RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CES2B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050097

Ensembl transcript IDs: ENSMUST00000059449.7, ENSMUST00000163042.2

Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCTTAGCTCCTGGATCTTCTGGGACAGAGTCTTGGTCCAGAACTaGAGCCTTCTGGACTTCAGGGCTCGACCCACAGCAGGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: ALSSWIFWDRVLVQN*SLLDFRARPTAGWV
Trigger: CACCCAGCCTGCTGTGGGTCGAGCCCTGAAGTCCAGAAGGCTGCAGTTCTGGACCAAGACTCTGTCCCAGAAGATCCAGGAGCTAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 90 bp CCTGGATCTTCTGGGACAGAGTCTTGGTCCAGAACTGCAGCCTTCTaGACTTCAGGGCTCGACCCACAGCAGGCTGGGTGTCCAGCTGCA +
Preference number: 1 (lower is better)
Translates to: PGSSGTESWSRTAAF*TSGLDPQQAGCPAA
Trigger: TGCAGCTGGACACCCAGCCTGCTGTGGGTCGAGCCCTGAAGTCCAGAAGGCTGCAGTTCTGGACCAAGACTCTGTCCCAGAAGATCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 90 bp CAGACACATGGCTGGATGTGCAGTTCCATCTCTCACACCACTCCATaGCTCAGGGGCCTCAGGAGGTGCAAAGCGCAGTGGTCCTACAGG +
Preference number: 1 (lower is better)
Translates to: QTHGWMCSSISHTTP*LRGLRRCKAQWSYR
Trigger: CCTGTAGGACCACTGCGCTTTGCACCTCCTGAGGCCCCTGAGCCATGGAGTGGTGTGAGAGATGGAACTGCACATCCAGCCATGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR TCA 90 bp AATCTCTGCTTCACTTTTGCCTCTCAGACAGCGCACCAGGGCCTCTaGGTCCATGGCCTCACATCCAGAGAGCTTGGCCACCGTAGTGGA +
Preference number: 1 (lower is better)
Translates to: NLCFTFASQTAHQGL*VHGLTSRELGHRSG
Trigger: TCCACTACGGTGGCCAAGCTCTCTGGATGTGAGGCCATGGACTCAGAGGCCCTGGTGCGCTGTCTGAGAGGCAAAAGTGAAGCAGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 90 bp TGTCCTGAGAAGCCCTTAGCTCCTGGATCTTCTGGGACAGAGTCTTaGTCCAGAACTGCAGCCTTCTGGACTTCAGGGCTCGACCCACAG +
Preference number: 1 (lower is better)
Translates to: CPEKPLAPGSSGTES*SRTAAFWTSGLDPQ
Trigger: CTGTGGGTCGAGCCCTGAAGTCCAGAAGGCTGCAGTTCTGGACCAAGACTCTGTCCCAGAAGATCCAGGAGCTAAGGGCTTCTCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 90 bp CCACCACCAAGTCCTCAATGGCTGCCAATAGAGATCCATCGTACATaGAAGCCATGCCTGCAACCAGTCCACCTCCGTGAATCCATACCA +
Preference number: 1 (lower is better)
Translates to: PPPSPQWLPIEIHRT*KPCLQPVHLRESIP
Trigger: TGGTATGGATTCACGGAGGTGGACTGGTTGCAGGCATGGCTTCCATGTACGATGGATCTCTATTGGCAGCCATTGAGGACTTGGTGGTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR GCA 90 bp TATCTCCTTCATTACACCCAGATTTTGCAGACACATGGCTGGATGTaGAGTTCCATCTCTCACACCACTCCATGGCTCAGGGGCCTCAGG +
Preference number: 1 (lower is better)
Translates to: YLLHYTQILQTHGWM*SSISHTTPWLRGLR
Trigger: CCTGAGGCCCCTGAGCCATGGAGTGGTGTGAGAGATGGAACTGCACATCCAGCCATGTGTCTGCAAAATCTGGGTGTAATGAAGGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR GCA 90 bp TTTGGACATGGGGGACACAACATGGGAAGACACACTTGTGCCACCTaGAGACTCGCCAAAAATAGTGACCCGGTCAGGTTTGCCTCCAAA +
Preference number: 1 (lower is better)
Translates to: FGHGGHNMGRHTCAT*RLAKNSDPVRFASK
Trigger: TTTGGAGGCAAACCTGACCGGGTCACTATTTTTGGCGAGTCTGCAGGTGGCACAAGTGTGTCTTCCCATGTTGTGTCCCCCATGTCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 90 bp GGACAGGGTGAAAATCCTCAGATGCCAACAACTCTTTGGGATGCCTaGGGAAGAACTCTCCATCCACCACAGCAGGGATCATCTGGACAA +
Preference number: 1 (lower is better)
Translates to: GQGENPQMPTTLWDA*GRTLHPPQQGSSGQ
Trigger: TTGTCCAGATGATCCCTGCTGTGGTGGATGGAGAGTTCTTCCCCAGGCATCCCAAAGAGTTGTTGGCATCTGAGGATTTTCACCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 90 bp ATGATGGCTCCATGGAAGAGTCCTTTGGACATGGGGGACACAACATaGGAAGACACACTTGTGCCACCTGCAGACTCGCCAAAAATAGTG +
Preference number: 1 (lower is better)
Translates to: MMAPWKSPLDMGDTT*EDTLVPPADSPKIV
Trigger: CACTATTTTTGGCGAGTCTGCAGGTGGCACAAGTGTGTCTTCCCATGTTGTGTCCCCCATGTCCAAAGGACTCTTCCATGGAGCCATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 90 bp GGATGCCTGGGGAAGAACTCTCCATCCACCACAGCAGGGATCATCTaGACAAGCTTGTTAATAGCCAGAATCTCTGCTTCACTTTTGCCT +
Preference number: 1 (lower is better)
Translates to: GCLGKNSPSTTAGII*TSLLIARISASLLP
Trigger: AGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGCTTGTCCAGATGATCCCTGCTGTGGTGGATGGAGAGTTCTTCCCCAGGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 90 bp ACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATaGAGGAGTGTCCCTTTTTCTCCACATGCTTGCCAGTATCTGCTG +
Preference number: 1 (lower is better)
Translates to: TDFQSGCTSLQSHQQ*RSVPFSPHACQYLL
Trigger: CAGCAGATACTGGCAAGCATGTGGAGAAAAAGGGACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 90 bp GCTGGCATATGCAATTGTGTCTGTCTTTGGTGGTTGATTATGGTATaGATCCCTGGATGGGACAGTCTCTGCATGGTCTTTCCTTCCATC +
Preference number: 1 (lower is better)
Translates to: AGICNCVCLWWLIMV*IPGWDSLCMVFPSI
Trigger: GATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 90 bp AACATGAAGTCTTCCATCATCTCTGTGAACTGTATTTGGAGGGTCTaGGCATCCTCAGTGTCCCCCATGTACTCTTCCATTAGCAGGTCA +
Preference number: 1 (lower is better)
Translates to: NMKSSIISVNCIWRV*ASSVSPMYSSISRS
Trigger: TGACCTGCTAATGGAAGAGTACATGGGGGACACTGAGGATGCCCAGACCCTCCAAATACAGTTCACAGAGATGATGGAAGACTTCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR GCA 90 bp ACAGGTGGCAGCTTCAATTTTATCTCCTTCATTACACCCAGATTTTaGAGACACATGGCTGGATGTGCAGTTCCATCTCTCACACCACTC +
Preference number: 1 (lower is better)
Translates to: TGGSFNFISFITPRF*RHMAGCAVPSLTPL
Trigger: GAGTGGTGTGAGAGATGGAACTGCACATCCAGCCATGTGTCTGCAAAATCTGGGTGTAATGAAGGAGATAAAATTGAAGCTGCCACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 90 bp ATGCAATTGTGTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTaGATGGGACAGTCTCTGCATGGTCTTTCCTTCCATCTCATCTCC +
Preference number: 1 (lower is better)
Translates to: MQLCLSLVVDYGMDP*MGQSLHGLSFHLIS
Trigger: GGAGATGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR TCA 90 bp AGCAAAATCTTGCTGGCATATGCAATTGTGTCTGTCTTTGGTGGTTaGTTATGGTATGGATCCCTGGATGGGACAGTCTCTGCATGGTCT +
Preference number: 1 (lower is better)
Translates to: SKILLAYAIVSVFGG*LWYGSLDGTVSAWS
Trigger: AGACCATGCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGCAAGATTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR TCA 90 bp TTCAAAACAGCCTGCAGGTTCTCTCTGGTTATTTCCTTTATTGTTTaGGCAGAGCCCATGACCACAGGAATGGTCCAACCAAACTCATCG +
Preference number: 1 (lower is better)
Translates to: FKTACRFSLVISFIV*AEPMTTGMVQPNSS
Trigger: CGATGAGTTTGGTTGGACCATTCCTGTGGTCATGGGCTCTGCTCAAACAATAAAGGAAATAACCAGAGAGAACCTGCAGGCTGTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR GCA 90 bp CTTTGGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTaGATGGTCTTTCCTTCCATCTCATCTCCTAACTTTGTCTCTGTA +
Preference number: 1 (lower is better)
Translates to: LWWLIMVWIPGWDSL*MVFPSISSPNFVSV
Trigger: TACAGAGACAAAGTTAGGAGATGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 90 bp AATTGTGTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATaGGACAGTCTCTGCATGGTCTTTCCTTCCATCTCATCTCCTAAC +
Preference number: 1 (lower is better)
Translates to: NCVCLWWLIMVWIPG*DSLCMVFPSISSPN
Trigger: GTTAGGAGATGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR GCA 90 bp GAGCATGTGTCCTTATTACCAGTTGGAACATCTTCTGGGTATATATaGCCAGGAGAGGTATTGCTGGATCTTCTGGTAGTACTATGTCCA +
Preference number: 1 (lower is better)
Translates to: EHVSLLPVGTSSGYI*PGEVLLDLLVVLCP
Trigger: TGGACATAGTACTACCAGAAGATCCAGCAATACCTCTCCTGGGCATATATACCCAGAAGATGTTCCAACTGGTAATAAGGACACATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 90 bp GAACATAGTGGAGCATGTGTCCTTATTACCAGTTGGAACATCTTCTaGGTATATATGCCCAGGAGAGGTATTGCTGGATCTTCTGGTAGT +
Preference number: 1 (lower is better)
Translates to: EHSGACVLITSWNIF*VYMPRRGIAGSSGS
Trigger: ACTACCAGAAGATCCAGCAATACCTCTCCTGGGCATATATACCCAGAAGATGTTCCAACTGGTAATAAGGACACATGCTCCACTATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 90 bp TTTCAGCAAAATCTTGCTGGCATATGCAATTGTGTCTGTCTTTGGTaGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGCATG +
Preference number: 1 (lower is better)
Translates to: FQQNLAGICNCVCLW*LIMVWIPGWDSLCM
Trigger: CATGCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGCAAGATTTTGCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 90 bp TTCTTTCAGCAAAATCTTGCTGGCATATGCAATTGTGTCTGTCTTTaGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGC +
Preference number: 1 (lower is better)
Translates to: FFQQNLAGICNCVCL*WLIMVWIPGWDSLC
Trigger: GCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGCAAGATTTTGCTGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR TCA 90 bp GAGTGTCCCTTTTTCTCCACATGCTTGCCAGTATCTGCTGTCACATaGATTTTTGATAATATCCATTATGACTGGTGTGAGGTGGAATCT +
Preference number: 1 (lower is better)
