Pregenerated sensors for CES1F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031725Ensembl transcript IDs: ENSMUST00000034178.9, ENSMUST00000140026.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACATAAATACAACATTTCCCTTCCCTGGGCTCTGCCTATATCTATaGCAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGGATTTACA | + |
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Preference number: 1 (lower is better) Translates to: DINTTFPFPGLCLYL*QSSSGSSKIHLGFT Trigger: TGTAAATCCAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGATATAGGCAGAGCCCAGGGAAGGGAAATGTTGTATTTATGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| 3UTR CAA 90 bp | GCCTATATCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTaGGATTTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: AYIYDKVLQDPPRSI*DLHTLLVEEPYLGF Trigger: GAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATCCAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGATATAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| 3UTR TCA 72 bp | ACAACATTTCCCTTCCCTGGGCTCTGCCTATATCTATaGCAAAGTTCTTCAGGATCCTCCAAGATCCATCTT | + |
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Preference number: 3 (lower is better) Translates to: TTFPFPGLCLYL*QSSSGSSKIHL Trigger: AAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGATATAGGCAGAGCCCAGGGAAGGGAAATGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| 3UTR CCA 72 bp | GGATTTACATACACTGTTAGTGGAAGAACCATATCTTaGCTTCTCTGGTATAAGCCTGGCAGAGCTTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: GFTYTVSGRTIS*LLWYKPGRALH Trigger: ATGCAAAGCTCTGCCAGGCTTATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR TCA 90 bp | GGCTCTGCCTATATCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGTTCTGGCGCATGCAGTaGACAATGACGGCAGACGTG | + |
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Preference number: 4 (lower is better) Translates to: GSAYIYDKVLQDPPRSILFWRMQ*TMTADV Trigger: CACGTCTGCCGTCATTGTTCACTGCATGCGCCAGAA...CAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGATATAGGCAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR GCA 90 bp | GGCTCTGCCTATATCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGCGATGGAACACCAAATaGCACATCCCCCATTGCGTC | + |
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Preference number: 4 (lower is better) Translates to: GSAYIYDKVLQDPPRSILRWNTK*HIPHCV Trigger: GACGCAATGGGGGATGTGGCATTTGGTGTTCCATCG...CAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGATATAGGCAGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CCA 90 bp | GGCTCTGCCTATATCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGCAGCCAGGATCTCTTTaGGGTCCTTTGGTAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: GSAYIYDKVLQDPPRSILQPGSL*GPLVAP Trigger: TGGTGCTACCAAAGGACCCCAAAGAGATCCTGGCTG...CAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGATATAGGCAGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR TCA 90 bp | TCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGGATTTACATACACGCCACTTGGTCCAAATaGCCCCAGTTTCCCCGACTG | + |
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Preference number: 4 (lower is better) Translates to: SMTKFFRILQDPSWIYIHATWSK*PQFPRL Trigger: CAGTCGGGGAAACTGGGGTCATTTGGACCAAGTGGC...GTGTATGTAAATCCAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR GCA 90 bp | GGCTCTGCCTATATCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGGGGCTTGCTGGGTGGTaGCACCAATATGAAGATATC | + |
