Pregenerated sensors for CERS6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027035Ensembl transcript IDs: ENSMUST00000028426.9, ENSMUST00000176018.2
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACGGGGCCGAGTCTGCGATAGTGAAGTGGGTGTGTCCTATGTGTaGCAGCAGATGCTCCAGGACCTGAGTCTATCTCAGGGAGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: PRGRVCDSEVGVSYV*QQMLQDLSLSQGAL Trigger: CAGAGCTCCCTGAGATAGACTCAGGTCCTGGAGCATCTGCTGCCACACATAGGACACACCCACTTCACTATCGCAGACTCGGCCCCGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CCA 90 bp | GGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTaGCATTGGTGGGAGTCTCAATGCACGCACCTGCCGATGCATTCC | + |
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Preference number: 1 (lower is better) Translates to: GGSLNARTCPCIPVT*HWWESQCTHLPMHS Trigger: GGAATGCATCGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CCA 90 bp | GGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTaGCATTGGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCC | + |
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Preference number: 1 (lower is better) Translates to: GGSLNARTCPCIPVT*HWWESQCTHLPMHS Trigger: GGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR TCA 90 bp | GTGTTAAGGAGACAGGTGTACATGGGCACACCCTCTCCCACCTCCTaGAAATGGCACCAGACAGAGAAGAAGGGATGGGAAGAGCTGATC | + |
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Preference number: 1 (lower is better) Translates to: VLRRQVYMGTPSPTS*KWHQTEKKGWEELI Trigger: GATCAGCTCTTCCCATCCCTTCTTCTCTGTCTGGTGCCATTTTCAGGAGGTGGGAGAGGGTGTGCCCATGTACACCTGTCTCCTTAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CCA 90 bp | GGAGTCTCAATGCACGCACCTGCCGATGCTTCCTGTCAAAGGCTTTaGGATGCATCAAGTCACAAAAGCCTGCAGGAGGCGAACCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: GVSMHAPADASCQRL*DASSHKSLQEANLL Trigger: AAGAAGGTTCGCCTCCTGCAGGCTTTTGTGACTTGATGCATCCCAAAGCCTTTGACAGGAAGCATCGGCAGGTGCGTGCATTGAGACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR GCA 90 bp | CTCAATGCACGCACCTGCCGATGCTTCCTGTCAAAGGCTTTGGGATaGATCAAGTCACAAAAGCCTGCAGGAGGCGAACCTTCTTATTCG | + |
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Preference number: 1 (lower is better) Translates to: LNARTCRCFLSKALG*IKSQKPAGGEPSYS Trigger: CGAATAAGAAGGTTCGCCTCCTGCAGGCTTTTGTGACTTGATGCATCCCAAAGCCTTTGACAGGAAGCATCGGCAGGTGCGTGCATTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CCA 90 bp | GCCACTCTCTTTCATCTGATCACCAAGAGTGGCAAGGAAAACACCTaGTTCACCCTGTTTAGACTCACGTGGGGCAATGGTCACCAACTG | + |
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Preference number: 1 (lower is better) Translates to: ATLFHLITKSGKENT*FTLFRLTWGNGHQL Trigger: CAGTTGGTGACCATTGCCCCACGTGAGTCTAAACAGGGTGAACCAGGTGTTTTCCTTGCCACTCTTGGTGATCAGATGAAAGAGAGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CCA 90 bp | ACCATGGTTCTCAGAAGACACACAACCCAGGAAGCTAAGTATTCGTaGACCTGTGTTAAGGAGACAGGTGTACATGGGCACACCCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: TMVLRRHTTQEAKYS*TCVKETGVHGHTLS Trigger: GGAGAGGGTGTGCCCATGTACACCTGTCTCCTTAACACAGGTCCACGAATACTTAGCTTCCTGGGTTGTGTGTCTTCTGAGAACCATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR GCA 90 bp | TGCACTTTTACAATGAATACTCGAATGACCCACAATACTGATCCTTaGAGTTGCTCCTCTGCTCTCAACATCCACGGGGCCGAGTCTGCG | + |
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Preference number: 1 (lower is better) Translates to: CTFTMNTRMTHNTDP*SCSSALNIHGAESA Trigger: CGCAGACTCGGCCCCGTGGATGTTGAGAGCAGAGGAGCAACTGCAAGGATCAGTATTGTGGGTCATTCGAGTATTCATTGTAAAAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR GCA 90 bp | ACGTGGGGCAATGGTCACCAACTGTATGGGCAAATAGAAAATGGGTaGAGAACAGAAGGAAAGCCAACCTACTGGGAACTGTGTGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: TWGNGHQLYGQIENG*RTEGKPTYWELCED Trigger: ATCCTCACACAGTTCCCAGTAGGTTGGCTTTCCTTCTGTTCTGCACCCATTTTCTATTTGCCCATACAGTTGGTGACCATTGCCCCACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR GCA 90 bp | GAGTCTATCTCAGGGAGCTCTGTGACTGAGAGGCTGAGAGGGCTTTaGTACTCTCAGCTGGTGCAAAGCAAAACTAAAGAGAAGGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: ESISGSSVTERLRGL*YSQLVQSKTKEKES Trigger: ACTTTCCTTCTCTTTAGTTTTGCTTTGCACCAGCTGAGAGTAGCAAAGCCCTCTCAGCCTCTCAGTCACAGAGCTCCCTGAGATAGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CCA 90 bp | GGGCAAATAGAAAATGGGTGCAGAACAGAAGGAAAGCCAACCTACTaGGAACTGTGTGAGGATCTGGCATGGGATGTTCCTTGCTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: GQIENGCRTEGKPTY*ELCEDLAWDVPCSK Trigger: CTTAGAGCAAGGAACATCCCATGCCAGATCCTCACACAGTTCCCAGTAGGTTGGCTTTCCTTCTGTTCTGCACCCATTTTCTATTTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CCA 90 bp | AAGAGTGGCAAGGAAAACACCTGGTTCACCCTGTTTAGACTCACGTaGGGCAATGGTCACCAACTGTATGGGCAAATAGAAAATGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: KSGKENTWFTLFRLT*GNGHQLYGQIENGC Trigger: GCACCCATTTTCTATTTGCCCATACAGTTGGTGACCATTGCCCCACGTGAGTCTAAACAGGGTGAACCAGGTGTTTTCCTTGCCACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CCA 90 bp | GGGTTGGAGGCAATGAAAGGCACCCATTCGTTCTCTCAGAAGAACTaGTCAACACAGACTCAGGGGAGCTCCAATGTCCTTTATAACAAC | + |
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Preference number: 1 (lower is better) Translates to: GLEAMKGTHSFSQKN*STQTQGSSNVLYNN Trigger: GTTGTTATAAAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGAATGGGTGCCTTTCATTGCCTCCAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR GCA 90 bp | GACTCCCAGAACCCAGTATGTGGGGCCCTTGTATCTGGGAACTTATaGAAGAGATACTGTTTCATACTCAGAACACTGACTTCACTGGAG | + |
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Preference number: 1 (lower is better) Translates to: DSQNPVCGALVSGNL*KRYCFILRTLTSLE Trigger: CTCCAGTGAAGTCAGTGTTCTGAGTATGAAACAGTATCTCTTGCATAAGTTCCCAGATACAAGGGCCCCACATACTGGGTTCTGGGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR GCA 90 bp | CTAGAGTCCTTTCTACACACACTTTGGTACCCTGGGGAGTTTGGATaGAACCAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTAC | + |
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Preference number: 1 (lower is better) Translates to: LESFLHTLWYPGEFG*NQEGGDITTSYANY Trigger: GTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTGGTTGCATCCAAACTCCCCAGGGTACCAAAGTGTGTGTAGAAAGGACTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CCA 90 bp | GGGCCAGCACTTAACTTCTTATTTCCAAAGGTGTTGCGGCCTCTCTaGGTTAATGACATCATCTCCCATACTGATAAATGGCCCACATCC | + |
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Preference number: 1 (lower is better) Translates to: GPALNFLFPKVLRPL*VNDIISHTDKWPTS Trigger: GGATGTGGGCCATTTATCAGTATGGGAGATGATGTCATTAACCCAGAGAGGCCGCAACACCTTTGGAAATAAGAAGTTAAGTGCTGGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR GCA 90 bp | ATGCTTCCTGTCAAAGGCTTTGGGATGCATCAAGTCACAAAAGCCTaGAGGAGGCGAACCTTCTTATTCGGGTGTCTACGTATCTCATTA | + |
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Preference number: 1 (lower is better) Translates to: MLPVKGFGMHQVTKA*RRRTFLFGCLRISL Trigger: TAATGAGATACGTAGACACCCGAATAAGAAGGTTCGCCTCCTGCAGGCTTTTGTGACTTGATGCATCCCAAAGCCTTTGACAGGAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CCA 90 bp | AGAGTTACTTTTTCTAGAGTCCTTTCTACACACACTTTGGTACCCTaGGGAGTTTGGATGCAACCAGGAAGGAGGAGACATCACCACAAG | + |
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Preference number: 1 (lower is better) Translates to: RVTFSRVLSTHTLVP*GVWMQPGRRRHHHK Trigger: CTTGTGGTGATGTCTCCTCCTTCCTGGTTGCATCCAAACTCCCCAGGGTACCAAAGTGTGTGTAGAAAGGACTCTAGAAAAAGTAACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR TCA 90 bp | GGCGAACCTTCTTATTCGGGTGTCTACGTATCTCATTACTTATGGTaGCTTACGTTCTTCAACATGATTTTCTCCATGAAAAGTGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: GEPSYSGVYVSHYLW*LTFFNMIFSMKSGC Trigger: GCAGCCACTTTTCATGGAGAAAATCATGTTGAAGAACGTAAGTCACCATAAGTAATGAGATACGTAGACACCCGAATAAGAAGGTTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CCA 90 bp | GCAACTCTGACATTGATTTACCCCAAAATGATTAGTAATGTAAACTaGGTTGGAGGCAATGAAAGGCACCCATTCGTTCTCTCAGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: ATLTLIYPKMISNVN*VGGNERHPFVLSEE Trigger: TTCTTCTGAGAGAACGAATGGGTGCCTTTCATTGCCTCCAACCCAGTTTACATTACTAATCATTTTGGGGTAAATCAATGTCAGAGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR TCA 90 bp | CTTGCACTGTCTTCTGTGGTAACAACTAGACATGCTTCCAAGCTTTaGAAATTATTGTCTGGACCATACCAGAAAATACTGTTTTGTAAT | + |