Translates to: ECPFFSTCLPVSAVT*IFDNIHYDWCEVES
Trigger: AGATTCCACCTCACACCAGTCATAATGGATATTATCAAAAATTCATGTGACAGCAGATACTGGCAAGCATGTGGAGAAAAAGGGACACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR GCA 90 bp ACCCTCACAAGAGTCAGCTATATCAAGGTTCTTTCAGCAAAATCTTaGTGGCATATGCAATTGTGTCTGTCTTTGGTGGTTGATTATGGT +
Preference number: 1 (lower is better)
Translates to: TLTRVSYIKVLSAKS*WHMQLCLSLVVDYG
Trigger: ACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGCAAGATTTTGCTGAAAGAACCTTGATATAGCTGACTCTTGTGAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR GCA 90 bp TTGGAACTCATAAAAGTAGACAGAAGCATGGGAACGCTGAAAATATaGTACTTGAAGTGCAGGGATCACAAACATGAAGTCTTCCATCAT +
Preference number: 1 (lower is better)
Translates to: LELIKVDRSMGTLKI*YLKCRDHKHEVFHH
Trigger: ATGATGGAAGACTTCATGTTTGTGATCCCTGCACTTCAAGTAGCATATTTTCAGCGTTCCCATGCTTCTGTCTACTTTTATGAGTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 90 bp TCATTTGAAGAAGGTTCTGGAGTTGGAGAAAAGGAGAGGAAAGTTTaGGAGAAGATAATGGAAAGAAGGAAGCAAAGATGGAAGGAAGAA +
Preference number: 1 (lower is better)
Translates to: SFEEGSGVGEKERKV*EKIMERRKQRWKEE
Trigger: TTCTTCCTTCCATCTTTGCTTCCTTCTTTCCATTATCTTCTCCCAAACTTTCCTCTCCTTTTCTCCAACTCCAGAACCTTCTTCAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 90 bp TATCCACTTATCAGTGAGTGCATATCATCTGAGTTCTTTTGTGATTaGGTTACCTCACTCAGGATGATACCCTCCATATCTATCCATTTG +
Preference number: 1 (lower is better)
Translates to: YPLISECISSEFFCD*VTSLRMIPSISIHL
Trigger: CAAATGGATAGATATGGAGGGTATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCAGATGATATGCACTCACTGATAAGTGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 90 bp GTATCTTTGTGCCCCATTCTAAGGAGGGATGAAGTATCCACACTTTaGTCTTCGTTCTTCTTGAGTTTCATGTGTTTTGCAAATTGTATC +
Preference number: 1 (lower is better)
Translates to: VSLCPILRRDEVSTL*SSFFLSFMCFANCI
Trigger: GATACAATTTGCAAAACACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGATACTTCATCCCTCCTTAGAATGGGGCACAAAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CCA 90 bp CTTCAGGGCTCGACCCACAGCAGGCTGGGTGTCCAGCTGCAGGTACTGCTCATCATCCCCAGTTGCCTCTaGCATGCTGGTCTCCAGTGC +
Preference number: 2 (lower is better)
Translates to: LQGSTHSRLGVQLQVLLIIPSCL*HAGLQC
Trigger: GCACTGGAGACCAGCATGCCAGAGGCAACTGGGGAT...GATGAGCAGTACCTGCAGCTGGACACCCAGCCTGCTGTGGGTCGAGCCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR CCA 90 bp CCAGAACTGCAGCCTTCTGGACTTCAGGGCTCGACCCACAGCAGGCTGGGTGTCTGTATTTGGAGGGTCTaGGCATCCTCAGTGTCCCCC +
Preference number: 2 (lower is better)
Translates to: PELQPSGLQGSTHSRLGVCIWRV*ASSVSP
Trigger: GGGGGACACTGAGGATGCCCAGACCCTCCAAATACA...GACACCCAGCCTGCTGTGGGTCGAGCCCTGAAGTCCAGAAGGCTGCAGTTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR TCA 90 bp CCAGAACTGCAGCCTTCTGGACTTCAGGGCTCGACCCACAGCAGGCTGGGTGTCATGCTGGGGACAGGGTaGAAATCCTCAGATGCCAAC +
Preference number: 2 (lower is better)
Translates to: PELQPSGLQGSTHSRLGVMLGTG*KSSDAN
Trigger: GTTGGCATCTGAGGATTTTCACCCTGTCCCCAGCAT...GACACCCAGCCTGCTGTGGGTCGAGCCCTGAAGTCCAGAAGGCTGCAGTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR TCA 90 bp CTTCAGGGCTCGACCCACAGCAGGCTGGGTGTCCAGCTGCAGGTACTGCTCATCTTTGAGCAGAGCCCATaGCCACAGGAATGGTCCAAC +
Preference number: 2 (lower is better)
Translates to: LQGSTHSRLGVQLQVLLIFEQSP*PQEWSN
Trigger: GTTGGACCATTCCTGTGGTCATGGGCTCTGCTCAAA...GATGAGCAGTACCTGCAGCTGGACACCCAGCCTGCTGTGGGTCGAGCCCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR GCA 90 bp CCAGAACTGCAGCCTTCTGGACTTCAGGGCTCGACCCACAGCAGGCTGGGTGTCCAGTTGCCTCTGGCATaGTGGTCTCCAGTGCTAAAA +
Preference number: 2 (lower is better)
Translates to: PELQPSGLQGSTHSRLGVQLPLA*WSPVLK
Trigger: TTTTAGCACTGGAGACCAGCATGCCAGAGGCAACTG...GACACCCAGCCTGCTGTGGGTCGAGCCCTGAAGTCCAGAAGGCTGCAGTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR CCA 90 bp CCAGAACTGCAGCCTTCTGGACTTCAGGGCTCGACCCACAGCAGGCTGGGTGTCACTCTTTGGGATGCCTaGGGAAGAACTCTCCATCCA +
Preference number: 2 (lower is better)
Translates to: PELQPSGLQGSTHSRLGVTLWDA*GRTLHP
Trigger: TGGATGGAGAGTTCTTCCCCAGGCATCCCAAAGAGT...GACACCCAGCCTGCTGTGGGTCGAGCCCTGAAGTCCAGAAGGCTGCAGTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR TCA 90 bp CCTTTGGACATGGGGGACACAACATGGGAAGACACACTTGTGCCACCTGCAGACCGTAGGGCAGCCACTTaGTCCAGGAATCCCCAGTTG +
Preference number: 2 (lower is better)
Translates to: PLDMGDTTWEDTLVPPADRRAAT*SRNPQL
Trigger: CAACTGGGGATTCCTGGATCAAGTGGCTGCCCTACG...GTCTGCAGGTGGCACAAGTGTGTCTTCCCATGTTGTGTCCCCCATGTCCAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR GCA 90 bp TTGGGATGCCTGGGGAAGAACTCTCCATCCACCACAGCAGGGATCATCTGGACACATGGAAGCCATGCCTaGAACCAGTCCACCTCCGTG +
Preference number: 2 (lower is better)
Translates to: LGCLGKNSPSTTAGIIWTHGSHA*NQSTSV
Trigger: CACGGAGGTGGACTGGTTGCAGGCATGGCTTCCATG...TGTCCAGATGATCCCTGCTGTGGTGGATGGAGAGTTCTTCCCCAGGCATCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR CCA 90 bp CCAGAACTGCAGCCTTCTGGACTTCAGGGCTCGACCCACAGCAGGCTGGGTGTCTTGCAGACACATGGCTaGATGTGCAGTTCCATCTCT +
Preference number: 2 (lower is better)
Translates to: PELQPSGLQGSTHSRLGVLQTHG*MCSSIS
Trigger: AGAGATGGAACTGCACATCCAGCCATGTGTCTGCAA...GACACCCAGCCTGCTGTGGGTCGAGCCCTGAAGTCCAGAAGGCTGCAGTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR CCA 90 bp CTTCAGGGCTCGACCCACAGCAGGCTGGGTGTCCAGCTGCAGGTACTGCTCATCACAGCAGGGATCATCTaGACAAGCTTGTTAATAGCC +
Preference number: 2 (lower is better)
Translates to: LQGSTHSRLGVQLQVLLITAGII*TSLLIA
Trigger: GGCTATTAACAAGCTTGTCCAGATGATCCCTGCTGT...GATGAGCAGTACCTGCAGCTGGACACCCAGCCTGCTGTGGGTCGAGCCCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CAA 90 bp TCCATCCCACCCGCTCCTGCTTCCTGGCCCTGGTATACACTTGTATaGGGGCATATAATATTTGCAAGACCAAGGGCCTCTCCTCCCAAT +
Preference number: 2 (lower is better)
Translates to: SIPPAPASWPWYTLV*GHIIFARPRASPPN
Trigger: ATTGGGAGGAGAGGCCCTTGGTCTTGCAAATATTATATGCCCCAATACAAGTGTATACCAGGGCCAGGAAGCAGGAGCGGGTGGGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CCA 90 bp CCAGAACTGCAGCCTTCTGGACTTCAGGGCTCGACCCACAGCAGGCTGGGTGTCCCTGCAGGTTCTCTCTaGTTATTTCCTTTATTGTTT +
Preference number: 2 (lower is better)
Translates to: PELQPSGLQGSTHSRLGVPAGSL*LFPLLF
Trigger: AAACAATAAAGGAAATAACCAGAGAGAACCTGCAGG...GACACCCAGCCTGCTGTGGGTCGAGCCCTGAAGTCCAGAAGGCTGCAGTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CAA 90 bp ATCATCTGGACAAGCTTGTTAATAGCCAGAATCTCTGCTTCACTTTaGCCTCTCAGACAGCGCACCAGGGCCTCTGAGTCCATGGCCTCA +
Preference number: 2 (lower is better)
Translates to: IIWTSLLIARISASL*PLRQRTRASESMAS
Trigger: TGAGGCCATGGACTCAGAGGCCCTGGTGCGCTGTCTGAGAGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGCTTGTCCAGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR TCA 90 bp AACTCTCCATCCACCACAGCAGGGATCATCTGGACAAGCTTGTTAATAGCCAGAACCAGTCCACCTCCGTaGATCCATACCATCACAGGC +
Preference number: 2 (lower is better)
Translates to: NSPSTTAGIIWTSLLIARTSPPP*IHTITG
Trigger: GCCTGTGATGGTATGGATTCACGGAGGTGGACTGGT...TCTGGCTATTAACAAGCTTGTCCAGATGATCCCTGCTGTGGTGGATGGAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR CCA 90 bp CCTTTGGACATGGGGGACACAACATGGGAAGACACACTTGTGCCACCTGCAGACGATTTTGCAGACACATaGCTGGATGTGCAGTTCCAT +
Preference number: 2 (lower is better)
Translates to: PLDMGDTTWEDTLVPPADDFADT*LDVQFH
Trigger: ATGGAACTGCACATCCAGCCATGTGTCTGCAAAATC...GTCTGCAGGTGGCACAAGTGTGTCTTCCCATGTTGTGTCCCCCATGTCCAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR TCA 90 bp CTTGTGCCACCTGCAGACTCGCCAAAAATAGTGACCCGGTCAGGTTTGCCTCCAGCTCAAAGACTGAGGTaGCAAATGCTATGTAAGTGT +
Preference number: 2 (lower is better)
Translates to: LVPPADSPKIVTRSGLPPAQRLR*QMLCKC
Trigger: ACACTTACATAGCATTTGTCACCTCAGTCTTTGAGC...TGGAGGCAAACCTGACCGGGTCACTATTTTTGGCGAGTCTGCAGGTGGCACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR TCA 90 bp TGGACAAGCTTGTTAATAGCCAGAATCTCTGCTTCACTTTTGCCTCTCAGACAGCCACCCCACTCTCCATaGTGGCTCCATGGAAGAGTC +
Preference number: 2 (lower is better)
Translates to: WTSLLIARISASLLPLRQPPHSP*WLHGRV
Trigger: GACTCTTCCATGGAGCCATCATGGAGAGTGGGGTGG...CTGTCTGAGAGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGCTTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CAA 90 bp GGGAAGAACTCTCCATCCACCACAGCAGGGATCATCTGGACAAGCTaGTTAATAGCCAGAATCTCTGCTTCACTTTTGCCTCTCAGACAG +
Preference number: 2 (lower is better)
Translates to: GKNSPSTTAGIIWTS*LIARISASLLPLRQ
Trigger: CTGTCTGAGAGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGCTTGTCCAGATGATCCCTGCTGTGGTGGATGGAGAGTTCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR GCA 90 bp ATGTACTCTTCCATTAGCAGGTCACTACACTCAGGAGGCAGCATCAGTTGTGCTTCTCTGCTTCACTTTTaGCTCTCAGACAGCGCACCA +