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Preference number: 4 (lower is better) Translates to: GSAYIYDKVLQDPPRSILGLAGW*HQYEDI Trigger: GATATCTTCATATTGGTGGCACCACCCAGCAAGCCC...CAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGATATAGGCAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CCA 90 bp | GTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAAGCCTGGCAGAGCTTTGTCATTGTGGTATGGCTaGGGTTGTTTCTTGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: VSGRTISWLLWYKPGRALSLWYG*GCFLAR Trigger: CCTTGCCAAGAAACAACCCCAGCCATACCACAATGA...CAAAGCTCTGCCAGGCTTATACCAGAGAAGCCAAGATATGGTTCTTCCACTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR TCA 90 bp | GGATCCTCCAAGATCCATCTTGGATTTACATACACTGTTAGTGGAAGAACCATAGACGGCCACAGGCTGTaGAAATCCTTCTACGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: GSSKIHLGFTYTVSGRTIDGHRL*KSFYVH Trigger: GTGAACGTAGAAGGATTTTCACAGCCTGTGGCCGTC...TATGGTTCTTCCACTAACAGTGTATGTAAATCCAAGATGGATCTTGGAGGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CCA 90 bp | GACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGGATTTACATACACTGTTATCTTCCTTCAGTCTCTaGGCTTGCTGGGTGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: DKVLQDPPRSILDLHTLLSSFSL*ACWVVP Trigger: TGGCACCACCCAGCAAGCCCAGAGACTGAAGGAAGA...TAACAGTGTATGTAAATCCAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR TCA 90 bp | GGATCCTCCAAGATCCATCTTGGATTTACATACACTGTTAGTGGAAGAACCATAGTCTACCACAGGTGGTaGAGAGGGATTTCCGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: GSSKIHLGFTYTVSGRTIVYHRW*RGISAN Trigger: ATTTGCGGAAATCCCTCTTCACCACCTGTGGTAGAC...TATGGTTCTTCCACTAACAGTGTATGTAAATCCAAGATGGATCTTGGAGGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR GCA 90 bp | CTTCAGGATCCTCCAAGATCCATCTTGGATTTACATACACTGTTAGTGGAAGAACACCACATTTTCGTATaGAGAGAGAGCCCGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: LQDPPRSILDLHTLLVEEHHIFV*RESPSI Trigger: GATGGACGGGCTCTCTCTGCATACGAAAATGTGGTG...TTCTTCCACTAACAGTGTATGTAAATCCAAGATGGATCTTGGAGGATCCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR TCA 90 bp | CTTGGATTTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATGTTCATCCCCTGTGCTaGAGAATCCCCAGATACTCA | + |
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Preference number: 4 (lower is better) Translates to: LGFTYTVSGRTISWLLWYVHPLC*RIPRYS Trigger: TGAGTATCTGGGGATTCTTCAGCACAGGGGATGAAC...ATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR GCA 90 bp | TTGGATTTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATATTCAGTCTCTGGGCTTaGTGGGTGGTGCCACCAATA | + |
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Preference number: 4 (lower is better) Translates to: LDLHTLLVEEPYLGFSGIFSLWA*WVVPPI Trigger: TATTGGTGGCACCACCCAGCAAGCCCAGAGACTGAA...TATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CCA 90 bp | ATCTTGGATTTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTTTGGGAGCACATAGGTaGGTAGGTGGTGGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILDLHTLLVEEPYLGFSGLGAHR*VGGGIL Trigger: AAGAATGCCACCACCTACCCACCTATGTGCTCCCAA...ACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATCCAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR TCA 90 bp | TTGGATTTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAACTGTAACCTCCTGCTaGCTCTCCAAAGATGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LDLHTLLVEEPYLGFSGITVTSC*LSKDGH Trigger: GTGACCATCTTTGGAGAGTCAGCAGGAGGTTACAGT...TATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CCA 90 bp | GATTTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAAGCCTGGTATGCCAGTCATaGAAGCAAATTGCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: DLHTLLVEEPYLGFSGISLVCQS*KQIAPG Trigger: TCCTGGAGCAATTTGCTTCCATGACTGGCATACCAG...GCTTATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR TCA 