Pregenerated sensors for CERT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021669Ensembl transcript IDs: ENSMUST00000077672.12, ENSMUST00000109444.3, ENSMUST00000179226.8
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCCTCCTGTAGCAACACCAAGTCAAGTTTCTCTACCTCCAATATaGAGTCCTCAACCCCAGGAGGAGCACTCTGCTCCCTCCTTATGC | + |
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Preference number: 1 (lower is better) Translates to: APPVATPSQVSLPPI*SPQPQEEHSAPSLC Trigger: GCATAAGGAGGGAGCAGAGTGCTCCTCCTGGGGTTGAGGACTCCATATTGGAGGTAGAGAAACTTGACTTGGTGTTGCTACAGGAGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR GCA 90 bp | ATATGGAGTCCTCAACCCCAGGAGGAGCACTCTGCTCCCTCCTTATaGTCACTCACACGCAGGGACAAATCCCCACATCACCAGTATTTT | + |
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Preference number: 1 (lower is better) Translates to: IWSPQPQEEHSAPSL*SLTRRDKSPHHQYF Trigger: AAAATACTGGTGATGTGGGGATTTGTCCCTGCGTGTGAGTGAGCATAAGGAGGGAGCAGAGTGCTCCTCCTGGGGTTGAGGACTCCATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR GCA 90 bp | AGGCCTAGCAGGAGATGGCTAGTGCTGGATACCCAGCTTTACGATTaGAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTACG | + |
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Preference number: 1 (lower is better) Translates to: RPSRRWLVLDTQLYD*NVSSWATDKAVDPT Trigger: CGTAGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCACTAGCCATCTCCTGCTAGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR CCA 90 bp | TGGCTAGTGCTGGATACCCAGCTTTACGATTGCAATGTTTCTTCTTaGGCCACAGACAAGGCTGTAGATCCTACGTTCCAGCTTAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: WLVLDTQLYDCNVSS*ATDKAVDPTFQLRG Trigger: TCCTCTAAGCTGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCACTAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR CCA 90 bp | CATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCAGGAGATaGCTAGTGCTGGATACCCAGCTTTACGATTGCAATGTTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: HVFIVTRSARRPSRR*LVLDTQLYDCNVSS Trigger: AGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCACTAGCCATCTCCTGCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR TCA 90 bp | GCTTGTAAACACAATCAAGAGTTTGAAGTGGGCAGTCATCTCAACTaGAGTGAGTACCATTCCTTGCCTCAACTCCATGCTTCCAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: ACKHNQEFEVGSHLN*SEYHSLPQLHASKF Trigger: AAACTTGGAAGCATGGAGTTGAGGCAAGGAATGGTACTCACTTCAGTTGAGATGACTGCCCACTTCAAACTCTTGATTGTGTTTACAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR-3UTR CCA 90 bp | CATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCAGGAGATGGCTAGTGCTCCTTTCTCCAACATaGAACGTCACGCAGCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: HVFIVTRSARRPSRRWLVLLSPT*NVTQPC Trigger: GCAAGGCTGCGTGACGTTCCATGTTGGAGAAAGGAG...CACTAGCCATCTCCTGCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR-3UTR CCA 90 bp | CGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTACGTTCCACTCCTTTCTCCAACATaGAACGTCACGCAGCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: RLQCFFLGHRQGCRSYVPLLSPT*NVTQPC Trigger: GCAAGGCTGCGTGACGTTCCATGTTGGAGAAAGGAG...TGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR CAA 90 bp | ACACTGATATTGGATAGGTGTATAGGTAGTCATGGAAACGGACAGTaGAGAGCCATGCCTCCTGTACCTCACTTGGCCTCCACACATCTC | + |
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Preference number: 2 (lower is better) Translates to: TLILDRCIGSHGNGQ*RAMPPVPHLASTHL Trigger: GAGATGTGTGGAGGCCAAGTGAGGTACAGGAGGCATGGCTCTCAACTGTCCGTTTCCATGACTACCTATACACCTATCCAATATCAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR-3UTR GCA 90 bp | CATGCCTCCTGTACCTCACTTGGCCTCCACACATCTCTCTTAGTCAGGTTCCTCCATGACATGACTCTCTaGTTTACAAAAGGGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HASCTSLGLHTSLLVRFLHDMTL*FTKGSE Trigger: CTCAGACCCTTTTGTAAAGCAGAGAGTCATGTCATG...GAGGAACCTGACTAAGAGAGATGTGTGGAGGCCAAGTGAGGTACAGGAGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR CAA 90 bp | ACAGACACAGACTGTAGGCCTGTAAAAAGAAGCCCATCTGAGTATTaGGTGCACAGAGAGCACATGCCTCAGGTGCGTTCAACTTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: TDTDCRPVKRSPSEY*VHREHMPQVRSTFV Trigger: CACAAAAGTTGAACGCACCTGAGGCATGTGCTCTCTGTGCACCAAATACTCAGATGGGCTTCTTTTTACAGGCCTACAGTCTGTGTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGTGCACAAAACCTGATACAACTGAGGATCTTAGGCTGGACCATGGTAAAAGGCCTAGCAGGAGATaGCTAGTGCTGGATACCCAG | + |
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Preference number: 2 (lower is better) Translates to: LLCTKPDTTEDLRLDHGKRPSRR*LVLDTQ Trigger: CTGGGTATCCAGCACTAGCCATCTCCTGCTAGGCCT...TTTACCATGGTCCAGCCTAAGATCCTCAGTTGTATCAGGTTTTGTGCACAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAGGCCTGTAAAAAGAAGCCCATCTGAGTATTTGGTGCACAGAGAGCACATGTGCAATGTTTCTTCTTaGGCCACAGACAAGGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: CRPVKRSPSEYLVHREHMCNVSS*ATDKAV Trigger: TACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCA...CATGTGCTCTCTGTGCACCAAATACTCAGATGGGCTTCTTTTTACAGGCCTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCCTCCTGTACCTCACTTGGCCTCCACACATCTCTCTTAGTCAGGTTCCTCCTCCATTTCGATGTATaGAATATATACAGGTCATGT | + |
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Preference number: 2 (lower is better) Translates to: HASCTSLGLHTSLLVRFLLHFDV*NIYRSC Trigger: ACATGACCTGTATATATTCCATACATCGAAATGGAG...GAGGAACCTGACTAAGAGAGATGTGTGGAGGCCAAGTGAGGTACAGGAGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR-3UTR GCA 90 bp | ATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCACCCAGCTTTACGATTaGAATGTTTCTTCTTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: IHVILHVFIVTRSARRPSTQLYD*NVSSWA Trigger: GGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGT...GCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCTGCAATGTTTCTTCTTaGGCCACAGACAAGGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: IHVILHVFIVTRSARRPSCNVSS*ATDKAV Trigger: TACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCA...GCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR-3UTR GCA 90 bp | CATATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTACCCAGCTTTACGATTaGAATGTTTCTTCTTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: HIHVILHVFIVTRSARRPTQLYD*NVSSWA Trigger: GGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGT...AGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGAAGTGGGCAGTCATCTCAACTGAAGTGAGTACCATTCCTTGCCTCAACAAAATCACAGGTTATTaGCAGTCCTCAGTTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: SLKWAVISTEVSTIPCLNKITGY*QSSVMK Trigger: CTTCATAACTGAGGACTGTCAATAACCTGTGATTTT...GTTGAGGCAAGGAATGGTACTCACTTCAGTTGAGATGACTGCCCACTTCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR-3UTR CCA 90 bp | CCATGCTTCCAAGTTTTTCATAGAGGACTACAACTAAATCAGGTATTTTACATGCTCCTTTCTCCAACATaGAACGTCACGCAGCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: PCFQVFHRGLQLNQVFYMLLSPT*NVTQPC Trigger: GCAAGGCTGCGTGACGTTCCATGTTGGAGAAAGGAG...CATGTAAAATACCTGATTTAGTTGTAGTCCTCTATGAAAAACTTGGAAGCATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR CAA 90 bp | TCTGAATATTATAACGTCGCCAGTGCTCCTCCTAACTTTGACTGTTaGAATACTTTCAGTATTTCTGAACTCAATTCTAAATCTGACTGG | + |
