGAGGTGACAGATGCTTATGTAAGTGTTGGAACAATCATCTTGAAGACCTaGTTAATAGCCAGAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IHESSKTEVTDAYVSVGTIILKT*LIARIS Trigger: AGAGATTCTGGCTATTAACAAGGTCTTCAAGATGAT...TGTTCCAACACTTACATAAGCATCTGTCACCTCAGTCTTTGAGCTTTCATGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS GCA 72 bp | TCCTGGATCTTCTGGGGCAGAGTCTTGGTCCAGAACTaGAGCCTTCCAGCCTTCAGGGCTCGACCCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SWIFWGRVLVQN*SLPAFRARPTA Trigger: TGCTGTGGGTCGAGCCCTGAAGGCTGGAAGGCTGCAGTTCTGGACCAAGACTCTGCCCCAGAAGATCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS CCA 72 bp | GGCCGGATGTGCAGTTCCATCTCTCACACCACTCCATaGTTCAGGGGCCTCAGGAGGTGCAAATCGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRMCSSISHTTP*FRGLRRCKSQW Trigger: CCACTGCGATTTGCACCTCCTGAGGCCCCTGAACCATGGAGTGGTGTGAGAGATGGAACTGCACATCCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS CCA 72 bp | AGCCTTCCAGCCTTCAGGGCTCGACCCACAGCAGGCTaGATGTCCAGTTGCAGGTACTGCTCATCATGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLPAFRARPTAG*MSSCRYCSSWS Trigger: GGACCATGATGAGCAGTACCTGCAACTGGACATCCAGCCTGCTGTGGGTCGAGCCCTGAAGGCTGGAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS CCA 72 bp | GCTTCACTTTTGCCTCTCAGACAGCGCACCAGGGCCTaGGAATCCATAGCCTCACATCCAGAAAGCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASLLPLRQRTRA*ESIASHPESLA Trigger: GGCCAAGCTTTCTGGATGTGAGGCTATGGATTCCCAGGCCCTGGTGCGCTGTCTGAGAGGCAAAAGTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS CCA 72 bp | GGTCCATCACAGGCCAGTAGGGTAGACCCTCACTGTTaGGGTTCCCATGTCGTGCAAAGTTGGCCCAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: GPSQASRVDPHC*GSHVVQSWPST Trigger: AGTACTGGGCCAACTTTGCACGACATGGGAACCCCAACAGTGAGGGTCTACCCTACTGGCCTGTGATGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS TCA 72 bp | ATGGAAGAGCCCTTGGGACATGGGGGACACAACATGTaGAGACACACTTGTGCCACCTGCAGACTCGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: MEEPLGHGGHNM*RHTCATCRLAK Trigger: TTTGGCGAGTCTGCAGGTGGCACAAGTGTGTCTTCACATGTTGTGTCCCCCATGTCCCAAGGGCTCTTCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CAA 72 bp | GGGTGGTCTGACATCCTTGAAGTAGCTGGGTGGATGTaGGAACTCATAGAAGTAGACAGGGGCATGGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GWSDILEVAGWM*ELIEVDRGMGA Trigger: CGCTCCCATGCCCCTGTCTACTTCTATGAGTTCCAACATCCACCCAGCTACTTCAAGGATGTCAGACCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 72 bp | AGGAATCTCATCAGCATGGTCAGCCTTCACGTGGGGTaGTCTGACATCCTTGAAGTAGCTGGGTGGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RNLISMVSLHVG*SDILEVAGWML Trigger: CAACATCCACCCAGCTACTTCAAGGATGTCAGACCACCCCACGTGAAGGCTGACCATGCTGATGAGATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS GCA 72 bp | CAGCATGTCAAGATTTTGCAGACACATGGCCGGATGTaGAGTTCCATCTCTCACACCACTCCATGGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QHVKILQTHGRM*SSISHTTPWFR Trigger: CCTGAACCATGGAGTGGTGTGAGAGATGGAACTGCACATCCGGCCATGTGTCTGCAAAATCTTGACATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 72 bp | AGGAAGGTGTGGACACCAGCTTTAGTGTCCTTCACGTaGATAAGGCTGCCTTGGATCTGTCCTGTATGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RKVWTPALVSFT*IRLPWICPVCV Trigger: CACACATACAGGACAGATCCAAGGCAGCCTTATCCACGTGAAGGACACTAAAGCTGGTGTCCACACCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS GCA 72 bp | CAGGTCACTACACTCAGGAGGCAGCATCATTTGTACTaGTGTATCCTTCAGAACAGCCTGCAGGTTCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QVTTLRRQHHLY*CILQNSLQVLS Trigger: AGAGAGAACCTGCAGGCTGTTCTGAAGGATACAGCAGTACAAATGATGCTGCCTCCTGAGTGTAGTGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 72 bp | CTGCTTCATTCAGCATGTCAAGATTTTGCAGACACATaGCCGGATGTGCAGTTCCATCTCTCACACCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLHSACQDFADT*PDVQFHLSHHS Trigger: GGAGTGGTGTGAGAGATGGAACTGCACATCCGGCCATGTGTCTGCAAAATCTTGACATGCTGAATGAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 72 bp | CCAGTGCTGAAAAAGCCCAGGACACCCAGACGATACTaGATAGTAACAACCACCAAGTCCTCATTGACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PVLKKPRTPRRY*IVTTTKSSLTV Trigger: GACAGTCAATGAGGACTTGGTGGTTGTTACTATCCAGTATCGTCTGGGTGTCCTGGGCTTTTTCAGCACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 72 bp | TCTCCCATCATCTCTGTGAACTGTATTTGGAGGGTCTaGGCATCCTCAGTGTCCCCCATGTACTCTTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SPIISVNCIWRV*ASSVSPMYSSI Trigger: AATGGAAGAGTACATGGGGGACACTGAGGATGCCCAGACCCTCCAAATACAGTTCACAGAGATGATGGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 72 bp | AAGAAGGACGCAAAGACAAAAGGAATCTCATCAGCATaGTCAGCCTTCACGTGGGGTGGTCTGACATCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KKDAKTKGISSA*SAFTWGGLTSL Trigger: CAAGGATGTCAGACCACCCCACGTGAAGGCTGACCATGCTGATGAGATTCCTTTTGTCTTTGCGTCCTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CAA 72 bp | ATCTGGCAGGCCTGCTTCATTCAGCATGTCAAGATTTaGCAGACACATGGCCGGATGTGCAGTTCCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IWQACFIQHVKI*QTHGRMCSSIS Trigger: AGAGATGGAACTGCACATCCGGCCATGTGTCTGCAAAATCTTGACATGCTGAATGAAGCAGGCCTGCCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CAA 90 bp | ATCATCTTGAAGACCTTGTTAATAGCCAGAATCTCTGCTTCACTTTaGCCTCTCAGACAGCGCACCAGGGCCTGGGAATCCATAGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: IILKTLLIARISASL*PLRQRTRAWESIAS Trigger: TGAGGCTATGGATTCCCAGGCCCTGGTGCGCTGTCTGAGAGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGGTCTTCAAGATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CAA 90 bp | GGGAAGAACTCCCCATCCACCACAGCAGGGATCATCTTGAAGACCTaGTTAATAGCCAGAATCTCTGCTTCACTTTTGCCTCTCAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: GKNSPSTTAGIILKT*LIARISASLLPLRQ Trigger: CTGTCTGAGAGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGGTCTTCAAGATGATCCCTGCTGTGGTGGATGGGGAGTTCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS GCA 72 bp | AGATCCATCAAACATGGAAGCCATTCCTATAACCAGTaGACCTCCATGGATCCACACCATCACAGGCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RSIKHGSHSYNQ*TSMDPHHHRQV Trigger: AACCTGCCTGTGATGGTGTGGATCCATGGAGGTGCACTGGTTATAGGAATGGCTTCCATGTTTGATGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS GCA 72 bp | GATCATCTTGAAGACCTTGTTAATAGCCAGAATCTCTaGTTCACTTTTGCCTCTCAGACAGCGCACCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DHLEDLVNSQNL*FTFASQTAHQG Trigger: GCCCTGGTGCGCTGTCTGAGAGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGGTCTTCAAGATGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CCA 72 bp | AACATGAAATCTCCCATCATCTCTGTGAACTGTATTTaGAGGGTCTGGGCATCCTCAGTGTCCCCCATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: NMKSPIISVNCI*RVWASSVSPMY Trigger: GTACATGGGGGACACTGAGGATGCCCAGACCCTCCAAATACAGTTCACAGAGATGATGGGAGATTTCATGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CAA 72 bp | ACCAGCTTTAGTGTCCTTCACGTGGATAAGGCTGCCTaGGATCTGTCCTGTATGTGTGTTTCTGATGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TSFSVLHVDKAA*DLSCMCVSDGV Trigger: AACCCCATCAGAAACACACATACAGGACAGATCCAAGGCAGCCTTATCCACGTGAAGGACACTAAAGCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CAA 72 bp | GGGAAGAACTCCCCATCCACCACAGCAGGGATCATCTaGAAGACCTTGTTAATAGCCAGAATCTCTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GKNSPSTTAGII*KTLLIARISAS Trigger: TGAAGCAGAGATTCTGGCTATTAACAAGGTCTTCAAGATGATCCCTGCTGTGGTGGATGGGGAGTTCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CAA 72 bp | GTAGACAGGGGCATGGGAGCGTTGAAAATGTGCTACTaGGAGTGCAGGGATCACAAACATGAAATCTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VDRGMGALKMCY*ECRDHKHEISH Trigger: ATGGGAGATTTCATGTTTGTGATCCCTGCACTCCAAGTAGCACATTTTCAACGCTCCCATGCCCCTGTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CAA 90 bp | CATTTTCATATCTGGCAGGCCTGCTTCATTCAGCATGTCAAGATTTaGCAGACACATGGCCGGATGTGCAGTTCCATCTCTCACACCACT | + |