90 bp | TTGGATTTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATATGTAAGGCACAGTGTTaGAGTTCTTCTCAGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LDLHTLLVEEPYLGFSGICKAQC*SSSQPG Trigger: TCCTGGCTGAGAAGAACTTCAACACTGTGCCTTACA...TATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR TCA 90 bp | GGATCCTCCAAGATCCATCTTGGATTTACATACACTGTTAGTGGAAGAACCATACACATTCTTGCTTGTTaGTTCCCACAATGTAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GSSKIHLGFTYTVSGRTIHILAC*FPQCKA Trigger: TGCCTTACATTGTGGGAATCAACAAGCAAGAATGTG...TATGGTTCTTCCACTAACAGTGTATGTAAATCCAAGATGGATCTTGGAGGATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR GCA 90 bp | GACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGGATTTACATACACTGTTAAAATTGCTCCAGGAGTaGAATGGCTTTCTTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: DKVLQDPPRSILDLHTLLKLLQE*NGFLLV Trigger: GACAAGAAGAAAGCCATTGCACTCCTGGAGCAATTT...TAACAGTGTATGTAAATCCAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CCA 90 bp | GGCTCTGCCTATATCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGAATTTGCTCAGTAATTaGCCTCACATCTTTGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: GSAYIYDKVLQDPPRSILNLLSN*PHIFGK Trigger: TTTACCAAAGATGTGAGGCCAATTACTGAGCAAATT...CAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGATATAGGCAGAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CCA 90 bp | TTGGATTTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAGCTCCAGGAGTGCAATaGCTTTCTTCTTGTCCAATT | + |
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Preference number: 4 (lower is better) Translates to: LDLHTLLVEEPYLGFSGIAPGVQ*LSSCPI Trigger: AATTGGACAAGAAGAAAGCCATTGCACTCCTGGAGC...TATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR TCA 90 bp | GGATCCTCCAAGATCCATCTTGGATTTACATACACTGTTAGTGGAAGAACCATAGATTCAATTTATGCATaGTCTCTAATAGCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GSSKIHLGFTYTVSGRTIDSIYA*SLIAPP Trigger: AGGAGGAGCTATTAGAGATCATGCATAAATTGAATC...TATGGTTCTTCCACTAACAGTGTATGTAAATCCAAGATGGATCTTGGAGGATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CCA 90 bp | TTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAAGCCTGCTTCTCAACAGCAACTaGAATAATATCCTCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LHTLLVEEPYLGFSGISLLLNSN*NNILWY Trigger: ATACCAGAGGATATTATTCCAGTTGCTGTTGAGAAG...CAGGCTTATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CCA 90 bp | ATCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGGATTTACATACATTTCTGATCATACTTTaGCCAATGAGGCAGCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: IYDKVLQDPPRSILDLHTFLIIL*PMRQPF Trigger: AAAGGGCTGCCTCATTGGCCAAAGTATGATCAGAAA...TGTATGTAAATCCAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CCA 90 bp | ATCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGGATTTACATACAACTGGTCGCTATTTTTaGTATCTCCTTGTAAACTCA | + |
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Preference number: 4 (lower is better) Translates to: IYDKVLQDPPRSILDLHTTGRYF*YLLVNS Trigger: TGAGTTTACAAGGAGATACCAAAAATAGCGACCAGT...TGTATGTAAATCCAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CCA 90 bp | GGTGGGAGCTCCAGTGTCTCTGTGGCCACGGGACACAATCACCGATaGAACACCAAATGCCACATCCCCCATTGCGTCGAGAACTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: GGSSSVSVATGHNHR*NTKCHIPHCVENSL Trigger: GAGGGAGTTCTCGACGCAATGGGGGATGTGGCATTTGGTGTTCCATCGGTGATTGTGTCCCGTGGCCACAGAGACACTGGAGCTCCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS GCA 90 bp | AGTGTCTCTGTGGCCACGGGACACAATCACCGATGGAACACCAAATaGCACATCCCCCATTGCGTCGAGAACTCCCTCTCTGATCTGATC | + |