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Preference number: 2 (lower is better) Translates to: SEYYNVASAPPNFDC*NTFSISELNSKSDW Trigger: CCAGTCAGATTTAGAATTGAGTTCAGAAATACTGAAAGTATTCAAACAGTCAAAGTTAGGAGGAGCACTGGCGACGTTATAATATTCAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTATATAAAGTACTCTATACCCATAAGAGATGTACAGTTGTCTCTGACTGGAAAAGTCAAAAACTTCTaGACACAGACACAGACTGTA | + |
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Preference number: 2 (lower is better) Translates to: LYIKYSIPIRDVQLSLTGKVKNF*TQTQTV Trigger: TACAGTCTGTGTCTGTGTCCAGAAGTTTTTGACTTT...TCCAGTCAGAGACAACTGTACATCTCTTATGGGTATAGAGTACTTTATATACAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR GCA 72 bp | CCTCAACCCCAGGAGGAGCACTCTGCTCCCTCCTTATaGTCACTCACACGCAGGGACAAATCCCCACATCAC | + |
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Preference number: 3 (lower is better) Translates to: PQPQEEHSAPSL*SLTRRDKSPHH Trigger: GTGATGTGGGGATTTGTCCCTGCGTGTGAGTGAGCATAAGGAGGGAGCAGAGTGCTCCTCCTGGGGTTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR GCA 72 bp | TCCAATATGGAGTCCTCAACCCCAGGAGGAGCACTCTaGTCCCTCCTTATGCTCACTCACACGCAGGGACAA | + |
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Preference number: 3 (lower is better) Translates to: SNMESSTPGGAL*SLLMLTHTQGQ Trigger: TTGTCCCTGCGTGTGAGTGAGCATAAGGAGGGAGCAGAGTGCTCCTCCTGGGGTTGAGGACTCCATATTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR CCA 72 bp | GTAGCAACACCAAGTCAAGTTTCTCTACCTCCAATATaGAGTCCTCAACCCCAGGAGGAGCACTCTGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: VATPSQVSLPPI*SPQPQEEHSAP Trigger: GGGAGCAGAGTGCTCCTCCTGGGGTTGAGGACTCCATATTGGAGGTAGAGAAACTTGACTTGGTGTTGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR GCA 72 bp | AGGAGATGGCTAGTGCTGGATACCCAGCTTTACGATTaGAATGTTTCTTCTTGGGCCACAGACAAGGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: RRWLVLDTQLYD*NVSSWATDKAV Trigger: TACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCACTAGCCATCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR-3UTR CAA 90 bp | CGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTACGTTCCAGAACGTCACGCAGCCTaGCTTCAGTCACTGTTAATA | + |
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Preference number: 3 (lower is better) Translates to: RLQCFFLGHRQGCRSYVPERHAA*LQSLLI Trigger: TATTAACAGTGACTGAAGCAAGGCTGCGTGACGTTC...TGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR-3UTR CAA 90 bp | CATGCCTCCTGTACCTCACTTGGCCTCCACACATCTCTCTTAGTCAGGTTCCTCTTAAGTTATCACACCTaGCATTCATCTTTAGACTCC | + |
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Preference number: 3 (lower is better) Translates to: HASCTSLGLHTSLLVRFLLSYHT*HSSLDS Trigger: GGAGTCTAAAGATGAATGCAAGGTGTGATAACTTAA...GAGGAACCTGACTAAGAGAGATGTGTGGAGGCCAAGTGAGGTACAGGAGGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR-3UTR CAA 90 bp | ATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCGAACGTCACGCAGCCTaGCTTCAGTCACTGTTAATA | + |
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Preference number: 3 (lower is better) Translates to: IHVILHVFIVTRSARRPSERHAA*LQSLLI Trigger: TATTAACAGTGACTGAAGCAAGGCTGCGTGACGTTC...GCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR TCA 72 bp | CACAATCAAGAGTTTGAAGTGGGCAGTCATCTCAACTaGAGTGAGTACCATTCCTTGCCTCAACTCCATGCT | + |
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Preference number: 3 (lower is better) Translates to: HNQEFEVGSHLN*SEYHSLPQLHA Trigger: AGCATGGAGTTGAGGCAAGGAATGGTACTCACTTCAGTTGAGATGACTGCCCACTTCAAACTCTTGATTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR-3UTR CAA 90 bp | ATAAATACATCTGCTTGTAAACACAATCAAGAGTTTGAAGTGGGCAGTCATCTCCAAAATCACAGGTTATaGACAGTCCTCAGTTATGAA | + |
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Preference number: 3 (lower is better) Translates to: INTSACKHNQEFEVGSHLQNHRL*TVLSYE Trigger: TTCATAACTGAGGACTGTCAATAACCTGTGATTTTG...GAGATGACTGCCCACTTCAAACTCTTGATTGTGTTTACAAGCAGATGTATTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR TCA 72 bp | ATAACGTCGCCAGTGCTCCTCCTAACTTTGACTGTTTaGATACTTTCAGTATTTCTGAACTCAATTCTAAAT | + |
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Preference number: 3 (lower is better) Translates to: ITSPVLLLTLTV*ILSVFLNSILN Trigger: ATTTAGAATTGAGTTCAGAAATACTGAAAGTATTCAAACAGTCAAAGTTAGGAGGAGCACTGGCGACGTTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| CDS-3UTR TCA 90 bp | TGTAGGCCTGTAAAAAGAAGCCCATCTGAGTATTTGGTGCACAGAGAGCACATGAGTTTGTCCACTTGCTaGGGACCCCGCAGCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: CRPVKRSPSEYLVHREHMSLSTC*GPRSAP Trigger: TGGAGCGCTGCGGGGTCCTCAGCAAGTGGACAAACT...CATGTGCTCTCTGTGCACCAAATACTCAGATGGGCTTCTTTTTACAGGCCTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR TCA 90 bp | AGTATTTGGTGCACAGAGAGCACATGCCTCAGGTGCGTTCAACTTTTGTGCTTTAGTTTGTCCACTTGCTaGGGACCCCGCAGCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SIWCTESTCLRCVQLLCFSLSTC*GPRSAP Trigger: TGGAGCGCTGCGGGGTCCTCAGCAAGTGGACAAACT...AAAGCACAAAAGTTGAACGCACCTGAGGCATGTGCTCTCTGTGCACCAAATACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR TCA 90 bp | ATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCAGTTTGTCCACTTGCTaGGGACCCCGCAGCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IHVILHVFIVTRSARRPSSLSTC*GPRSAP Trigger: TGGAGCGCTGCGGGGTCCTCAGCAAGTGGACAAACT...GCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR CAA 72 bp | TTGGATAGGTGTATAGGTAGTCATGGAAACGGACAGTaGAGAGCCATGCCTCCTGTACCTCACTTGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LDRCIGSHGNGQ*RAMPPVPHLAS Trigger: GGAGGCCAAGTGAGGTACAGGAGGCATGGCTCTCAACTGTCCGTTTCCATGACTACCTATACACCTATCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| 3UTR CAA 72 bp | CAGGAGATGGCTAGTGCTGGATACCCAGCTTTACGATaGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QEMASAGYPALR*QCFFLGHRQGC Trigger: ACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCACTAGCCATCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR CAA 72 bp | GACTGTAGGCCTGTAAAAAGAAGCCCATCTGAGTATTaGGTGCACAGAGAGCACATGCCTCAGGTGCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: DCRPVKRSPSEY*VHREHMPQVRS Trigger: TGAACGCACCTGAGGCATGTGCTCTCTGTGCACCAAATACTCAGATGGGCTTCTTTTTACAGGCCTACAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR TCA 90 bp | ACCCAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATTGGGAGCTGAATCTGTaGACATCGTCAGAGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: TQLYDCNVSSWATDKAVDWELNL*TSSEAL Trigger: CAGTGCCTCTGACGATGTTCACAGATTCAGCTCCCA...ATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077672.12 |
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| CDS-3UTR CCA 90 bp | TGGCTAGTGCTGGATACCCAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACATCTGAAGCTCATCCTTaGAGACAGCGTCAGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: WLVLDTQLYDCNVSSWATSEAHP*RQRQHR Trigger: TCTGTGCTGACGCTGTCTCCAAGGATGAGCTTCAGA...TGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCACTAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CCA 90 bp | TGCTGGATACCCAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGTCTGAAGCTCATCCTTaGAGACAGCGTCAGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: CWIPSFTIAMFLLGPQTRSEAHP*RQRQHR Trigger: TCTGTGCTGACGCTGTCTCCAAGGATGAGCTTCAGA...CCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CCA 90 bp | ACCCAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATTCTCTGCTTATCTCCTaGTCTCCCTCTGGTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TQLYDCNVSSWATDKAVDSLLIS*SPSGGL Trigger: AAGCCCACCAGAGGGAGACCAGGAGATAAGCAGAGA...ATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR TCA 90 bp | TCTTGGGCCACAGACAAGGCTGTAGATCCTACGTTCCAGCTTAGAGGATTCTTTACGACTTTATCCCTCTaGAGCTCATCCTTGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: SWATDKAVDPTFQLRGFFTTLSL*SSSLET Trigger: TGTCTCCAAGGATGAGCTTCAGAGGGATAAAGTCGT...AAAGAATCCTCTAAGCTGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR TCA 90 bp | CGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTACGTTCCAACGACTTTATCCCTCTaGAGCTCATCCTTGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: RLQCFFLGHRQGCRSYVPTTLSL*SSSLET Trigger: TGTCTCCAAGGATGAGCTTCAGAGGGATAAAGTCGT...TGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR TCA 90 bp | ACCCAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCTTCAACCTGGGAGCTaGATCTGTGAACATCGTCAG | + |
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Preference number: 4 (lower is better) Translates to: TQLYDCNVSSWATDKAVDLQPGS*ICEHRQ Trigger: CTGACGATGTTCACAGATTCAGCTCCCAGGTTGAAG...ATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077672.12 |
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| CDS-3UTR CCA 90 bp | TGCTGGATACCCAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGTCTTGTGCTGTTCAATaGCGTCTACCCATTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CWIPSFTIAMFLLGPQTRSCAVQ*RLPIAV Trigger: GACAGCAATGGGTAGACGCCATTGAACAGCACAAGA...CCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGGGCCACAGACAAGGCTGTAGATCCTACGTTCCAGCTTAGAGGATTCTTTTCTTGTGCTGTTCAATaGCGTCTACCCATTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SWATDKAVDPTFQLRGFFSCAVQ*RLPIAV Trigger: GACAGCAATGGGTAGACGCCATTGAACAGCACAAGA...AAAGAATCCTCTAAGCTGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTCATGTCTACGCAAGCTaGACTCAGATCCATATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QLYDCNVSSWATDKAVDPHVYAS*TQIHIP Trigger: CGGGATATGGATCTGAGTCCAGCTTGCGTAGACATG...AGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAAGTGGGCAGTCATCTCAACTGAAGTGAGTACCATTCCTTGCCTCAACCATGTCTACGCAAGCTaGACTCAGATCCATATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLKWAVISTEVSTIPCLNHVYAS*TQIHIP Trigger: CGGGATATGGATCTGAGTCCAGCTTGCGTAGACATG...GTTGAGGCAAGGAATGGTACTCACTTCAGTTGAGATGACTGCCCACTTCAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
||
| CDS-3UTR CCA 90 bp | GTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCAGGAGATCTGAAGCTCATCCTTaGAGACAGCGTCAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VILHVFIVTRSARRPSRRSEAHP*RQRQHR Trigger: TCTGTGCTGACGCTGTCTCCAAGGATGAGCTTCAGA...TCTCCTGCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR TCA 90 bp | AGTATTTGGTGCACAGAGAGCACATGCCTCAGGTGCGTTCAACTTTTGTGCTTTACGACTTTATCCCTCTaGAGCTCATCCTTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SIWCTESTCLRCVQLLCFTTLSL*SSSLET Trigger: TGTCTCCAAGGATGAGCTTCAGAGGGATAAAGTCGT...AAAGCACAAAAGTTGAACGCACCTGAGGCATGTGCTCTCTGTGCACCAAATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CCA 90 bp | CATATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTTCTCTGCTTATCTCCTaGTCTCCCTCTGGTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HIHVILHVFIVTRSARRPSLLIS*SPSGGL Trigger: AAGCCCACCAGAGGGAGACCAGGAGATAAGCAGAGA...AGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR TCA 90 bp | CGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTACGTTCCAACACCTTTAACTGCATaGGTAGCTTTCAAAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: RLQCFFLGHRQGCRSYVPTPLTA*VAFKGS Trigger: GGATCCTTTGAAAGCTACTCATGCAGTTAAAGGTGT...TGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGGGCCACAGACAAGGCTGTAGATCCTACGTTCCAGCTTAGAGGATTCTTTTCTTCAACAACCAGTTaGCAATTTGCATCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SWATDKAVDPTFQLRGFFSSTTS*QFASPP Trigger: AGGTGGTGATGCAAATTGGCAACTGGTTGTTGAAGA...AAAGAATCCTCTAAGCTGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR GCA 90 bp | AGTATTTGGTGCACAGAGAGCACATGCCTCAGGTGCGTTCAACTTTTGTGCTTTACAGAATGTTGTCTCTaGTTATCTCCTGGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIWCTESTCLRCVQLLCFTECCL*LSPGLP Trigger: AGGGAGACCAGGAGATAAGCAGAGACAACATTCTGT...AAAGCACAAAAGTTGAACGCACCTGAGGCATGTGCTCTCTGTGCACCAAATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTGATCAATGGAAGACATaGAGGAAGAGCGACTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLYDCNVSSWATDKAVDPDQWKT*RKSDYR Trigger: CCTATAGTCGCTCTTCCTCCATGTCTTCCATTGATC...AGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077672.12 |
