Pregenerated sensors for CES1D (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056973

Ensembl transcript IDs: ENSMUST00000034172.8

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATAGGTGGAGGCTCCAGCATCTCTGTGACTTCGAGACACAATCACTaGTGGGACACCAAATACCACATCAGCCATCAAGTCCTGGAACAG	+
Preference number: 5 (lower is better) Translates to: IGGGSSISVTSRHNH*WDTKYHISHQVLEQ Trigger: CTGTTCCAGGACTTGATGGCTGATGTGGTATTTGGTGTCCCATCAGTGATTGTGTCTCGAAGTCACAGAGATGCTGGAGCCTCCACCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034172.8
CDS TCA 90 bp	AGTGAGGTCTCCAGTAGTTCATCCTCTGTCTTCTGGCGCAGGCAATaGACCATAACAGCTGATGTGGTAGTTTTACACCCAGAAAGAGTA	+
Preference number: 5 (lower is better) Translates to: SEVSSSSSSVFWRRQ*TITADVVVLHPERV Trigger: TACTCTTTCTGGGTGTAAAACTACCACATCAGCTGTTATGGTTCATTGCCTGCGCCAGAAGACAGAGGATGAACTACTGGAGACCTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034172.8
CDS TCA 72 bp	GAGCTCAACATGTTCCCTGTGGGATGGCCTCTGGGCTaGCTCCTTGGCCCTGAGCTCAGCCCAAAAACTCAC	+
Preference number: 6 (lower is better) Translates to: ELNMFPVGWPLG*LLGPELSPKTH Trigger: GTGAGTTTTTGGGCTGAGCTCAGGGCCAAGGAGTCAGCCCAGAGGCCATCCCACAGGGAACATGTTGAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034172.8
CDS CAA 90 bp	ACAGGCTGTGTGAATCCTTCCAAATTGACATACTTCCCCAGGACTTaGCCTTTAACAGTGTTCACCACAGGTGGTGAGGATGGGTACCCC	+
Preference number: 6 (lower is better) Translates to: TGCVNPSKLTYFPRT*PLTVFTTGGEDGYP Trigger: GGGGTACCCATCCTCACCACCTGTGGTGAACACTGTTAAAGGCAAAGTCCTGGGGAAGTATGTCAATTTGGAAGGATTCACACAGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034172.8
CDS TCA 72 bp	GGCTCCAGCATCTCTGTGACTTCGAGACACAATCACTaGTGGGACACCAAATACCACATCAGCCATCAAGTC	+
Preference number: 6 (lower is better) Translates to: GSSISVTSRHNH*WDTKYHISHQV Trigger: GACTTGATGGCTGATGTGGTATTTGGTGTCCCATCAGTGATTGTGTCTCGAAGTCACAGAGATGCTGGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034172.8
CDS TCA 72 bp	CTCTGTCTTCTGGCGCAGGCAATGAACCATAACAGCTaGTGTGGTAGTTTTACACCCAGAAAGAGTAGCAAC	+
Preference number: 6 (lower is better) Translates to: LCLLAQAMNHNS*CGSFTPRKSSN Trigger: GTTGCTACTCTTTCTGGGTGTAAAACTACCACATCAGCTGTTATGGTTCATTGCCTGCGCCAGAAGACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034172.8
CDS TCA 72 bp	TCCAGTAGTTCATCCTCTGTCTTCTGGCGCAGGCAATaGACCATAACAGCTGATGTGGTAGTTTTACACCCA	+
Preference number: 6 (lower is better) Translates to: SSSSSSVFWRRQ*TITADVVVLHP Trigger: TGGGTGTAAAACTACCACATCAGCTGTTATGGTTCATTGCCTGCGCCAGAAGACAGAGGATGAACTACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034172.8
CDS CCA 72 bp	AATGGAGATCCAAATACTGAGAAGATCTCATCACCATaGTCTCCTATTACTGCCTTGGGTCTCATGGCCGAT	+
Preference number: 6 (lower is better) Translates to: NGDPNTEKISSP*SPITALGLMAD Trigger: ATCGGCCATGAGACCCAAGGCAGTAATAGGAGACCATGGTGATGAGATCTTCTCAGTATTTGGATCTCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034172.8
CDS CAA 72 bp	GTGAATCCTTCCAAATTGACATACTTCCCCAGGACTTaGCCTTTAACAGTGTTCACCACAGGTGGTGAGGAT	+
Preference number: 6 (lower is better) Translates to: VNPSKLTYFPRT*PLTVFTTGGED Trigger: ATCCTCACCACCTGTGGTGAACACTGTTAAAGGCAAAGTCCTGGGGAAGTATGTCAATTTGGAAGGATTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034172.8