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Preference number: 5 (lower is better) Translates to: SVSVATGHNHRWNTK*HIPHCVENSLSDLI Trigger: GATCAGATCAGAGAGGGAGTTCTCGACGCAATGGGGGATGTGGCATTTGGTGTTCCATCGGTGATTGTGTCCCGTGGCCACAGAGACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS GCA 90 bp | ACGGGACACAATCACCGATGGAACACCAAATGCCACATCCCCCATTaGGTCGAGAACTCCCTCTCTGATCTGATCAGGGTCATCACTACC | + |
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Preference number: 5 (lower is better) Translates to: TGHNHRWNTKCHIPH*VENSLSDLIRVITT Trigger: GGTAGTGATGACCCTGATCAGATCAGAGAGGGAGTTCTCGACGCAATGGGGGATGTGGCATTTGGTGTTCCATCGGTGATTGTGTCCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | ACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAAGCCTGGCAGAGCTTCAGTCTCTGGGCTaGCTGGGTGGTGCCACCAAT | + |
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Preference number: 5 (lower is better) Translates to: TLLVEEPYLGFSGISLAELQSLG*LGGATN Trigger: ATTGGTGGCACCACCCAGCAAGCCCAGAGACTGAAG...CTCTGCCAGGCTTATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | ACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAAGCCTGGCAGAGGTAGAAATCCCGTCATaGTTGGCAGAAGCCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: TLLVEEPYLGFSGISLAEVEIPS*LAEASH Trigger: GTGGCTGGCTTCTGCCAACAATGACGGGATTTCTAC...CTCTGCCAGGCTTATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS GCA 90 bp | ATGACGGCAGACGTGGTGGTCTTACAGCCAGCAGTAACAGCAATTTaGTCAGTAATTGGCCTCACATCTTTGGTAAACATTCCAGGAATG | + |
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Preference number: 5 (lower is better) Translates to: MTADVVVLQPAVTAI*SVIGLTSLVNIPGM Trigger: CATTCCTGGAATGTTTACCAAAGATGTGAGGCCAATTACTGAGCAAATTGCTGTTACTGCTGGCTGTAAGACCACCACGTCTGCCGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS GCA 90 bp | AGAAAGTCACTTCCTCTTCCTTCAGTCTCTGGGCTTGCTGGGTGGTaGCACCAATATGAAGATATCCTTCTTTCTGATCATACTTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: RKSLPLPSVSGLAGW*HQYEDILLSDHTLA Trigger: GGCCAAAGTATGATCAGAAAGAAGGATATCTTCATATTGGTGGCACCACCCAGCAAGCCCAGAGACTGAAGGAAGAGGAAGTGACTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CCA 90 bp | CCTCTGGTATGCCAGTCATGGAAGCAAATTGCTCCAGGAGTGCAATaGCTTTCTTCTTGTCCAATTTTACATCAGCTGGTAGAAATCCCG | + |
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Preference number: 5 (lower is better) Translates to: PLVCQSWKQIAPGVQ*LSSCPILHQLVEIP Trigger: CGGGATTTCTACCAGCTGATGTAAAATTGGACAAGAAGAAAGCCATTGCACTCCTGGAGCAATTTGCTTCCATGACTGGCATACCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | GTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAAGCCTGGCAGAGCTTTGGTAGCCTACTGTTCTTaGAAAAGTCCGCAGGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: VSGRTISWLLWYKPGRALVAYCS*KSPQEC Trigger: ACACTCCTGCGGACTTTTCAAAGAACAGTAGGCTAC...CAAAGCTCTGCCAGGCTTATACCAGAGAAGCCAAGATATGGTTCTTCCACTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | TCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGGATTTACATACACGGCTGGGGTTGTTTCTaGGCAAGGGACTGTGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SMTKFFRILQDPSWIYIHGWGCF*ARDCVQ Trigger: CTGGACACAGTCCCTTGCCAAGAAACAACCCCAGCC...GTGTATGTAAATCCAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CCA 90 bp | TCCAGAAAGTCACTTCCTCTTCCTTCAGTCTCTGGGCTTGCTGGGTaGTGCCACCAATATGAAGATATCCTTCTTTCTGATCATACTTTG | + |
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Preference number: 5 (lower is better) Translates to: SRKSLPLPSVSGLAG*CHQYEDILLSDHTL Trigger: CAAAGTATGATCAGAAAGAAGGATATCTTCATATTGGTGGCACCACCCAGCAAGCCCAGAGACTGAAGGAAGAGGAAGTGACTTTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | TCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGGATTTACATACACTCAGCCAGGATCTCTTaGGGGTCCTTTGGTAGCACC | + |