||
| CDS-3UTR CCA 90 bp | CCCTCCTTTCTCCAACATGGAACGTCACGCAGCCTTGCTTCAGTCACTGTTAATATTTTCAGTCAAGGCTaGGATCTTTCGAATAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSFLQHGTSRSLASVTVNIFSQG*DLSNSR Trigger: TCTGCTATTCGAAAGATCCCAGCCTTGACTGAAAAT...ATTAACAGTGACTGAAGCAAGGCTGCGTGACGTTCCATGTTGGAGAAAGGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGATACCCAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGGACCTTTTCACTCTGTaGCTGTTCCTCTATTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: CWIPSFTIAMFLLGPQTRDLFTL*LFLYFI Trigger: GATAAAATAGAGGAACAGTCACAGAGTGAAAAGGTC...CCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGTGCACAAAACCTGATACAACTGAGGATCTTAGGCTGGACCATGGTAAACATCGTCAGAGGCACTaGCTAGATCAATGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLCTKPDTTEDLRLDHGKHRQRH*LDQWKT Trigger: TGTCTTCCATTGATCTAGTCAGTGCCTCTGACGATG...TTTACCATGGTCCAGCCTAAGATCCTCAGTTGTATCAGGTTTTGTGCACAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077672.12 |
||
| CDS-3UTR TCA 90 bp | GTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCAGGAGAACACCTTTAACTGCATaGGTAGCTTTCAAAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VILHVFIVTRSARRPSRRTPLTA*VAFKGS Trigger: GGATCCTTTGAAAGCTACTCATGCAGTTAAAGGTGT...TCTCCTGCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTATTTGGTGCACAGAGAGCACATGCCTCAGGTGCGTTCAACTTTTGTGTTCTCACGTAAACTGTaGCCTTTCTTGAAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEYLVHREHMPQVRSTFVFSRKL*PFLKEE Trigger: CTCTTCTTTCAAGAAAGGCCACAGTTTACGTGAGAA...CACAAAAGTTGAACGCACCTGAGGCATGTGCTCTCTGTGCACCAAATACTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTATTTGGTGCACAGAGAGCACATGCCTCAGGTGCGTTCAACTTTTGTGATTTTCAGTCAAGGCTaGGATCTTTCGAATAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEYLVHREHMPQVRSTFVIFSQG*DLSNSR Trigger: TCTGCTATTCGAAAGATCCCAGCCTTGACTGAAAAT...CACAAAAGTTGAACGCACCTGAGGCATGTGCTCTCTGTGCACCAAATACTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR TCA 90 bp | CGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTACGTTCCACACTATCATTTACACTaGTATCAAACCGGCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLQCFFLGHRQGCRSYVPHYHLH*YQTGIH Trigger: ATGAATGCCGGTTTGATATCAGTGTAAATGATAGTG...TGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAAGTGGGCAGTCATCTCAACTGAAGTGAGTACCATTCCTTGCCTCAACGACCTTTTCACTCTGTaGCTGTTCCTCTATTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: SLKWAVISTEVSTIPCLNDLFTL*LFLYFI Trigger: GATAAAATAGAGGAACAGTCACAGAGTGAAAAGGTC...GTTGAGGCAAGGAATGGTACTCACTTCAGTTGAGATGACTGCCCACTTCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTAGTGCTGGATACCCAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGCGTTTGATAAACGATaGTTGCATTATCAGCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: WLVLDTQLYDCNVSSWATAFDKR*LHYQLM Trigger: CATTAGCTGATAATGCAATCATCGTTTATCAAACGC...TGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCACTAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR GCA 90 bp | CATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCAGGAGATGGCTAGTGTTACCATTGGTATTGTaGAAAAAGTCTCCATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HVFIVTRSARRPSRRWLVLPLVL*KKSPSE Trigger: TTCTGATGGAGACTTTTTGCACAATACCAATGGTAA...CACTAGCCATCTCCTGCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR GCA 90 bp | ATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCTCTTCAACAACCAGTTaGCAATTTGCATCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: IHVILHVFIVTRSARRPSSSTTS*QFASPP Trigger: AGGTGGTGATGCAAATTGGCAACTGGTTGTTGAAGA...GCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGATACCCAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGTGTAACACCTTTAACTaGATGAGTAGCTTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CWIPSFTIAMFLLGPQTRCNTFN*MSSFQR Trigger: CCTTTGAAAGCTACTCATGCAGTTAAAGGTGTTACA...CCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGGCCTGTAAAAAGAAGCCCATCTGAGTATTTGGTGCACAGAGAGCACATGTTCTCACGTAAACTGTaGCCTTTCTTGAAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CRPVKRSPSEYLVHREHMFSRKL*PFLKEE Trigger: CTCTTCTTTCAAGAAAGGCCACAGTTTACGTGAGAA...CATGTGCTCTCTGTGCACCAAATACTCAGATGGGCTTCTTTTTACAGGCCTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGGGCCACAGACAAGGCTGTAGATCCTACGTTCCAGCTTAGAGGATTCTTTATTAATCAGACTGTTTaGACCTTCTTCATAATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SWATDKAVDPTFQLRGFFINQTV*TFFIIR Trigger: CCGGATTATGAAGAAGGTCCAAACAGTCTGATTAAT...AAAGAATCCTCTAAGCTGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR TCA 90 bp | GCCACAGACAAGGCTGTAGATCCTACGTTCCAGCTTAGAGGATTCTTTTTATTTACACCTTTAACTGCATaGGTAGCTTTCAAAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ATDKAVDPTFQLRGFFLFTPLTA*VAFKGS Trigger: GGATCCTTTGAAAGCTACTCATGCAGTTAAAGGTGT...AAATAAAAAGAATCCTCTAAGCTGGAACGTAGGATCTACAGCCTTGTCTGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR GCA 90 bp | TCTGAGTATTTGGTGCACAGAGAGCACATGCCTCAGGTGCGTTCAACTTTTGTGTTACCATTGGTATTGTaGAAAAAGTCTCCATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SEYLVHREHMPQVRSTFVLPLVL*KKSPSE Trigger: TTCTGATGGAGACTTTTTGCACAATACCAATGGTAA...CACAAAAGTTGAACGCACCTGAGGCATGTGCTCTCTGTGCACCAAATACTCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR GCA 90 bp | CATATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTTCTTCAACAACCAGTTaGCAATTTGCATCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HIHVILHVFIVTRSARRPSSTTS*QFASPP Trigger: AGGTGGTGATGCAAATTGGCAACTGGTTGTTGAAGA...AGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTTGTAACACCTTTAACTaGATGAGTAGCTTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLYDCNVSSWATDKAVDPCNTFN*MSSFQR Trigger: CCTTTGAAAGCTACTCATGCAGTTAAAGGTGTTACA...AGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAAGTGGGCAGTCATCTCAACTGAAGTGAGTACCATTCCTTGCCTCAACTGTAACACCTTTAACTaGATGAGTAGCTTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLKWAVISTEVSTIPCLNCNTFN*MSSFQR Trigger: CCTTTGAAAGCTACTCATGCAGTTAAAGGTGTTACA...GTTGAGGCAAGGAATGGTACTCACTTCAGTTGAGATGACTGCCCACTTCAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
