Pregenerated sensors for CES1H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074156Ensembl transcript IDs: ENSMUST00000145041.4
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTACTCTGTTGGTCTCTTaGGGCTGGCAGAGCTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LKNNNSPPLPLPITMTKFTLLVS*GWQSFP Trigger: TGGGAAGCTCTGCCAGCCTCAAGAGACCAACAGAGT...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| 3UTR-3UTR TCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTAGAGTATCCTCATCTTaGCTCTGTTGGTCTCTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LKNNNSPPLPLPITMTKFRVSSS*LCWSLE Trigger: CTCAAGAGACCAACAGAGTCAAGATGAGGATACTCT...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| 3UTR-3UTR CAA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAAGACTCTGTTGGTCTCTaGAGGCTGGCAGAGCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KLKNNNSPPLPLPITMTKDSVGL*RLAELP Trigger: GGGAAGCTCTGCCAGCCTCAAGAGACCAACAGAGTC...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR TCA 90 bp | AATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTTCCATTGTTGCACAATGGGGCAGCCCCTaGCCATTGGGATTCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: NSPPLPLPITMTKFSIVAQWGSP*PLGFPF Trigger: GAATGGGAATCCCAATGGTCAGGGGCTGCCCCATTG...TGCAACAATGGAAAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TCCAAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAATCCAAGAGGGGGCTTaGCAAAGGGGACTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKLKNNNSPPLPLPITMTIQEGA*QRGLPG Trigger: TCCTGGGAGTCCCCTTTGCCAAGCCCCCTCTTGGAT...TGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | AATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTTCCATTGTTGCACTCTGGAGGCTGTGGTaGAGCAAATCTCAGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: NSPPLPLPITMTKFSIVALWRLW*SKSQGS Trigger: GGATCCCTGAGATTTGCTCCACCACAGCCTCCAGAG...TGCAACAATGGAAAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TCCAAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAGACCCTGGGCTTGTTaGGTGGTGGCTCCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKLKNNNSPPLPLPITMTRPWAC*VVAPIC Trigger: GCAGATTGGAGCCACCACCCAACAAGCCCAGGGTCT...TGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | AATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTTCCATTGTTGCACTGACTGTCCAAAGATaGTCACAGAACCAGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NSPPLPLPITMTKFSIVALTVQR*SQNQGP Trigger: GGGACCCTGGTTCTGTGACCATCTTTGGACAGTCAG...TGCAACAATGGAAAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR TCA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATCCCCATGCCATGGCTaGGAGGGACAGCAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLKNNNSPPLPLPITMTKSPCHG*EGQQNQ Trigger: CTGATTCTGCTGTCCCTCTCAGCCATGGCATGGGGA...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR TCA 90 bp | AATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTTCCATTGTTGCAACTTTCACCTCCTGCTaGCTGTCCAAAGATGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSPPLPLPITMTKFSIVATFTSC*LSKDGH Trigger: GTGACCATCTTTGGACAGTCAGCAGGAGGTGAAAGT...TGCAACAATGGAAAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAAGGGCTCTGGAGGCTGTaGTGGAGCAAATCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLKNNNSPPLPLPITMTKGLWRL*WSKSQG Trigger: TCCCTGAGATTTGCTCCACCACAGCCTCCAGAGCCC...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | AATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTTCCATTGTTGCAACCACCACATTTTCATaGGCTGAGAGGGTTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSPPLPLPITMTKFSIVATTTFS*AERVRP Trigger: TGGACGAACCCTCTCAGCCCATGAAAATGTGGTGGT...TGCAACAATGGAAAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR GCA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAACAGAATCGCTTCTGGTaGCTTTGGCAGCACCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLKNNNSPPLPLPITMTKQNRFW*LWQHHS Trigger: GGAGTGGTGCTGCCAAAGGCACCAGAAGCGATTCTG...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTGGACTTTGCCATGAGTaGTGTTCACCACAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKNNNSPPLPLPITMTKFGLCHE*CSPQGV Trigger: CACCCCCTGTGGTGAACACCACTCATGGCAAAGTCC...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTAAAGCTCCAGGGCTCTaGAGGCTGTGGTGGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKNNNSPPLPLPITMTKFKAPGL*RLWWSK Trigger: TTTGCTCCACCACAGCCTCCAGAGCCCTGGAGCTTT...