Preference number: 2 (lower is better)
Translates to: MYSSISRSLHSGGSISCASLLHF*LSDSAP
Trigger: TGGTGCGCTGTCTGAGAGGCAAAAGTGAAGCAGAGA...AGCACAACTGATGCTGCCTCCTGAGTGTAGTGACCTGCTAATGGAAGAGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR TCA 90 bp TATGGATCCCTGGATGGGACAGTCTCTGCATGGTCTTTCCTTCCATCTCATCTCAAGGAACTTCCAGACTaGTTTCCAGAGTGGTTGTAC +
Preference number: 2 (lower is better)
Translates to: YGSLDGTVSAWSFLPSHLKELPD*FPEWLY
Trigger: GTACAACCACTCTGGAAATCAGTCTGGAAGTTCCTT...GAGATGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAGGGATCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR GCA 90 bp ATCTGGACAAGCTTGTTAATAGCCAGAATCTCTGCTTCACTTTTGCCTCTCAGACGTACATGGAAGCCATaGCTGCAACCAGTCCACCTC +
Preference number: 2 (lower is better)
Translates to: IWTSLLIARISASLLPLRRTWKP*LQPVHL
Trigger: GAGGTGGACTGGTTGCAGGCATGGCTTCCATGTACG...TCTGAGAGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGCTTGTCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CAA 90 bp CAGCAAAATCTTGCTGGCATATGCAATTGTGTCTGTCTTTGGTGGTaGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGCATGGTC +
Preference number: 2 (lower is better)
Translates to: QQNLAGICNCVCLWW*IMVWIPGWDSLCMV
Trigger: GACCATGCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGCAAGATTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 90 bp GACAGGTGGCAGCTTCAATTTTATCTCCTTCATTACACCCAGATTTaGCAGACACATGGCTGGATGTGCAGTTCCATCTCTCACACCACT +
Preference number: 2 (lower is better)
Translates to: DRWQLQFYLLHYTQI*QTHGWMCSSISHTT
Trigger: AGTGGTGTGAGAGATGGAACTGCACATCCAGCCATGTGTCTGCAAAATCTGGGTGTAATGAAGGAGATAAAATTGAAGCTGCCACCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CAA 90 bp CCATTAGCAGGTCACTACACTCAGGAGGCAGCATCAGTTGTGCTGTaGTATTCTTCAAAACAGCCTGCAGGTTCTCTCTGGTTATTTCCT +
Preference number: 2 (lower is better)
Translates to: PLAGHYTQEAASVVL*YSSKQPAGSLWLFP
Trigger: AGGAAATAACCAGAGAGAACCTGCAGGCTGTTTTGAAGAATACAACAGCACAACTGATGCTGCCTCCTGAGTGTAGTGACCTGCTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR GCA 90 bp GTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGCTTTTCTCCACATGCTTaGCAGTATCTGCTGTCACAT +
Preference number: 2 (lower is better)
Translates to: VCLWWLIMVWIPGWDSLCFSPHA*QYLLSH
Trigger: ATGTGACAGCAGATACTGGCAAGCATGTGGAGAAAA...GCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR GCA 90 bp TGGACAAGCTTGTTAATAGCCAGAATCTCTGCTTCACTTTTGCCTCTCAGACAGACACATGGCTGGATGTaGAGTTCCATCTCTCACACC +
Preference number: 2 (lower is better)
Translates to: WTSLLIARISASLLPLRQTHGWM*SSISHT
Trigger: GGTGTGAGAGATGGAACTGCACATCCAGCCATGTGT...CTGTCTGAGAGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGCTTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR CCA 90 bp TGTATTTGCCAGGCACTGGCATACCCTCACAAGAGTCAGCTATATCAAGGTTCTCTGTTGAGGGATATCTaGGTTCTTTCCAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: CICQALAYPHKSQLYQGSLLRDI*VLSSFW
Trigger: CCAGAAGCTGGAAAGAACCCAGATATCCCTCAACAG...AGAACCTTGATATAGCTGACTCTTGTGAGGGTATGCCAGTGCCTGGCAAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CCA 90 bp TCCCCCTCAGTGAAGTCAAGTTTCATGTCCCAGAAGAAGTACCCAAAGACAAAAACACCCAGACGATACTaGATAGTGACCACCACCAAG +
Preference number: 2 (lower is better)
Translates to: SPSVKSSFMSQKKYPKTKTPRRY*IVTTTK
Trigger: CTTGGTGGTGGTCACTATCCAGTATCGTCTGGGTGT...TTTTGTCTTTGGGTACTTCTTCTGGGACATGAAACTTGACTTCACTGAGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR CCA 90 bp TCCCCCTCAGTGAAGTCAAGTTTCATGTCCCAGAAGAAGTACCCAAAGACAAAAAGAGTCCTTTGGACATaGGGGACACAACATGGGAAG +
Preference number: 2 (lower is better)
Translates to: SPSVKSSFMSQKKYPKTKRVLWT*GTQHGK
Trigger: CTTCCCATGTTGTGTCCCCCATGTCCAAAGGACTCT...TTTTGTCTTTGGGTACTTCTTCTGGGACATGAAACTTGACTTCACTGAGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR TCA 90 bp GGAACTTCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACGCTCAAAGACTGAGGTaGCAAATGCTATGTAAGTGT +
Preference number: 2 (lower is better)
Translates to: GTSRLISRVVVQACNPTNAQRLR*QMLCKC
Trigger: ACACTTACATAGCATTTGTCACCTCAGTCTTTGAGC...GTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGAAGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR GCA 90 bp TTACCAGTTGGAACATCTTCTGGGTATATATGCCCAGGAGAGGTATTGCTGGATCCCTTTTTCTCCACATaGTTGCCAGTATCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: LPVGTSSGYICPGEVLLDPFFST*LPVSAV
Trigger: GACAGCAGATACTGGCAAGCATGTGGAGAAAAAGGG...ATCCAGCAATACCTCTCCTGGGCATATATACCCAGAAGATGTTCCAACTGGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR GCA 90 bp CATATTGTTGTTCCTCCTATAGGGTTACAGACCCCTTCAGCTCCTTGGGTACTTAGATGGGTATCTTTGTaGCCCATTCTAAGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: HIVVPPIGLQTPSAPWVLRWVSL*PILRRD
Trigger: ATCCCTCCTTAGAATGGGGCACAAAGATACCCATCT...AAGTACCCAAGGAGCTGAAGGGGTCTGTAACCCTATAGGAGGAACAACAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CCA 90 bp TGTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGAGAAGGTTCTGGAGTTaGAGAAAAGGAGAGGAAAGT +
Preference number: 2 (lower is better)
Translates to: CLSLVVDYGMDPWMGQSLRRFWS*RKGEES
Trigger: ACTTTCCTCTCCTTTTCTCCAACTCCAGAACCTTCT...CAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CCA 90 bp GAGACACAAACTCAGGGGGTACCTGTTAGTTCATATTGTTGTTCCTCCTATAGGTATGGTATGGATCCCTaGATGGGACAGTCTCTGCAT +
Preference number: 2 (lower is better)
Translates to: ETQTQGVPVSSYCCSSYRYGMDP*MGQSLH
Trigger: ATGCAGAGACTGTCCCATCCAGGGATCCATACCATA...CCTATAGGAGGAACAACAATATGAACTAACAGGTACCCCCTGAGTTTGTGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CCA 90 bp TCTGGTTATTTCCTTTATTGTTTGAGCAGAGCCCATGACCACAGGAATGGTCCACATGGAAGAGTCCTTTaGACATGGGGGACACAACAT +
Preference number: 2 (lower is better)
Translates to: SGYFLYCLSRAHDHRNGPHGRVL*TWGTQH
Trigger: ATGTTGTGTCCCCCATGTCCAAAGGACTCTTCCATG...TGGACCATTCCTGTGGTCATGGGCTCTGCTCAAACAATAAAGGAAATAACCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CAA 90 bp GTTCTTTCAGCAAAATCTTGCTGGCATATGCAATTGTGTCTGTCTTaGGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTG +
Preference number: 2 (lower is better)
Translates to: VLSAKSCWHMQLCLS*VVDYGMDPWMGQSL
Trigger: CAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGCAAGATTTTGCTGAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR TCA 90 bp TGTATTTGCCAGGCACTGGCATACCCTCACAAGAGTCAGCTATATCAAGGTTCTAGCATCCATTTCATTTaGAGAAGGTTCTGGAGTTGG +
Preference number: 2 (lower is better)
Translates to: CICQALAYPHKSQLYQGSSIHFI*RRFWSW
Trigger: CCAACTCCAGAACCTTCTTCAAATGAAATGGATGCT...AGAACCTTGATATAGCTGACTCTTGTGAGGGTATGCCAGTGCCTGGCAAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR TCA 90 bp TGTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGGGTCTTCGTTCTTCTTaGGTTTCATGTGTTTTGCAA +
Preference number: 2 (lower is better)
Translates to: CLSLVVDYGMDPWMGQSLGLRSS*VSCVLQ
Trigger: TTGCAAAACACATGAAACTCAAGAAGAACGAAGACC...CAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CCA 90 bp GAGACACAAACTCAGGGGGTACCTGTTAGTTCATATTGTTGTTCCTCCTATAGGATGACTGGTGTGAGGTaGAATCTCAGGGTTGTTTTG +
Preference number: 2 (lower is better)
Translates to: ETQTQGVPVSSYCCSSYRMTGVR*NLRVVL
Trigger: CAAAACAACCCTGAGATTCCACCTCACACCAGTCAT...CCTATAGGAGGAACAACAATATGAACTAACAGGTACCCCCTGAGTTTGTGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CCA 90 bp CTGGATGGGACAGTCTCTGCATGGTCTTTCCTTCCATCTCATCTCCTAACTTTGGAAGTATCCACACTTTaGTCTTCGTTCTTCTTGAGT +
Preference number: 2 (lower is better)
Translates to: LDGTVSAWSFLPSHLLTLEVSTL*SSFFLS
Trigger: ACTCAAGAAGAACGAAGACCAAAGTGTGGATACTTC...CAAAGTTAGGAGATGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CCA 90 bp TGTATTTGCCAGGCACTGGCATACCCTCACAAGAGTCAGCTATATCAAGGTTCTTGTGTCTGTCTTTGGTaGTTGATTATGGTATGGATC +
Preference number: 2 (lower is better)
Translates to: CICQALAYPHKSQLYQGSCVCLW*LIMVWI
Trigger: GATCCATACCATAATCAACCACCAAAGACAGACACA...AGAACCTTGATATAGCTGACTCTTGTGAGGGTATGCCAGTGCCTGGCAAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CCA 90 bp TCTGACATCCTTGAGAGAGGCGATCTGATGTTGGAACTCATAAAAGTAGACAGAGGACGTAGAGACAGGTaGCAGCTTCAATTTTATCTC +
Preference number: 2 (lower is better)
Translates to: SDILERGDLMLELIKVDRGRRDR*QLQFYL
Trigger: GAGATAAAATTGAAGCTGCCACCTGTCTCTACGTCC...TCTGTCTACTTTTATGAGTTCCAACATCAGATCGCCTCTCTCAAGGATGTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR GCA 90 bp CATATTGTTGTTCCTCCTATAGGGTTACAGACCCCTTCAGCTCCTTGGGTACTTCTTTCAGCAAAATCTTaGTGGCATATGCAATTGTGT +