||
| CDS-3UTR CCA 90 bp | ATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCTTCTCACGTAAACTGTaGCCTTTCTTGAAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHVILHVFIVTRSARRPSFSRKL*PFLKEE Trigger: CTCTTCTTTCAAGAAAGGCCACAGTTTACGTGAGAA...GCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CCA 90 bp | ATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCATTTTCAGTCAAGGCTaGGATCTTTCGAATAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IHVILHVFIVTRSARRPSIFSQG*DLSNSR Trigger: TCTGCTATTCGAAAGATCCCAGCCTTGACTGAAAAT...GCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CCA 90 bp | CCATGCTTCCAAGTTTTTCATAGAGGACTACAACTAAATCAGGTATTTTACATGTCTCTGCTTATCTCCTaGTCTCCCTCTGGTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PCFQVFHRGLQLNQVFYMSLLIS*SPSGGL Trigger: AAGCCCACCAGAGGGAGACCAGGAGATAAGCAGAGA...CATGTAAAATACCTGATTTAGTTGTAGTCCTCTATGAAAAACTTGGAAGCATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
||
| CDS-3UTR CCA 90 bp | ATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCATTAATCAGACTGTTTaGACCTTCTTCATAATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IHVILHVFIVTRSARRPSINQTV*TFFIIR Trigger: CCGGATTATGAAGAAGGTCCAAACAGTCTGATTAAT...GCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR TCA 90 bp | GCCACAGACAAGGCTGTAGATCCTACGTTCCAGCTTAGAGGATTCTTTTTATTTCACTATCATTTACACTaGTATCAAACCGGCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ATDKAVDPTFQLRGFFLFHYHLH*YQTGIH Trigger: ATGAATGCCGGTTTGATATCAGTGTAAATGATAGTG...AAATAAAAAGAATCCTCTAAGCTGGAACGTAGGATCTACAGCCTTGTCTGTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR TCA 90 bp | GCCACAGACAAGGCTGTAGATCCTACGTTCCAGCTTAGAGGATTCTTTTTATTTGCGTTTGATAAACGATaGTTGCATTATCAGCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: ATDKAVDPTFQLRGFFLFAFDKR*LHYQLM Trigger: CATTAGCTGATAATGCAATCATCGTTTATCAAACGC...AAATAAAAAGAATCCTCTAAGCTGGAACGTAGGATCTACAGCCTTGTCTGTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGTGCACAAAACCTGATACAACTGAGGATCTTAGGCTGGACCATGGTAAAAGAGGAGCACTATCATaGTCCACAGAAAAATTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LLCTKPDTTEDLRLDHGKRGALS*STEKLQ Trigger: TTGTAATTTTTCTGTGGATCATGATAGTGCTCCTCT...TTTACCATGGTCCAGCCTAAGATCCTCAGTTGTATCAGGTTTTGTGCACAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR TCA 90 bp | CATATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGAGGAGCACTATCATaGTCCACAGAAAAATTACAA | + |
|
Preference number: 4 (lower is better) Translates to: HIHVILHVFIVTRSARRPRGALS*STEKLQ Trigger: TTGTAATTTTTCTGTGGATCATGATAGTGCTCCTCT...AGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGATATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR GCA 90 bp | CTGTATATAAAGTACTCTATACCCATAAGAGATGTACAGTTGTCTCTGACTGGAACAGAATGTTGTCTCTaGTTATCTCCTGGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LYIKYSIPIRDVQLSLTGTECCL*LSPGLP Trigger: AGGGAGACCAGGAGATAAGCAGAGACAACATTCTGT...TCCAGTCAGAGACAACTGTACATCTCTTATGGGTATAGAGTACTTTATATACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CCA 90 bp | CCATGCTTCCAAGTTTTTCATAGAGGACTACAACTAAATCAGGTATTTTACATGTCTTGTGCTGTTCAATaGCGTCTACCCATTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PCFQVFHRGLQLNQVFYMSCAVQ*RLPIAV Trigger: GACAGCAATGGGTAGACGCCATTGAACAGCACAAGA...CATGTAAAATACCTGATTTAGTTGTAGTCCTCTATGAAAAACTTGGAAGCATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTGCACAAAACCTGATACAACTGAGGATCTTAGGCTGGACCATGGTAAAATTAATCAGACTGTTTaGACCTTCTTCATAATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLCTKPDTTEDLRLDHGKINQTV*TFFIIR Trigger: CCGGATTATGAAGAAGGTCCAAACAGTCTGATTAAT...TTTACCATGGTCCAGCCTAAGATCCTCAGTTGTATCAGGTTTTGTGCACAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR GCA 90 bp | CATATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTTTACCATTGGTATTGTaGAAAAAGTCTCCATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HIHVILHVFIVTRSARRPLPLVL*KKSPSE Trigger: TTCTGATGGAGACTTTTTGCACAATACCAATGGTAA...AGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGATATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR GCA 90 bp | CATATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTGATTCCAGCAGTAGTTaGTTTAAAAGTTATTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HIHVILHVFIVTRSARRPDSSSS*FKSYCF Trigger: GAAGCAATAACTTTTAAAGCAACTACTGCTGGAATC...AGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR GCA 90 bp | GATGTAAACTGGTATGATAATCTGTTCCTTGCCTTCCTAGCACTACCACCACATGATTCCAGCAGTAGTTaGTTTAAAAGTTATTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DVNWYDNLFLAFLALPPHDSSSS*FKSYCF Trigger: GAAGCAATAACTTTTAAAGCAACTACTGCTGGAATC...ATGTGGTGGTAGTGCTAGGAAGGCAAGGAACAGATTATCATACCAGTTTACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
||
| CDS-3UTR TCA 90 bp | CTGTATATAAAGTACTCTATACCCATAAGAGATGTACAGTTGTCTCTGACTGGAGACCTTTTCACTCTGTaGCTGTTCCTCTATTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LYIKYSIPIRDVQLSLTGDLFTL*LFLYFI Trigger: GATAAAATAGAGGAACAGTCACAGAGTGAAAAGGTC...TCCAGTCAGAGACAACTGTACATCTCTTATGGGTATAGAGTACTTTATATACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR CAA 72 bp | TATATAAAGTACTCTATACCCATAAGAGATGTACAGTaGTCTCTGACTGGAGGCAGGCAGAACCAATTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: YIKYSIPIRDVQ*SLTGGRQNQFK Trigger: TTTAAATTGGTTCTGCCTGCCTCCAGTCAGAGACAACTGTACATCTCTTATGGGTATAGAGTACTTTATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR CAA 72 bp | GTGATCAGACTAATCCCATCATTAAGTTATCACACCTaGCATTCATCTTTAGACTCCATTTCGATGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: VIRLIPSLSYHT*HSSLDSISMYG Trigger: TCCATACATCGAAATGGAGTCTAAAGATGAATGCAAGGTGTGATAACTTAATGATGGGATTAGTCTGATCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| CDS-3UTR TCA 90 bp | CTGTATATAAAGTACTCTATACCCATAAGAGATGTACAGTTGTCTCTGACTGGAGCGTTTGATAAACGATaGTTGCATTATCAGCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LYIKYSIPIRDVQLSLTGAFDKR*LHYQLM Trigger: CATTAGCTGATAATGCAATCATCGTTTATCAAACGC...TCCAGTCAGAGACAACTGTACATCTCTTATGGGTATAGAGTACTTTATATACAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| 3UTR CAA 72 bp | CAACTAAAGACAGTTTTCAGTTTGAATACTGTGAAATaGTACTGCTCTGCTGAAATTTATGATCAAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLKTVFSLNTVK*YCSAEIYDQEA Trigger: TGCCTCTTGATCATAAATTTCAGCAGAGCAGTACAATTTCACAGTATTCAAACTGAAAACTGTCTTTAGTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