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Preference number: 1 (lower is better) Translates to: LALSSVVTTRHASKL*KLLSGPYQKILFCN Trigger: ATTACAAAACAGTATTTTCTGGTATGGTCCAGACAATAATTTTCAAAGCTTGGAAGCATGTCTAGTTGTTACCACAGAAGACAGTGCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR CCA 90 bp | GCACACCCTCTCCCACCTCCTGAAAATGGCACCAGACAGAGAAGAAGGGATGGGTGCAGGGGGTGGGGGTaGGTGAGGGCTCATGACGTA | + |
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Preference number: 2 (lower is better) Translates to: AHPLPPPENGTRQRRRDGCRGWG*VRAHDV Trigger: TACGTCATGAGCCCTCACCCACCCCCACCCCCTGCA...CCCATCCCTTCTTCTCTGTCTGGTGCCATTTTCAGGAGGTGGGAGAGGGTGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACCCTGGGGAGTTTGGATaGAACCAGGAAGGAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: TCRCIPVTWHWWESQCTHPGEFG*NQEGGD Trigger: GTCTCCTCCTTCCTGGTTGCATCCAAACTCCCCAGG...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACCCTCCTAGGGGTGGGTaGGTGCTATGTACACATAGG | + |
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Preference number: 2 (lower is better) Translates to: TCRCIPVTWHWWESQCTHPPRGG*VLCTHR Trigger: CCTATGTGTACATAGCACCCACCCACCCCTAGGAGG...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CAA 90 bp | GGGAGTCTCAATGCACGCACCTGCCGATGCTTCCTGTCAAAGGCTTaGGGATGCATCAAGTCACAAAAGCCTGCAGGAGGCGAACCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GSLNARTCRCFLSKA*GCIKSQKPAGGEPS Trigger: AGAAGGTTCGCCTCCTGCAGGCTTTTGTGACTTGATGCATCCCAAAGCCTTTGACAGGAAGCATCGGCAGGTGCGTGCATTGAGACTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTCTTGGTCCGTGCCTTTGCTGCCTTGTTCATCAGCATTGGACGCCAATGAGGGAGCTCTGTGACTaGGAGGCTGAGAGGGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: VFLGPCLCCLVHQHWTPMRELCD*EAERAL Trigger: CAAAGCCCTCTCAGCCTCTCAGTCACAGAGCTCCCT...CATTGGCGTCCAATGCTGATGAACAAGGCAGCAAAGGCACGGACCAAGAAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACAGGCTGAGAGGGCTTTaGTACTCTCAGCTGGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: TCRCIPVTWHWWESQCTHRLRGL*YSQLVQ Trigger: TTGCACCAGCTGAGAGTAGCAAAGCCCTCTCAGCCT...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR CCA 90 bp | CATTGGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTGGCACACTGGACCACAACGTaGAAAAGGGGCACACACAGA | + |
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Preference number: 2 (lower is better) Translates to: HWWESQCTHLPMHSCHLAHWTTT*KRGTHR Trigger: TCTGTGTGTGCCCCTTTTCCACGTTGTGGTCCAGTG...TGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACCGAAGACAAGGAAAGTaGAAGGCAGGTAGGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: TCRCIPVTWHWWESQCTHRRQGK*KAGRSL Trigger: AAGGCTCCTACCTGCCTTTCACTTTCCTTGTCTTCG...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR TCA 90 bp | GCACACCCTCTCCCACCTCCTGAAAATGGCACCAGACAGAGAAGAAGGGATGGGCTATGTACACATAGGTaGAAGGAGGGCCCTCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: AHPLPPPENGTRQRRRDGLCTHR*KEGPPL Trigger: TAAAGGAGGGCCCTCCTTTCACCTATGTGTACATAG...CCCATCCCTTCTTCTCTGTCTGGTGCCATTTTCAGGAGGTGGGAGAGGGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACCTTGGTCCGTGCCTTTaGTGCCTTGTTCATCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: TCRCIPVTWHWWESQCTHLGPCL*CLVHQH Trigger: ATGCTGATGAACAAGGCAGCAAAGGCACGGACCAAG...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR CCA 90 bp | GCACACCCTCTCCCACCTCCTGAAAATGGCACCAGACAGAGAAGAAGGGATGGGAACTGTGTGAGGATCTaGCATGGGATGTTCCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: AHPLPPPENGTRQRRRDGNCVRI*HGMFLA Trigger: AGCAAGGAACATCCCATGCCAGATCCTCACACAGTT...CCCATCCCTTCTTCTCTGTCTGGTGCCATTTTCAGGAGGTGGGAGAGGGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACCTTCCGTGGAGAAGATaGGTTAGAGCTGCCTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: TCRCIPVTWHWWESQCTHLPWRR*VRAAFD Trigger: ATCAAAGGCAGCTCTAACTCATCTTCTCCACGGAAG...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR TCA 90 bp | CATTGGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTGGCAACAAGTCAGACTTTCTaGGAGCTATGGCCTGCCATA | + |
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Preference number: 2 (lower is better) Translates to: HWWESQCTHLPMHSCHLATSQTF*ELWPAI Trigger: TATGGCAGGCCATAGCTCTCAGAAAGTCTGACTTGT...TGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR GCA 90 bp | GCACACCCTCTCCCACCTCCTGAAAATGGCACCAGACAGAGAAGAAGGGATGGGTTTCCCCACAGCTGTTaGTGCTATTCTCCAGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: AHPLPPPENGTRQRRRDGFPHSC*CYSPVE Trigger: TTCTACTGGAGAATAGCAGCAACAGCTGTGGGGAAA...CCCATCCCTTCTTCTCTGTCTGGTGCCATTTTCAGGAGGTGGGAGAGGGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR CCA 90 bp | CATTGGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTGGCAGGCAAGGAAAACACCTaGTTCACCCTGTTTAGACTC | + |
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Preference number: 2 (lower is better) Translates to: HWWESQCTHLPMHSCHLAGKENT*FTLFRL Trigger: GAGTCTAAACAGGGTGAACCAGGTGTTTTCCTTGCC...TGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR CAA 90 bp | TACTTGAAGGCACCTGCAGTAGTTAGAGCCCTCCACATTTCTTTCTaGCTACACAAGAGCCAGGTGATCACTATCCCCTCAGGGCGACTC | + |
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Preference number: 2 (lower is better) Translates to: YLKAPAVVRALHISF*LHKSQVITIPSGRL Trigger: GAGTCGCCCTGAGGGGATAGTGATCACCTGGCTCTTGTGTAGCAAGAAAGAAATGTGGAGGGCTCTAACTACTGCAGGTGCCTTCAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR TCA 90 bp | TCGTTCTCTCAGAAGAACTGGTCAACACAGACTCAGGGGAGCTCCAATGTCCTTCTACTGGGAACTGTGTaGGGATCTGGCATGGGATGT | + |
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Preference number: 2 (lower is better) Translates to: SFSQKNWSTQTQGSSNVLLLGTV*GSGMGC Trigger: ACATCCCATGCCAGATCCTCACACAGTTCCCAGTAG...AAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR GCA 90 bp | CATTGGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTGGCACCCCACAGCTGTTGCTaGTATTCTCCAGTAGAATTT | + |
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Preference number: 2 (lower is better) Translates to: HWWESQCTHLPMHSCHLAPHSCC*YSPVEF Trigger: AAATTCTACTGGAGAATAGCAGCAACAGCTGTGGGG...TGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR TCA 90 bp | CATTGGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTGGCAGATAGGGCTTTCTCTTaGAAGCTGGTTGCAATAAAG | + |
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Preference number: 2 (lower is better) Translates to: HWWESQCTHLPMHSCHLADRAFS*KLVAIK Trigger: CTTTATTGCAACCAGCTTTCAAGAGAAAGCCCTATC...TGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACAATCACACAGTCACTTaGACTGTCTTCTGTGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: TCRCIPVTWHWWESQCTHNHTVT*TVFCGN Trigger: GTTACCACAGAAGACAGTGCAAGTGACTGTGTGATT...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR GCA 90 bp | CATTGGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTGGCAGCTACTCTCAGCTGGTaGAAAGCAAAACTAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: HWWESQCTHLPMHSCHLAATLSW*KAKLKR Trigger: TCTCTTTAGTTTTGCTTTGCACCAGCTGAGAGTAGC...TGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTCTTGGTCCGTGCCTTTGCTGCCTTGTTCATCAGCATTGGACGCCAATGGGAAATAGCTCCACTTaGAGAGAAATTCACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: VFLGPCLCCLVHQHWTPMGNSST*REIHRS Trigger: GCTCCTGTGAATTTCTCTTCAAGTGGAGCTATTTCC...CATTGGCGTCCAATGCTGATGAACAAGGCAGCAAAGGCACGGACCAAGAAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR GCA 90 bp | GCACACCCTCTCCCACCTCCTGAAAATGGCACCAGACAGAGAAGAAGGGATGGGGAAAGGCAATACATTTaGTCAAAAAGTATAGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: AHPLPPPENGTRQRRRDGERQYI*SKSIGL Trigger: TAGGCCTATACTTTTTGAGCAAATGTATTGCCTTTC...CCCATCCCTTCTTCTCTGTCTGGTGCCATTTTCAGGAGGTGGGAGAGGGTGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTACTCACGTGGGGCAATaGTCACCAACTGTATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TRKEETSPQAMLITKITTTHVGQ*SPTVWA Trigger: TGCCCATACAGTTGGTGACCATTGCCCCACGTGAGT...AGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| 3UTR-3UTR CCA 90 bp | TCGTTCTCTCAGAAGAACTGGTCAACACAGACTCAGGGGAGCTCCAATGTCCTTTCTGATCACCAAGAGTaGCAAGGAAAACACCTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: SFSQKNWSTQTQGSSNVLSDHQE*QGKHLV Trigger: AACCAGGTGTTTTCCTTGCCACTCTTGGTGATCAGA...AAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CCA 90 bp | TCGTTCTCTCAGAAGAACTGGTCAACACAGACTCAGGGGAGCTCCAATGTCCTTACTTGTCCTGTGGGGTaGATGTTTCTAGCAACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SFSQKNWSTQTQGSSNVLTCPVG*MFLATR Trigger: TCTTGTTGCTAGAAACATCCACCCCACAGGACAAGT...AAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACTTATCCGTCCATTTTTaGGAGAACATTAGACAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: TCRCIPVTWHWWESQCTHLSVHF*ENIRQR Trigger: TCTCTGTCTAATGTTCTCCCAAAAATGGACGGATAA...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTTCTTGGTCCGTGCCTTTGCTGCCTTGTTCATCAGCATTGGACGCCAATGTCACTGTCTCAACACTaGTCTTGGTTTTCATCCATT | + |