Preference number: 2 (lower is better)
Translates to: HIVVPPIGLQTPSAPWVLLSAKS*WHMQLC
Trigger: ACACAATTGCATATGCCAGCAAGATTTTGCTGAAAG...AAGTACCCAAGGAGCTGAAGGGGTCTGTAACCCTATAGGAGGAACAACAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR GCA 90 bp GGTTGGTCTGACATCCTTGAGAGAGGCGATCTGATGTTGGAACTCATAAAAGTATTCTTCAAAACAGCCTaGAGGTTCTCTCTGGTTATT +
Preference number: 2 (lower is better)
Translates to: GWSDILERGDLMLELIKVFFKTA*RFSLVI
Trigger: AATAACCAGAGAGAACCTGCAGGCTGTTTTGAAGAA...TACTTTTATGAGTTCCAACATCAGATCGCCTCTCTCAAGGATGTCAGACCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR CCA 90 bp TCCTGCTTCCTGGCCCTGGTATACACTTGTATTGGGGCATATAATATTTGCAAGAATATCCATTATGACTaGTGTGAGGTGGAATCTCAG +
Preference number: 2 (lower is better)
Translates to: SCFLALVYTCIGAYNICKNIHYD*CEVESQ
Trigger: CTGAGATTCCACCTCACACCAGTCATAATGGATATT...CTTGCAAATATTATATGCCCCAATACAAGTGTATACCAGGGCCAGGAAGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CCA 90 bp TCCTGCTTCCTGGCCCTGGTATACACTTGTATTGGGGCATATAATATTTGCAAGTCAGCAAAATCTTGCTaGCATATGCAATTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: SCFLALVYTCIGAYNICKSAKSC*HMQLCL
Trigger: CAGACACAATTGCATATGCCAGCAAGATTTTGCTGA...CTTGCAAATATTATATGCCCCAATACAAGTGTATACCAGGGCCAGGAAGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 90 bp AGCTATATCAAGGTTCTTTCAGCAAAATCTTGCTGGCATATGCAATaGTGTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATG +
Preference number: 2 (lower is better)
Translates to: SYIKVLSAKSCWHMQ*CLSLVVDYGMDPWM
Trigger: CATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGCAAGATTTTGCTGAAAGAACCTTGATATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR TCA 90 bp TTACCAGTTGGAACATCTTCTGGGTATATATGCCCAGGAGAGGTATTGCTGGATATTTGCATGGCTTGCTaGAATTTTGATGCAGTCAAT +
Preference number: 2 (lower is better)
Translates to: LPVGTSSGYICPGEVLLDICMAC*NFDAVN
Trigger: ATTGACTGCATCAAAATTTCAGCAAGCCATGCAAAT...ATCCAGCAATACCTCTCCTGGGCATATATACCCAGAAGATGTTCCAACTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR GCA 90 bp GCTATTGACTTTAAACCCCAAACACATTTCCTTATAAAGGGTACTAAAGCTCCGGGAACGCTGAAAATATaGTACTTGAAGTGCAGGGAT +
Preference number: 2 (lower is better)
Translates to: AIDFKPQTHFLIKGTKAPGTLKI*YLKCRD
Trigger: ATCCCTGCACTTCAAGTAGCATATTTTCAGCGTTCC...CGGAGCTTTAGTACCCTTTATAAGGAAATGTGTTTGGGGTTTAAAGTCAATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CAA 90 bp TGGTCTTCGTTCTTCTTGAGTTTCATGTGTTTTGCAAATTGTATCTaGGGTATTCTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: WSSFFLSFMCFANCI*GILSFWANIHLSVS
Trigger: ACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGAATACCCAAGATACAATTTGCAAAACACATGAAACTCAAGAAGAACGAAGACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 72 bp AGCCTTCTGGACTTCAGGGCTCGACCCACAGCAGGCTaGGTGTCCAGCTGCAGGTACTGCTCATCATGGTCC +
Preference number: 3 (lower is better)
Translates to: SLLDFRARPTAG*VSSCRYCSSWS
Trigger: GGACCATGATGAGCAGTACCTGCAGCTGGACACCCAGCCTGCTGTGGGTCGAGCCCTGAAGTCCAGAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 72 bp GGTCCATCACAGGCCAGTAGGGTAGACCCTCGCTGTTaGGGTTCCCATGTCGTGCGAAGTTGGCCCAGTACT +
Preference number: 3 (lower is better)
Translates to: GPSQASRVDPRC*GSHVVRSWPST
Trigger: AGTACTGGGCCAACTTCGCACGACATGGGAACCCCAACAGCGAGGGTCTACCCTACTGGCCTGTGATGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 72 bp TCTGGGACAGAGTCTTGGTCCAGAACTGCAGCCTTCTaGACTTCAGGGCTCGACCCACAGCAGGCTGGGTGT +
Preference number: 3 (lower is better)
Translates to: SGTESWSRTAAF*TSGLDPQQAGC
Trigger: ACACCCAGCCTGCTGTGGGTCGAGCCCTGAAGTCCAGAAGGCTGCAGTTCTGGACCAAGACTCTGTCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR TCA 72 bp TTCACTTTTGCCTCTCAGACAGCGCACCAGGGCCTCTaGGTCCATGGCCTCACATCCAGAGAGCTTGGCCAC +
Preference number: 3 (lower is better)
Translates to: FTFASQTAHQGL*VHGLTSRELGH
Trigger: GTGGCCAAGCTCTCTGGATGTGAGGCCATGGACTCAGAGGCCCTGGTGCGCTGTCTGAGAGGCAAAAGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR GCA 72 bp TCCTGGATCTTCTGGGACAGAGTCTTGGTCCAGAACTaGAGCCTTCTGGACTTCAGGGCTCGACCCACAGCA +
Preference number: 3 (lower is better)
Translates to: SWIFWDRVLVQN*SLLDFRARPTA
Trigger: TGCTGTGGGTCGAGCCCTGAAGTCCAGAAGGCTGCAGTTCTGGACCAAGACTCTGTCCCAGAAGATCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 72 bp CCCACCCTGCTCTCCATCCCACCCGCTCCTGCTTCCTaGCCCTGGTATACACTTGTATTGGGGCATATAATA +
Preference number: 3 (lower is better)
Translates to: PTLLSIPPAPAS*PWYTLVLGHII
Trigger: TATTATATGCCCCAATACAAGTGTATACCAGGGCCAGGAAGCAGGAGCGGGTGGGATGGAGAGCAGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CAA 90 bp ATCCTCAGATGCCAACAACTCTTTGGGATGCCTGGGGAAGAACTCTCCATCCACTCCAGGAATCCCCAGTaGCCTCTGGCATGCTGGTCT +
Preference number: 3 (lower is better)
Translates to: ILRCQQLFGMPGEELSIHSRNPQ*PLACWS
Trigger: AGACCAGCATGCCAGAGGCAACTGGGGATTCCTGGA...GTGGATGGAGAGTTCTTCCCCAGGCATCCCAAAGAGTTGTTGGCATCTGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR GCA 72 bp GGGGGACACAACATGGGAAGACACACTTGTGCCACCTaGAGACTCGCCAAAAATAGTGACCCGGTCAGGTTT +
Preference number: 3 (lower is better)
Translates to: GGHNMGRHTCAT*RLAKNSDPVRF
Trigger: AAACCTGACCGGGTCACTATTTTTGGCGAGTCTGCAGGTGGCACAAGTGTGTCTTCCCATGTTGTGTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR GCA 72 bp TGGCTGCCAATAGAGATCCATCGTACATGGAAGCCATaGCTGCAACCAGTCCACCTCCGTGAATCCATACCA +
Preference number: 3 (lower is better)
Translates to: WLPIEIHRTWKP*LQPVHLRESIP
Trigger: TGGTATGGATTCACGGAGGTGGACTGGTTGCAGGCATGGCTTCCATGTACGATGGATCTCTATTGGCAGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 72 bp AGTCCTCAATGGCTGCCAATAGAGATCCATCGTACATaGAAGCCATGCCTGCAACCAGTCCACCTCCGTGAA +
Preference number: 3 (lower is better)
Translates to: SPQWLPIEIHRT*KPCLQPVHLRE
Trigger: TTCACGGAGGTGGACTGGTTGCAGGCATGGCTTCCATGTACGATGGATCTCTATTGGCAGCCATTGAGGACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 72 bp GGACAGGGTGAAAATCCTCAGATGCCAACAACTCTTTaGGATGCCTGGGGAAGAACTCTCCATCCACCACAG +
Preference number: 3 (lower is better)
Translates to: GQGENPQMPTTL*DAWGRTLHPPQ
Trigger: CTGTGGTGGATGGAGAGTTCTTCCCCAGGCATCCCAAAGAGTTGTTGGCATCTGAGGATTTTCACCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR GCA 72 bp CATTACACCCAGATTTTGCAGACACATGGCTGGATGTaGAGTTCCATCTCTCACACCACTCCATGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: HYTQILQTHGWM*SSISHTTPWLR
Trigger: CCTGAGCCATGGAGTGGTGTGAGAGATGGAACTGCACATCCAGCCATGTGTCTGCAAAATCTGGGTGTAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 72 bp CTGCTCTCCATCCCACCCGCTCCTGCTTCCTGGCCCTaGTATACACTTGTATTGGGGCATATAATATTTGCA +
Preference number: 3 (lower is better)
Translates to: LLSIPPAPASWP*YTLVLGHIIFA
Trigger: TGCAAATATTATATGCCCCAATACAAGTGTATACCAGGGCCAGGAAGCAGGAGCGGGTGGGATGGAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 72 bp GAAAATCCTCAGATGCCAACAACTCTTTGGGATGCCTaGGGAAGAACTCTCCATCCACCACAGCAGGGATCA +
Preference number: 3 (lower is better)
Translates to: ENPQMPTTLWDA*GRTLHPPQQGS
Trigger: TGATCCCTGCTGTGGTGGATGGAGAGTTCTTCCCCAGGCATCCCAAAGAGTTGTTGGCATCTGAGGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR TCA 72 bp TCATCATCCTCCTGCTCAGCAGCTTCTCCCCCTCAGTaGAGTCAAGTTTCATGTCCCAGAAGAAGTACCCAA +
Preference number: 3 (lower is better)
Translates to: SSSSCSAASPPQ*SQVSCPRRSTQ
Trigger: TTGGGTACTTCTTCTGGGACATGAAACTTGACTTCACTGAGGGGGAGAAGCTGCTGAGCAGGAGGATGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR GCA 72 bp GATCATCTGGACAAGCTTGTTAATAGCCAGAATCTCTaGTTCACTTTTGCCTCTCAGACAGCGCACCAGGGC +
Preference number: 3 (lower is better)
Translates to: DHLDKLVNSQNL*FTFASQTAHQG
Trigger: GCCCTGGTGCGCTGTCTGAGAGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGCTTGTCCAGATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 72 bp CAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATaGAGGAGTGTCCCTTTTTCTCCACATGCTTGCCAG +
Preference number: 3 (lower is better)
Translates to: QSGCTSLQSHQQ*RSVPFSPHACQ
Trigger: CTGGCAAGCATGTGGAGAAAAAGGGACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CAA 90 bp TCTGACATCCTTGAGAGAGGCGATCTGATGTTGGAACTCATAAAAGTAGACAGAGTGACCCGGTCAGGTTaGCCTCCAAAGTGGGCAATG +
Preference number: 3 (lower is better)
Translates to: SDILERGDLMLELIKVDRVTRSG*PPKWAM
Trigger: CATTGCCCACTTTGGAGGCAAACCTGACCGGGTCAC...TCTGTCTACTTTTATGAGTTCCAACATCAGATCGCCTCTCTCAAGGATGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 72 bp TCTTCCATCATCTCTGTGAACTGTATTTGGAGGGTCTaGGCATCCTCAGTGTCCCCCATGTACTCTTCCATT +
Preference number: 3 (lower is better)
Translates to: SSIISVNCIWRV*ASSVSPMYSSI