||
| CDS CCA 90 bp | AGCTCATCCTTGGAGACAGCGTCAGCACAGACATCAAAGTACTTCTaGAGAGTATCAACCTGCCGGCACAGGATGTCCCGAAATGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLETASAQTSKYF*RVSTCRHRMSRNVS Trigger: GGAGACATTTCGGGACATCCTGTGCCGGCAGGTTGATACTCTCCAGAAGTACTTTGATGTCTGTGCTGACGCTGTCTCCAAGGATGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS CCA 90 bp | TCGCTCCAGACACCAGTGACACCATTGAGCCATGTCTACGCAAGCTaGACTCAGATCCATATCCCGATTCAGTCTTGTGCTGTTCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SLQTPVTPLSHVYAS*TQIHIPIQSCAVQW Trigger: CCATTGAACAGCACAAGACTGAATCGGGATATGGATCTGAGTCCAGCTTGCGTAGACATGGCTCAATGGTGTCACTGGTGTCTGGAGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | TCTGAGTATTTGGTGCACAGAGAGCACATGCCTCAGGTGCGTTCAACTTTTGTGGGCGTGATCACAGCCTaGCTAAGACAGATGGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SEYLVHREHMPQVRSTFVGVITA*LRQMDP Trigger: GGGATCCATCTGTCTTAGCAAGGCTGTGATCACGCC...CACAAAAGTTGAACGCACCTGAGGCATGTGCTCTCTGTGCACCAAATACTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS GCA 90 bp | ACAGCGTCAGCACAGACATCAAAGTACTTCTGGAGAGTATCAACCTaGCGGCACAGGATGTCCCGAAATGTCTCCATTTCAGCCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TASAQTSKYFWRVST*RHRMSRNVSISASF Trigger: GAAACTGGCTGAAATGGAGACATTTCGGGACATCCTGTGCCGGCAGGTTGATACTCTCCAGAAGTACTTTGATGTCTGTGCTGACGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CAA 90 bp | ATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCGGCGTGATCACAGCCTaGCTAAGACAGATGGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: IHVILHVFIVTRSARRPSGVITA*LRQMDP Trigger: GGGATCCATCTGTCTTAGCAAGGCTGTGATCACGCC...GCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | GTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCAGGAGACCTATCGTGTCTTTTTaGCCAGCTCTCTTCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VILHVFIVTRSARRPSRRPIVSF*PALFPF Trigger: AAACGGGAAGAGAGCTGGCAAAAAAGACACGATAGG...TCTCCTGCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | CAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTCCTATCGTGTCTTTTTaGCCAGCTCTCTTCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QLYDCNVSSWATDKAVDPPIVSF*PALFPF Trigger: AAACGGGAAGAGAGCTGGCAAAAAAGACACGATAGG...AGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGGCCTGTAAAAAGAAGCCCATCTGAGTATTTGGTGCACAGAGAGCACATGTCTTCCATCACATTCTaGTACGCTTCCTCCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: CRPVKRSPSEYLVHREHMSSITF*YASSTR Trigger: ACGAGTGGAGGAAGCGTACAAGAATGTGATGGAAGA...CATGTGCTCTCTGTGCACCAAATACTCAGATGGGCTTCTTTTTACAGGCCTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTAAACTGTGGCCTTTCTaGAAAGAAGAGGTGGACGTA | + |
|
Preference number: 5 (lower is better) Translates to: QLYDCNVSSWATDKAVDPKLWPF*KEEVDV Trigger: TACGTCCACCTCTTCTTTCAAGAAAGGCCACAGTTT...AGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | CGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTACGTTCCAGTAGTTTCCCAGTCATaGCGAACATCAACATTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RLQCFFLGHRQGCRSYVPVVSQS*RTSTFQ Trigger: TTGGAATGTTGATGTTCGCAATGACTGGGAAACTAC...TGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | TGGCTAGTGCTGGATACCCAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGTAGTTTCCCAGTCATaGCGAACATCAACATTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: WLVLDTQLYDCNVSSWATVVSQS*RTSTFQ Trigger: TTGGAATGTTGATGTTCGCAATGACTGGGAAACTAC...TGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCACTAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | CATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCAGGAGATGGCTAGTGATAGCAATATTGATTTaGGCACGGACACATCGATTG | + |
|
Preference number: 5 (lower is better) Translates to: HVFIVTRSARRPSRRWLVIAILI*ARTHRL Trigger: CAATCGATGTGTCCGTGCCAAAATCAATATTGCTAT...CACTAGCCATCTCCTGCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | AGTATTTGGTGCACAGAGAGCACATGCCTCAGGTGCGTTCAACTTTTGTGCTTTATCTTGCACAGAATGTaGTCTCTGCTTATCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SIWCTESTCLRCVQLLCFILHRM*SLLISW Trigger: CCAGGAGATAAGCAGAGACAACATTCTGTGCAAGAT...AAAGCACAAAAGTTGAACGCACCTGAGGCATGTGCTCTCTGTGCACCAAATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | CAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTATCTTGCACAGAATGTaGTCTCTGCTTATCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLYDCNVSSWATDKAVDPILHRM*SLLISW Trigger: CCAGGAGATAAGCAGAGACAACATTCTGTGCAAGAT...AGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | TGTAGGCCTGTAAAAAGAAGCCCATCTGAGTATTTGGTGCACAGAGAGCACATGATCTTGCACAGAATGTaGTCTCTGCTTATCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CRPVKRSPSEYLVHREHMILHRM*SLLISW Trigger: CCAGGAGATAAGCAGAGACAACATTCTGTGCAAGAT...CATGTGCTCTCTGTGCACCAAATACTCAGATGGGCTTCTTTTTACAGGCCTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS CCA 90 bp | AGCTTCAACAGCATCAAAGAACTCTTCCTCATTAATCAGACTGTTTaGACCTTCTTCATAATCCGGCCCTCCGAAACGGGGTTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFNSIKELFLINQTV*TFFIIRPSETGFLL Trigger: AAGAAGAAACCCCGTTTCGGAGGGCCGGATTATGAAGAAGGTCCAAACAGTCTGATTAATGAGGAAGAGTTCTTTGATGCTGTTGAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | CTTTTGTGCACAAAACCTGATACAACTGAGGATCTTAGGCTGGACCATGGTAAATCTTCCATCACATTCTaGTACGCTTCCTCCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LLCTKPDTTEDLRLDHGKSSITF*YASSTR Trigger: ACGAGTGGAGGAAGCGTACAAGAATGTGATGGAAGA...TTTACCATGGTCCAGCCTAAGATCCTCAGTTGTATCAGGTTTTGTGCACAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | CAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGCTGTAGATCCTGTAGTTTCCCAGTCATaGCGAACATCAACATTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QLYDCNVSSWATDKAVDPVVSQS*RTSTFQ Trigger: TTGGAATGTTGATGTTCGCAATGACTGGGAAACTAC...AGGATCTACAGCCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | CATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCAGGAGATGGCTAGTGTACTCTCTTGTGCGTTaGATAAACGATGATTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: HVFIVTRSARRPSRRWLVYSLVR*INDDCI Trigger: AATGCAATCATCGTTTATCAAACGCACAAGAGAGTA...CACTAGCCATCTCCTGCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | TGCTGGATACCCAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGATAGCAATATTGATTTaGGCACGGACACATCGATTG | + |