|
Preference number: 2 (lower is better) Translates to: VFLGPCLCCLVHQHWTPMSLSQH*SWFSSI Trigger: AATGGATGAAAACCAAGAGCAGTGTTGAGACAGTGA...CATTGGCGTCCAATGCTGATGAACAAGGCAGCAAAGGCACGGACCAAGAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTGGAAAGCCAACCTACTaGGAACTGTGTGAGGATCTG | + |
|
Preference number: 2 (lower is better) Translates to: TRKEETSPQAMLITKITTGKPTY*ELCEDL Trigger: CAGATCCTCACACAGTTCCCAGTAGGTTGGCTTTCC...AGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTGGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTGGCAAATACAAGTACACAGTaGTTGTCAAAACCATCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: HWWESQCTHLPMHSCHLANTSTQ*LSKPSH Trigger: ATGAGATGGTTTTGACAACCACTGTGTACTTGTATT...TGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACGATTTAAATGCAAGGTaGAAGATTCAGACCTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TCRCIPVTWHWWESQCTHDLNAR*KIQTFL Trigger: TAGAAAGGTCTGAATCTTCCACCTTGCATTTAAATC...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTTGTGAGGATCTGGCATaGGATGTTCCTTGCTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: TRKEETSPQAMLITKITTCEDLA*DVPCSK Trigger: CTTAGAGCAAGGAACATCCCATGCCAGATCCTCACA...AGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CCA 90 bp | TCGTTCTCTCAGAAGAACTGGTCAACACAGACTCAGGGGAGCTCCAATGTCCTTCTAAGGAAAGGAATATaGAGGACGATGATGAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: SFSQKNWSTQTQGSSNVLLRKGI*RTMMNQ Trigger: CTGATTCATCATCGTCCTCCATATTCCTTTCCTTAG...AAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTTAATTATGGGATGCATTTaGGGAGGAAGGCAAGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: QEGGDITTSYANYQNHHLIMGCI*GGRQGV Trigger: AACCCCTTGCCTTCCTCCTCAAATGCATCCCATAAT...TAAGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTCTGGTTGCAATAAAGTaGTTTGCAGGGAAGGAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TRKEETSPQAMLITKITTLVAIK*FAGKEV Trigger: GACTTCCTTCCCTGCAAAGCACTTTATTGCAACCAG...AGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR GCA 90 bp | TCGTTCTCTCAGAAGAACTGGTCAACACAGACTCAGGGGAGCTCCAATGTCCTTCAGTTACATACAGCATaGCTACATAGAAATAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: SFSQKNWSTQTQGSSNVLQLHTA*LHRNNG Trigger: TCCATTATTTCTATGTAGGCATGCTGTATGTAACTG...AAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTTGCAATAAAGTGCTTTaGAGGGAAGGAAGTCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: TRKEETSPQAMLITKITTCNKVL*REGSLC Trigger: GCAAAGACTTCCTTCCCTGCAAAGCACTTTATTGCA...AGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGTTACCAACATAGTCAACCCCCGACAACCTACCACAGAAAAGAAGTCTCATGGTCACCAACTGTATaGGCAAATAGAAAATGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LCYQHSQPPTTYHRKEVSWSPTV*ANRKWV Trigger: CACCCATTTTCTATTTGCCCATACAGTTGGTGACCA...TGAGACTTCTTTTCTGTGGTAGGTTGTCGGGGGTTGACTATGTTGGTAACAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CCA 90 bp | TCGTTCTCTCAGAAGAACTGGTCAACACAGACTCAGGGGAGCTCCAATGTCCTTTCTCAACACTGCTCTTaGTTTTCATCCATTTGTATT | + |
|
Preference number: 2 (lower is better) Translates to: SFSQKNWSTQTQGSSNVLSQHCS*FSSICI Trigger: AATACAAATGGATGAAAACCAAGAGCAGTGTTGAGA...AAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CCA 90 bp | TCGTTCTCTCAGAAGAACTGGTCAACACAGACTCAGGGGAGCTCCAATGTCCTTAATCTAATGATAATTTaGGATATGCTCTGTCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SFSQKNWSTQTQGSSNVLNLMII*DMLCLA Trigger: TGCCAGACAGAGCATATCCCAAATTATCATTAGATT...AAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 90 bp | CTTGTTCATCAGCATTGGACGCCAATGACACAATCTAATGATAATTaGGGATATGCTCTGTCTGGCAGTTCAGCAGACATTAGAACCATG | + |
|
Preference number: 2 (lower is better) Translates to: LVHQHWTPMTQSNDN*GYALSGSSADIRTM Trigger: CATGGTTCTAATGTCTGCTGAACTGCCAGACAGAGCATATCCCAAATTATCATTAGATTGTGTCATTGGCGTCCAATGCTGATGAACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 90 bp | ACATTACACAAAGGGCCAGCACTTAACTTCTTATTTCCAAAGGTGTaGCGGCCTCTCTGGGTTAATGACATCATCTCCCATACTGATAAA | + |
|
Preference number: 2 (lower is better) Translates to: TLHKGPALNFLFPKV*RPLWVNDIISHTDK Trigger: TTTATCAGTATGGGAGATGATGTCATTAACCCAGAGAGGCCGCAACACCTTTGGAAATAAGAAGTTAAGTGCTGGCCCTTTGTGTAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CGCACCTGCCGATGCATTCCTGTCACTTGGCATTGGTaGGAGTCTCAATGCACGCACCTGCCGATGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RTCRCIPVTWHW*ESQCTHLPMLP Trigger: AGGAAGCATCGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGTGCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CTCAATGCACGCACCTGCCGATGCATTCCTGTCACTTaGCATTGGTGGGAGTCTCAATGCACGCACCTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: LNARTCRCIPVT*HWWESQCTHLP Trigger: CGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGTGCGTGCATTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CGCACCTGCCGATGCATTCCTGTCACTTGGCATTGGTaGGAGTCTCAATGCACGCACCTGCCGATGCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: RTCRCIPVTWHW*ESQCTHLPMHS Trigger: GGAATGCATCGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGTGCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CGCACCTGCCCATGCATTCCTGTCACTTGGCATTGGTaGGAGTCTCAATGCACGCACCTGCCGATGCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: RTCPCIPVTWHW*ESQCTHLPMHS Trigger: GGAATGCATCGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATGGGCAGGTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTaGCATTGGTGGGAGTCTCAATGCACGCACCTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: LNARTCPCIPVT*HWWESQCTHLP Trigger: CGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CGCACCTGCCCATGCATTCCTGTCACTTGGCATTGGTaGGAGTCTCAATGCACGCACCTGCCCATGCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: RTCPCIPVTWHW*ESQCTHLPMHS Trigger: GGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATGGGCAGGTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTaGCATTGGTGGGAGTCTCAATGCACGCACCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LNARTCPCIPVT*HWWESQCTHLP Trigger: GGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CCTGTGGCCCAGGCTTTTGCAACTTCTCGGCATTGGTaGGAGTCTCAATGCACGCACCTGCCCATGCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: PVAQAFATSRHW*ESQCTHLPMHS Trigger: GGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCGAGAAGTTGCAAAAGCCTGGGCCACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | CTTCTCGGCATTGGTGGGAGTCTCAATGCACGCACCTaGCCATGCATTCCTGTCACTTGGCATTGGTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLGIGGSLNART*PCIPVTWHWWE Trigger: CTCCCACCAATGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | CATCGCTTCCCAGCAATCCGAGAGTGCCCGATTCCATaGAGACACAGTAACTCACCCTGTGGCCCAGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HRFPAIRECPIP*RHSNSPCGPGF Trigger: AAAGCCTGGGCCACAGGGTGAGTTACTGTGTCTGCATGGAATCGGGCACTCTCGGATTGCTGGGAAGCGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR TCA 72 bp | CCTCCTAGGGGTGGGTGGGTGCTATGTACACATAGGTaGAAGGAGGGCCCTCCTTTAGCCCATCAGTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: PPRGGWVLCTHR*KEGPPLAHQFM Trigger: CATGAACTGATGGGCTAAAGGAGGGCCCTCCTTTCACCTATGTGTACATAGCACCCACCCACCCCTAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | CGCACCTGCCGATGCTTCCTGTCAAAGGCTTTGGGATaGATCAAGTCACAAAAGCCTGCAGGAGGCGAACCT | + |
|
