Pregenerated sensors for CES1G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057074Ensembl transcript IDs: ENSMUST00000044602.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACAGACTGGTGTCAGACGATTaGTTTTGGAAACAATATCTG | + |
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Preference number: 2 (lower is better) Translates to: LGGRGRWVSDFNPSLVYRLVSDD*FWKQYL Trigger: CAGATATTGTTTCCAAAATCAATCGTCTGACACCAG...TCTGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| 3UTR CCA 72 bp | CAGTCAGTTGTGTCACATGTCTTTAATCCCAGAACTTaGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATC | + |
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Preference number: 3 (lower is better) Translates to: QSVVSHVFNPRT*EAEAGGSLISI Trigger: GATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAAGTTCTGGGATTAAAGACATGTGACACAACTGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| 3UTR TCA 72 bp | GTTTCTCCCTATTGTGTCCCACTGGTGTCAGACGATTaGTTTTGGAAACAATATCTGACAAAAAGTCACCCT | + |
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Preference number: 3 (lower is better) Translates to: VSPYCVPLVSDD*FWKQYLTKSHP Trigger: AGGGTGACTTTTTGTCAGATATTGTTTCCAAAATCAATCGTCTGACACCAGTGGGACACAATAGGGAGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | TTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACAGACTCTGCAGGCTCTGGTaGAGCAAACCTCAGAGATCC | + |
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Preference number: 4 (lower is better) Translates to: LGGRGRWVSDFNPSLVYRLCRLW*SKPQRS Trigger: GGATCTCTGAGGTTTGCTCCACCAGAGCCTGCAGAG...TCTGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACATGGCAGCGGAGGTGGTaGTTTTACAGCCAGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: TWEAEAGGSLISILAWSTWQRRW*FYSQQE Trigger: CTCTTGCTGGCTGTAAAACCACCACCTCCGCTGCCA...TGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR TCA 90 bp | TTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACAGAGTTCATCCTCTGTGCTaGAGAATCCCCAGATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGGRGRWVSDFNPSLVYRVHPLC*RIPRCP Trigger: TGGGCATCTGGGGATTCTTCAGCACAGAGGATGAAC...TCTGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR GCA 90 bp | TTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACAGAAGCGAGCCTCAATGCTaGCTCTGGGTTTTGGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: LGGRGRWVSDFNPSLVYRSEPQC*LWVLVA Trigger: TGCTACCAAAACCCAGAGGCAGCATTGAGGCTCGCT...TCTGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR TCA 90 bp | TTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACAGACTGTTTCCTTGGCTCTaGGCTCAGTCCAAAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGGRGRWVSDFNPSLVYRLFPWL*AQSKSP Trigger: TGGACTTTTGGACTGAGCTCAGAGCCAAGGAAACAG...TCTGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR GCA 90 bp | ACTTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACACAGAATCTCTTCTGGTaGCTTTGGCAGCAACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TWEAEAGGSLISILAWSTQNLFW*LWQQHS Trigger: GGAGTGTTGCTGCCAAAGGCACCAGAAGAGATTCTG...TGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR TCA 90 bp | TTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACAGAGACTCAAGCAAGCAGTaGGAGAGATCAGACTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LGGRGRWVSDFNPSLVYRDSSKQ*ERSDSK