Trigger: AATGGAAGAGTACATGGGGGACACTGAGGATGCCCAGACCCTCCAAATACAGTTCACAGAGATGATGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR CAA 90 bp GGTTGGTCTGACATCCTTGAGAGAGGCGATCTGATGTTGGAACTCATAAAAGTAATCTCTGCTTCACTTTaGCCTCTCAGACAGCGCACC +
Preference number: 3 (lower is better)
Translates to: GWSDILERGDLMLELIKVISASL*PLRQRT
Trigger: GGTGCGCTGTCTGAGAGGCAAAAGTGAAGCAGAGAT...TACTTTTATGAGTTCCAACATCAGATCGCCTCTCTCAAGGATGTCAGACCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR CAA 90 bp CCCAGACGATACTGGATAGTGACCACCACCAAGTCCTCAATGGCTGCCAATAGAGACTTTGTAACGCTATaGACTTTAAACCCCAAACAC +
Preference number: 3 (lower is better)
Translates to: PRRYWIVTTTKSSMAANRDFVTL*TLNPKH
Trigger: GTGTTTGGGGTTTAAAGTCAATAGCGTTACAAAGTC...TCTATTGGCAGCCATTGAGGACTTGGTGGTGGTCACTATCCAGTATCGTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR-3UTR CAA 90 bp GCTATTGACTTTAAACCCCAAACACATTTCCTTATAAAGGGTACTAAAGCTCCGCATGGGAAGACACACTaGTGCCACCTGCAGACTCGC +
Preference number: 3 (lower is better)
Translates to: AIDFKPQTHFLIKGTKAPHGKTH*CHLQTR
Trigger: GCGAGTCTGCAGGTGGCACAAGTGTGTCTTCCCATG...CGGAGCTTTAGTACCCTTTATAAGGAAATGTGTTTGGGGTTTAAAGTCAATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 72 bp TGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATaGGACAGTCTCTGCATGGTCTTTCCTTCCATCTCA +
Preference number: 3 (lower is better)
Translates to: CLWWLIMVWIPG*DSLCMVFPSIS
Trigger: TGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 72 bp TGTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTaGATGGGACAGTCTCTGCATGGTCTTTCCTTCCAT +
Preference number: 3 (lower is better)
Translates to: CLSLVVDYGMDP*MGQSLHGLSFH
Trigger: ATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CAA 90 bp CATATTGTTGTTCCTCCTATAGGGTTACAGACCCCTTCAGCTCCTTGGGTACTTGTATCCATTCCTCTGTaGAGGGATATCTGGGTTCTT +
Preference number: 3 (lower is better)
Translates to: HIVVPPIGLQTPSAPWVLVSIPL*RDIWVL
Trigger: AAGAACCCAGATATCCCTCAACAGAGGAATGGATAC...AAGTACCCAAGGAGCTGAAGGGGTCTGTAACCCTATAGGAGGAACAACAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR TCA 72 bp TTGCTGGCATATGCAATTGTGTCTGTCTTTGGTGGTTaGTTATGGTATGGATCCCTGGATGGGACAGTCTCT +
Preference number: 3 (lower is better)
Translates to: LLAYAIVSVFGG*LWYGSLDGTVS
Trigger: AGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR GCA 72 bp ACTTCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTaGAATCCCACCAACAATGGAGGAGTGTCCCTTTTT +
Preference number: 3 (lower is better)
Translates to: TSRLISRVVVQA*NPTNNGGVSLF
Trigger: AAAAAGGGACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 72 bp GGAGCATGTGTCCTTATTACCAGTTGGAACATCTTCTaGGTATATATGCCCAGGAGAGGTATTGCTGGATCT +
Preference number: 3 (lower is better)
Translates to: GACVLITSWNIF*VYMPRRGIAGS
Trigger: AGATCCAGCAATACCTCTCCTGGGCATATATACCCAGAAGATGTTCCAACTGGTAATAAGGACACATGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 72 bp TGCAATTGTGTCTGTCTTTGGTGGTTGATTATGGTATaGATCCCTGGATGGGACAGTCTCTGCATGGTCTTT +
Preference number: 3 (lower is better)
Translates to: CNCVCLWWLIMV*IPGWDSLCMVF
Trigger: AAAGACCATGCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CAA 90 bp TGTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGAAGCATCCATTTCATTaGAAGAAGGTTCTGGAGTTG +
Preference number: 3 (lower is better)
Translates to: CLSLVVDYGMDPWMGQSLKHPFH*KKVLEL
Trigger: CAACTCCAGAACCTTCTTCAAATGAAATGGATGCTT...CAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CAA 90 bp TTACCAGTTGGAACATCTTCTGGGTATATATGCCCAGGAGAGGTATTGCTGGATTTTTTCTCCACATGCTaGCCAGTATCTGCTGTCACA +
Preference number: 3 (lower is better)
Translates to: LPVGTSSGYICPGEVLLDFFSTC*PVSAVT
Trigger: TGTGACAGCAGATACTGGCAAGCATGTGGAGAAAAA...ATCCAGCAATACCTCTCCTGGGCATATATACCCAGAAGATGTTCCAACTGGTAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CAA 90 bp GAGACACAAACTCAGGGGGTACCTGTTAGTTCATATTGTTGTTCCTCCTATAGGTGCTGGCATATGCAATaGTGTCTGTCTTTGGTGGTT +
Preference number: 3 (lower is better)
Translates to: ETQTQGVPVSSYCCSSYRCWHMQ*CLSLVV
Trigger: AACCACCAAAGACAGACACAATTGCATATGCCAGCA...CCTATAGGAGGAACAACAATATGAACTAACAGGTACCCCCTGAGTTTGTGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR GCA 72 bp TTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTaGATGGTCTTTCCTTCCATCTCATCTCCTAACTTT +
Preference number: 3 (lower is better)
Translates to: LIMVWIPGWDSL*MVFPSISSPNF
Trigger: AAAGTTAGGAGATGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 72 bp GCATGGCTTGCTGAAATTTTGATGCAGTCAATCTCTTaGGGCCAACAGTCCCTTAAGCATCCATTTCATTTG +
Preference number: 3 (lower is better)
Translates to: AWLAEILMQSIS*GQQSLKHPFHL
Trigger: CAAATGAAATGGATGCTTAAGGGACTGTTGGCCCCAAGAGATTGACTGCATCAAAATTTCAGCAAGCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 72 bp CAAAATCTTGCTGGCATATGCAATTGTGTCTGTCTTTaGTGGTTGATTATGGTATGGATCCCTGGATGGGAC +
Preference number: 3 (lower is better)
Translates to: QNLAGICNCVCL*WLIMVWIPGWD
Trigger: GTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGCAAGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CAA 90 bp TGTATTTGCCAGGCACTGGCATACCCTCACAAGAGTCAGCTATATCAAGGTTCTGACTTTGTAACGCTATaGACTTTAAACCCCAAACAC +
Preference number: 3 (lower is better)
Translates to: CICQALAYPHKSQLYQGSDFVTL*TLNPKH
Trigger: GTGTTTGGGGTTTAAAGTCAATAGCGTTACAAAGTC...AGAACCTTGATATAGCTGACTCTTGTGAGGGTATGCCAGTGCCTGGCAAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CAA 90 bp CATATTGTTGTTCCTCCTATAGGGTTACAGACCCCTTCAGCTCCTTGGGTACTTTGGTCTTCGTTCTTCTaGAGTTTCATGTGTTTTGCA +
Preference number: 3 (lower is better)
Translates to: HIVVPPIGLQTPSAPWVLWSSFF*SFMCFA
Trigger: TGCAAAACACATGAAACTCAAGAAGAACGAAGACCA...AAGTACCCAAGGAGCTGAAGGGGTCTGTAACCCTATAGGAGGAACAACAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR GCA 72 bp TCCTTATTACCAGTTGGAACATCTTCTGGGTATATATaGCCAGGAGAGGTATTGCTGGATCTTCTGGTAGTA +
Preference number: 3 (lower is better)
Translates to: SLLPVGTSSGYI*PGEVLLDLLVV
Trigger: TACTACCAGAAGATCCAGCAATACCTCTCCTGGGCATATATACCCAGAAGATGTTCCAACTGGTAATAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR GCA 72 bp AGCTTCAATTTTATCTCCTTCATTACACCCAGATTTTaGAGACACATGGCTGGATGTGCAGTTCCATCTCTC +
Preference number: 3 (lower is better)
Translates to: SFNFISFITPRF*RHMAGCAVPSL
Trigger: GAGAGATGGAACTGCACATCCAGCCATGTGTCTGCAAAATCTGGGTGTAATGAAGGAGATAAAATTGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CCA 72 bp TATGAACATAGTGGAGCATGTGTCCTTATTACCAGTTaGAACATCTTCTGGGTATATATGCCCAGGAGAGGT +
Preference number: 3 (lower is better)
Translates to: YEHSGACVLITS*NIFWVYMPRRG
Trigger: ACCTCTCCTGGGCATATATACCCAGAAGATGTTCCAACTGGTAATAAGGACACATGCTCCACTATGTTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR TCA 72 bp GTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTaGGGGATATCTGGGTTCTTTCCAGCTTCTGGCTAT +
Preference number: 3 (lower is better)
Translates to: VNVPHFLYPFLC*GISGFFPASGY
Trigger: ATAGCCAGAAGCTGGAAAGAACCCAGATATCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR TCA 72 bp CTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGATaGTACCCTCCATATCTATCCATTTGCCTAGGAATT +
Preference number: 3 (lower is better)
Translates to: LSSFVIGLPHSG*YPPYLSICLGI
Trigger: AATTCCTAGGCAAATGGATAGATATGGAGGGTATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CCA 72 bp ATCAGTGAGTGCATATCATCTGAGTTCTTTTGTGATTaGGTTACCTCACTCAGGATGATACCCTCCATATCT +
Preference number: 3 (lower is better)
Translates to: ISECISSEFFCD*VTSLRMIPSIS
Trigger: AGATATGGAGGGTATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCAGATGATATGCACTCACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR-3UTR CAA 90 bp TTCTTTTGTGATTGGGTTACCTCACTCAGGATGATACCCTCCATATCTATCCATCAGGGTTGTTTTGATTaGCATGGCTTGCTGAAATTT +
Preference number: 3 (lower is better)
Translates to: FFCDWVTSLRMIPSISIHQGCFD*HGLLKF
Trigger: AAATTTCAGCAAGCCATGCAAATCAAAACAACCCTG...ATGGATAGATATGGAGGGTATCATCCTGAGTGAGGTAACCCAATCACAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR GCA 72 bp AGAGTCAGCTATATCAAGGTTCTTTCAGCAAAATCTTaGTGGCATATGCAATTGTGTCTGTCTTTGGTGGTT +
Preference number: 3 (lower is better)
Translates to: RVSYIKVLSAKS*WHMQLCLSLVV
Trigger: AACCACCAAAGACAGACACAATTGCATATGCCAGCAAGATTTTGCTGAAAGAACCTTGATATAGCTGACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR TCA 72 bp ATAGAGAGTGTTTTTCACACAGGAAAGCTCAAAGACTaGGGTGACAAATGCTATGTAAGTGTTGGAACAAAC +
Preference number: 3 (lower is better)
Translates to: IESVFHTGKLKD*GDKCYVSVGTN