Preference number: 3 (lower is better) Translates to: RTCRCFLSKALG*IKSQKPAGGEP Trigger: AGGTTCGCCTCCTGCAGGCTTTTGTGACTTGATGCATCCCAAAGCCTTTGACAGGAAGCATCGGCAGGTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | GGCATTGGTGGGAGTCTCAATGCACGCACCTGCCGATaGATTCCTGTCACTTGGCATTGGTGGGAGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GIGGSLNARTCR*IPVTWHWWESQ Trigger: TTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGTGCGTGCATTGAGACTCCCACCAATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | TCACTTGGCATTGGTGGGAGTCTCAATGCACGCACCTaGCGATGCATTCCTGTCACTTGGCATTGGTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLGIGGSLNART*RCIPVTWHWWE Trigger: CTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | GGCATTGGTGGGAGTCTCAATGCACGCACCTGCCCATaGATTCCTGTCACTTGGCATTGGTGGGAGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GIGGSLNARTCP*IPVTWHWWESQ Trigger: TTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | TCACTTGGCATTGGTGGGAGTCTCAATGCACGCACCTaGCCATGCATTCCTGTCACTTGGCATTGGTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLGIGGSLNART*PCIPVTWHWWE Trigger: CTCCCACCAATGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | ATGCACGCACCTGCCGATGCTTCCTGTCAAAGGCTTTaGGATGCATCAAGTCACAAAAGCCTGCAGGAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: MHAPADASCQRL*DASSHKSLQEA Trigger: CGCCTCCTGCAGGCTTTTGTGACTTGATGCATCCCAAAGCCTTTGACAGGAAGCATCGGCAGGTGCGTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR TCA 72 bp | AGACAGGTGTACATGGGCACACCCTCTCCCACCTCCTaGAAATGGCACCAGACAGAGAAGAAGGGATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RQVYMGTPSPTS*KWHQTEKKGWE Trigger: TTCCCATCCCTTCTTCTCTGTCTGGTGCCATTTTCAGGAGGTGGGAGAGGGTGTGCCCATGTACACCTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | GGCATTGGTGGGAGTCTCAATGCACGCACCTGCCGATaGTTCCTGTCAAAGGCTTTGGGATGCATCAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GIGGSLNARTCR*FLSKALGCIKS Trigger: TGACTTGATGCATCCCAAAGCCTTTGACAGGAAGCATCGGCAGGTGCGTGCATTGAGACTCCCACCAATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | TCACTTGGCATTGGTGGGAGTCTCAATGCACGCACCTaGCGATGCTTCCTGTCAAAGGCTTTGGGATGCATC | + |
|
Preference number: 3 (lower is better) Translates to: SLGIGGSLNART*RCFLSKALGCI Trigger: GATGCATCCCAAAGCCTTTGACAGGAAGCATCGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | TGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATaGACGCACCTGCCGATGCATTCCTGTCACTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CIPVTWHWWESQ*THLPMHSCHLA Trigger: TGCCAAGTGACAGGAATGCATCGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | TGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATaGACGCACCTGCCCATGCATTCCTGTCACTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CIPVTWHWWESQ*THLPMHSCHLA Trigger: TGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | GCTTTTGCAACTTCTCGGCATTGGTGGGAGTCTCAATaGACGCACCTGCCCATGCATTCCTGTCACTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AFATSRHWWESQ*THLPMHSCHLA Trigger: TGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCGAGAAGTTGCAAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | TGCAGACACAGTAACTCACCCTGTGGCCCAGGCTTTTaGAACTTCTCGGCATTGGTGGGAGTCTCAATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CRHSNSPCGPGF*NFSALVGVSMH Trigger: GTGCATTGAGACTCCCACCAATGCCGAGAAGTTGCAAAAGCCTGGGCCACAGGGTGAGTTACTGTGTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CGAGTCTGCGATAGTGAAGTGGGTGTGTCCTATGTGTaGCAGCAGATGCTCCAGGACCTGAGTCTATCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RVCDSEVGVSYV*QQMLQDLSLSQ Trigger: CTGAGATAGACTCAGGTCCTGGAGCATCTGCTGCCACACATAGGACACACCCACTTCACTATCGCAGACTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CAA 90 bp | TCGTTCTCTCAGAAGAACTGGTCAACACAGACTCAGGGGAGCTCCAATGTCCTTGGTACCCTGGGGAGTTaGGATGCAACCAGGAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SFSQKNWSTQTQGSSNVLGTLGS*DATRKE Trigger: CTCCTTCCTGGTTGCATCCAAACTCCCCAGGGTACC...AAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTGGCAATGCATTCCTGTCACTaGGCATTGGTGGGAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HWWESQCTHLPMHSCHLAMHSCH*ALVGVS Trigger: TGAGACTCCCACCAATGCCAAGTGACAGGAATGCAT...TGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | TGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATaGACGCACCTGCCGATGCTTCCTGTCAAAGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CIPVTWHWWESQ*THLPMLPVKGF Trigger: AAAGCCTTTGACAGGAAGCATCGGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTGGCACTCATGACGTATTCTTaGGCAATTTTCCCCACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HWWESQCTHLPMHSCHLALMTYS*AIFPTA Trigger: AGCTGTGGGGAAAATTGCCAAAGAATACGTCATGAG...TGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CAA 90 bp | GCACACCCTCTCCCACCTCCTGAAAATGGCACCAGACAGAGAAGAAGGGATGGGATGCACTGTAATGTTTaGCTATTGGTTACTCAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: AHPLPPPENGTRQRRRDGMHCNV*LLVTQR Trigger: GCGCTGAGTAACCAATAGCAAAACATTACAGTGCAT...CCCATCCCTTCTTCTCTGTCTGGTGCCATTTTCAGGAGGTGGGAGAGGGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACAGCAGGGACACATTTTaGTCACTCTGCGAACATCAA | + |
|
Preference number: 3 (lower is better) Translates to: TCRCIPVTWHWWESQCTHSRDTF*SLCEHQ Trigger: TTGATGTTCGCAGAGTGACAAAAATGTGTCCCTGCT...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | TCAGGGAGCTCTGTGACTGAGAGGCTGAGAGGGCTTTaGTACTCTCAGCTGGTGCAAAGCAAAACTAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SGSSVTERLRGL*YSQLVQSKTKE Trigger: CTCTTTAGTTTTGCTTTGCACCAGCTGAGAGTAGCAAAGCCCTCTCAGCCTCTCAGTCACAGAGCTCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | GTCCTTTCTACACACACTTTGGTACCCTGGGGAGTTTaGATGCAACCAGGAAGGAGGAGACATCACCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: VLSTHTLVPWGV*MQPGRRRHHHK Trigger: CTTGTGGTGATGTCTCCTCCTTCCTGGTTGCATCCAAACTCCCCAGGGTACCAAAGTGTGTGTAGAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR TCA 72 bp | TTCCTTTCTCTGACAGCTACAGGCCATGAAGGGAAATaGCTGGGACTTGGGCACAGGAGTGATGAGAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: FLSLTATGHEGK*LGLGHRSDENC Trigger: ACAGTTCTCATCACTCCTGTGCCCAAGTCCCAGTCATTTCCCTTCATGGCCTGTAGCTGTCAGAGAAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | GAAAATGGGTGCAGAACAGAAGGAAAGCCAACCTACTaGGAACTGTGTGAGGATCTGGCATGGGATGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ENGCRTEGKPTY*ELCEDLAWDVP Trigger: AGGAACATCCCATGCCAGATCCTCACACAGTTCCCAGTAGGTTGGCTTTCCTTCTGTTCTGCACCCATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | GTGGCTATCCTTACGAGACTCCCAGAACCCAGTATGTaGGGCCCTTGTATCTGGGAACTTATGCAAGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: VAILTRLPEPSM*GPCIWELMQEI Trigger: TATCTCTTGCATAAGTTCCCAGATACAAGGGCCCCACATACTGGGTTCTGGGAGTCTCGTAAGGATAGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | GCAATGAAAGGCACCCATTCGTTCTCTCAGAAGAACTaGTCAACACAGACTCAGGGGAGCTCCAATGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AMKGTHSFSQKN*STQTQGSSNVL Trigger: AAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGAATGGGTGCCTTTCATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR GCA 72 bp | TGGATTTACAAGTCAGACTTTCTGAGAGCTATGGCCTaGCATATGTGGATACGATTCCGCGGACAGTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WIYKSDFLRAMA*HMWIRFRGQCL Trigger: CAGACACTGTCCGCGGAATCGTATCCACATATGGCAGGCCATAGCTCTCAGAAAGTCTGACTTGTAAATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | TTTCATCTGATCACCAAGAGTGGCAAGGAAAACACCTaGTTCACCCTGTTTAGACTCACGTGGGGCAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: FHLITKSGKENT*FTLFRLTWGNG Trigger: ACCATTGCCCCACGTGAGTCTAAACAGGGTGAACCAGGTGTTTTCCTTGCCACTCTTGGTGATCAGATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CTGAGCACAGAAACTATGGTGACTGACGCTGTACCATaGTTCTCAGAAGACACACAACCCAGGAAGCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSTETMVTDAVP*FSEDTQPRKLS Trigger: ACTTAGCTTCCTGGGTTGTGTGTCTTCTGAGAACCATGGTACAGCGTCAGTCACCATAGTTTCTGTGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR TCA 72 bp | TTTCTTTTACCAGAGTTCCAGAAGCCTAAAAGGCCGTaGGTGAATGAGCTAAAGGAGACCAGCTCCAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: FLLPEFQKPKRP*VNELKETSSRL Trigger: TAGCCTGGAGCTGGTCTCCTTTAGCTCATTCACTCACGGCCTTTTAGGCTTCTGGAACTCTGGTAAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | AAGGAAAACACCTGGTTCACCCTGTTTAGACTCACGTaGGGCAATGGTCACCAACTGTATGGGCAAATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KENTWFTLFRLT*GNGHQLYGQIE