Trigger: CTTTGAGTCTGATCTCTCTCACTGCTTGCTTGAGTC...TCTGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACACTCTTCTGGTGCCTTTaGCAGCAACACTCCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TWEAEAGGSLISILAWSTLFWCL*QQHSIN Trigger: ATTGATGGAGTGTTGCTGCCAAAGGCACCAGAAGAG...TGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | TTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACAGAAGGGATAGCTCTCTCTaGGGTCTCCAAGAAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGGRGRWVSDFNPSLVYRRDSSL*GLQENQ Trigger: TTGATTTTCTTGGAGACCCCAGAGAGAGCTATCCCT...TCTGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | TTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACAGAGATGCAGCTGTCTTCTaGTCCAGTTTTCTTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LGGRGRWVSDFNPSLVYRDAAVF*SSFLSE Trigger: CTCTGAAAGAAAACTGGACCAGAAGACAGCTGCATC...TCTGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | TTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACAGATCAACATGTTCCCTATaGGATGACCTCTCTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LGGRGRWVSDFNPSLVYRSTCSL*DDLSAV Trigger: AACAGCAGAGAGGTCATCCCATAGGGAACATGTTGA...TCTGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACATCCTCAGAAAATTTGTaGGGAATGATCTTCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: TWEAEAGGSLISILAWSTSSENL*GMIFLW Trigger: CCAAAGGAAGATCATTCCCCACAAATTTTCTGAGGA...TGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACAGAAGTCCAAAAACATTaGAATGATCCAGCCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: TWEAEAGGSLISILAWSTEVQKH*NDPAKL Trigger: GAGTTTGGCTGGATCATTCCAATGTTTTTGGACTTC...TGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | TTTGAAAGCATAAAATCAAATGTTTCTCCCTATTGTGTCCCACTGGTGTCAGACGGGCTCTGCAGGCTCTaGTGGAGCAAACCTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: FESIKSNVSPYCVPLVSDGLCRL*WSKPQR Trigger: TCTCTGAGGTTTGCTCCACCAGAGCCTGCAGAGCCC...GTCTGACACCAGTGGGACACAATAGGGAGAAACATTTGATTTTATGCTTTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR GCA 90 bp | ACTTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACAATACTTTTCAATAGCTaGTGGAATCAGCTTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TWEAEAGGSLISILAWSTILFNS*WNQLFR Trigger: TCTGAAAAGCTGATTCCAGCAGCTATTGAAAAGTAT...TGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | TTTGAAAGCATAAAATCAAATGTTTCTCCCTATTGTGTCCCACTGGTGTCAGACAGGCCTGCCACAGGATaGATGCAGCTGTCTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: FESIKSNVSPYCVPLVSDRPATG*MQLSSG Trigger: ACCAGAAGACAGCTGCATCCATCCTGTGGCAGGCCT...GTCTGACACCAGTGGGACACAATAGGGAGAAACATTTGATTTTATGCTTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR TCA 90 bp | TTTGAAAGCATAAAATCAAATGTTTCTCCCTATTGTGTCCCACTGGTGTCAGACGCTGGGACTCCAATCTaGAGGTATCCTTCCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FESIKSNVSPYCVPLVSDAGTPI*RYPSFW Trigger: CCAGAAGGAAGGATACCTTCAGATTGGAGTCCCAGC...GTCTGACACCAGTGGGACACAATAGGGAGAAACATTTGATTTTATGCTTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR GCA 90 bp | AAACAATATCTGACAAAAAGTCACCCTTTTCTTAGCTCCAGACTCTCAAACATGCTGCCACAGGATGGATaGAGCTGTCTTCTGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQYLTKSHPFLSSRLSNMLPQDG*SCLLVQ Trigger: CTGGACCAGAAGACAGCTGCATCCATCCTGTGGCAG...CATGTTTGAGAGTCTGGAGCTAAGAAAAGGGTGACTTTTTGTCAGATATTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | AAACAATATCTGACAAAAAGTCACCCTTTTCTTAGCTCCAGACTCTCAAACATGCCATGGCAGCGGAGGTaGTGGTTTTACAGCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KQYLTKSHPFLSSRLSNMPWQRR*WFYSQQ Trigger: TTGCTGGCTGTAAAACCACCACCTCCGCTGCCATGG...CATGTTTGAGAGTCTGGAGCTAAGAAAAGGGTGACTTTTTGTCAGATATTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | AAACAATATCTGACAAAAAGTCACCCTTTTCTTAGCTCCAGACTCTCAAACATGTTGTCTTTCAGCCTATaGGCTGCCTGTGCTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: KQYLTKSHPFLSSRLSNMLSFSL*AACAGT Trigger: AGTCCCAGCACAGGCAGCCCATAGGCTGAAAGACAA...CATGTTTGAGAGTCTGGAGCTAAGAAAAGGGTGACTTTTTGTCAGATATTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR GCA 90 bp | AAACAATATCTGACAAAAAGTCACCCTTTTCTTAGCTCCAGACTCTCAAACATGACTTCCCCAGGACTTTaGCATGAACGGTGTGTACCA | + |
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Preference number: 4 (lower is better) Translates to: KQYLTKSHPFLSSRLSNMTSPGL*HERCVP Trigger: TGGTACACACCGTTCATGGCAAAGTCCTGGGGAAGT...CATGTTTGAGAGTCTGGAGCTAAGAAAAGGGTGACTTTTTGTCAGATATTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | TTTGAAAGCATAAAATCAAATGTTTCTCCCTATTGTGTCCCACTGGTGTCAGACTGTGGAAGAGGTTCTTaGCCAGTGGGCTTAACACAA | + |
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Preference number: 4 (lower is better) Translates to: FESIKSNVSPYCVPLVSDCGRGS*PVGLTQ Trigger: TTGTGTTAAGCCCACTGGCCAAGAACCTCTTCCACA...GTCTGACACCAGTGGGACACAATAGGGAGAAACATTTGATTTTATGCTTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| 3UTR CAA 72 bp | TGTTTCTCCCTATTGTGTCCCACTGGTGTCAGACGATaGATTTTGGAAACAATATCTGACAAAAAGTCACCC | + |
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Preference number: 4 (lower is better) Translates to: CFSLLCPTGVRR*ILETISDKKSP Trigger: GGGTGACTTTTTGTCAGATATTGTTTCCAAAATCAATCGTCTGACACCAGTGGGACACAATAGGGAGAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR TCA 90 bp | TTTGAAAGCATAAAATCAAATGTTTCTCCCTATTGTGTCCCACTGGTGTCAGACCCAGGCGATACTGAATaGCCACTACAACCACATTTT | + |
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Preference number: 4 (lower is better) Translates to: FESIKSNVSPYCVPLVSDPGDTE*PLQPHF Trigger: AAAATGTGGTTGTAGTGGTCATTCAGTATCGCCTGG...GTCTGACACCAGTGGGACACAATAGGGAGAAACATTTGATTTTATGCTTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | AAACAATATCTGACAAAAAGTCACCCTTTTCTTAGCTCCAGACTCTCAAACATGGGAATGATCTTCCTTTaGTTGGTGAAGAGCTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: KQYLTKSHPFLSSRLSNMGMIFL*LVKSSA Trigger: CGCTGAGCTCTTCACCAACCAAAGGAAGATCATTCC...CATGTTTGAGAGTCTGGAGCTAAGAAAAGGGTGACTTTTTGTCAGATATTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | TTTGAAAGCATAAAATCAAATGTTTCTCCCTATTGTGTCCCACTGGTGTCAGACAAGAGTTCATCAGCGTaGTCTCCTAACAATTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FESIKSNVSPYCVPLVSDKSSSA*SPNNSW Trigger: CCAGGAATTGTTAGGAGACCACGCTGATGAACTCTT...GTCTGACACCAGTGGGACACAATAGGGAGAAACATTTGATTTTATGCTTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR TCA 90 bp | AAACAATATCTGACAAAAAGTCACCCTTTTCTTAGCTCCAGACTCTCAAACATGAGAATCCTTCTAAGGTaGCATACTTCCCCAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: KQYLTKSHPFLSSRLSNMRILLR*HTSPGL Trigger: AAGTCCTGGGGAAGTATGTCACCTTAGAAGGATTCT...CATGTTTGAGAGTCTGGAGCTAAGAAAAGGGTGACTTTTTGTCAGATATTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| 3UTR CAA 72 bp | TCCCTATTGTGTCCCACTGGTGTCAGACGATTGATTTaGGAAACAATATCTGACAAAAAGTCACCCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLLCPTGVRRLI*ETISDKKSPFS Trigger: AGAAAAGGGTGACTTTTTGTCAGATATTGTTTCCAAAATCAATCGTCTGACACCAGTGGGACACAATAGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR TCA 90 bp | TTTGAAAGCATAAAATCAAATGTTTCTCCCTATTGTGTCCCACTGGTGTCAGACAAATTTCATTTTCAGTaGGACCTCCAAGAGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: FESIKSNVSPYCVPLVSDKFHFQ*DLQELI Trigger: GATGAGCTCTTGGAGGTCTCACTGAAAATGAAATTT...GTCTGACACCAGTGGGACACAATAGGGAGAAACATTTGATTTTATGCTTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CCA 90 bp | AAACAATATCTGACAAAAAGTCACCCTTTTCTTAGCTCCAGACTCTCAAACATGTTTTCTTTCAGAGAGTaGGAAGTCCAAAAACATTGG | + |
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Preference number: 4 (lower is better) Translates to: KQYLTKSHPFLSSRLSNMFSFRE*EVQKHW Trigger: CCAATGTTTTTGGACTTCCCACTCTCTGAAAGAAAA...CATGTTTGAGAGTCTGGAGCTAAGAAAAGGGTGACTTTTTGTCAGATATTGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS GCA 90 bp | CAAAGGAGGGTAGGAAGTGGTGTGCTTCACGAAGCTCCAGGGCTCTaGAGGCTCTGGTGGAGCAAACCTCAGAGATCCAAGAGGGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: QRRVGSGVLHEAPGL*RLWWSKPQRSKRGL Trigger: AAGCCCCCTCTTGGATCTCTGAGGTTTGCTCCACCAGAGCCTGCAGAGCCCTGGAGCTTCGTGAAGCACACCACTTCCTACCCTCCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS CCA 90 bp | TCAATGCTGCCTCTGGGTTTTGGTAGCACAAAGGAGGGTAGGAAGTaGTGTGCTTCACGAAGCTCCAGGGCTCTGCAGGCTCTGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SMLPLGFGSTKEGRK*CASRSSRALQALVE Trigger: CTCCACCAGAGCCTGCAGAGCCCTGGAGCTTCGTGAAGCACACCACTTCCTACCCTCCTTTGTGCTACCAAAACCCAGAGGCAGCATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CAA 90 bp | ACTTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACATGCTGCCTCTGGGTTTaGGTAGCACAAAGGAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: TWEAEAGGSLISILAWSTCCLWV*VAQRRV Trigger: TACCCTCCTTTGTGCTACCAAAACCCAGAGGCAGCA...TGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CAA 90 bp | ACTTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACACTGTGGAAGAGGTTCTaGGCCAGTGGGCTTAACACA | + |
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Preference number: 5 (lower is better) Translates to: TWEAEAGGSLISILAWSTLWKRF*ASGLNT Trigger: TGTGTTAAGCCCACTGGCCAAGAACCTCTTCCACAG...TGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CAA 90 bp | ACTTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACACTCTCTGCTGTTTCCTaGGCTCTGAGCTCAGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: TWEAEAGGSLISILAWSTLSAVS*ALSSVQ Trigger: TTGGACTGAGCTCAGAGCCAAGGAAACAGCAGAGAG...TGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CAA 90 bp | ACTTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACAATGATCTTCCTTTGGTaGGTGAAGAGCTCAGCGAGC | + |