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Preference number: 5 (lower is better) Translates to: SMTKFFRILQDPSWIYIHSARIS*GSFGST Trigger: GGTGCTACCAAAGGACCCCAAAGAGATCCTGGCTGA...GTGTATGTAAATCCAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CCA 90 bp | GGGTCCTTTGGTAGCACCACTCCATCAAGCACACTTGTCACGAACTaGTCGCTATTTTTGGTATCTCCTTGTAAACTCAGTTTATACAGA | + |
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Preference number: 5 (lower is better) Translates to: GSFGSTTPSSTLVTN*SLFLVSPCKLSLYR Trigger: TCTGTATAAACTGAGTTTACAAGGAGATACCAAAAATAGCGACCAGTTCGTGACAAGTGTGCTTGATGGAGTGGTGCTACCAAAGGACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | ACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAAGCCTGGCAGAGATTGGCCTCACATCTTaGGTAAACATTCCAGGAATG | + |
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Preference number: 5 (lower is better) Translates to: TLLVEEPYLGFSGISLAEIGLTS*VNIPGM Trigger: CATTCCTGGAATGTTTACCAAAGATGTGAGGCCAAT...CTCTGCCAGGCTTATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | GGATCCTCCAAGATCCATCTTGGATTTACATACACTGTTAGTGGAAGAACCATAAGTCATGGAAGCAAATaGCTCCAGGAGTGCAATGGC | + |
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Preference number: 5 (lower is better) Translates to: GSSKIHLGFTYTVSGRTISHGSK*LQECNG Trigger: GCCATTGCACTCCTGGAGCAATTTGCTTCCATGACT...TATGGTTCTTCCACTAACAGTGTATGTAAATCCAAGATGGATCTTGGAGGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | TCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGGATTTACATACACCGCAAATCACACAGGTaGCTAGAGACACCAGGAACA | + |
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Preference number: 5 (lower is better) Translates to: SMTKFFRILQDPSWIYIHRKSHR*LETPGT Trigger: TGTTCCTGGTGTCTCTAGCAACCTGTGTGATTTGCG...GTGTATGTAAATCCAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | GATTTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAAGCTCTCTTTGGGGTCCTTaGGTAGCACCACTCCATCAA | + |
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Preference number: 5 (lower is better) Translates to: DLHTLLVEEPYLGFSGISSLWGP*VAPLHQ Trigger: TTGATGGAGTGGTGCTACCAAAGGACCCCAAAGAGA...GCTTATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | TTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAAGCCTGTCTCCTACTACATTCTaGGGTCTTTGGGGTGATGAG | + |
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Preference number: 5 (lower is better) Translates to: LHTLLVEEPYLGFSGISLSPTTF*GLWGDE Trigger: CTCATCACCCCAAAGACCCAAGAATGTAGTAGGAGA...CAGGCTTATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | TCTATGACAAAGTTCTTCAGGATCCTCCAAGATCCATCTTGGATTTACATACACCTTTCTGATCATACTTaGGCCAATGAGGCAGCCCTT | + |
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Preference number: 5 (lower is better) Translates to: SMTKFFRILQDPSWIYIHLSDHT*ANEAAL Trigger: AAGGGCTGCCTCATTGGCCAAAGTATGATCAGAAAG...GTGTATGTAAATCCAAGATGGATCTTGGAGGATCCTGAAGAACTTTGTCATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | CTTCAGGATCCTCCAAGATCCATCTTGGATTTACATACACTGTTAGTGGAAGAAGGTCATCACTACCTTTaGTGTACTTCTCAACAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LQDPPRSILDLHTLLVEEGHHYL*CTSQQQ Trigger: TTGCTGTTGAGAAGTACACAAAAGGTAGTGATGACC...TTCTTCCACTAACAGTGTATGTAAATCCAAGATGGATCTTGGAGGATCCTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | TTGGATTTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAAGCAGTAACAGCAATTaGCTCAGTAATTGGCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: LDLHTLLVEEPYLGFSGISSNSN*LSNWPH Trigger: GTGAGGCCAATTACTGAGCAAATTGCTGTTACTGCT...TATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | ATCTTGGATTTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATTTTCTCCTTTCTATaGGTTATGAGGTCATTGACC | + |