Trigger: TTCTATTTGCCCATACAGTTGGTGACCATTGCCCCACGTGAGTCTAAACAGGGTGAACCAGGTGTTTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CACCTACCATATGGACTAAAGATGACTGGTCTTTCTTaGTCCGTGCCTTTGCTGCCTTGTTCATCAGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: HLPYGLKMTGLS*SVPLLPCSSAL Trigger: CAATGCTGATGAACAAGGCAGCAAAGGCACGGACCAAGAAAGACCAGTCATCTTTAGTCCATATGGTAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTTACATTATGGGATGCATTaGAGGAGGAAGGCAAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: QEGGDITTSYANYQNHHLHYGMH*RRKARG Trigger: ACCCCTTGCCTTCCTCCTCAAATGCATCCCATAATG...TAAGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR TCA 72 bp | GAAACAAACCTCCAAATTAACCACCATTCCTTTCTCTaGCAGCTACAGGCCATGAAGGGAAATGACTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: ETNLQINHHSFL*QLQAMKGNDWD Trigger: GTCCCAGTCATTTCCCTTCATGGCCTGTAGCTGTCAGAGAAAGGAATGGTGGTTAATTTGGAGGTTTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CTTGGTCCGTGCCTTTGCTGCCTTGTTCATCAGCATTaGACGCCAATGACACAATCTAATGATAATTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGPCLCCLVHQH*TPMTQSNDNLG Trigger: TCCCAAATTATCATTAGATTGTGTCATTGGCGTCCAATGCTGATGAACAAGGCAGCAAAGGCACGGACCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR TCA 72 bp | TCAAAATTTTCCACTGAGCACAGAAACTATGGTGACTaGCGCTGTACCATGGTTCTCAGAAGACACACAACC | + |
|
Preference number: 3 (lower is better) Translates to: SKFSTEHRNYGD*RCTMVLRRHTT Trigger: GGTTGTGTGTCTTCTGAGAACCATGGTACAGCGTCAGTCACCATAGTTTCTGTGCTCAGTGGAAAATTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | GTGGGGTGGATGTTTCTAGCAACAAGAAAGTCATTATaGGATGCATTTGAGGAGGAAGGCAAGGGGTTAATT | + |
|
Preference number: 3 (lower is better) Translates to: VGWMFLATRKSL*DAFEEEGKGLI Trigger: AATTAACCCCTTGCCTTCCTCCTCAAATGCATCCCATAATGACTTTCTTGTTGCTAGAAACATCCACCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR TCA 72 bp | AGATGCTCACGCACCGAACTATCTTTAGAAAACAAATaGGGTTCTGTCACTTATTCTAGTCCCCAGGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RCSRTELSLENK*GSVTYSSPQGK Trigger: CTTTCCCTGGGGACTAGAATAAGTGACAGAACCTCATTTGTTTTCTAAAGATAGTTCGGTGCGTGAGCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | AGCAAAAACACAGTGACAGTACAGAGTGATTCTAATTaGCTAATGGCACACCATTCCACTTCTGACAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: SKNTVTVQSDSN*LMAHHSTSDRC Trigger: GCATCTGTCAGAAGTGGAATGGTGTGCCATTAGCCAATTAGAATCACTCTGTACTGTCACTGTGTTTTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTGTCTCAACACTGCTCTaGGTTTTCATCCATTTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: TRKEETSPQAMLITKITTVSTLL*VFIHLY Trigger: ATACAAATGGATGAAAACCAAGAGCAGTGTTGAGAC...AGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR TCA 72 bp | GTTTCTAGCAACAAGAAAGTCATTATGGGATGCATTTaGGGAGGAAGGCAAGGGGTTAATTGTCTTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VSSNKKVIMGCI*GGRQGVNCLSL Trigger: GAGAGAAAGACAATTAACCCCTTGCCTTCCTCCTCAAATGCATCCCATAATGACTTTCTTGTTGCTAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | CTTAACTTCTTATTTCCAAAGGTGTTGCGGCCTCTCTaGGTTAATGACATCATCTCCCATACTGATAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: LNFLFPKVLRPL*VNDIISHTDKW Trigger: CCATTTATCAGTATGGGAGATGATGTCATTAACCCAGAGAGGCCGCAACACCTTTGGAAATAAGAAGTTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR TCA 72 bp | CTTGGTTTTCATCCATTTGTATTTGAGCAAATGCTCTaGTTACTAACAGTACCTCCCGTGTCTTATCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGFHPFVFEQML*LLTVPPVSYHW Trigger: CCAGTGATAAGACACGGGAGGTACTGTTAGTAATCAGAGCATTTGCTCAAATACAAATGGATGAAAACCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR TCA 72 bp | TCTCAACACTGCTCTTGGTTTTCATCCATTTGTATTTaGGCAAATGCTCTGATTACTAACAGTACCTCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: SQHCSWFSSICI*ANALITNSTSR Trigger: ACGGGAGGTACTGTTAGTAATCAGAGCATTTGCTCAAATACAAATGGATGAAAACCAAGAGCAGTGTTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | TTCCGTGGAGAAGATGAGTTAGAGCTGCCTTTGATATaGACAGGATCAACTTACTTCATTTTTATATACCTC | + |
|
Preference number: 3 (lower is better) Translates to: FRGEDELELPLI*TGSTYFIFIYL Trigger: GAGGTATATAAAAATGAAGTAAGTTGATCCTGTCCATATCAAAGGCAGCTCTAACTCATCTTCTCCACGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CCA 72 bp | TCTCCCATACTGATAAATGGCCCACATCCGTACCTTTaGGCTAATTCTACACACTATTTTTCTTCTTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SPILINGPHPYL*ANSTHYFSSSN Trigger: ATTTGAAGAAGAAAAATAGTGTGTAGAATTAGCCCAAAGGTACGGATGTGGGCCATTTATCAGTATGGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR TCA 72 bp | TCTTCTGTGGTAACAACTAGACATGCTTCCAAGCTTTaGAAATTATTGTCTGGACCATACCAGAAAATACTG | + |
|
Preference number: 3 (lower is better) Translates to: SSVVTTRHASKL*KLLSGPYQKIL Trigger: CAGTATTTTCTGGTATGGTCCAGACAATAATTTTCAAAGCTTGGAAGCATGTCTAGTTGTTACCACAGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR TCA 72 bp | TCTTATTCGGGTGTCTACGTATCTCATTACTTATGGTaGCTTACGTTCTTCAACATGATTTTCTCCATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SYSGVYVSHYLW*LTFFNMIFSMK Trigger: TTTCATGGAGAAAATCATGTTGAAGAACGTAAGTCACCATAAGTAATGAGATACGTAGACACCCGAATAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR TCA 90 bp | CTGATGCTCACGGCACACTGGACCACAACGTGGAAAAGGGGCACACACAGACAGTCAGGTCTGCCCAGGTaGCATTGTGCGGAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LMLTAHWTTTWKRGTHRQSGLPR*HCAEAK Trigger: TTTGGCTTCCGCACAATGTCACCTGGGCAGACCTGA...CTGTCTGTGTGTGCCCCTTTTCCACGTTGTGGTCCAGTGTGCCGTGAGCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACGCCCAGGTGACATTGTaGGGAAGCCAAAACCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TCRCIPVTWHWWESQCTHAQVTL*GSQNRS Trigger: CGAGCGGTTTTGGCTTCCGCACAATGTCACCTGGGC...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR GCA 90 bp | CTGATGCTCACGGCACACTGGACCACAACGTGGAAAAGGGGCACACACAGACAGCGTGTTCTTCAGGTCTaGCCAGGTGACATTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LMLTAHWTTTWKRGTHRQRVLQV*PGDIVR Trigger: CCGCACAATGTCACCTGGGCAGACCTGAAGAACACG...CTGTCTGTGTGTGCCCCTTTTCCACGTTGTGGTCCAGTGTGCCGTGAGCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | CTGATGCTCACGGCACACTGGACCACAACGTGGAAAAGGGGCACACACAGACAGACCTGGTCAGAGTGCTaGGTTTCTCCTGGTTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LMLTAHWTTTWKRGTHRQTWSEC*VSPGCV Trigger: GACGCAACCAGGAGAAACCCAGCACTCTGACCAGGT...CTGTCTGTGTGTGCCCCTTTTCCACGTTGTGGTCCAGTGTGCCGTGAGCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 72 bp | TCTCAATGCACGCACCTGCCGATGCATTCCTGTCACTaGGCATTGGTGGGAGTCTCAATGCACGCACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQCTHLPMHSCH*ALVGVSMHAPA Trigger: GGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGTGCGTGCATTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 72 bp | TCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTaGGCATTGGTGGGAGTCTCAATGCACGCACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQCTHLPMHSCH*ALVGVSMHAPA Trigger: GGCAGGTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTTCTTGGTCCGTGCCTTTGCTGCCTTGTTCATCAGCATTGGACGCCAATGGCATCGGCTGAGTCGTaGAGACAGAGGACCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VFLGPCLCCLVHQHWTPMASAES*RQRTRV Trigger: AACCCTGGTCCTCTGTCTTCACGACTCAGCCGATGC...CATTGGCGTCCAATGCTGATGAACAAGGCAGCAAAGGCACGGACCAAGAAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR GCA 90 bp | CATTGGTGGGAGTCTCAATGCACGCACCTGCCCATGCATTCCTGTCACTTGGCAAGAACCTGGTCAGAGTaGTGGGTTTCTCCTGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HWWESQCTHLPMHSCHLARTWSE*WVSPGC Trigger: GCAACCAGGAGAAACCCAGCACTCTGACCAGGTTCT...TGCCAAGTGACAGGAATGCATGGGCAGGTGCGTGCATTGAGACTCCCACCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | GCACACCCTCTCCCACCTCCTGAAAATGGCACCAGACAGAGAAGAAGGGATGGGGTGCTGGGTTTCTCCTaGTTGCGTCTTTGTCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AHPLPPPENGTRQRRRDGVLGFS*LRLCRN Trigger: GTTTCGACAAAGACGCAACCAGGAGAAACCCAGCAC...CCCATCCCTTCTTCTCTGTCTGGTGCCATTTTCAGGAGGTGGGAGAGGGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 72 bp | AATGCACGCACCTGCCGATGCTTCCTGTCAAAGGCTTaGGGATGCATCAAGTCACAAAAGCCTGCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NARTCRCFLSKA*GCIKSQKPAGG Trigger: GCCTCCTGCAGGCTTTTGTGACTTGATGCATCCCAAAGCCTTTGACAGGAAGCATCGGCAGGTGCGTGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | TCGTTCTCTCAGAAGAACTGGTCAACACAGACTCAGGGGAGCTCCAATGTCCTTCCGCCTGCGGAAAGGTaGCTTCCTCCGTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFSQKNWSTQTQGSSNVLPPAER*LPPCSS Trigger: TGAAGAACACGGAGGAAGCCACCTTTCCGCAGGCGG...AAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | GCACACCCTCTCCCACCTCCTGAAAATGGCACCAGACAGAGAAGAAGGGATGGGGAGGGCTATGGCACATaGTTTGGCTATGAATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AHPLPPPENGTRQRRRDGEGYGT*FGYESL Trigger: GAGAGATTCATAGCCAAACCATGTGCCATAGCCCTC...CCCATCCCTTCTTCTCTGTCTGGTGCCATTTTCAGGAGGTGGGAGAGGGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | CTGATGCTCACGGCACACTGGACCACAACGTGGAAAAGGGGCACACACAGACAGAGAATGGCATTTGGCTaGGCAGTTTGTGGTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LMLTAHWTTTWKRGTHRQRMAFG*AVCGPL Trigger: CAATGGACCACAAACTGCCCAGCCAAATGCCATTCT...CTGTCTGTGTGTGCCCCTTTTCCACGTTGTGGTCCAGTGTGCCGTGAGCATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTTCTTGGTCCGTGCCTTTGCTGCCTTGTTCATCAGCATTGGACGCCAATGTGTCGAAACCAGCGTTaGATGCTCCGAACATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFLGPCLCCLVHQHWTPMCRNQR*MLRTSQ Trigger: CTGGGATGTTCGGAGCATTCAACGCTGGTTTCGACA...CATTGGCGTCCAATGCTGATGAACAAGGCAGCAAAGGCACGGACCAAGAAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR GCA 90 bp | CTGATGCTCACGGCACACTGGACCACAACGTGGAAAAGGGGCACACACAGACAGAGGAAAATCTCCACATaGTCTCACAGAACCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LMLTAHWTTTWKRGTHRQRKIST*SHRTWS Trigger: TGACCAGGTTCTGTGAGAGCATGTGGAGATTTTCCT...CTGTCTGTGTGTGCCCCTTTTCCACGTTGTGGTCCAGTGTGCCGTGAGCATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR TCA 90 bp | ACACCTGGTTCACCCTGTTTAGACTCACGTGGGGCAATGGTCACCAACTGTATGTCCGTTGGTGGTTGTTaGAGAGTGTGGTTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TPGSPCLDSRGAMVTNCMSVGGC*RVWFLP Trigger: GGGAAGAAACCACACTCTTCAACAACCACCAACGGA...CATACAGTTGGTGACCATTGCCCCACGTGAGTCTAAACAGGGTGAACCAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 72 bp | AGTCCTTTCTACACACACTTTGGTACCCTGGGGAGTTaGGATGCAACCAGGAAGGAGGAGACATCACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SPFYTHFGTLGS*DATRKEETSPQ Trigger: TTGTGGTGATGTCTCCTCCTTCCTGGTTGCATCCAAACTCCCCAGGGTACCAAAGTGTGTGTAGAAAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR GCA 90 bp | ACGTGGGGCAATGGTCACCAACTGTATGGGCAAATAGAAAATGGGTGCAGAACAACATCCCAGTCCAGCTaGTTGGAGAGCCCTTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TWGNGHQLYGQIENGCRTTSQSS*LESPSN Trigger: ATTAGAAGGGCTCTCCAAGCAGCTGGACTGGGATGT...TGTTCTGCACCCATTTTCTATTTGCCCATACAGTTGGTGACCATTGCCCCACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | ACACCTGGTTCACCCTGTTTAGACTCACGTGGGGCAATGGTCACCAACTGTATGAAACCTTTTCCAGAATaGCATTTGGCTGGGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPGSPCLDSRGAMVTNCMKPFPE*HLAGQF Trigger: AAACTGCCCAGCCAAATGCCATTCTGGAAAAGGTTT...CATACAGTTGGTGACCATTGCCCCACGTGAGTCTAAACAGGGTGAACCAGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | TCGTTCTCTCAGAAGAACTGGTCAACACAGACTCAGGGGAGCTCCAATGTCCTTCGTAATTTGCCATTTTaGCAGCCTCTAGCAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFSQKNWSTQTQGSSNVLRNLPF*QPLAEH Trigger: ATGCTCTGCTAGAGGCTGCCAAAATGGCAAATTACG...AAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACCTCTTTTCATCAGGATaGTTTGTTATAGCAGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TCRCIPVTWHWWESQCTHLFSSG*FVIAVK Trigger: TTTCACTGCTATAACAAAGCATCCTGATGAAAAGAG...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACTTGATATCTGTGAACTaGGAAACCATTAAAGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TCRCIPVTWHWWESQCTHLISVN*ETIKDQ Trigger: TTGGTCTTTAATGGTTTCCCAGTTCACAGATATCAA...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTTAACCCATTGGTACCGCTaGTTCCGTTGGTGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEGGDITTSYANYQNHHLTHWYR*FRWWLL Trigger: CAACAACCACCAACGGAACCAGCGGTACCAATGGGT...TAAGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTTATTCCAGAATGGCATTTaGCTGGGCAGTTTGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QEGGDITTSYANYQNHHLFQNGI*LGSLWS Trigger: GGACCACAAACTGCCCAGCCAAATGCCATTCTGGAA...TAAGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTTATGCTCTCACAGAACCTaGTCAGAGTGCTGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QEGGDITTSYANYQNHHLCSHRT*SECWVS Trigger: AGAAACCCAGCACTCTGACCAGGTTCTGTGAGAGCA...TAAGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 72 bp | AGAGTGTCACATGGTTCAAATACAAGTACACAGTGGTaGTCAAAACCATCTCATACCTGGGAGGATGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVSHGSNTSTQW*SKPSHTWEDEP Trigger: GGGCTCATCCTCCCAGGTATGAGATGGTTTTGACAACCACTGTGTACTTGTATTTGAACCATGTGACACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 72 bp | AAAGGGCCAGCACTTAACTTCTTATTTCCAAAGGTGTaGCGGCCTCTCTGGGTTAATGACATCATCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGPALNFLFPKV*RPLWVNDIISH Trigger: ATGGGAGATGATGTCATTAACCCAGAGAGGCCGCAACACCTTTGGAAATAAGAAGTTAAGTGCTGGCCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTTCTTGGTCCGTGCCTTTGCTGCCTTGTTCATCAGCATTGGACGCCAATGAACTTTCAAATAATGTaGTATTCAACACCCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VFLGPCLCCLVHQHWTPMNFQIM*YSTPRE Trigger: CTCTCTGGGTGTTGAATACCACATTATTTGAAAGTT...CATTGGCGTCCAATGCTGATGAACAAGGCAGCAAAGGCACGGACCAAGAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGTCAGTTACATACAGCATGCCTACATAGAAATAATGGATTTCTTCATTAGTGAAGGTCAGCTGTaGGTGGCTGGTAAGGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCVSYIQHAYIEIMDFFISEGQL*VAGKGS Trigger: ACTACCCTTACCAGCCACTCACAGCTGACCTTCACT...AATGAAGAAATCCATTATTTCTATGTAGGCATGCTGTATGTAACTGACACAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | CTTTGTTACCAACATAGTCAACCCCCGACAACCTACCACAGAAAAGAAGTCTCAAAAATTGTTGCAAGGTaGTGCAGGAACATAATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LCYQHSQPPTTYHRKEVSKIVAR*CRNIMP Trigger: CGGCATTATGTTCCTGCACCACCTTGCAACAATTTT...TGAGACTTCTTTTCTGTGGTAGGTTGTCGGGGGTTGACTATGTTGGTAACAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 72 bp | CAGCATTGGACGCCAATGACACAATCTAATGATAATTaGGGATATGCTCTGTCTGGCAGTTCAGCAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: QHWTPMTQSNDN*GYALSGSSADI Trigger: AATGTCTGCTGAACTGCCAGACAGAGCATATCCCAAATTATCATTAGATTGTGTCATTGGCGTCCAATGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 72 bp | GTGATTGGTAGACTATTGCTAATTAGCTCACAGCATTaGGAGAATGGCACAATCTCACCTCTGGAAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VIGRLLLISSQH*ENGTISPLEEK Trigger: CTTCTCTTCCAGAGGTGAGATTGTGCCATTCTCCAAATGCTGTGAGCTAATTAGCAATAGTCTACCAATCAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR TCA 90 bp | ACCAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTCTCGGGCCATGTTGTTaGCATATGAAAAGGTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: TRKEETSPQAMLITKITTLGPCC*HMKRLL Trigger: TAATAACCTTTTCATATGTCAACAACATGGCCCGAG...AGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGTCAGTTACATACAGCATGCCTACATAGAAATAATGGATTTCTTCATTGAAACCAGCGTTGAATaGTCCGAACATCCCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCVSYIQHAYIEIMDFFIETSVE*SEHPSP Trigger: TGGACTGGGATGTTCGGAGCATTCAACGCTGGTTTC...AATGAAGAAATCCATTATTTCTATGTAGGCATGCTGTATGTAACTGACACAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGTCAGTTACATACAGCATGCCTACATAGAAATAATGGATTTCTTCATTTGGGTTTCTCCTGGTTaGGTCTTTGTCGAAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCVSYIQHAYIEIMDFFIWVSPG*VFVETS Trigger: GCTGGTTTCGACAAAGACGCAACCAGGAGAAACCCA...AATGAAGAAATCCATTATTTCTATGTAGGCATGCTGTATGTAACTGACACAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGTCAGTTACATACAGCATGCCTACATAGAAATAATGGATTTCTTCATTTGTGGTCCATTGGCTTaGATGTTGAGGGCTATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PCVSYIQHAYIEIMDFFICGPLA*MLRAMA Trigger: TGCCATAGCCCTCAACATCCAAGCCAATGGACCACA...AATGAAGAAATCCATTATTTCTATGTAGGCATGCTGTATGTAACTGACACAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGTCAGTTACATACAGCATGCCTACATAGAAATAATGGATTTCTTCATTAAACCACGGCAAACATaGCAAACAGGAGATCACACA | + |
|
