Pregenerated sensors for CES1E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061959Ensembl transcript IDs: ENSMUST00000034173.14, ENSMUST00000176282.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAATATTCTCTCTCTGGCCTCTGTCCACTCCCACCACACAATTCTaGAGTCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAG | + |
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Preference number: 1 (lower is better) Translates to: QIFSLWPLSTPTTQF*SLPKALATIIFHVK Trigger: CTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGAGGCCAGAGAGAGAATATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR TCA 90 bp | TGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGGCCACAATCAGTCCACCATGGGTGGTaGGGATGGATGTCCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: CPLPPHNSAVSPKPWPQSVHHGW*GWMSCP Trigger: GGGGCAGGACATCCATCCTCACCACCCATGGTGGAC...TGATTGTGGCCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR TCA 90 bp | CTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGGCCACAATCGTTCATCCCCTGTGCTaGAGAATCCCCAGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSTPTTQFCSLPKALATIVHPLC*RIPRCP Trigger: TGGGCATCTGGGGATTCTTCAGCACAGGGGATGAAC...GATTGTGGCCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR TCA 90 bp | TCTGGCCTCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGGTGTGAATGCTGCAAGTaGCACCAGGATCAGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SGLCPLPPHNSAVSPKPWCECCK*HQDQSR Trigger: TCTGCTCTGATCCTGGTGTCACTTGCAGCATTCACA...CCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGAGGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CCA 90 bp | CTCTCTGGCCTCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTCTCCATCAAGCACAGTaGGAACAAAGGGATGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LSGLCPLPPHNSAVSPKPLHQAQ*EQRDGS Trigger: AGAGCCATCCCTTTGTTCCCACTGTGCTTGATGGAG...AGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGAGGCCAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CCA 90 bp | TGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGGCCACAATCAAGCTTCTGGGCTTGTTaGGTGGTGGCTCCAATCTGC | + |
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Preference number: 4 (lower is better) Translates to: CPLPPHNSAVSPKPWPQSSFWAC*VVAPIC Trigger: GCAGATTGGAGCCACCACCCAACAAGCCCAGAAGCT...TGATTGTGGCCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR GCA 90 bp | CTCTGGCCTCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGAATGGCCACTGCAATTaGATCCTCAGGGAGGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: LWPLSTPTTQFCSLPKALNGHCN*ILREVK Trigger: CTTAACCTCCCTGAGGATGCAATTGCAGTGGCCATT...CAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGAGGCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CCA 90 bp | TCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGGCCACAATGGGCTTGTTGGGTGGTaGCTCCAATCTGCAGATAAC | + |
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Preference number: 4 (lower is better) Translates to: SVHSHHTILQSPQSLGHNGLVGW*LQSADN Trigger: GTTATCTGCAGATTGGAGCCACCACCCAACAAGCCC...ATTGTGGCCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR GCA 90 bp | TCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCTCATTTGGGGGAGCTCCAGGGCTCTaGAGGCTGTGGTGGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SPQSLGHNHLPCKVVSFGGAPGL*RLWWSK Trigger: TTTGCTCCACCACAGCCTGCAGAGCCCTGGAGCTCC...CCCAAATGAGACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CCA 90 bp | CTCTGGCCTCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGCCATGGCAGCGGAAGTaGTGTTTTTACAACCAGATA | + |
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Preference number: 4 (lower is better) Translates to: LWPLSTPTTQFCSLPKALPWQRK*CFYNQI Trigger: TATCTGGTTGTAAAAACACCACTTCCGCTGCCATGG...CAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGAGGCCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CCA 90 bp | TCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGGCCACAATAGGGATGGCTCTGTCTaGAGTCTCCATGCAAATCCA | + |