Trigger: GTTTGTTCCAACACTTACATAGCATTTGTCACCTCAGTCTTTGAGCTTTCCTGTGTGAAAAACACTCTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059449.7
ENSMUST00000163042.2
3UTR TCA 72 bp GAGTGTTTTTCACACAGGAAAGCTCAAAGACTGAGGTaGCAAATGCTATGTAAGTGTTGGAACAAACAAAAA +
Preference number: 3 (lower is better)
Translates to: ECFSHRKAQRLR*QMLCKCWNKQK
Trigger: TTTTTGTTTGTTCCAACACTTACATAGCATTTGTCACCTCAGTCTTTGAGCTTTCCTGTGTGAAAAACACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059449.7
ENSMUST00000163042.2
3UTR TCA 72 bp TTTTTCTCCACATGCTTGCCAGTATCTGCTGTCACATaGATTTTTGATAATATCCATTATGACTGGTGTGAG +
Preference number: 3 (lower is better)
Translates to: FFSTCLPVSAVT*IFDNIHYDWCE
Trigger: CTCACACCAGTCATAATGGATATTATCAAAAATTCATGTGACAGCAGATACTGGCAAGCATGTGGAGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp AGGGCCTCTGAGTCCATGGCCTCACATCCAGAGAGCTaGGCCACCGTAGTGGAGACCATCTCAGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RASESMASHPES*ATVVETISEVS
Trigger: TGACACCTCTGAGATGGTCTCCACTACGGTGGCCAAGCTCTCTGGATGTGAGGCCATGGACTCAGAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
CDS-3UTR TCA 90 bp CTGGATGGGACAGTCTCTGCATGGTCTTTCCTTCCATCTCATCTCCTAACTTTGGGGGCTGGCCTCTGGTaGGTCCTGACCCTGCACATG +
Preference number: 4 (lower is better)
Translates to: LDGTVSAWSFLPSHLLTLGAGLW*VLTLHM
Trigger: CATGTGCAGGGTCAGGACTCACCAGAGGCCAGCCCC...CAAAGTTAGGAGATGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR TCA 90 bp TCCTGCTTCCTGGCCCTGGTATACACTTGTATTGGGGCATATAATATTTGCAAGGCCTCTGGTGAGTCCTaGCCCTGCACATGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SCFLALVYTCIGAYNICKASGES*PCTWPR
Trigger: CCTCGGCCATGTGCAGGGTCAGGACTCACCAGAGGC...CTTGCAAATATTATATGCCCCAATACAAGTGTATACCAGGGCCAGGAAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR TCA 90 bp AAAAAGCCCAGGACACCCAGACGATACTGGATAGTGACCACCACCAAGTCCTCACTGTATGTGTGTTTCTaGTGGGGCTGGCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: KKPRTPRRYWIVTTTKSSLYVCF*WGWPLV
Trigger: CACCAGAGGCCAGCCCCATCAGAAACACACATACAG...TGAGGACTTGGTGGTGGTCACTATCCAGTATCGTCTGGGTGTCCTGGGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
CDS-3UTR TCA 90 bp ATCTGGACAAGCTTGTTAATAGCCAGAATCTCTGCTTCACTTTTGCCTCTCAGAGGGGCTGGCCTCTGGTaGGTCCCTGCACATGGCCGA +
Preference number: 4 (lower is better)
Translates to: IWTSLLIARISASLLPLRGAGLW*VPAHGR
Trigger: TCGGCCATGTGCAGGGACTCACCAGAGGCCAGCCCC...TCTGAGAGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGCTTGTCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CAA 72 bp TGTTCCTCCTATAGGGTTACAGACCCCTTCAGCTCCTaGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: CSSYRVTDPFSS*GTFSSSSIGGH
Trigger: ATGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGGTCTGTAACCCTATAGGAGGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR TCA 90 bp TCCATTGGGGGCCATGTGTTCCATCCAATAGATGACTCTGAGCATTCACTTCTGACCAGTCCACCTCCGTaGATCCATACCATCACAGGC +
Preference number: 4 (lower is better)
Translates to: SIGGHVFHPIDDSEHSLLTSPPP*IHTITG
Trigger: GCCTGTGATGGTATGGATTCACGGAGGTGGACTGGT...CAGAAGTGAATGCTCAGAGTCATCTATTGGATGGAACACATGGCCCCCAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR TCA 90 bp TGTATTTGCCAGGCACTGGCATACCCTCACAAGAGTCAGCTATATCAAGGTTCTCCACCCCACTCTCCATaGTGGCTCCATGGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: CICQALAYPHKSQLYQGSPPHSP*WLHGRV
Trigger: GACTCTTCCATGGAGCCATCATGGAGAGTGGGGTGG...AGAACCTTGATATAGCTGACTCTTGTGAGGGTATGCCAGTGCCTGGCAAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp CTGGATGGGACAGTCTCTGCATGGTCTTTCCTTCCATCTCATCTCCTAACTTTGCGTACATGGAAGCCATaGCTGCAACCAGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LDGTVSAWSFLPSHLLTLRTWKP*LQPVHL
Trigger: GAGGTGGACTGGTTGCAGGCATGGCTTCCATGTACG...CAAAGTTAGGAGATGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp GTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGCACTTCATCATCCTCCTaGTCAGCAGCTTCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: VCLWWLIMVWIPGWDSLCTSSSS*SAASPP
Trigger: AGGGGGAGAAGCTGCTGAGCAGGAGGATGATGAAGT...GCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp TGTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGTGTATTTGGAGGGTCTaGGCATCCTCAGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CLSLVVDYGMDPWMGQSLCIWRV*ASSVSP
Trigger: GGGGGACACTGAGGATGCCCAGACCCTCCAAATACA...CAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp GGAACTTCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAGAACTGCAGCCTTCTaGACTTCAGGGCTCGACCCA +
Preference number: 4 (lower is better)
Translates to: GTSRLISRVVVQACNPTNRTAAF*TSGLDP
Trigger: TGGGTCGAGCCCTGAAGTCCAGAAGGCTGCAGTTCT...GTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGAAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp CCCGCTCCTGCTTCCTGGCCCTGGTATACACTTGTATaGGGGCATATAATATTTGCAAGACCAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PAPASWPWYTLV*GHIIFARPRAS
Trigger: AGAGGCCCTTGGTCTTGCAAATATTATATGCCCCAATACAAGTGTATACCAGGGCCAGGAAGCAGGAGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR TCA 90 bp TCCTGCTTCCTGGCCCTGGTATACACTTGTATTGGGGCATATAATATTTGCAAGCGTAGGGCAGCCACTTaGTCCAGGAATCCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SCFLALVYTCIGAYNICKRRAAT*SRNPQL
Trigger: CAACTGGGGATTCCTGGATCAAGTGGCTGCCCTACG...CTTGCAAATATTATATGCCCCAATACAAGTGTATACCAGGGCCAGGAAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp TTACCAGTTGGAACATCTTCTGGGTATATATGCCCAGGAGAGGTATTGCTGGATCATGGAAGCCATGCCTaGAACCAGTCCACCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LPVGTSSGYICPGEVLLDHGSHA*NQSTSV
Trigger: CACGGAGGTGGACTGGTTGCAGGCATGGCTTCCATG...ATCCAGCAATACCTCTCCTGGGCATATATACCCAGAAGATGTTCCAACTGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp GTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGCACACCCAGACGATACTaGATAGTGACCACCACCAAG +
Preference number: 4 (lower is better)
Translates to: VCLWWLIMVWIPGWDSLCTPRRY*IVTTTK
Trigger: CTTGGTGGTGGTCACTATCCAGTATCGTCTGGGTGT...GCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp GGAACTTCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACGAAGCCCTTAGCTCCTaGATCTTCTGGGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: GTSRLISRVVVQACNPTNEALSS*IFWDRV
Trigger: GACTCTGTCCCAGAAGATCCAGGAGCTAAGGGCTTC...GTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGAAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp GGTCACTACACTCAGGAGGCAGCATCAGTTGTGCTGTaGTATTCTTCAAAACAGCCTGCAGGTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GHYTQEAASVVL*YSSKQPAGSLW
Trigger: CCAGAGAGAACCTGCAGGCTGTTTTGAAGAATACAACAGCACAACTGATGCTGCCTCCTGAGTGTAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
CDS-3UTR TCA 90 bp TCCTGCTTCCTGGCCCTGGTATACACTTGTATTGGGGCATATAATATTTGCAAGCTGTATGTGTGTTTCTaGTGGGGCTGGCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SCFLALVYTCIGAYNICKLYVCF*WGWPLV
Trigger: CACCAGAGGCCAGCCCCATCAGAAACACACATACAG...CTTGCAAATATTATATGCCCCAATACAAGTGTATACCAGGGCCAGGAAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp TCCCCCTCAGTGAAGTCAAGTTTCATGTCCCAGAAGAAGTACCCAAAGACAAAATCACGTGGACAAGGCTaGCTCGGACCTGTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: SPSVKSSFMSQKKYPKTKSRGQG*LGPVLY
Trigger: ATACAGGACAGGTCCGAGGCAGCCTTGTCCACGTGA...TTTTGTCTTTGGGTACTTCTTCTGGGACATGAAACTTGACTTCACTGAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
CDS-3UTR GCA 90 bp ACAATGGAGGAGTGTCCCTTTTTCTCCACATGCTTGCCAGTATCTGCTGTCACAACACATGGCTGGATGTaGAGTTCCATCTCTCACACC +
Preference number: 4 (lower is better)
Translates to: TMEECPFFSTCLPVSAVTTHGWM*SSISHT
Trigger: GGTGTGAGAGATGGAACTGCACATCCAGCCATGTGT...TGTGACAGCAGATACTGGCAAGCATGTGGAGAAAAAGGGACACTCCTCCATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp TATGGATCCCTGGATGGGACAGTCTCTGCATGGTCTTTCCTTCCATCTCATCTCCACACTTGTGCCACCTaGAGACTCGCCAAAAATAGT +
Preference number: 4 (lower is better)
Translates to: YGSLDGTVSAWSFLPSHLHTCAT*RLAKNS
Trigger: ACTATTTTTGGCGAGTCTGCAGGTGGCACAAGTGTG...GAGATGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAGGGATCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp GTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGCAACAACTCTTTGGGATaGCTGGGGAAGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: VCLWWLIMVWIPGWDSLCNNSLG*LGKNSP
Trigger: TGGAGAGTTCTTCCCCAGGCATCCCAAAGAGTTGTT...GCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp TGTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGGGTTTGCCTCCAAAGTaGGCAATGTTCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: CLSLVVDYGMDPWMGQSLGLPPK*AMFCWI