|
Preference number: 5 (lower is better) Translates to: CWIPSFTIAMFLLGPQTRIAILI*ARTHRL Trigger: CAATCGATGTGTCCGTGCCAAAATCAATATTGCTAT...CCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS TCA 90 bp | TCTCTGCTTATCTCCTGGTCTCCCTCTGGTGGGCTTACTAAAGTTTaGCAAATCATAGCAATATTGATTTTGGCACGGACACATCGATTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLISWSPSGGLTKV*QIIAILILARTHRL Trigger: CAATCGATGTGTCCGTGCCAAAATCAATATTGCTATGATTTGTCAAACTTTAGTAAGCCCACCAGAGGGAGACCAGGAGATAAGCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | CATATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAAACTGTGGCCTTTCTaGAAAGAAGAGGTGGACGTA | + |
|
Preference number: 5 (lower is better) Translates to: HIHVILHVFIVTRSARRPKLWPF*KEEVDV Trigger: TACGTCCACCTCTTCTTTCAAGAAAGGCCACAGTTT...AGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | TGCTGGATACCCAGCTTTACGATTGCAATGTTTCTTCTTGGGCCACAGACAAGGTACTCTCTTGTGCGTTaGATAAACGATGATTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: CWIPSFTIAMFLLGPQTRYSLVR*INDDCI Trigger: AATGCAATCATCGTTTATCAAACGCACAAGAGAGTA...CCTTGTCTGTGGCCCAAGAAGAAACATTGCAATCGTAAAGCTGGGTATCCAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | TCTTGGGCCACAGACAAGGCTGTAGATCCTACGTTCCAGCTTAGAGGATTCTTTTACTCTCTTGTGCGTTaGATAAACGATGATTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SWATDKAVDPTFQLRGFFYSLVR*INDDCI Trigger: AATGCAATCATCGTTTATCAAACGCACAAGAGAGTA...AAAGAATCCTCTAAGCTGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | AAACAACTGAGACGTCTGAAGATAACCGGCACAATTTCACAAGAGAGCCAGCTCATAGCAATATTGATTTaGGCACGGACACATCGATTG | + |
|
Preference number: 5 (lower is better) Translates to: KQLRRLKITGTISQESQLIAILI*ARTHRL Trigger: CAATCGATGTGTCCGTGCCAAAATCAATATTGCTAT...GAGCTGGCTCTCTTGTGAAATTGTGCCGGTTATCTTCAGACGTCTCAGTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
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| CDS-3UTR CAA 90 bp | TCTTGGGCCACAGACAAGGCTGTAGATCCTACGTTCCAGCTTAGAGGATTCTTTCAAATCATAGCAATATaGATTTTGGCACGGACACAT | + |
|
Preference number: 5 (lower is better) Translates to: SWATDKAVDPTFQLRGFFQIIAI*ILARTH Trigger: ATGTGTCCGTGCCAAAATCAATATTGCTATGATTTG...AAAGAATCCTCTAAGCTGGAACGTAGGATCTACAGCCTTGTCTGTGGCCCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | GTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCAGGAGACATTTCTTCAACCTTTaGTACAAATCTATGCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VILHVFIVTRSARRPSRRHFFNL*YKSMRP Trigger: GGGACGCATAGATTTGTACAAAAGGTTGAAGAAATG...TCTCCTGCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CAA 90 bp | ATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCTTCCTCTATTTTATCTaGTCTGTCAAGAGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IHVILHVFIVTRSARRPSFLYFI*SVKSSF Trigger: GAAGCTGCTCTTGACAGACAAGATAAAATAGAGGAA...GCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | GTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTAGCAGGAGACAAATCATAGCAATATaGATTTTGGCACGGACACAT | + |
|
Preference number: 5 (lower is better) Translates to: VILHVFIVTRSARRPSRRQIIAI*ILARTH Trigger: ATGTGTCCGTGCCAAAATCAATATTGCTATGATTTG...TCTCCTGCTAGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS TCA 90 bp | CTCTCTGAGAAGCGGGCCATACTCTCTTGTGCGTTTGATAAACGATaGTTGCATTATCAGCTAATGTTTCCACCACATGAAAGTTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LSEKRAILSCAFDKR*LHYQLMFPPHESFL Trigger: TAGAAAACTTTCATGTGGTGGAAACATTAGCTGATAATGCAATCATCGTTTATCAAACGCACAAGAGAGTATGGCCCGCTTCTCAGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CAA 90 bp | CATATCCATGTGATTCTACATGTATTTATAGTTACACGCTCAGCGAGGAGGCCTTTCCTCTATTTTATCTaGTCTGTCAAGAGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HIHVILHVFIVTRSARRPFLYFI*SVKSSF Trigger: GAAGCTGCTCTTGACAGACAAGATAAAATAGAGGAA...AGGCCTCCTCGCTGAGCGTGTAACTATAAATACATGTAGAATCACATGGATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGTGCACAAAACCTGATACAACTGAGGATCTTAGGCTGGACCATGGTAAATTCCTCTATTTTATCTaGTCTGTCAAGAGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLCTKPDTTEDLRLDHGKFLYFI*SVKSSF Trigger: GAAGCTGCTCTTGACAGACAAGATAAAATAGAGGAA...TTTACCATGGTCCAGCCTAAGATCCTCAGTTGTATCAGGTTTTGTGCACAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CAA 90 bp | GCCACAGACAAGGCTGTAGATCCTACGTTCCAGCTTAGAGGATTCTTTTTATTTCATTTCTTCAACCTTTaGTACAAATCTATGCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ATDKAVDPTFQLRGFFLFHFFNL*YKSMRP Trigger: GGGACGCATAGATTTGTACAAAAGGTTGAAGAAATG...AAATAAAAAGAATCCTCTAAGCTGGAACGTAGGATCTACAGCCTTGTCTGTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
||
| CDS-3UTR CAA 90 bp | ATAAATACATCTGCTTGTAAACACAATCAAGAGTTTGAAGTGGGCAGTCATCTCAAACTGTGGCCTTTCTaGAAAGAAGAGGTGGACGTA | + |
|
Preference number: 5 (lower is better) Translates to: INTSACKHNQEFEVGSHLKLWPF*KEEVDV Trigger: TACGTCCACCTCTTCTTTCAAGAAAGGCCACAGTTT...GAGATGACTGCCCACTTCAAACTCTTGATTGTGTTTACAAGCAGATGTATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109444.3 |
||
| CDS CCA 90 bp | AAAATTACAAACTATCCAAGTTTCAGGATCATTTTCAGTCAAGGCTaGGATCTTTCGAATAGCAGAAAGATACAGTACGTCTCTCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: KITNYPSFRIIFSQG*DLSNSRKIQYVSLR Trigger: TCTCAGAGAGACGTACTGTATCTTTCTGCTATTCGAAAGATCCCAGCCTTGACTGAAAATGATCCTGAAACTTGGATAGTTTGTAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS-3UTR CAA 90 bp | CTGTATATAAAGTACTCTATACCCATAAGAGATGTACAGTTGTCTCTGACTGGACAAATCATAGCAATATaGATTTTGGCACGGACACAT | + |
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Preference number: 5 (lower is better) Translates to: LYIKYSIPIRDVQLSLTGQIIAI*ILARTH Trigger: ATGTGTCCGTGCCAAAATCAATATTGCTATGATTTG...TCCAGTCAGAGACAACTGTACATCTCTTATGGGTATAGAGTACTTTATATACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS CCA 72 bp | CAGATCCATATCCCGATTCAGTCTTGTGCTGTTCAATaGCGTCTACCCATTGCTGTCTGTGCTCCGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: QIHIPIQSCAVQ*RLPIAVCAPGP Trigger: AGGACCCGGAGCACAGACAGCAATGGGTAGACGCCATTGAACAGCACAAGACTGAATCGGGATATGGATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS CCA 72 bp | TTGGAGACAGCGTCAGCACAGACATCAAAGTACTTCTaGAGAGTATCAACCTGCCGGCACAGGATGTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: LETASAQTSKYF*RVSTCRHRMSR Trigger: TCGGGACATCCTGTGCCGGCAGGTTGATACTCTCCAGAAGTACTTTGATGTCTGTGCTGACGCTGTCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS CAA 72 bp | CAGAATAGCCACTCGCTCCAGACACCAGTGACACCATaGAGCCATGTCTACGCAAGCTGGACTCAGATCCAT | + |