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTGCAGCCCCTGACCATTaGGATTCCCATTCCGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKNNNSPPLPLPITMTKFAAPDH*DSHSEQ Trigger: TTGCTCGGAATGGGAATCCCAATGGTCAGGGGCTGC...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTGGGCTTGTTGGGTGGTaGCTCCAATCTGCAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKNNNSPPLPLPITMTKFGLVGW*LQSAGN Trigger: GTTACCTGCAGATTGGAGCCACCACCCAACAAGCCC...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR TCA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAAGTGGTTTCTTGGCCCTaGGCTCAGTCCACAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KLKNNNSPPLPLPITMTKVVSWP*AQSTKT Trigger: TGTCTTTGTGGACTGAGCTCAGGGCCAAGAAACCAC...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TCCAAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAGACCACACCACTCTaGGAAATGGCTCTATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKLKNNNSPPLPLPITMTKTTPL*EMALWK Trigger: CTTCCATAGAGCCATTTCCCAGAGTGGTGTGGTCTT...TGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTAGTGTGTCCTGTCTGTaGTGGTTTCTTGGCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKNNNSPPLPLPITMTKFSVSCL*WFLGPE Trigger: CTCAGGGCCAAGAAACCACCACAGACAGGACACACT...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR TCA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAACCTAACACTGCATCTTaGGAGCACATAGGAGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KLKNNNSPPLPLPITMTKPNTAS*EHIGGY Trigger: GTACCCTCCTATGTGCTCTCAAGATGCAGTGTTAGG...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR GCA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAAACTTCCCCAGGACTTTaGCATGAGTGGTGTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KLKNNNSPPLPLPITMTKTSPGL*HEWCSP Trigger: TGGTGAACACCACTCATGGCAAAGTCCTGGGGAAGT...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTTTATCTTTCAGACCCTaGGCTTGTTGGGTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKNNNSPPLPLPITMTKFLSFRP*ACWVVA Trigger: AGCCACCACCCAACAAGCCCAGGGTCTGAAAGATAA...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR TCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTTGTAGGGCACTGTGTTaGAGTTCTTCTCAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKNNNSPPLPLPITMTKFCRALC*SSSQPE Trigger: TTCTGGCTGAGAAGAACTTCAACACAGTGCCCTACA...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTGATCCACACCATCACTaGCAGCCTGTTGGTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKNNNSPPLPLPITMTKFDPHHH*QPVGIL Trigger: AAGAATACCAACAGGCTGCCAGTGATGGTGTGGATC...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TCCAAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAGACTCTATTTTGGATaGGGTCATCTGTGCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKLKNNNSPPLPLPITMTRLYFG*GHLCLL Trigger: CAAAAGGCACAGATGACCCCATCCAAAATAGAGTCT...TGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TCCAAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACACTCCAGTCACTGTCTTaGGTTTCAATTCTGATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKLKNNNSPPLPLPITMTLQSLS*VSILMR Trigger: TCTCATCAGAATTGAAACCCAAGACAGTGACTGGAG...TGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTTCACTGGCAGCCTGTTaGTATTCTTCATCAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKNNNSPPLPLPITMTKFSLAAC*YSSSSP Trigger: TGGACTTGATGAAGAATACCAACAGGCTGCCAGTGA...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR GCA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAAGGATGGGGTCATCTGTaGCTTTTGAGTATTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLKNNNSPPLPLPITMTKGWGHL*LLSISQ Trigger: TTGAGAAATACTCAAAAGGCACAGATGACCCCATCC...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | AATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTTCCATTGTTGCATTTTACATCAGTTGGTaGAAATTCCATTATCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSPPLPLPITMTKFSIVAFYISW*KFHYHG Trigger: CCCATGATAATGGAATTTCCACCAACTGATGTAAAA...TGCAACAATGGAAAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTTTTCTCAATGGCAACTaGAATTCCATCCTCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LKNNNSPPLPLPITMTKFFLNGN*NSILWY Trigger: ATACCAGAGGATGGAATTCCAGTTGCCATTGAGAAA...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR TCA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAAAATTTGTTCAGTCACTaGACTTGCATCCTCCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLKNNNSPPLPLPITMTKNLFSH*TCILHK Trigger: TTTATGGAGGATGCAAGTTCAGTGACTGAACAAATT...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATGGAATTCCATCCTCTaGTATGTTAAAGAAATACGC | + |