Trigger: GATCCAGCAGAACATTGCCCACTTTGGAGGCAAACC...CAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp TCCATTGGGGGCCATGTGTTCCATCCAATAGATGACTCTGAGCATTCACTTCTGACTCTTTGGGATGCCTaGGGAAGAACTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: SIGGHVFHPIDDSEHSLLTLWDA*GRTLHP
Trigger: TGGATGGAGAGTTCTTCCCCAGGCATCCCAAAGAGT...CAGAAGTGAATGCTCAGAGTCATCTATTGGATGGAACACATGGCCCCCAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp AGCCTGCAGGTTCTCTCTGGTTATTTCCTTTATTGTTaGAGCAGAGCCCATGACCACAGGAATGGTCCAACC +
Preference number: 4 (lower is better)
Translates to: SLQVLSGYFLYC*SRAHDHRNGPT
Trigger: GGTTGGACCATTCCTGTGGTCATGGGCTCTGCTCAAACAATAAAGGAAATAACCAGAGAGAACCTGCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
CDS-3UTR TCA 90 bp TATGGATCCCTGGATGGGACAGTCTCTGCATGGTCTTTCCTTCCATCTCATCTCCAGGGATCACAAACATaGAGTCTTCCATCATCTCTG +
Preference number: 4 (lower is better)
Translates to: YGSLDGTVSAWSFLPSHLQGSQT*SLPSSL
Trigger: CAGAGATGATGGAAGACTTCATGTTTGTGATCCCTG...GAGATGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAGGGATCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp TGTATTTGCCAGGCACTGGCATACCCTCACAAGAGTCAGCTATATCAAGGTTCTAGAGTCCTTTGGACATaGGGGACACAACATGGGAAG +
Preference number: 4 (lower is better)
Translates to: CICQALAYPHKSQLYQGSRVLWT*GTQHGK
Trigger: CTTCCCATGTTGTGTCCCCCATGTCCAAAGGACTCT...AGAACCTTGATATAGCTGACTCTTGTGAGGGTATGCCAGTGCCTGGCAAATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp CTGGATGGGACAGTCTCTGCATGGTCTTTCCTTCCATCTCATCTCCTAACTTTGATGCCAACAACTCTTTaGGATGCCTGGGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: LDGTVSAWSFLPSHLLTLMPTTL*DAWGRT
Trigger: AGTTCTTCCCCAGGCATCCCAAAGAGTTGTTGGCAT...CAAAGTTAGGAGATGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR TCA 90 bp GTTACCTCACTCAGGATGATACCCTCCATATCTATCCATTTGCCTAGGAATTTCTTTGAGCAGAGCCCATaGCCACAGGAATGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: VTSLRMIPSISIHLPRNFFEQSP*PQEWSN
Trigger: GTTGGACCATTCCTGTGGTCATGGGCTCTGCTCAAA...GAAATTCCTAGGCAAATGGATAGATATGGAGGGTATCATCCTGAGTGAGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp TTCTTTTGTGATTGGGTTACCTCACTCAGGATGATACCCTCCATATCTATCCATTCACGTGGACAAGGCTaGCTCGGACCTGTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: FFCDWVTSLRMIPSISIHSRGQG*LGPVLY
Trigger: ATACAGGACAGGTCCGAGGCAGCCTTGTCCACGTGA...ATGGATAGATATGGAGGGTATCATCCTGAGTGAGGTAACCCAATCACAAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp TTTTCTGTATCCATTCCTCTGTTGAGGGATATCTGGGTTCTTTCCAGCTTCTGGTCTCTGCTTCACTTTTaGCTCTCAGACAGCGCACCA +
Preference number: 4 (lower is better)
Translates to: FSVSIPLLRDIWVLSSFWSLLHF*LSDSAP
Trigger: TGGTGCGCTGTCTGAGAGGCAAAAGTGAAGCAGAGA...CCAGAAGCTGGAAAGAACCCAGATATCCCTCAACAGAGGAATGGATACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp TCCATTGGGGGCCATGTGTTCCATCCAATAGATGACTCTGAGCATTCACTTCTGGATTTTGCAGACACATaGCTGGATGTGCAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SIGGHVFHPIDDSEHSLLDFADT*LDVQFH
Trigger: ATGGAACTGCACATCCAGCCATGTGTCTGCAAAATC...CAGAAGTGAATGCTCAGAGTCATCTATTGGATGGAACACATGGCCCCCAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp CTGGATGGGACAGTCTCTGCATGGTCTTTCCTTCCATCTCATCTCCTAACTTTGGGACGTAGAGACAGGTaGCAGCTTCAATTTTATCTC +
Preference number: 4 (lower is better)
Translates to: LDGTVSAWSFLPSHLLTLGRRDR*QLQFYL
Trigger: GAGATAAAATTGAAGCTGCCACCTGTCTCTACGTCC...CAAAGTTAGGAGATGAGATGGAAGGAAAGACCATGCAGAGACTGTCCCATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp GTTACCTCACTCAGGATGATACCCTCCATATCTATCCATTTGCCTAGGAATTTCAGCTCCTGGATCTTCTaGGACAGAGTCTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: VTSLRMIPSISIHLPRNFSSWIF*DRVLVQ
Trigger: CTGGACCAAGACTCTGTCCCAGAAGATCCAGGAGCT...GAAATTCCTAGGCAAATGGATAGATATGGAGGGTATCATCCTGAGTGAGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp CTTGCTGGCATATGCAATTGTGTCTGTCTTTGGTGGTaGATTATGGTATGGATCCCTGGATGGGACAGTCTC +
Preference number: 4 (lower is better)
Translates to: LAGICNCVCLWW*IMVWIPGWDSL
Trigger: GAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp TCTCCATCCACCACAGCAGGGATCATCTGGACAAGCTaGTTAATAGCCAGAATCTCTGCTTCACTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SPSTTAGIIWTS*LIARISASLLP
Trigger: AGGCAAAAGTGAAGCAGAGATTCTGGCTATTAACAAGCTTGTCCAGATGATCCCTGCTGTGGTGGATGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
CDS-3UTR GCA 90 bp GTTACCTCACTCAGGATGATACCCTCCATATCTATCCATTTGCCTAGGAATTTCCAGTTGCCTCTGGCATaGTGGTCTCCAGTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: VTSLRMIPSISIHLPRNFQLPLA*WSPVLK
Trigger: TTTTAGCACTGGAGACCAGCATGCCAGAGGCAACTG...GAAATTCCTAGGCAAATGGATAGATATGGAGGGTATCATCCTGAGTGAGGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp GGAACTTCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACGGAACGCTGAAAATATaGTACTTGAAGTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GTSRLISRVVVQACNPTNGTLKI*YLKCRD
Trigger: ATCCCTGCACTTCAAGTAGCATATTTTCAGCGTTCC...GTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGAAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp TTACCAGTTGGAACATCTTCTGGGTATATATGCCCAGGAGAGGTATTGCTGGATTCCATGATGGCTCCATaGAAGAGTCCTTTGGACATG +
Preference number: 4 (lower is better)
Translates to: LPVGTSSGYICPGEVLLDSMMAP*KSPLDM
Trigger: CATGTCCAAAGGACTCTTCCATGGAGCCATCATGGA...ATCCAGCAATACCTCTCCTGGGCATATATACCCAGAAGATGTTCCAACTGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp TCTTGGGGCCAACAGTCCCTTAAGCATCCATTTCATTaGAAGAAGGTTCTGGAGTTGGAGAAAAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SWGQQSLKHPFH*KKVLELEKRRG
Trigger: TCCTCTCCTTTTCTCCAACTCCAGAACCTTCTTCAAATGAAATGGATGCTTAAGGGACTGTTGGCCCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp AACTTCCAGACTGATTTCCAGAGTGGTTGTACAAGCTaGCAATCCCACCAACAATGGAGGAGTGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: NFQTDFQSGCTS*QSHQQWRSVPF
Trigger: AAAAGGGACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR TCA 90 bp TTTTCTGTATCCATTCCTCTGTTGAGGGATATCTGGGTTCTTTCCAGCTTCTGGCTTCCATCATCTCTGTaGACTGTATTTGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: FSVSIPLLRDIWVLSSFWLPSSL*TVFGGS
Trigger: AGACCCTCCAAATACAGTTCACAGAGATGATGGAAG...CCAGAAGCTGGAAAGAACCCAGATATCCCTCAACAGAGGAATGGATACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp CAGCTAGAGACACAAACTCAGGGGGTACCTGTTAGTTCATATTGTTGTTCCTCCAATAGCCAGAATCTCTaGTTCACTTTTGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: QLETQTQGVPVSSYCCSSNSQNL*FTFASQ
Trigger: CTGAGAGGCAAAAGTGAAGCAGAGATTCTGGCTATT...GGAGGAACAACAATATGAACTAACAGGTACCCCCTGAGTTTGTGTCTCTAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp AATGGAGGAGTGTCCCTTTTTCTCCACATGCTTGCCAGTATCTGCTGTCACATGTTCTTCAAAACAGCCTaGAGGTTCTCTCTGGTTATT +
Preference number: 4 (lower is better)
Translates to: NGGVSLFLHMLASICCHMFFKTA*RFSLVI
Trigger: AATAACCAGAGAGAACCTGCAGGCTGTTTTGAAGAA...CATGTGACAGCAGATACTGGCAAGCATGTGGAGAAAAAGGGACACTCCTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp GCAAAATCTTGCTGGCATATGCAATTGTGTCTGTCTTaGGTGGTTGATTATGGTATGGATCCCTGGATGGGA +
Preference number: 4 (lower is better)
Translates to: AKSCWHMQLCLS*VVDYGMDPWMG
Trigger: TCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGCAAGATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp TGGTCTTCGTTCTTCTTGAGTTTCATGTGTTTTGCAAATTGTATCTTGGGTATTGGGAAGACACACTTGTaGCACCTGCAGACTCGCCAA +
Preference number: 4 (lower is better)
Translates to: WSSFFLSFMCFANCILGIGKTHL*HLQTRQ
Trigger: TTGGCGAGTCTGCAGGTGGCACAAGTGTGTCTTCCC...AATACCCAAGATACAATTTGCAAAACACATGAAACTCAAGAAGAACGAAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR GCA 90 bp TCCATTGGGGGCCATGTGTTCCATCCAATAGATGACTCTGAGCATTCACTTCTGATATGCTACTTGAAGTaGAGGGATCACAAACATGAA +
Preference number: 4 (lower is better)
Translates to: SIGGHVFHPIDDSEHSLLICYLK*RDHKHE
Trigger: TTCATGTTTGTGATCCCTGCACTTCAAGTAGCATAT...CAGAAGTGAATGCTCAGAGTCATCTATTGGATGGAACACATGGCCCCCAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp TTCTTTTGTGATTGGGTTACCTCACTCAGGATGATACCCTCCATATCTATCCATTTGCAGACACATGGCTaGATGTGCAGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: FFCDWVTSLRMIPSISIHLQTHG*MCSSIS
Trigger: AGAGATGGAACTGCACATCCAGCCATGTGTCTGCAA...ATGGATAGATATGGAGGGTATCATCCTGAGTGAGGTAACCCAATCACAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp TTCTTTTGTGATTGGGTTACCTCACTCAGGATGATACCCTCCATATCTATCCATCATGGAAGAGTCCTTTaGACATGGGGGACACAACAT +
Preference number: 4 (lower is better)
Translates to: FFCDWVTSLRMIPSISIHHGRVL*TWGTQH