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Preference number: 5 (lower is better) Translates to: ILDLHTLLVEEPYLGFSGIFSFL*VMRSLT Trigger: GGTCAATGACCTCATAACCAATAGAAAGGAGAAAAT...ACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATCCAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS-3UTR CAA 90 bp | TTGGATTTACATACACTGTTAGTGGAAGAACCATATCTTGGCTTCTCTGGTATAGCAATGGCTTTCTTCTaGTCCAATTTTACATCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LDLHTLLVEEPYLGFSGIAMAFF*SNFTSA Trigger: AGCTGATGTAAAATTGGACAAGAAGAAAGCCATTGC...TATACCAGAGAAGCCAAGATATGGTTCTTCCACTAACAGTGTATGTAAATCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS GCA 72 bp | GTGGCCACGGGACACAATCACCGATGGAACACCAAATaGCACATCCCCCATTGCGTCGAGAACTCCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VATGHNHRWNTK*HIPHCVENSLS Trigger: AGAGAGGGAGTTCTCGACGCAATGGGGGATGTGGCATTTGGTGTTCCATCGGTGATTGTGTCCCGTGGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CCA 72 bp | TCCAGTGTCTCTGTGGCCACGGGACACAATCACCGATaGAACACCAAATGCCACATCCCCCATTGCGTCGAG | + |
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Preference number: 6 (lower is better) Translates to: SSVSVATGHNHR*NTKCHIPHCVE Trigger: CTCGACGCAATGGGGGATGTGGCATTTGGTGTTCCATCGGTGATTGTGTCCCGTGGCCACAGAGACACTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS GCA 72 bp | ATTGGTTATGAGGTCATTGACCGCCTGTCCTCTAGCTaGATCTTGGGAGCACATAGGTGGGTAGGTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: IGYEVIDRLSSS*ILGAHRWVGGG Trigger: GCCACCACCTACCCACCTATGTGCTCCCAAGATGCAGCTAGAGGACAGGCGGTCAATGACCTCATAACCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 72 bp | CATTTTCGTATGCAGAGAGAGCCCGTCCATCAAAGCTaGATGCCCCACCCAGCTTCAGTCCACCTCCATGGA | + |
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Preference number: 6 (lower is better) Translates to: HFRMQREPVHQS*MPHPASVHLHG Trigger: TCCATGGAGGTGGACTGAAGCTGGGTGGGGCATCAAGCTTTGATGGACGGGCTCTCTCTGCATACGAAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS TCA 72 bp | ATTTTCGTATGCAGAGAGAGCCCGTCCATCAAAGCTTaGTGCCCCACCCAGCTTCAGTCCACCTCCATGGAT | + |
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Preference number: 6 (lower is better) Translates to: IFVCRESPSIKA*CPTQLQSTSMD Trigger: ATCCATGGAGGTGGACTGAAGCTGGGTGGGGCATCAAGCTTTGATGGACGGGCTCTCTCTGCATACGAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS GCA 72 bp | AATCACCGATGGAACACCAAATGCCACATCCCCCATTaGGTCGAGAACTCCCTCTCTGATCTGATCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: NHRWNTKCHIPH*VENSLSDLIRV Trigger: GACCCTGATCAGATCAGAGAGGGAGTTCTCGACGCAATGGGGGATGTGGCATTTGGTGTTCCATCGGTGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 72 bp | GGCACAGTGTTGAAGTTCTTCTCAGCCAGGATCTCTTaGGGGTCCTTTGGTAGCACCACTCCATCAAGCACA | + |
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Preference number: 6 (lower is better) Translates to: GTVLKFFSARIS*GSFGSTTPSST Trigger: TGTGCTTGATGGAGTGGTGCTACCAAAGGACCCCAAAGAGATCCTGGCTGAGAAGAACTTCAACACTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 72 bp | CCAGAAAGTCACTTCCTCTTCCTTCAGTCTCTGGGCTaGCTGGGTGGTGCCACCAATATGAAGATATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PESHFLFLQSLG*LGGATNMKISF Trigger: GAAGGATATCTTCATATTGGTGGCACCACCCAGCAAGCCCAGAGACTGAAGGAAGAGGAAGTGACTTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 90 bp | GGACTGTGTCCAGAAAGTCACTTCCTCTTCCTTCAGTCTCTGGGCTaGCTGGGTGGTGCCACCAATATGAAGATATCCTTCTTTCTGATC | + |
