Pregenerated sensors for CES1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078964Ensembl transcript IDs: ENSMUST00000109582.3
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CAAGTGTGCAGTTTCCTCTGTAAGATCCATCTTTGGTaGATAGTCATCCTTTGTGGAATAGTTCCATCTTCG | + |
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Preference number: 3 (lower is better) Translates to: QVCSFLCKIHLW*IVILCGIVPSS Trigger: CGAAGATGGAACTATTCCACAAAGGATGACTATTCACCAAAGATGGATCTTACAGAGGAAACTGCACACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR TCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGACAAGGACAGAGACACTaGCACCTCCTGCTGATGACC | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRQGQRH*HLLLMT Trigger: GGTCATCAGCAGGAGGTGTCAGTGTCTCTGTCCTTG...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR GCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGACAGGATCTCTTCTGGTaGCTTTGGCAGCACCACACC | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRQDLFW*LWQHHT Trigger: GGTGTGGTGCTGCCAAAGGCACCAGAAGAGATCCTG...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGATTCGCAATGTTATCCTaGACCCAGCGTAGTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRFAMLS*TQRSAA Trigger: GGCTGCACTACGCTGGGTCCAGGATAACATTGCGAA...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR TCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGAATTGTCCTTCTTAGCTaGAGCAGCTCCTCCCACCTT | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRIVLLS*SSSSHL Trigger: AAGGTGGGAGGAGCTGCTTCAGCTAAGAAGGACAAT...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR GCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGAGACTCCCAGGAAAACTaGCACAGGGTGTTCAAATCC | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRDSQEN*HRVFKS Trigger: GGATTTGAACACCCTGTGGCAGTTTTCCTGGGAGTC...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR GCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGAGAAAGCCACTTCCTCTaGTTTCAGTCTCTGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRESHFL*FQSLGL Trigger: CAAGCCCAGAGACTGAAAGCAGAGGAAGTGGCTTTC...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGAATCAATCCACCACCATaGATCCACACCATCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRINPPP*IHTITG Trigger: GCCTGTGATGGTGTGGATCCATGGTGGTGGATTGAT...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGACTCTTCTGGTGCCTTTaGCAGCACCACACCATCTAT | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRLFWCL*QHHTIY Trigger: ATAGATGGTGTGGTGCTGCCAAAGGCACCAGAAGAG...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGACTTCTCATCATATTCTaGCCAGTGAGGCAGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRLLIIF*PVRQTL Trigger: GAGGGTCTGCCTCACTGGCCAGAATATGATGAGAAG...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR TCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGATCTCCTTTTTGGTGCTaGGCATATCTGAGAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRSPFWC*AYLRVA Trigger: AGCTACTCTCAGATATGCTCAGCACCAAAAAGGAGA...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR TCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGACTCATACATATAGGTTaGCACTCCAGCATCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRLIHIG*HSSISE Trigger: CTCAGAGATGCTGGAGTGTCAACCTATATGTATGAG...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGACACCATCTATCACAGTaGACATGGAGGTATTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRHHLSQ*TWRYCP Trigger: AGGACAATACCTCCATGTCCACTGTGATAGATGGTG...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR TCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGAACAGTAGCAATCATCTaGGAAAGATCACAGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRTVAII*ERSQAT Trigger: TGTTGCCTGTGATCTTTCTCAGATGATTGCTACTGT...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR GCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGATCACAGGCAATAGACTaGTTTTTGTCAAATCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRSQAID*FLSNRQ Trigger: CTGCCGATTTGACAAAAAGCAGTCTATTGCCTGTGA...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR GCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGAGTACTTCTCAATGACTaGTGGAATCAGACTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRVLLND*WNQTLR Trigger: TCTGAGAGTCTGATTCCAGCAGTCATTGAGAAGTAC...