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Preference number: 4 (lower is better) Translates to: SVHSHHTILQSPQSLGHNRDGSV*SLHANP Trigger: TGGATTTGCATGGAGACTCCAGACAGAGCCATCCCT...ATTGTGGCCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR TCA 90 bp | TGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGGCCACAATCACAAACTCTTGCTTGTTaGTTCCCACGATGTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPLPPHNSAVSPKPWPQSQTLAC*FPRCRA Trigger: TGCCCTACATCGTGGGAATCAACAAGCAAGAGTTTG...TGATTGTGGCCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CCA 90 bp | TCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGGCCACAATTATTTGCCCTGTCACTaGGTCTTGGAAGCACATAGG | + |
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Preference number: 4 (lower is better) Translates to: SVHSHHTILQSPQSLGHNYLPCH*VLEAHR Trigger: CCTATGTGCTTCCAAGACCCAGTGACAGGGCAAATA...ATTGTGGCCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CCA 90 bp | TCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGGCCACAATTTTTCTTTCAGCTTCTaGGCTTGTTGGGTGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SVHSHHTILQSPQSLGHNFSFSF*ACWVVA Trigger: AGCCACCACCCAACAAGCCCAGAAGCTGAAAGAAAA...ATTGTGGCCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR TCA 90 bp | CAGTCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCTCATTTGTCCTGCCCCTGCTGTaGATGCTGCAAGTGACACCA | + |
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Preference number: 4 (lower is better) Translates to: QSPQSLGHNHLPCKVVSFVLPLL*MLQVTP Trigger: TGGTGTCACTTGCAGCATTCACAGCAGGGGCAGGAC...AAATGAGACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR GCA 90 bp | CAGTCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCTCATTTCTTCTTGACCAGGCCTaGAGTGAGGGCCACACCACT | + |
|
Preference number: 4 (lower is better) Translates to: QSPQSLGHNHLPCKVVSFLLDQA*SEGHTT Trigger: AGTGGTGTGGCCCTCACTGCAGGCCTGGTCAAGAAG...AAATGAGACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CCA 90 bp | CTGCAGTCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCTCAGTGGGAACAAAGGGATaGCTCTGTCTGGAGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LQSPQSLGHNHLPCKVVSVGTKG*LCLESP Trigger: TGGAGACTCCAGACAGAGCCATCCCTTTGTTCCCAC...TGAGACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGACTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR TCA 90 bp | CTCTGGCCTCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGTTTTACAACCAGATATaGCAGCAATTTTCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWPLSTPTTQFCSLPKALFYNQI*QQFSQP Trigger: TGGCTGAGAAAATTGCTGTCATATCTGGTTGTAAAA...CAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGAGGCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR TCA 90 bp | CTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGGCCACAATCATCTGGTTTCATTTCTaGCGAGAAGCTTGGACTATA | + |
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Preference number: 4 (lower is better) Translates to: LSTPTTQFCSLPKALATIIWFHF*REAWTI Trigger: TATAGTCCAAGCTTCTCGTCAGAAATGAAACCAGAT...GATTGTGGCCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR GCA 90 bp | CTGCAGTCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCTCAAGGTCATTGACTATTTaGCCTGTCACTGGGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LQSPQSLGHNHLPCKVVSRSLTI*PVTGSW Trigger: CCAAGACCCAGTGACAGGGCAAATAGTCAATGACCT...TGAGACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGACTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CCA 90 bp | ATTCTGCAGTCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCCTCCTCAGGCATCTTTaGCAGCAACACTCCATCAAG | + |