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Preference number: 6 (lower is better) Translates to: GLCPESHFLFLQSLG*LGGATNMKISFFLI Trigger: GATCAGAAAGAAGGATATCTTCATATTGGTGGCACCACCCAGCAAGCCCAGAGACTGAAGGAAGAGGAAGTGACTTTCTGGACACAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 72 bp | TGGGGTCCTTTGGTAGCACCACTCCATCAAGCACACTaGTCACGAACTGGTCGCTATTTTTGGTATCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: WGPLVAPLHQAH*SRTGRYFWYLL Trigger: AAGGAGATACCAAAAATAGCGACCAGTTCGTGACAAGTGTGCTTGATGGAGTGGTGCTACCAAAGGACCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 90 bp | GGATCTCTTTGGGGTCCTTTGGTAGCACCACTCCATCAAGCACACTaGTCACGAACTGGTCGCTATTTTTGGTATCTCCTTGTAAACTCA | + |
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Preference number: 6 (lower is better) Translates to: GSLWGPLVAPLHQAH*SRTGRYFWYLLVNS Trigger: TGAGTTTACAAGGAGATACCAAAAATAGCGACCAGTTCGTGACAAGTGTGCTTGATGGAGTGGTGCTACCAAAGGACCCCAAAGAGATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS GCA 72 bp | CTTCCTCTTCCTTCAGTCTCTGGGCTTGCTGGGTGGTaGCACCAATATGAAGATATCCTTCTTTCTGATCAT | + |
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Preference number: 6 (lower is better) Translates to: LPLPSVSGLAGW*HQYEDILLSDH Trigger: ATGATCAGAAAGAAGGATATCTTCATATTGGTGGCACCACCCAGCAAGCCCAGAGACTGAAGGAAGAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CCA 72 bp | TCACTTCCTCTTCCTTCAGTCTCTGGGCTTGCTGGGTaGTGCCACCAATATGAAGATATCCTTCTTTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SLPLPSVSGLAG*CHQYEDILLSD Trigger: ATCAGAAAGAAGGATATCTTCATATTGGTGGCACCACCCAGCAAGCCCAGAGACTGAAGGAAGAGGAAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 72 bp | AGATGGATTTTCTCCTTTCTATTGGTTATGAGGTCATaGACCGCCTGTCCTCTAGCTGCATCTTGGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RWIFSFLLVMRS*TACPLAASWEH Trigger: GTGCTCCCAAGATGCAGCTAGAGGACAGGCGGTCAATGACCTCATAACCAATAGAAAGGAGAAAATCCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 72 bp | ACAGGTGGTGAAGAGGGATTTCCTTTGGCTCCATTCTaGAACAGCAGACAATCTTCTCTAATTCCCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: TGGEEGFPLAPF*NSRQSSLIPPQ Trigger: CTGTGGGGGAATTAGAGAAGATTGTCTGCTGTTCAAGAATGGAGCCAAAGGAAATCCCTCTTCACCACCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140026.2 |
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| CDS CAA 90 bp | AATGACGGCAGACGTGGTGGTCTTACAGCCAGCAGTAACAGCAATTaGCTCAGTAATTGGCCTCACATCTTTGGTAAACATTCCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: NDGRRGGLTASSNSN*LSNWPHIFGKHSRN Trigger: ATTCCTGGAATGTTTACCAAAGATGTGAGGCCAATTACTGAGCAAATTGCTGTTACTGCTGGCTGTAAGACCACCACGTCTGCCGTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 90 bp | CCAGTCATGGAAGCAAATTGCTCCAGGAGTGCAATGGCTTTCTTCTaGTCCAATTTTACATCAGCTGGTAGAAATCCCGTCATTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: PVMEANCSRSAMAFF*SNFTSAGRNPVIVG Trigger: GCCAACAATGACGGGATTTCTACCAGCTGATGTAAAATTGGACAAGAAGAAAGCCATTGCACTCCTGGAGCAATTTGCTTCCATGACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CCA 72 bp | GGTAGCACCACTCCATCAAGCACACTTGTCACGAACTaGTCGCTATTTTTGGTATCTCCTTGTAAACTCAGT | + |
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Preference number: 6 (lower is better) Translates to: GSTTPSSTLVTN*SLFLVSPCKLS Trigger: ACTGAGTTTACAAGGAGATACCAAAAATAGCGACCAGTTCGTGACAAGTGTGCTTGATGGAGTGGTGCTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS GCA 72 bp | GACGTGGTGGTCTTACAGCCAGCAGTAACAGCAATTTaGTCAGTAATTGGCCTCACATCTTTGGTAAACATT | + |