|
Preference number: 4 (lower is better) Translates to: KLKNNNSPPLPLPITMTKWNSIL*YVKEIR Trigger: GCGTATTTCTTTAACATACCAGAGGATGGAATTCCA...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CCA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTAGACACAATCACAGATaGTATACCAAACATCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LKNNNSPPLPLPITMTKFRHNHR*YTKHHI Trigger: GATGTGATGTTTGGTATACCATCTGTGATTGTGTCT...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CAA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAACAGACCCTGGGCTTGTaGGGTGGTGGCTCCAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: KLKNNNSPPLPLPITMTKQTLGL*GGGSNL Trigger: CAGATTGGAGCCACCACCCAACAAGCCCAGGGTCTG...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS CCA 90 bp | CCTCAGGAACAGAGAGATGACCTTCTTGTCCAGTTTTACATCAGTTaGTGGAAATTCCATTATCATGGGCAGAGTCCAGCCAAACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PQEQRDDLLVQFYIS*WKFHYHGQSPAKLL Trigger: CAAGAGTTTGGCTGGACTCTGCCCATGATAATGGAATTTCCACCAACTGATGTAAAACTGGACAAGAAGGTCATCTCTCTGTTCCTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS CCA 90 bp | CAGGAACAGAGAGATGACCTTCTTGTCCAGTTTTACATCAGTTGGTaGAAATTCCATTATCATGGGCAGAGTCCAGCCAAACTCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QEQRDDLLVQFYISW*KFHYHGQSPAKLLL Trigger: AAGCAAGAGTTTGGCTGGACTCTGCCCATGATAATGGAATTTCCACCAACTGATGTAAAACTGGACAAGAAGGTCATCTCTCTGTTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CAA 90 bp | TTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTTCGCTTCTGGTGCCTTaGGCAGCACCACTCCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: LKNNNSPPLPLPITMTKFSLLVP*AAPLHQ Trigger: TTGATGGAGTGGTGCTGCCAAAGGCACCAGAAGCGA...AAATTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CAA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAATTTCAGACCCTGGGCTaGTTGGGTGGTGGCTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: KLKNNNSPPLPLPITMTKFQTLG*LGGGSN Trigger: ATTGGAGCCACCACCCAACAAGCCCAGGGTCTGAAA...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CAA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAAATCACTGGCAGCCTGTaGGTATTCTTCATCAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KLKNNNSPPLPLPITMTKITGSL*VFFIKS Trigger: GGACTTGATGAAGAATACCAACAGGCTGCCAGTGAT...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS-3UTR CAA 90 bp | AAATTGAAAAACAATAATTCACCTCCCTTGCCTCTGCCCATCACTATGACAAAAAGAGAGATGACCTTCTaGTCCAGTTTTACATCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KLKNNNSPPLPLPITMTKREMTF*SSFTSV Trigger: AACTGATGTAAAACTGGACAAGAAGGTCATCTCTCT...TTTTGTCATAGTGATGGGCAGAGGCAAGGGAGGTGAATTATTGTTTTTCAATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS CCA 72 bp | CACCTCCATGGATCCACACCATCACTGGCAGCCTGTTaGTATTCTTCATCAAGTCCACAGGCGTGTAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: HLHGSTPSLAAC*YSSSSPQACKH Trigger: ATGTTTACACGCCTGTGGACTTGATGAAGAATACCAACAGGCTGCCAGTGATGGTGTGGATCCATGGAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS TCA 72 bp | CTTACAGCCAGCAGTAACAGCAATTTGTTCAGTCACTaGACTTGCATCCTCCATAAACAAACCAGAAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LTASSNSNLFSH*TCILHKQTRSE Trigger: TTCACTTCTGGTTTGTTTATGGAGGATGCAAGTTCAGTGACTGAACAAATTGCTGTTACTGCTGGCTGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS CAA 90 bp | TTAAAGAAATACGCCAACTTCCTCAGGAACAGAGAGATGACCTTCTaGTCCAGTTTTACATCAGTTGGTGGAAATTCCATTATCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LKKYANFLRNREMTF*SSFTSVGGNSIIMG Trigger: GCCCATGATAATGGAATTTCCACCAACTGATGTAAAACTGGACAAGAAGGTCATCTCTCTGTTCCTGAGGAAGTTGGCGTATTTCTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS CAA 72 bp | CAGTCTTCTGAAAACCGCAGACGAATTTTCTCCTTGTaGTTTATTATAAGGTCATTGACCATCTGCCCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: QSSENRRRIFSL*FIIRSLTICPN Trigger: GTTAGGGCAGATGGTCAATGACCTTATAATAAACAACAAGGAGAAAATTCGTCTGCGGTTTTCAGAAGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||
| CDS CAA 72 bp | AGACAGTCTTCTGAAAACCGCAGACGAATTTTCTCCTaGTTGTTTATTATAAGGTCATTGACCATCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RQSSENRRRIFS*LFIIRSLTICP Trigger: AGGGCAGATGGTCAATGACCTTATAATAAACAACAAGGAGAAAATTCGTCTGCGGTTTTCAGAAGACTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145041.4 |
||