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGATGTGGAAGAGGTTTTTaGCCAGAGGAGATAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRCGRGF*PEEIRQ Trigger: TTGTCTTATCTCCTCTGGCCAAAAACCTCTTCCACA...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGATCAGAAATAGCTCTGTaGAAGAGGTTTTTGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRSEIAL*KRFLAR Trigger: TCTGGCCAAAAACCTCTTCCACAGAGCTATTTCTGA...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CCA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGACTTCTCAATGACTGCTaGAATCAGACTCTCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: QVEIQISPLYKCAVSSVRLLNDC*NQTLRD Trigger: ATCTCTGAGAGTCTGATTCCAGCAGTCATTGAGAAG...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS CCA 90 bp | GACAGTGCTGAAACTCTTCTCAGCCAGGATCTCTTCTGGTGCCTTTaGCAGCACCACACCATCTATCACAGTGGACATGGAGGTATTGTC | + |
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Preference number: 5 (lower is better) Translates to: DSAETLLSQDLFWCL*QHHTIYHSGHGGIV Trigger: GACAATACCTCCATGTCCACTGTGATAGATGGTGTGGTGCTGCCAAAGGCACCAGAAGAGATCCTGGCTGAGAAGAGTTTCAGCACTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS GCA 90 bp | TCATCAATCCACCACCATGGATCCACACCATCACAGGCAATAGACTaGTTTTTGTCAAATCGGCAGGGCTGTAAATATTCAGGTAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: SSIHHHGSTPSQAID*FLSNRQGCKYSGRD Trigger: GTCTCTACCTGAATATTTACAGCCCTGCCGATTTGACAAAAAGCAGTCTATTGCCTGTGATGGTGTGGATCCATGGTGGTGGATTGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS TCA 90 bp | TCTTTTAATAATGGAATCCCAAATACAGAGAAGATTTCATCGCCATaGTCTCCCTCAACCGTCTGGGGTCTCTTGTCAGACACGAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: SFNNGIPNTEKISSP*SPSTVWGLLSDTKL Trigger: AAGCTTCGTGTCTGACAAGAGACCCCAGACGGTTGAGGGAGATCATGGCGATGAAATCTTCTCTGTATTTGGGATTCCATTATTAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CAA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGAGTGAGTGTCCCCATATaGGGCAAAGAGCAAGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: QVEIQISPLYKCAVSSVRVSVPI*GKEQEK Trigger: CTTCTCTTGCTCTTTGCCCAATATGGGGACACTCAC...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CAA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGAGGTATGCTCTCCTTTTaGGTGCTGAGCATATCTGAG | + |
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Preference number: 5 (lower is better) Translates to: QVEIQISPLYKCAVSSVRGMLSF*VLSISE Trigger: CTCAGATATGCTCAGCACCAAAAAGGAGAGCATACC...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CAA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGAAATACCCAGGCGGTATaGAATGGTTACTACCACCAC | + |
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Preference number: 5 (lower is better) Translates to: QVEIQISPLYKCAVSSVRNTQAV*NGYYHH Trigger: GTGGTGGTAGTAACCATTCAATACCGCCTGGGTATT...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CAA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGACTGTGGAAGAGGTTTTaGGCCAGAGGAGATAAGACA | + |
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Preference number: 5 (lower is better) Translates to: QVEIQISPLYKCAVSSVRLWKRF*ARGDKT Trigger: TGTCTTATCTCCTCTGGCCAAAAACCTCTTCCACAG...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CAA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGAACTGAACCATGGCAGTaGATGAGGTGTCATTACACC | + |
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Preference number: 5 (lower is better) Translates to: QVEIQISPLYKCAVSSVRTEPWQ*MRCHYT Trigger: GGTGTAATGACACCTCATCAACTGCCATGGTTCAGT...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS TCA 90 bp | GCAGTTGATGAGGTGTCATTACACCCAGAAACAGTAGCAATCATCTaGGAAAGATCACAGGCAACAAGGTCAAGAGTAATGACTATATTC | + |
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Preference number: 5 (lower is better) Translates to: AVDEVSLHPETVAII*ERSQATRSRVMTIF Trigger: GAATATAGTCATTACTCTTGACCTTGTTGCCTGTGATCTTTCTCAGATGATTGCTACTGTTTCTGGGTGTAATGACACCTCATCAACTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CAA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGATACTGCAACTGCATCTaGAGAGCACATAGGAGGATA | + |