Trigger: ATGTTGTGTCCCCCATGTCCAAAGGACTCTTCCATG...ATGGATAGATATGGAGGGTATCATCCTGAGTGAGGTAACCCAATCACAAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp AGAGTCAGCTATATCAAGGTTCTTTCAGCAAAATCTTGCTGGCATATGCAATTGCATGTCGTGCGAAGTTaGCCCAGTACTTCATCATCC +
Preference number: 4 (lower is better)
Translates to: RVSYIKVLSAKSCWHMQLHVVRS*PSTSSS
Trigger: GGATGATGAAGTACTGGGCCAACTTCGCACGACATG...CAATTGCATATGCCAGCAAGATTTTGCTGAAAGAACCTTGATATAGCTGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp GGAACATCTTCTGGGTATATATGCCCAGGAGAGGTATaGCTGGATCTTCTGGTAGTACTATGTCCAATTTTC +
Preference number: 4 (lower is better)
Translates to: GTSSGYICPGEV*LDLLVVLCPIF
Trigger: GAAAATTGGACATAGTACTACCAGAAGATCCAGCAATACCTCTCCTGGGCATATATACCCAGAAGATGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp CAGCTTCAATTTTATCTCCTTCATTACACCCAGATTTaGCAGACACATGGCTGGATGTGCAGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: QLQFYLLHYTQI*QTHGWMCSSIS
Trigger: AGAGATGGAACTGCACATCCAGCCATGTGTCTGCAAAATCTGGGTGTAATGAAGGAGATAAAATTGAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
3UTR CAA 72 bp GTAGACAGAAGCATGGGAACGCTGAAAATATGCTACTaGAAGTGCAGGGATCACAAACATGAAGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: VDRSMGTLKICY*KCRDHKHEVFH
Trigger: ATGGAAGACTTCATGTTTGTGATCCCTGCACTTCAAGTAGCATATTTTCAGCGTTCCCATGCTTCTGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
CDS-3UTR CCA 90 bp CTTAAGCATCCATTTCATTTGAAGAAGGTTCTGGAGTTGGAGAAAAGGAGAGGAACAGCAGGGATCATCTaGACAAGCTTGTTAATAGCC +
Preference number: 4 (lower is better)
Translates to: LKHPFHLKKVLELEKRRGTAGII*TSLLIA
Trigger: GGCTATTAACAAGCTTGTCCAGATGATCCCTGCTGT...TCCTCTCCTTTTCTCCAACTCCAGAACCTTCTTCAAATGAAATGGATGCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp TGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTaGAGGGATATCTGGGTTCTTTCCAGCTTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: CKCTTFSVSIPL*RDIWVLSSFWL
Trigger: TAGCCAGAAGCTGGAAAGAACCCAGATATCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR TCA 90 bp CTTAAGCATCCATTTCATTTGAAGAAGGTTCTGGAGTTGGAGAAAAGGAGAGGAATTTCCTTTATTGTTTaGGCAGAGCCCATGACCACA +
Preference number: 4 (lower is better)
Translates to: LKHPFHLKKVLELEKRRGISFIV*AEPMTT
Trigger: TGTGGTCATGGGCTCTGCTCAAACAATAAAGGAAAT...TCCTCTCCTTTTCTCCAACTCCAGAACCTTCTTCAAATGAAATGGATGCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CCA 90 bp TCCTGCTTCCTGGCCCTGGTATACACTTGTATTGGGGCATATAATATTTGCAAGCCTGCAGGTTCTCTCTaGTTATTTCCTTTATTGTTT +
Preference number: 4 (lower is better)
Translates to: SCFLALVYTCIGAYNICKPAGSL*LFPLLF
Trigger: AAACAATAAAGGAAATAACCAGAGAGAACCTGCAGG...CTTGCAAATATTATATGCCCCAATACAAGTGTATACCAGGGCCAGGAAGCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp AAGAGTCAGCTATATCAAGGTTCTTTCAGCAAAATCTaGCTGGCATATGCAATTGTGTCTGTCTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KSQLYQGSFSKI*LAYAIVSVFGG
Trigger: ACCACCAAAGACAGACACAATTGCATATGCCAGCAAGATTTTGCTGAAAGAACCTTGATATAGCTGACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp AAGGTTCTTTCAGCAAAATCTTGCTGGCATATGCAATaGTGTCTGTCTTTGGTGGTTGATTATGGTATGGAT +
Preference number: 4 (lower is better)
Translates to: KVLSAKSCWHMQ*CLSLVVDYGMD
Trigger: ATCCATACCATAATCAACCACCAAAGACAGACACAATTGCATATGCCAGCAAGATTTTGCTGAAAGAACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
3UTR CAA 72 bp ACCTCACTCAGGATGATACCCTCCATATCTATCCATTaGCCTAGGAATTTCATAAATCCATTGTTTTTAATA +
Preference number: 4 (lower is better)
Translates to: TSLRMIPSISIH*PRNFINPLFLI
Trigger: TATTAAAAACAATGGATTTATGAAATTCCTAGGCAAATGGATAGATATGGAGGGTATCATCCTGAGTGAGGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS TCA 90 bp TCACGTGGACAAGGCTGCCTCGGACCTGTCCTGTATGTGTGTTTCTaGTGGGGCTGGCCTCTGGTGAGTCCCTGCACATGGCCGAGGAGA +
Preference number: 5 (lower is better)
Translates to: SRGQGCLGPVLYVCF*WGWPLVSPCTWPRR
Trigger: TCTCCTCGGCCATGTGCAGGGACTCACCAGAGGCCAGCCCCATCAGAAACACACATACAGGACAGGTCCGAGGCAGCCTTGTCCACGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2
CDS-3UTR CAA 90 bp GTCTGTCTTTGGTGGTTGATTATGGTATGGATCCCTGGATGGGACAGTCTCTGCCATGGGAAGACACACTaGTGCCACCTGCAGACTCGC +
Preference number: 5 (lower is better)
Translates to: VCLWWLIMVWIPGWDSLCHGKTH*CHLQTR
Trigger: GCGAGTCTGCAGGTGGCACAAGTGTGTCTTCCCATG...GCAGAGACTGTCCCATCCAGGGATCCATACCATAATCAACCACCAAAGACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CAA 90 bp AATGGAGGAGTGTCCCTTTTTCTCCACATGCTTGCCAGTATCTGCTGTCACATGTCCAGGAATCCCCAGTaGCCTCTGGCATGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: NGGVSLFLHMLASICCHMSRNPQ*PLACWS
Trigger: AGACCAGCATGCCAGAGGCAACTGGGGATTCCTGGA...CATGTGACAGCAGATACTGGCAAGCATGTGGAGAAAAAGGGACACTCCTCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CAA 90 bp TCCATTGGGGGCCATGTGTTCCATCCAATAGATGACTCTGAGCATTCACTTCTGCCATGGAAGAGTCCTTaGGACATGGGGGACACAACA +
Preference number: 5 (lower is better)
Translates to: SIGGHVFHPIDDSEHSLLPWKSP*DMGDTT
Trigger: TGTTGTGTCCCCCATGTCCAAAGGACTCTTCCATGG...CAGAAGTGAATGCTCAGAGTCATCTATTGGATGGAACACATGGCCCCCAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CAA 90 bp AATGGAGGAGTGTCCCTTTTTCTCCACATGCTTGCCAGTATCTGCTGTCACATGCATTACACCCAGATTTaGCAGACACATGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: NGGVSLFLHMLASICCHMHYTQI*QTHGWM
Trigger: CATCCAGCCATGTGTCTGCAAAATCTGGGTGTAATG...CATGTGACAGCAGATACTGGCAAGCATGTGGAGAAAAAGGGACACTCCTCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CAA 90 bp AGAGTCAGCTATATCAAGGTTCTTTCAGCAAAATCTTGCTGGCATATGCAATTGGTGACCCGGTCAGGTTaGCCTCCAAAGTGGGCAATG +
Preference number: 5 (lower is better)
Translates to: RVSYIKVLSAKSCWHMQLVTRSG*PPKWAM
Trigger: CATTGCCCACTTTGGAGGCAAACCTGACCGGGTCAC...CAATTGCATATGCCAGCAAGATTTTGCTGAAAGAACCTTGATATAGCTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CAA 90 bp AGAGTCAGCTATATCAAGGTTCTTTCAGCAAAATCTTGCTGGCATATGCAATTGATCTCTGCTTCACTTTaGCCTCTCAGACAGCGCACC +
Preference number: 5 (lower is better)
Translates to: RVSYIKVLSAKSCWHMQLISASL*PLRQRT
Trigger: GGTGCGCTGTCTGAGAGGCAAAAGTGAAGCAGAGAT...CAATTGCATATGCCAGCAAGATTTTGCTGAAAGAACCTTGATATAGCTGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CAA 90 bp TTATCAGTGAGTGCATATCATCTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGATGCCAACAACTCTTaGGGATGCCTGGGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: LSVSAYHLSSFVIGLPHSDANNS*GCLGKN
Trigger: GTTCTTCCCCAGGCATCCCAAAGAGTTGTTGGCATC...TGAGTGAGGTAACCCAATCACAAAAGAACTCAGATGATATGCACTCACTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CAA 90 bp AGAGTCAGCTATATCAAGGTTCTTTCAGCAAAATCTTGCTGGCATATGCAATTGCCATGTCGTGCGAAGTaGGCCCAGTACTTCATCATC +
Preference number: 5 (lower is better)
Translates to: RVSYIKVLSAKSCWHMQLPCRAK*AQYFII
Trigger: GATGATGAAGTACTGGGCCAACTTCGCACGACATGG...CAATTGCATATGCCAGCAAGATTTTGCTGAAAGAACCTTGATATAGCTGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CAA 90 bp AGAGTCAGCTATATCAAGGTTCTTTCAGCAAAATCTTGCTGGCATATGCAATTGTTCTGGGACAGAGTCTaGGTCCAGAACTGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: RVSYIKVLSAKSCWHMQLFWDRV*VQNCSL
Trigger: AAGGCTGCAGTTCTGGACCAAGACTCTGTCCCAGAA...CAATTGCATATGCCAGCAAGATTTTGCTGAAAGAACCTTGATATAGCTGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CAA 90 bp TTACCAGTTGGAACATCTTCTGGGTATATATGCCCAGGAGAGGTATTGCTGGATTATTTCCTTTATTGTTaGAGCAGAGCCCATGACCAC +
Preference number: 5 (lower is better)
Translates to: LPVGTSSGYICPGEVLLDYFLYC*SRAHDH
Trigger: GTGGTCATGGGCTCTGCTCAAACAATAAAGGAAATA...ATCCAGCAATACCTCTCCTGGGCATATATACCCAGAAGATGTTCCAACTGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS-3UTR CAA 90 bp TTCTTTTGTGATTGGGTTACCTCACTCAGGATGATACCCTCCATATCTATCCATCTGAAAATATGCTACTaGAAGTGCAGGGATCACAAA +
Preference number: 5 (lower is better)
Translates to: FFCDWVTSLRMIPSISIHLKICY*KCRDHK
Trigger: TTTGTGATCCCTGCACTTCAAGTAGCATATTTTCAG...ATGGATAGATATGGAGGGTATCATCCTGAGTGAGGTAACCCAATCACAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS TCA 72 bp TGTGTGTTTCTGATGGGGCTGGCCTCTGGTGAGTCCTaGCCCTGCACATGGCCGAGGAGAAGCAGGAGTCCA +
Preference number: 6 (lower is better)
Translates to: CVFLMGLASGES*PCTWPRRSRSP
Trigger: TGGACTCCTGCTTCTCCTCGGCCATGTGCAGGGTCAGGACTCACCAGAGGCCAGCCCCATCAGAAACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059449.7
CDS TCA 72 bp CAAGGCTGCCTCGGACCTGTCCTGTATGTGTGTTTCTaGTGGGGCTGGCCTCTGGTGAGTCCCTGCACATGG +
Preference number: 6 (lower is better)
Translates to: QGCLGPVLYVCF*WGWPLVSPCTW
Trigger: CCATGTGCAGGGACTCACCAGAGGCCAGCCCCATCAGAAACACACATACAGGACAGGTCCGAGGCAGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163042.2