Preference number: 4 (lower is better) Translates to: PCVSYIQHAYIEIMDFFIKPRQT*QTGDHT Trigger: TGTGTGATCTCCTGTTTGTCATGTTTGCCGTGGTTT...AATGAAGAAATCCATTATTTCTATGTAGGCATGCTGTATGTAACTGACACAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGTCAGTTACATACAGCATGCCTACATAGAAATAATGGATTTCTTCATTATTGTTGCAAGGTGGTaGAGGAACATAATGCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PCVSYIQHAYIEIMDFFIIVARW*RNIMPK Trigger: CTTCGGCATTATGTTCCTGCACCACCTTGCAACAAT...AATGAAGAAATCCATTATTTCTATGTAGGCATGCTGTATGTAACTGACACAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 72 bp | GCAGACATTAGAACCATGGGGTTAAATGGCAATCACTaGCACTTTTACAATGAATACTCGAATGACCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ADIRTMGLNGNH*HFYNEYSNDPQ Trigger: TTGTGGGTCATTCGAGTATTCATTGTAAAAGTGCAAGTGATTGCCATTTAACCCCATGGTTCTAATGTCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 72 bp | CTTCAACATGATTTTCTCCATGAAAAGTGGCTGCTTTaGAGTATTGGTGGTTACAGGAGTTTCAAGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQHDFLHEKWLL*SIGGYRSFKSF Trigger: AAAGCTCTTGAAACTCCTGTAACCACCAATACTCAAAAGCAGCCACTTTTCATGGAGAAAATCATGTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGTCAGTTACATACAGCATGCCTACATAGAAATAATGGATTTCTTCATTGGATACCTTGCCTTTTaGAACAGTTTTGCAAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PCVSYIQHAYIEIMDFFIGYLAF*NSFASY Trigger: ATAGCTTGCAAAACTGTTTCAAAAGGCAAGGTATCC...AATGAAGAAATCCATTATTTCTATGTAGGCATGCTGTATGTAACTGACACAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| 3UTR CAA 72 bp | ACTCAATCAAGTTTCACTCCTAGACATATAACTGTTTaGGCTAATATATCAGCAAGGCTCAAATCACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQSSFTPRHITV*ANISARLKSHS Trigger: ACTGTGTGATTTGAGCCTTGCTGATATATTAGCCAAAACAGTTATATGTCTAGGAGTGAAACTTGATTGAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS GCA 90 bp | GTCCTCCGCCTGCGGAAAGGTGGCTTCCTCCGTGTTCTTCAGGTCTaGCCAGGTGACATTGTGCGGAAGCCAAAACCGCTCGTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VLRLRKGGFLRVLQV*PGDIVRKPKPLVPE Trigger: TTCTGGAACGAGCGGTTTTGGCTTCCGCACAATGTCACCTGGGCAGACCTGAAGAACACGGAGGAAGCCACCTTTCCGCAGGCGGAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
||
| CDS-3UTR CAA 90 bp | CTGATGCTCACGGCACACTGGACCACAACGTGGAAAAGGGGCACACACAGACAGTTGTGGTCCATTGGCTaGGATGTTGAGGGCTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LMLTAHWTTTWKRGTHRQLWSIG*DVEGYG Trigger: GCCATAGCCCTCAACATCCAAGCCAATGGACCACAA...CTGTCTGTGTGTGCCCCTTTTCCACGTTGTGGTCCAGTGTGCCGTGAGCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGCTCACGGCACACTGGACCACAACGTGGAAAAGGGGCACACACAGACAGTTGTCGAAACCAGCGTaGAATGCTCCGAACATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LMLTAHWTTTWKRGTHRQLSKPA*NAPNIP Trigger: TGGGATGTTCGGAGCATTCAACGCTGGTTTCGACAA...CTGTCTGTGTGTGCCCCTTTTCCACGTTGTGGTCCAGTGTGCCGTGAGCATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CAA 90 bp | GCACACCCTCTCCCACCTCCTGAAAATGGCACCAGACAGAGAAGAAGGGATGGGTATACCAGCAGTGTCTaGTATTCCACAACCAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AHPLPPPENGTRQRRRDGYTSSV*YSTTKG Trigger: CCCCTTGGTTGTGGAATACAAGACACTGCTGGTATA...CCCATCCCTTCTTCTCTGTCTGGTGCCATTTTCAGGAGGTGGGAGAGGGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGCTCACGGCACACTGGACCACAACGTGGAAAAGGGGCACACACAGACAGTCACTCCGGTCATCCTaGGATACCTTGCCTTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LMLTAHWTTTWKRGTHRQSLRSS*DTLPFE Trigger: TTCAAAAGGCAAGGTATCCAAGGATGACCGGAGTGA...CTGTCTGTGTGTGCCCCTTTTCCACGTTGTGGTCCAGTGTGCCGTGAGCATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGCTCACGGCACACTGGACCACAACGTGGAAAAGGGGCACACACAGACAGTTCCGTTGGTGGTTGTaGAAGAGTGTGGTTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LMLTAHWTTTWKRGTHRQFRWWL*KSVVSS Trigger: GGAAGAAACCACACTCTTCAACAACCACCAACGGAA...CTGTCTGTGTGTGCCCCTTTTCCACGTTGTGGTCCAGTGTGCCGTGAGCATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS GCA 90 bp | ACATGCTCTCACAGAACCTGGTCAGAGTGCTGGGTTTCTCCTGGTTaGGTCTTTGTCGAAACCAGCGTTGAATGCTCCGAACATCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TCSHRTWSECWVSPG*VFVETSVECSEHPS Trigger: ACTGGGATGTTCGGAGCATTCAACGCTGGTTTCGACAAAGACGCAACCAGGAGAAACCCAGCACTCTGACCAGGTTCTGTGAGAGCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
||
| CDS-3UTR CAA 90 bp | CTGATGCTCACGGCACACTGGACCACAACGTGGAAAAGGGGCACACACAGACAGCCGAAGTCCTTCCTTTaGATATCTGTGAACTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LMLTAHWTTTWKRGTHRQPKSFL*ISVNWE Trigger: TTCCCAGTTCACAGATATCAAAAGGAAGGACTTCGG...CTGTCTGTGTGTGCCCCTTTTCCACGTTGTGGTCCAGTGTGCCGTGAGCATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CAA 90 bp | ACACCTGGTTCACCCTGTTTAGACTCACGTGGGGCAATGGTCACCAACTGTATGTTTCCAGAATGGCATTaGGCTGGGCAGTTTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TPGSPCLDSRGAMVTNCMFPEWH*AGQFVV Trigger: GACCACAAACTGCCCAGCCAAATGCCATTCTGGAAA...CATACAGTTGGTGACCATTGCCCCACGTGAGTCTAAACAGGGTGAACCAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CAA 90 bp | ACGTGGGGCAATGGTCACCAACTGTATGGGCAAATAGAAAATGGGTGCAGAACATCCCAGTCCAGCTGCTaGGAGAGCCCTTCTAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: TWGNGHQLYGQIENGCRTSQSSC*ESPSNL Trigger: GAGATTAGAAGGGCTCTCCAAGCAGCTGGACTGGGA...TGTTCTGCACCCATTTTCTATTTGCCCATACAGTTGGTGACCATTGCCCCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGCTCACGGCACACTGGACCACAACGTGGAAAAGGGGCACACACAGACAGGAAATTTGGCGTAATTaGCCATTTTGGCAGCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LMLTAHWTTTWKRGTHRQEIWRN*PFWQPL Trigger: TAGAGGCTGCCAAAATGGCAAATTACGCCAAATTTC...CTGTCTGTGTGTGCCCCTTTTCCACGTTGTGGTCCAGTGTGCCGTGAGCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS CCA 90 bp | AGCAGTGAAAACCTTTTCCAGAATGGCATTTGGCTGGGCAGTTTGTaGTCCATTGGCTTGGATGTTGAGGGCTATGGCACATGGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSENLFQNGIWLGSL*SIGLDVEGYGTWFG Trigger: GCCAAACCATGTGCCATAGCCCTCAACATCCAAGCCAATGGACCACAAACTGCCCAGCCAAATGCCATTCTGGAAAAGGTTTTCACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTTCTGCCCAGGTGACATaGTGCGGAAGCCAAAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: TRKEETSPQAMLITKITTSAQVT*CGSQNR Trigger: GCGGTTTTGGCTTCCGCACAATGTCACCTGGGCAGA...AGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CAA 90 bp | ACACCTGGTTCACCCTGTTTAGACTCACGTGGGGCAATGGTCACCAACTGTATGTGGTTCCGTTGGTGGTaGTTGAAGAGTGTGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TPGSPCLDSRGAMVTNCMWFRWW*LKSVVS Trigger: AGAAACCACACTCTTCAACAACCACCAACGGAACCA...CATACAGTTGGTGACCATTGCCCCACGTGAGTCTAAACAGGGTGAACCAGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS GCA 90 bp | GGTAAAAGGAAAATCTCCACATGCTCTCACAGAACCTGGTCAGAGTaGTGGGTTTCTCCTGGTTGCGTCTTTGTCGAAACCAGCGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GKRKISTCSHRTWSE*WVSPGCVFVETSVE Trigger: TTCAACGCTGGTTTCGACAAAGACGCAACCAGGAGAAACCCAGCACTCTGACCAGGTTCTGTGAGAGCATGTGGAGATTTTCCTTTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
||
| CDS CCA 90 bp | AAAAGGAAAATCTCCACATGCTCTCACAGAACCTGGTCAGAGTGCTaGGTTTCTCCTGGTTGCGTCTTTGTCGAAACCAGCGTTGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: KRKISTCSHRTWSEC*VSPGCVFVETSVEC Trigger: GCATTCAACGCTGGTTTCGACAAAGACGCAACCAGGAGAAACCCAGCACTCTGACCAGGTTCTGTGAGAGCATGTGGAGATTTTCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGCCGATGCATTCCTGTCACTTGGCATTGGTGGGAGTCTCAATGCACGCACAGGTTATTAAGAAAATaGTTGCAAGGTGGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TCRCIPVTWHWWESQCTHRLLRK*LQGGAG Trigger: TCCTGCACCACCTTGCAACAATTTTCTTAATAACCT...GTGCGTGCATTGAGACTCCCACCAATGCCAAGTGACAGGAATGCATCGGCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CAA 90 bp | CTTTGTTACCAACATAGTCAACCCCCGACAACCTACCACAGAAAAGAAGTCTCAGCAGTTTGTGGTCCATaGGCTTGGATGTTGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LCYQHSQPPTTYHRKEVSAVCGP*AWMLRA Trigger: AGCCCTCAACATCCAAGCCAATGGACCACAAACTGC...TGAGACTTCTTTTCTGTGGTAGGTTGTCGGGGGTTGACTATGTTGGTAACAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS CCA 90 bp | TGCTTTGTTATAGCAGTGAAAACCTTTTCCAGAATGGCATTTGGCTaGGCAGTTTGTGGTCCATTGGCTTGGATGTTGAGGGCTATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CFVIAVKTFSRMAFG*AVCGPLAWMLRAMA Trigger: TGCCATAGCCCTCAACATCCAAGCCAATGGACCACAAACTGCCCAGCCAAATGCCATTCTGGAAAAGGTTTTCACTGCTATAACAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
||