|
Preference number: 6 (lower is better) Translates to: HFHIWQACFIQHVKI*QTHGRMCSSISHTT Trigger: AGTGGTGTGAGAGATGGAACTGCACATCCGGCCATGTGTCTGCAAAATCTTGACATGCTGAATGAAGCAGGCCTGCCAGATATGAAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CAA 90 bp | AGGGATCACAAACATGAAATCTCCCATCATCTCTGTGAACTGTATTaGGAGGGTCTGGGCATCCTCAGTGTCCCCCATGTACTCTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RDHKHEISHHLCELY*EGLGILSVPHVLFH Trigger: ATGGAAGAGTACATGGGGGACACTGAGGATGCCCAGACCCTCCAAATACAGTTCACAGAGATGATGGGAGATTTCATGTTTGTGATCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS CAA 90 bp | CTCATAGAAGTAGACAGGGGCATGGGAGCGTTGAAAATGTGCTACTaGGAGTGCAGGGATCACAAACATGAAATCTCCCATCATCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LIEVDRGMGALKMCY*ECRDHKHEISHHLC Trigger: ACAGAGATGATGGGAGATTTCATGTTTGTGATCCCTGCACTCCAAGTAGCACATTTTCAACGCTCCCATGCCCCTGTCTACTTCTATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS TCA 72 bp | TCATCATTGTTGACACCAATGATGCTGGGGACAGGGTaGAAATCCTCAGATGCCAACAACTCTTTGGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLLTPMMLGTG*KSSDANNSLGC Trigger: GCATCCCAAAGAGTTGTTGGCATCTGAGGATTTTCACCCTGTCCCCAGCATCATTGGTGTCAACAATGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS CAA 72 bp | TCCCCATCCACCACAGCAGGGATCATCTTGAAGACCTaGTTAATAGCCAGAATCTCTGCTTCACTTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPSTTAGIILKT*LIARISASLLP Trigger: AGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGGTCTTCAAGATGATCCCTGCTGTGGTGGATGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS CAA 72 bp | AAACATGAAATCTCCCATCATCTCTGTGAACTGTATTaGGAGGGTCTGGGCATCCTCAGTGTCCCCCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: KHEISHHLCELY*EGLGILSVPHV Trigger: TACATGGGGGACACTGAGGATGCCCAGACCCTCCAAATACAGTTCACAGAGATGATGGGAGATTTCATGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS TCA 72 bp | CTCTGGTTATTCCTTTTATCATCTGAGCAGAGCCCATaGCCACAGGAATGGACCAGCCAAACTCATCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: LWLFLLSSEQSP*PQEWTSQTHHC Trigger: ACAATGATGAGTTTGGCTGGTCCATTCCTGTGGTCATGGGCTCTGCTCAGATGATAAAAGGAATAACCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
||
| CDS GCA 72 bp | ATAGAAGTAGACAGGGGCATGGGAGCGTTGAAAATGTaGTACTTGGAGTGCAGGGATCACAAACATGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: IEVDRGMGALKM*YLECRDHKHEI Trigger: GATTTCATGTTTGTGATCCCTGCACTCCAAGTAGCACATTTTCAACGCTCCCATGCCCCTGTCTACTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CAA 90 bp | AGGACACCCAGACGATACTGGATAGTAACAACCACCAAGTCCTCATaGACTGTCAATAGAGATCCATCAAACATGGAAGCCATTCCTATA | + |
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Preference number: 6 (lower is better) Translates to: RTPRRYWIVTTTKSS*TVNRDPSNMEAIPI Trigger: TATAGGAATGGCTTCCATGTTTGATGGATCTCTATTGACAGTCAATGAGGACTTGGTGGTTGTTACTATCCAGTATCGTCTGGGTGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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| CDS CAA 72 bp | AGACGATACTGGATAGTAACAACCACCAAGTCCTCATaGACTGTCAATAGAGATCCATCAAACATGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: RRYWIVTTTKSS*TVNRDPSNMEA Trigger: GGCTTCCATGTTTGATGGATCTCTATTGACAGTCAATGAGGACTTGGTGGTTGTTACTATCCAGTATCGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055052.6 |
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