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Preference number: 5 (lower is better) Translates to: TWEAEAGGSLISILAWSTMIFLW*VKSSAS Trigger: GCTCGCTGAGCTCTTCACCAACCAAAGGAAGATCAT...TGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CAA 90 bp | ACTTGGGAGGCAGAGGCAGGTGGGTCTCTGATTTCAATCCTAGCCTGGTCTACACCAAAGTTGGCAATGTaGTCTTGGACCCAATGTAGT | + |
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Preference number: 5 (lower is better) Translates to: TWEAEAGGSLISILAWSTPKLAM*SWTQCS Trigger: ACTACATTGGGTCCAAGACAACATTGCCAACTTTGG...TGTAGACCAGGCTAGGATTGAAATCAGAGACCCACCTGCCTCTGCCTCCCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CAA 90 bp | TTTGAAAGCATAAAATCAAATGTTTCTCCCTATTGTGTCCCACTGGTGTCAGACTCTCTTCTGGTGCCTTaGGCAGCAACACTCCATCAA | + |
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Preference number: 5 (lower is better) Translates to: FESIKSNVSPYCVPLVSDSLLVP*AATLHQ Trigger: TTGATGGAGTGTTGCTGCCAAAGGCACCAGAAGAGA...GTCTGACACCAGTGGGACACAATAGGGAGAAACATTTGATTTTATGCTTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS-3UTR CAA 90 bp | TTTGAAAGCATAAAATCAAATGTTTCTCCCTATTGTGTCCCACTGGTGTCAGACCAAAAGTCCACTTCCTaGTCTTTCAGCCTATGGGCT | + |
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Preference number: 5 (lower is better) Translates to: FESIKSNVSPYCVPLVSDQKSTS*SFSLWA Trigger: AGCCCATAGGCTGAAAGACAAGGAAGTGGACTTTTG...GTCTGACACCAGTGGGACACAATAGGGAGAAACATTTGATTTTATGCTTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS CCA 72 bp | GGTGTGCTTCACGAAGCTCCAGGGCTCTGCAGGCTCTaGTGGAGCAAACCTCAGAGATCCAAGAGGGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GVLHEAPGLCRL*WSKPQRSKRGL Trigger: AAGCCCCCTCTTGGATCTCTGAGGTTTGCTCCACCAGAGCCTGCAGAGCCCTGGAGCTTCGTGAAGCACACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS GCA 72 bp | GTAGGAAGTGGTGTGCTTCACGAAGCTCCAGGGCTCTaGAGGCTCTGGTGGAGCAAACCTCAGAGATCCAAG | + |
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Preference number: 6 (lower is better) Translates to: VGSGVLHEAPGL*RLWWSKPQRSK Trigger: CTTGGATCTCTGAGGTTTGCTCCACCAGAGCCTGCAGAGCCCTGGAGCTTCGTGAAGCACACCACTTCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS CCA 72 bp | CCTCTGGGTTTTGGTAGCACAAAGGAGGGTAGGAAGTaGTGTGCTTCACGAAGCTCCAGGGCTCTGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: PLGFGSTKEGRK*CASRSSRALQA Trigger: AGCCTGCAGAGCCCTGGAGCTTCGTGAAGCACACCACTTCCTACCCTCCTTTGTGCTACCAAAACCCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS CAA 72 bp | TCCTTGGCTCTGAGCTCAGTCCAAAAGTCCACTTCCTaGTCTTTCAGCCTATGGGCTGCCTGTGCTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: SLALSSVQKSTS*SFSLWAACAGT Trigger: AGTCCCAGCACAGGCAGCCCATAGGCTGAAAGACAAGGAAGTGGACTTTTGGACTGAGCTCAGAGCCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS TCA 72 bp | CCTTCTAAGGTGACATACTTCCCCAGGACTTTGCCATaGACGGTGTGTACCACAGGCGGTAAGGATGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: PSKVTYFPRTLP*TVCTTGGKDGC Trigger: ACACCCATCCTTACCGCCTGTGGTACACACCGTTCATGGCAAAGTCCTGGGGAAGTATGTCACCTTAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS GCA 72 bp | CTTCCTTTGGTTGGTGAAGAGCTCAGCGAGCCTCAATaGTGCCTCTGGGTTTTGGTAGCACAAAGGAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: LPLVGEELSEPQ*CLWVLVAQRRV Trigger: TACCCTCCTTTGTGCTACCAAAACCCAGAGGCAGCATTGAGGCTCGCTGAGCTCTTCACCAACCAAAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS GCA 72 bp | CCAAAAGTCCACTTCCTTGTCTTTCAGCCTATGGGCTaGCTGTGCTGGGACTCCAATCTGAAGGTATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PKVHFLVFQPMG*LCWDSNLKVSF Trigger: GAAGGATACCTTCAGATTGGAGTCCCAGCACAGGCAGCCCATAGGCTGAAAGACAAGGAAGTGGACTTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS CAA 90 bp | GAGGTAGAGACAGTCCTCAGAAAATTTGTGGGGAATGATCTTCCTTaGGTTGGTGAAGAGCTCAGCGAGCCTCAATGCTGCCTCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: EVETVLRKFVGNDLP*VGEELSEPQCCLWV Trigger: AACCCAGAGGCAGCATTGAGGCTCGCTGAGCTCTTCACCAACCAAAGGAAGATCATTCCCCACAAATTTTCTGAGGACTGTCTCTACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS TCA 72 bp | CCCTATGGGATGACCTCTCTGCTGTTTCCTTGGCTCTaGGCTCAGTCCAAAAGTCCACTTCCTTGTCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PYGMTSLLFPWL*AQSKSPLPCLS Trigger: TGAAAGACAAGGAAGTGGACTTTTGGACTGAGCTCAGAGCCAAGGAAACAGCAGAGAGGTCATCCCATAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS CCA 72 bp | CAGTCCTCAGAAAATTTGTGGGGAATGATCTTCCTTTaGTTGGTGAAGAGCTCAGCGAGCCTCAATGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: QSSENLWGMIFL*LVKSSASLNAA Trigger: GGCAGCATTGAGGCTCGCTGAGCTCTTCACCAACCAAAGGAAGATCATTCCCCACAAATTTTCTGAGGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS CAA 90 bp | CTACAACCACATTTTCATGGACAGCGAGGGGCACTCCATCATAGGTaGATGCTCCATCTATCACAAGTCCACCTCCATGTATCCACACCA | + |
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Preference number: 6 (lower is better) Translates to: LQPHFHGQRGALHHR*MLHLSQVHLHVSTP Trigger: TGGTGTGGATACATGGAGGTGGACTTGTGATAGATGGAGCATCAACCTATGATGGAGTGCCCCTCGCTGTCCATGAAAATGTGGTTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS CAA 90 bp | CACAGTTCAACATGTTCCCTATGGGATGACCTCTCTGCTGTTTCCTaGGCTCTGAGCTCAGTCCAAAAGTCCACTTCCTTGTCTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: HSSTCSLWDDLSAVS*ALSSVQKSTSLSFS Trigger: GCTGAAAGACAAGGAAGTGGACTTTTGGACTGAGCTCAGAGCCAAGGAAACAGCAGAGAGGTCATCCCATAGGGAACATGTTGAACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS CCA 72 bp | AGCTGCTGGAATCAGCTTTTCAGAGATGTTAAGAATTaGGTAGGCCTGCCACAGGATGGATGCAGCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SCWNQLFRDVKN*VGLPQDGCSCL Trigger: AAGACAGCTGCATCCATCCTGTGGCAGGCCTACCCAATTCTTAACATCTCTGAAAAGCTGATTCCAGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS CAA 72 bp | TCCTCAGAAAATTTGTGGGGAATGATCTTCCTTTGGTaGGTGAAGAGCTCAGCGAGCCTCAATGCTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSENLWGMIFLW*VKSSASLNAAS Trigger: AGAGGCAGCATTGAGGCTCGCTGAGCTCTTCACCAACCAAAGGAAGATCATTCCCCACAAATTTTCTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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| CDS TCA 72 bp | ATTTTCATGGACAGCGAGGGGCACTCCATCATAGGTTaGTGCTCCATCTATCACAAGTCCACCTCCATGTAT | + |
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Preference number: 6 (lower is better) Translates to: IFMDSEGHSIIG*CSIYHKSTSMY Trigger: ATACATGGAGGTGGACTTGTGATAGATGGAGCATCAACCTATGATGGAGTGCCCCTCGCTGTCCATGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044602.8 |
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