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Preference number: 4 (lower is better) Translates to: ILQSPQSLGHNHLPCKVVLLRHL*QQHSIK Trigger: CTTGATGGAGTGTTGCTGCCAAAGATGCCTGAGGAG...GACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGACTGCAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR TCA 90 bp | CAGTCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCTCATTTTGTAGGGCACTGTGTTaGAGTTCTTCTCAGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QSPQSLGHNHLPCKVVSFCRALC*SSSQPG Trigger: TCCTGGCTGAGAAGAACTTCAACACAGTGCCCTACA...AAATGAGACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CCA 90 bp | TGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGGCCACAATCAATCAATTCCAGAAGTTaGTCTTTATTTCTGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: CPLPPHNSAVSPKPWPQSINSRS*SLFLPV Trigger: CACAGGCAGAAATAAAGACCAACTTCTGGAATTGAT...TGATTGTGGCCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR GCA 90 bp | CAGTCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCTCATTTACCACGACATTTTCATaGGTAGACAGGACCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QSPQSLGHNHLPCKVVSFTTTFS*VDRTSP Trigger: TGGACTGGTCCTGTCTACGCATGAAAATGTCGTGGT...AAATGAGACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CCA 90 bp | CTGCAGTCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCTCAGTAGTTCATCATAGTTaGCAGAATCCAGCCAAACTC | + |
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Preference number: 4 (lower is better) Translates to: LQSPQSLGHNHLPCKVVSVVHHS*QNPAKL Trigger: GAGTTTGGCTGGATTCTGCCAACTATGATGAACTAC...TGAGACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGACTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CCA 90 bp | TTTCAAATTGAGTCCACATGTGCAAATATTCTCTCTCTGGCCTCTGTCCACTCCGGACACAATCACAGATaGTACACCGAATACCACATC | + |
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Preference number: 4 (lower is better) Translates to: FQIESTCANILSLASVHSGHNHR*YTEYHI Trigger: GATGTGGTATTCGGTGTACCATCTGTGATTGTGTCC...GGAGTGGACAGAGGCCAGAGAGAGAATATTTGCACATGTGGACTCAATTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR GCA 90 bp | TCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCTCATTTGGGTGTCTGGAGTCTCCATaGAAATCCAGCTTAAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SPQSLGHNHLPCKVVSFGCLESP*KSSLKR Trigger: TCTTTTTAAGCTGGATTTGCATGGAGACTCCAGACA...CCCAAATGAGACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR GCA 90 bp | TTTCAAATTGAGTCCACATGTGCAAATATTCTCTCTCTGGCCTCTGTCCACTCCGTTGGTCTTTATTTCTaGCTGTGTAATCTTTATCTC | + |
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Preference number: 4 (lower is better) Translates to: FQIESTCANILSLASVHSVGLYF*LCNLYL Trigger: GAGATAAAGATTACACAGGCAGAAATAAAGACCAAC...GGAGTGGACAGAGGCCAGAGAGAGAATATTTGCACATGTGGACTCAATTTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CAA 90 bp | CTCTCTGGCCTCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTCCCTGTCACTGGGTCTaGGAAGCACATAGGAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: LSGLCPLPPHNSAVSPKPPCHWV*EAHRRV Trigger: TACCCTCCTATGTGCTTCCAAGACCCAGTGACAGGG...AGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGAGGCCAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CAA 90 bp | CTCTGGCCTCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGCCAGTCCATCATAGGTaGATGCCCCACCTAACACTA | + |
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Preference number: 5 (lower is better) Translates to: LWPLSTPTTQFCSLPKALPVHHR*MPHLTL Trigger: TAGTGTTAGGTGGGGCATCAACCTATGATGGACTGG...CAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGAGGCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CAA 90 bp | TCTGGCCTCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTGGCTCTGGAAGAGATTCTaGGCCAAGGGAGACAACACA | + |
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Preference number: 5 (lower is better) Translates to: SGLCPLPPHNSAVSPKPWLWKRF*AKGDNT Trigger: TGTGTTGTCTCCCTTGGCCAAGAATCTCTTCCAGAG...CCAAGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGAGGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CAA 90 bp | CTCTCTGGCCTCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTCTCCTCAGGCATCTTaGGCAGCAACACTCCATCAA | + |