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Preference number: 5 (lower is better) Translates to: QVEIQISPLYKCAVSSVRYCNCI*RAHRRI Trigger: TATCCTCCTATGTGCTCTCAAGATGCAGTTGCAGTA...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS-3UTR CAA 90 bp | CAAGTTGAGATACAAATATCTCCACTGTACAAGTGTGCAGTTTCCTCTGTAAGAGTTTCCTCATTCATTTaGCCTTCAGAGAGCAGATCT | + |
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Preference number: 5 (lower is better) Translates to: QVEIQISPLYKCAVSSVRVSSFI*PSESRS Trigger: AGATCTGCTCTCTGAAGGCAAAATGAATGAGGAAAC...TCTTACAGAGGAAACTGCACACTTGTACAGTGGAGATATTTGTATCTCAACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS CAA 72 bp | TGTCCACTACCGGTGATGAGGGTGAGTGTCCCCATATaGGGCAAAGAGCAAGAGAAGCCCAGACCAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: CPLPVMRVSVPI*GKEQEKPRPEH Trigger: ATGCTCTGGTCTGGGCTTCTCTTGCTCTTTGCCCAATATGGGGACACTCACCCTCATCACCGGTAGTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS CAA 90 bp | GCCTTTGGCAGCACCACACCATCTATCACAGTGGACATGGAGGTATaGTCCTTCTTAGCTGAAGCAGCTCCTCCCACCTTAGTGACTTCC | + |
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Preference number: 6 (lower is better) Translates to: AFGSTTPSITVDMEV*SFLAEAAPPTLVTS Trigger: GGAAGTCACTAAGGTGGGAGGAGCTGCTTCAGCTAAGAAGGACAATACCTCCATGTCCACTGTGATAGATGGTGTGGTGCTGCCAAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS CCA 72 bp | GACAGTGCTGAAACTCTTCTCAGCCAGGATCTCTTCTaGTGCCTTTGGCAGCACCACACCATCTATCACAGT | + |
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Preference number: 6 (lower is better) Translates to: DSAETLLSQDLF*CLWQHHTIYHS Trigger: ACTGTGATAGATGGTGTGGTGCTGCCAAAGGCACCAGAAGAGATCCTGGCTGAGAAGAGTTTCAGCACTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS CCA 72 bp | GCTGGAATCAGACTCTCAGAGATGTTAAGGTCAGAGTaGAACCTCCTCAAGAGAAGACTGGCCGTTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: AGIRLSEMLRSE*NLLKRRLAVSS Trigger: TGAGGAAACGGCCAGTCTTCTCTTGAGGAGGTTCCACTCTGACCTTAACATCTCTGAGAGTCTGATTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS CAA 72 bp | AGCACCACACCATCTATCACAGTGGACATGGAGGTATaGTCCTTCTTAGCTGAAGCAGCTCCTCCCACCTTA | + |
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Preference number: 6 (lower is better) Translates to: STTPSITVDMEV*SFLAEAAPPTL Trigger: TAAGGTGGGAGGAGCTGCTTCAGCTAAGAAGGACAATACCTCCATGTCCACTGTGATAGATGGTGTGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS TCA 72 bp | TATCACAGTGGACATGGAGGTATTGTCCTTCTTAGCTaGAGCAGCTCCTCCCACCTTAGTGACTTCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: YHSGHGGIVLLS*SSSSHLSDFQF Trigger: AAACTGGAAGTCACTAAGGTGGGAGGAGCTGCTTCAGCTAAGAAGGACAATACCTCCATGTCCACTGTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS GCA 72 bp | TCCTCAAGAGAAGACTGGCCGTTTCCTCATTCATTTTaGCTTCAGAGAGCAGATCTCCCAACATCGTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SSREDWPFPHSF*LQRADLPTSLE Trigger: TTCCAACGATGTTGGGAGATCTGCTCTCTGAAGGCAAAATGAATGAGGAAACGGCCAGTCTTCTCTTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS CAA 90 bp | ATCCACCACCATGGATCCACACCATCACAGGCAATAGACTGCTTTTaGTCAAATCGGCAGGGCTGTAAATATTCAGGTAGAGACAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: IHHHGSTPSQAIDCF*SNRQGCKYSGRDSL Trigger: AAGACTGTCTCTACCTGAATATTTACAGCCCTGCCGATTTGACAAAAAGCAGTCTATTGCCTGTGATGGTGTGGATCCATGGTGGTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS GCA 72 bp | CACCACCATGGATCCACACCATCACAGGCAATAGACTaGTTTTTGTCAAATCGGCAGGGCTGTAAATATTCA | + |
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Preference number: 6 (lower is better) Translates to: HHHGSTPSQAID*FLSNRQGCKYS Trigger: TGAATATTTACAGCCCTGCCGATTTGACAAAAAGCAGTCTATTGCCTGTGATGGTGTGGATCCATGGTGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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| CDS TCA 72 bp | GAGGTGTCATTACACCCAGAAACAGTAGCAATCATCTaGGAAAGATCACAGGCAACAAGGTCAAGAGTAATG | + |
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Preference number: 6 (lower is better) Translates to: EVSLHPETVAII*ERSQATRSRVM Trigger: CATTACTCTTGACCTTGTTGCCTGTGATCTTTCTCAGATGATTGCTACTGTTTCTGGGTGTAATGACACCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109582.3 |
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