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Preference number: 6 (lower is better) Translates to: DVVVLQPAVTAI*SVIGLTSLVNI Trigger: AATGTTTACCAAAGATGTGAGGCCAATTACTGAGCAAATTGCTGTTACTGCTGGCTGTAAGACCACCACGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CCA 72 bp | ACCAATATGAAGATATCCTTCTTTCTGATCATACTTTaGCCAATGAGGCAGCCCTTTGCCATTAGGGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: TNMKISFFLIIL*PMRQPFAIRVP Trigger: GGGAACCCTAATGGCAAAGGGCTGCCTCATTGGCCAAAGTATGATCAGAAAGAAGGATATCTTCATATTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 72 bp | GTAACAGCAATTTGCTCAGTAATTGGCCTCACATCTTaGGTAAACATTCCAGGAATGAAGGCCACACCACTC | + |
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Preference number: 6 (lower is better) Translates to: VTAICSVIGLTS*VNIPGMKATPL Trigger: GAGTGGTGTGGCCTTCATTCCTGGAATGTTTACCAAAGATGTGAGGCCAATTACTGAGCAAATTGCTGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 72 bp | AGACGTGGTGGTCTTACAGCCAGCAGTAACAGCAATTaGCTCAGTAATTGGCCTCACATCTTTGGTAAACAT | + |
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Preference number: 6 (lower is better) Translates to: RRGGLTASSNSN*LSNWPHIFGKH Trigger: ATGTTTACCAAAGATGTGAGGCCAATTACTGAGCAAATTGCTGTTACTGCTGGCTGTAAGACCACCACGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 72 bp | GAAGCAAATTGCTCCAGGAGTGCAATGGCTTTCTTCTaGTCCAATTTTACATCAGCTGGTAGAAATCCCGTC | + |
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Preference number: 6 (lower is better) Translates to: EANCSRSAMAFF*SNFTSAGRNPV Trigger: GACGGGATTTCTACCAGCTGATGTAAAATTGGACAAGAAGAAAGCCATTGCACTCCTGGAGCAATTTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS GCA 72 bp | ATAATATCCTCTGGTATGCCAGTCATGGAAGCAAATTaGTCCAGGAGTGCAATGGCTTTCTTCTTGTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: IISSGMPVMEAN*SRSAMAFFLSN Trigger: ATTGGACAAGAAGAAAGCCATTGCACTCCTGGAGCAATTTGCTTCCATGACTGGCATACCAGAGGATATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 72 bp | AATAATATCCTCTGGTATGCCAGTCATGGAAGCAAATaGCTCCAGGAGTGCAATGGCTTTCTTCTTGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: NNILWYASHGSK*LQECNGFLLVQ Trigger: TTGGACAAGAAGAAAGCCATTGCACTCCTGGAGCAATTTGCTTCCATGACTGGCATACCAGAGGATATTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 90 bp | AGCAACTGGAATAATATCCTCTGGTATGCCAGTCATGGAAGCAAATaGCTCCAGGAGTGCAATGGCTTTCTTCTTGTCCAATTTTACATC | + |
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Preference number: 6 (lower is better) Translates to: SNWNNILWYASHGSK*LQECNGFLLVQFYI Trigger: GATGTAAAATTGGACAAGAAGAAAGCCATTGCACTCCTGGAGCAATTTGCTTCCATGACTGGCATACCAGAGGATATTATTCCAGTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CCA 72 bp | CTTACAGCCAGCAGTAACAGCAATTTGCTCAGTAATTaGCCTCACATCTTTGGTAAACATTCCAGGAATGAA | + |
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Preference number: 6 (lower is better) Translates to: LTASSNSNLLSN*PHIFGKHSRNE Trigger: TTCATTCCTGGAATGTTTACCAAAGATGTGAGGCCAATTACTGAGCAAATTGCTGTTACTGCTGGCTGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CAA 72 bp | TCTTCAGAAAATTCAAGATGGATTTTCTCCTTTCTATaGGTTATGAGGTCATTGACCGCCTGTCCTCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSENSRWIFSFL*VMRSLTACPLA Trigger: AGCTAGAGGACAGGCGGTCAATGACCTCATAACCAATAGAAAGGAGAAAATCCATCTTGAATTTTCTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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| CDS CCA 72 bp | CATCAAGCACACTTGTCACGAACTGGTCGCTATTTTTaGTATCTCCTTGTAAACTCAGTTTATACAGATTCA | + |
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Preference number: 6 (lower is better) Translates to: HQAHLSRTGRYF*YLLVNSVYTDS Trigger: TGAATCTGTATAAACTGAGTTTACAAGGAGATACCAAAAATAGCGACCAGTTCGTGACAAGTGTGCTTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034178.9 |
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