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Preference number: 5 (lower is better) Translates to: LSGLCPLPPHNSAVSPKPSPQAS*AATLHQ Trigger: TTGATGGAGTGTTGCTGCCAAAGATGCCTGAGGAGA...AGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGAGGCCAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS CCA 90 bp | GGATCTCCTCAGGCATCTTTGGCAGCAACACTCCATCAAGCACAGTaGGAACAAAGGGATGGCTCTGTCTGGAGTCTCCATGCAAATCCA | + |
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Preference number: 5 (lower is better) Translates to: GSPQASLAATLHQAQ*EQRDGSVWSLHANP Trigger: TGGATTTGCATGGAGACTCCAGACAGAGCCATCCCTTTGTTCCCACTGTGCTTGATGGAGTGTTGCTGCCAAAGATGCCTGAGGAGATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034173.14 ENSMUST00000176282.2 |
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| CDS CCA 90 bp | TGTGGGGGCTCCGGCATCTCTATGTCCACGGGACACAATCACAGATaGTACACCGAATACCACATCCCCAATCAATTCCAGAAGTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: CGGSGISMSTGHNHR*YTEYHIPNQFQKLV Trigger: GACCAACTTCTGGAATTGATTGGGGATGTGGTATTCGGTGTACCATCTGTGATTGTGTCCCGTGGACATAGAGATGCCGGAGCCCCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034173.14 ENSMUST00000176282.2 |
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| CDS-3UTR CAA 90 bp | CAGTCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCTCATTTGATCCAAGAGGGGGCTaGGCAAAGGGGACTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: QSPQSLGHNHLPCKVVSFDPRGG*AKGTPR Trigger: CCTGGGAGTCCCCTTTGCCAAGCCCCCTCTTGGATC...AAATGAGACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS TCA 90 bp | AGTGTGGTCCCCAAGAGCTCTTCCTCTGTCTTCTGGCGAAGGCAGTaGACCATGGCAGCGGAAGTGGTGTTTTTACAACCAGATATGACA | + |
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Preference number: 5 (lower is better) Translates to: SVVPKSSSSVFWRRQ*TMAAEVVFLQPDMT Trigger: TGTCATATCTGGTTGTAAAAACACCACTTCCGCTGCCATGGTTCACTGCCTTCGCCAGAAGACAGAGGAAGAGCTCTTGGGGACCACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034173.14 ENSMUST00000176282.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTGGCCTCTGTCCACTCCCACCACACAATTCTGCAGTCTCCCCAAAGCCTTTAGTTAGGAGGTCATaGACTATTTGCCCTGTCACT | + |
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Preference number: 5 (lower is better) Translates to: LSGLCPLPPHNSAVSPKPLVRRS*TICPVT Trigger: AGTGACAGGGCAAATAGTCAATGACCTCCTAACTAA...AGGCTTTGGGGAGACTGCAGAATTGTGTGGTGGGAGTGGACAGAGGCCAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CAA 90 bp | TTTCAAATTGAGTCCACATGTGCAAATATTCTCTCTCTGGCCTCTGTCCACTCCGGCCTGGTGTTCTTCTaGACCAGGCCTGCAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: FQIESTCANILSLASVHSGLVFF*TRPAVR Trigger: CCTCACTGCAGGCCTGGTCAAGAAGAACACCAGGCC...GGAGTGGACAGAGGCCAGAGAGAGAATATTTGCACATGTGGACTCAATTTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CAA 90 bp | CAGTCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCTCATTTTACTTCCCCAGGACTTaGCCTTGCACGGTGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: QSPQSLGHNHLPCKVVSFYFPRT*PCTVST Trigger: GGTGGACACCGTGCAAGGCAAAGTCCTGGGGAAGTA...AAATGAGACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS CCA 90 bp | ATCTTTGGCAGCAACACTCCATCAAGCACAGTGGGAACAAAGGGATaGCTCTGTCTGGAGTCTCCATGCAAATCCAGCTTAAAAAGATTC | + |
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Preference number: 5 (lower is better) Translates to: IFGSNTPSSTVGTKG*LCLESPCKSSLKRF Trigger: GAATCTTTTTAAGCTGGATTTGCATGGAGACTCCAGACAGAGCCATCCCTTTGTTCCCACTGTGCTTGATGGAGTGTTGCTGCCAAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034173.14 ENSMUST00000176282.2 |