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Preference number: 6 (lower is better) Translates to: QNSHSLQTPVTP*SHVYASWTQIH Trigger: ATGGATCTGAGTCCAGCTTGCGTAGACATGGCTCAATGGTGTCACTGGTGTCTGGAGCGAGTGGCTATTCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS CAA 90 bp | TCCATATCCCGATTCAGTCTTGTGCTGTTCAATGGCGTCTACCCATaGCTGTCTGTGCTCCGGGTCCTGAGCTCGAAGGTACCAAACACT | + |
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Preference number: 6 (lower is better) Translates to: SISRFSLVLFNGVYP*LSVLRVLSSKVPNT Trigger: AGTGTTTGGTACCTTCGAGCTCAGGACCCGGAGCACAGACAGCAATGGGTAGACGCCATTGAACAGCACAAGACTGAATCGGGATATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS CAA 90 bp | GCTGGCGCCCATCCTCCTGGGTTCACATTAGCTACATACGTGATCTaGCACAGAATGTTGTCTCTGCTTATCTCCTGGTCTCCCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: AGAHPPGFTLATYVI*HRMLSLLISWSPSG Trigger: ACCAGAGGGAGACCAGGAGATAAGCAGAGACAACATTCTGTGCAAGATCACGTATGTAGCTAATGTGAACCCAGGAGGATGGGCGCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS CCA 72 bp | ACACCAGTGACACCATTGAGCCATGTCTACGCAAGCTaGACTCAGATCCATATCCCGATTCAGTCTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TPVTPLSHVYAS*TQIHIPIQSCA Trigger: AGCACAAGACTGAATCGGGATATGGATCTGAGTCCAGCTTGCGTAGACATGGCTCAATGGTGTCACTGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS GCA 72 bp | GCACAGACATCAAAGTACTTCTGGAGAGTATCAACCTaGCGGCACAGGATGTCCCGAAATGTCTCCATTTCA | + |
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Preference number: 6 (lower is better) Translates to: AQTSKYFWRVST*RHRMSRNVSIS Trigger: TGAAATGGAGACATTTCGGGACATCCTGTGCCGGCAGGTTGATACTCTCCAGAAGTACTTTGATGTCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS CCA 72 bp | AGCATCAAAGAACTCTTCCTCATTAATCAGACTGTTTaGACCTTCTTCATAATCCGGCCCTCCGAAACGGGG | + |
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Preference number: 6 (lower is better) Translates to: SIKELFLINQTV*TFFIIRPSETG Trigger: CCCCGTTTCGGAGGGCCGGATTATGAAGAAGGTCCAAACAGTCTGATTAATGAGGAAGAGTTCTTTGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS TCA 72 bp | CCTGAGCTCGAAGGTACCAAACACTATCATTTACACTaGTATCAAACCGGCATTCATCAAAATCGTGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: PELEGTKHYHLH*YQTGIHQNREA Trigger: CGCCTCACGATTTTGATGAATGCCGGTTTGATATCAGTGTAAATGATAGTGTTTGGTACCTTCGAGCTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS TCA 72 bp | TGTCTCCAGATGGCAATGATGTGGGCCAGTGTAACCTaGCCTTTTCACTCTGTGACTGTTCCTCTATTTTAT | + |
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Preference number: 6 (lower is better) Translates to: CLQMAMMWASVT*PFHSVTVPLFY Trigger: ATAAAATAGAGGAACAGTCACAGAGTGAAAAGGTCAGGTTACACTGGCCCACATCATTGCCATCTGGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS TCA 72 bp | TTCTGTACCATTTCTTCAACCTGGGAGCTGAATCTGTaGACATCGTCAGAGGCACTGACTAGATCAATGGAA | + |
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Preference number: 6 (lower is better) Translates to: FCTISSTWELNL*TSSEALTRSME Trigger: TTCCATTGATCTAGTCAGTGCCTCTGACGATGTTCACAGATTCAGCTCCCAGGTTGAAGAAATGGTACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077672.12 |
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| CDS CCA 72 bp | AATGTCTCCATTTCAGCCAGTTTCTCACGTAAACTGTaGCCTTTCTTGAAAGAAGAGGTGGACGTAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: NVSISASFSRKL*PFLKEEVDVAE Trigger: TTCTGCTACGTCCACCTCTTCTTTCAAGAAAGGCCACAGTTTACGTGAGAAACTGGCTGAAATGGAGACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS TCA 72 bp | ATCTCCTGGTCTCCCTCTGGTGGGCTTACTAAAGTTTaGCAAATCATAGCAATATTGATTTTGGCACGGACA | + |
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Preference number: 6 (lower is better) Translates to: ISWSPSGGLTKV*QIIAILILART Trigger: TGTCCGTGCCAAAATCAATATTGCTATGATTTGTCAAACTTTAGTAAGCCCACCAGAGGGAGACCAGGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS TCA 72 bp | AAGCGGGCCATACTCTCTTGTGCGTTTGATAAACGATaGTTGCATTATCAGCTAATGTTTCCACCACATGAA | + |
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Preference number: 6 (lower is better) Translates to: KRAILSCAFDKR*LHYQLMFPPHE Trigger: TTCATGTGGTGGAAACATTAGCTGATAATGCAATCATCGTTTATCAAACGCACAAGAGAGTATGGCCCGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS TCA 72 bp | CAGCTCTCTTCCCGTTTTACCATTAATTCAATACAATaGGAAAGTGTAGCAAGGATTCCAGCAGTAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: QLSSRFTINSIQ*ESVARIPAVVA Trigger: AGCAACTACTGCTGGAATCCTTGCTACACTTTCTCATTGTATTGAATTAATGGTAAAACGGGAAGAGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS TCA 72 bp | TTGCAGACCTCATGTCCTGTAACACCTTTAACTGCATaGGTAGCTTTCAAAGGATCCAGAACAATTCCATTT | + |
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Preference number: 6 (lower is better) Translates to: LQTSCPVTPLTA*VAFKGSRTIPF Trigger: AAATGGAATTGTTCTGGATCCTTTGAAAGCTACTCATGCAGTTAAAGGTGTTACAGGACATGAGGTCTGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS TCA 72 bp | ACGATGATTGCATTATCAGCTAATGTTTCCACCACATaGAAGTTTTCTATAGTAGTTTCCCAGTCATTGCGA | + |
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Preference number: 6 (lower is better) Translates to: TMIALSANVSTT*KFSIVVSQSLR Trigger: TCGCAATGACTGGGAAACTACTATAGAAAACTTTCATGTGGTGGAAACATTAGCTGATAATGCAATCATCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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| CDS GCA 72 bp | ACAATGAGAAAGTGTAGCAAGGATTCCAGCAGTAGTTaGTTTAAAAGTTATTGCTTCCCCTTTAAAGTCTAT | + |
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Preference number: 6 (lower is better) Translates to: TMRKCSKDSSSS*FKSYCFPFKVY Trigger: ATAGACTTTAAAGGGGAAGCAATAACTTTTAAAGCAACTACTGCTGGAATCCTTGCTACACTTTCTCATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077672.12 ENSMUST00000109444.3 ENSMUST00000179226.8 |
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