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| CDS-3UTR CAA 90 bp | TTTCAAATTGAGTCCACATGTGCAAATATTCTCTCTCTGGCCTCTGTCCACTCCGAGGTCATTGACTATTaGCCCTGTCACTGGGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: FQIESTCANILSLASVHSEVIDY*PCHWVL Trigger: CAAGACCCAGTGACAGGGCAAATAGTCAATGACCTC...GGAGTGGACAGAGGCCAGAGAGAGAATATTTGCACATGTGGACTCAATTTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS-3UTR CAA 90 bp | CAGTCTCCCCAAAGCCTTGGCCACAATCATCTTCCATGTAAAGTAGTCTCATTTGCAATCTGTCACTCTTaGTCAAGTCAGCTGGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: QSPQSLGHNHLPCKVVSFAICHS*SSQLEC Trigger: ACACTCCAGCTGACTTGACAAAGAGTGACAGATTGC...AAATGAGACTACTTTACATGGAAGATGATTGTGGCCAAGGCTTTGGGGAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS TCA 72 bp | CCATGGGTGGTGAGGATGGATGTCCTGCCCCTGCTGTaGATGCTGCAAGTGACACCAGGATCAGAGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PWVVRMDVLPLL*MLQVTPGSEQR Trigger: TCTCTGCTCTGATCCTGGTGTCACTTGCAGCATTCACAGCAGGGGCAGGACATCCATCCTCACCACCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034173.14 |
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| CDS TCA 72 bp | CCCAAGAGCTCTTCCTCTGTCTTCTGGCGAAGGCAGTaGACCATGGCAGCGGAAGTGGTGTTTTTACAACCA | + |
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Preference number: 6 (lower is better) Translates to: PKSSSSVFWRRQ*TMAAEVVFLQP Trigger: TGGTTGTAAAAACACCACTTCCGCTGCCATGGTTCACTGCCTTCGCCAGAAGACAGAGGAAGAGCTCTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034173.14 ENSMUST00000176282.2 |
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| CDS CAA 72 bp | ACAGCAATTTTCTCAGCCAAAGGCCTGGTGTTCTTCTaGACCAGGCCTGCAGTGAGGGCCACACCACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: TAIFSAKGLVFF*TRPAVRATPLS Trigger: TGAAAGTGGTGTGGCCCTCACTGCAGGCCTGGTCAAGAAGAACACCAGGCCTTTGGCTGAGAAAATTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034173.14 ENSMUST00000176282.2 |
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| CDS CCA 72 bp | TCCGGCATCTCTATGTCCACGGGACACAATCACAGATaGTACACCGAATACCACATCCCCAATCAATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SGISMSTGHNHR*YTEYHIPNQFQ Trigger: CTGGAATTGATTGGGGATGTGGTATTCGGTGTACCATCTGTGATTGTGTCCCGTGGACATAGAGATGCCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034173.14 ENSMUST00000176282.2 |
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| CDS CCA 72 bp | CATGGCCGTCATCTGGTCCAATTTCACATCAGAGGGTaGGTAGTTCATCATAGTTGGCAGAATCCAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: HGRHLVQFHIRG*VVHHSWQNPAK Trigger: TTTGGCTGGATTCTGCCAACTATGATGAACTACCCACCCTCTGATGTGAAATTGGACCAGATGACGGCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034173.14 ENSMUST00000176282.2 |
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| CDS TCA 72 bp | CCATGGCAGCGGAAGTGGTGTTTTTACAACCAGATATaGCAGCAATTTTCTCAGCCAAAGGCCTGGTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PWQRKWCFYNQI*QQFSQPKAWCS Trigger: AGAACACCAGGCCTTTGGCTGAGAAAATTGCTGTCATATCTGGTTGTAAAAACACCACTTCCGCTGCCATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034173.14 ENSMUST00000176282.2 |
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| CDS GCA 72 bp | TTCTCCTTTCTGTTAGTTAGGAGGTCATTGACTATTTaGCCTGTCACTGGGTCTTGGAAGCACATAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: FSFLLVRRSLTI*PVTGSWKHIGG Trigger: CCCTCCTATGTGCTTCCAAGACCCAGTGACAGGGCAAATAGTCAATGACCTCCTAACTAACAGAAAGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034173.14 ENSMUST00000176282.2 |
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| CDS CAA 90 bp | GAAAACTGGAGAGGAATTTTCTCCTTTCTGTTAGTTAGGAGGTCATaGACTATTTGCCCTGTCACTGGGTCTTGGAAGCACATAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: ENWRGIFSFLLVRRS*TICPVTGSWKHIGG Trigger: CCCTCCTATGTGCTTCCAAGACCCAGTGACAGGGCAAATAGTCAATGACCTCCTAACTAACAGAAAGGAGAAAATTCCTCTCCAGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034173.14 ENSMUST00000176282.2 |
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| CDS CAA 72 bp | AGAGGAATTTTCTCCTTTCTGTTAGTTAGGAGGTCATaGACTATTTGCCCTGTCACTGGGTCTTGGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RGIFSFLLVRRS*TICPVTGSWKH Trigger: GTGCTTCCAAGACCCAGTGACAGGGCAAATAGTCAATGACCTCCTAACTAACAGAAAGGAGAAAATTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034173.14 ENSMUST00000176282.2 |
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