| CDS CCA 90 bp | ACAGGAGATCACACATTTTCTGAAATTTGGCGTAATTTGCCATTTTaGCAGCCTCTAGCAGAGCATCGGCTGAGTCGTGAAGACAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TGDHTFSEIWRNLPF*QPLAEHRLSREDRG Trigger: TCCTCTGTCTTCACGACTCAGCCGATGCTCTGCTAGAGGCTGCCAAAATGGCAAATTACGCCAAATTTCAGAAAATGTGTGATCTCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGTTACCAACATAGTCAACCCCCGACAACCTACCACAGAAAAGAAGTCTCACTCCTGGTTGCGTCTTaGTCGAAACCAGCGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LCYQHSQPPTTYHRKEVSLLVAS*SKPALN Trigger: ATTCAACGCTGGTTTCGACAAAGACGCAACCAGGAG...TGAGACTTCTTTTCTGTGGTAGGTTGTCGGGGGTTGACTATGTTGGTAACAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTTACTGGGTTTCTCCTGGTaGCGTCTTTGTCGAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QEGGDITTSYANYQNHHLLGFSW*RLCRNQ Trigger: CTGGTTTCGACAAAGACGCAACCAGGAGAAACCCAG...TAAGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CAA 90 bp | TCGTTCTCTCAGAAGAACTGGTCAACACAGACTCAGGGGAGCTCCAATGTCCTTTCATCCTTGGATACCTaGCCTTTTGAAACAGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFSQKNWSTQTQGSSNVLSSLDT*PFETVL Trigger: CAAAACTGTTTCAAAAGGCAAGGTATCCAAGGATGA...AAGGACATTGGAGCTCCCCTGAGTCTGTGTTGACCAGTTCTTCTGAGAGAACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS-3UTR CAA 90 bp | ACCAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTCCTACTCGGGCCATGTaGTTGACATATGAAAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TRKEETSPQAMLITKITTPTRAM*LTYEKV Trigger: AACCTTTTCATATGTCAACAACATGGCCCGAGTAGG...AGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
||
| CDS TCA 90 bp | AATAAAATGACAGCTCCAGGATGTAATAGTAGTGAAGGTCAGCTGTaGGTGGCTGGTAAGGGTAGTTATACCAGCAGTGTCTTGTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: NKMTAPGCNSSEGQL*VAGKGSYTSSVLYS Trigger: GGAATACAAGACACTGCTGGTATAACTACCCTTACCAGCCACTCACAGCTGACCTTCACTACTATTACATCCTGGAGCTGTCATTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGTTACCAACATAGTCAACCCCCGACAACCTACCACAGAAAAGAAGTCTCATTATTAAGAAAATTGTaGCAAGGTGGTGCAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LCYQHSQPPTTYHRKEVSLLRKL*QGGAGT Trigger: TGTTCCTGCACCACCTTGCAACAATTTTCTTAATAA...TGAGACTTCTTTTCTGTGGTAGGTTGTCGGGGGTTGACTATGTTGGTAACAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| CDS-3UTR CAA 90 bp | CAGGAAGGAGGAGACATCACCACAAGCTATGCTAATTACCAAAATCACCACTTAACTCGGGCCATGTTGTaGACATATGAAAAGGTTATT | + |
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Preference number: 5 (lower is better) Translates to: QEGGDITTSYANYQNHHLTRAML*TYEKVI Trigger: AATAACCTTTTCATATGTCAACAACATGGCCCGAGT...TAAGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCTTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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| CDS GCA 72 bp | CTGCGGAAAGGTGGCTTCCTCCGTGTTCTTCAGGTCTaGCCAGGTGACATTGTGCGGAAGCCAAAACCGCTC | + |
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Preference number: 6 (lower is better) Translates to: LRKGGFLRVLQV*PGDIVRKPKPL Trigger: GAGCGGTTTTGGCTTCCGCACAATGTCACCTGGGCAGACCTGAAGAACACGGAGGAAGCCACCTTTCCGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS TCA 72 bp | ATTTTGGCAGCCTCTAGCAGAGCATCGGCTGAGTCGTaGAGACAGAGGACCAGGGTTCCTACTCGGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: ILAASSRASAES*RQRTRVPTRAM Trigger: CATGGCCCGAGTAGGAACCCTGGTCCTCTGTCTTCACGACTCAGCCGATGCTCTGCTAGAGGCTGCCAAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 72 bp | GCTTCCTCCGTGTTCTTCAGGTCTGCCCAGGTGACATaGTGCGGAAGCCAAAACCGCTCGTTCCAGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: ASSVFFRSAQVT*CGSQNRSFQNQ Trigger: CTGGTTCTGGAACGAGCGGTTTTGGCTTCCGCACAATGTCACCTGGGCAGACCTGAAGAACACGGAGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 72 bp | GGAGGTACCCATTGGTACCGCTGGTTCCGTTGGTGGTaGTTGAAGAGTGTGGTTTCTTCCCTGGAGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GGTHWYRWFRWW*LKSVVSSLEAL Trigger: CAGAGCCTCCAGGGAAGAAACCACACTCTTCAACAACCACCAACGGAACCAGCGGTACCAATGGGTACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 90 bp | CTCACAGAACCTGGTCAGAGTGCTGGGTTTCTCCTGGTTGCGTCTTaGTCGAAACCAGCGTTGAATGCTCCGAACATCCCAGTCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LTEPGQSAGFLLVAS*SKPALNAPNIPVQL Trigger: CAGCTGGACTGGGATGTTCGGAGCATTCAACGCTGGTTTCGACAAAGACGCAACCAGGAGAAACCCAGCACTCTGACCAGGTTCTGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 72 bp | CCTGGTCAGAGTGCTGGGTTTCTCCTGGTTGCGTCTTaGTCGAAACCAGCGTTGAATGCTCCGAACATCCCA | + |
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Preference number: 6 (lower is better) Translates to: PGQSAGFLLVAS*SKPALNAPNIP Trigger: TGGGATGTTCGGAGCATTCAACGCTGGTTTCGACAAAGACGCAACCAGGAGAAACCCAGCACTCTGACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS GCA 72 bp | CACAGAACCTGGTCAGAGTGCTGGGTTTCTCCTGGTTaGGTCTTTGTCGAAACCAGCGTTGAATGCTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: HRTWSECWVSPG*VFVETSVECSE Trigger: TTCGGAGCATTCAACGCTGGTTTCGACAAAGACGCAACCAGGAGAAACCCAGCACTCTGACCAGGTTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CCA 72 bp | ATCTCCACATGCTCTCACAGAACCTGGTCAGAGTGCTaGGTTTCTCCTGGTTGCGTCTTTGTCGAAACCAGC | + |
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Preference number: 6 (lower is better) Translates to: ISTCSHRTWSEC*VSPGCVFVETS Trigger: GCTGGTTTCGACAAAGACGCAACCAGGAGAAACCCAGCACTCTGACCAGGTTCTGTGAGAGCATGTGGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 72 bp | CCATTGGCTTGGATGTTGAGGGCTATGGCACATGGTTaGGCTATGAATCTCTCGAAGATGAGCCGCACCATG | + |
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Preference number: 6 (lower is better) Translates to: PLAWMLRAMAHG*AMNLSKMSRTM Trigger: CATGGTGCGGCTCATCTTCGAGAGATTCATAGCCAAACCATGTGCCATAGCCCTCAACATCCAAGCCAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 72 bp | TCCAGAATGGCATTTGGCTGGGCAGTTTGTGGTCCATaGGCTTGGATGTTGAGGGCTATGGCACATGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SRMAFGWAVCGP*AWMLRAMAHGL Trigger: CAAACCATGTGCCATAGCCCTCAACATCCAAGCCAATGGACCACAAACTGCCCAGCCAAATGCCATTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS GCA 72 bp | AAAATCTCCACATGCTCTCACAGAACCTGGTCAGAGTaGTGGGTTTCTCCTGGTTGCGTCTTTGTCGAAACC | + |
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Preference number: 6 (lower is better) Translates to: KISTCSHRTWSE*WVSPGCVFVET Trigger: GGTTTCGACAAAGACGCAACCAGGAGAAACCCAGCACTCTGACCAGGTTCTGTGAGAGCATGTGGAGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CCA 72 bp | AACCTTTTCCAGAATGGCATTTGGCTGGGCAGTTTGTaGTCCATTGGCTTGGATGTTGAGGGCTATGGCACA | + |
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Preference number: 6 (lower is better) Translates to: NLFQNGIWLGSL*SIGLDVEGYGT Trigger: TGTGCCATAGCCCTCAACATCCAAGCCAATGGACCACAAACTGCCCAGCCAAATGCCATTCTGGAAAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 72 bp | AATGGCATTTGGCTGGGCAGTTTGTGGTCCATTGGCTaGGATGTTGAGGGCTATGGCACATGGTTTGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: NGIWLGSLWSIG*DVEGYGTWFGY Trigger: ATAGCCAAACCATGTGCCATAGCCCTCAACATCCAAGCCAATGGACCACAAACTGCCCAGCCAAATGCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 72 bp | GAAAACCTTTTCCAGAATGGCATTTGGCTGGGCAGTTaGTGGTCCATTGGCTTGGATGTTGAGGGCTATGGC | + |
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Preference number: 6 (lower is better) Translates to: ENLFQNGIWLGS*WSIGLDVEGYG Trigger: GCCATAGCCCTCAACATCCAAGCCAATGGACCACAAACTGCCCAGCCAAATGCCATTCTGGAAAAGGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 90 bp | AGAATGGCATTTGGCTGGGCAGTTTGTGGTCCATTGGCTTGGATGTaGAGGGCTATGGCACATGGTTTGGCTATGAATCTCTCGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: RMAFGWAVCGPLAWM*RAMAHGLAMNLSKM Trigger: CATCTTCGAGAGATTCATAGCCAAACCATGTGCCATAGCCCTCAACATCCAAGCCAATGGACCACAAACTGCCCAGCCAAATGCCATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 90 bp | CTTTTCCAGAATGGCATTTGGCTGGGCAGTTTGTGGTCCATTGGCTaGGATGTTGAGGGCTATGGCACATGGTTTGGCTATGAATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LFQNGIWLGSLWSIG*DVEGYGTWFGYESL Trigger: GAGAGATTCATAGCCAAACCATGTGCCATAGCCCTCAACATCCAAGCCAATGGACCACAAACTGCCCAGCCAAATGCCATTCTGGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS TCA 72 bp | ACAGCTCCAGGATGTAATAGTAGTGAAGGTCAGCTGTaGGTGGCTGGTAAGGGTAGTTATACCAGCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: TAPGCNSSEGQL*VAGKGSYTSSV Trigger: GACACTGCTGGTATAACTACCCTTACCAGCCACTCACAGCTGACCTTCACTACTATTACATCCTGGAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CCA 72 bp | GGTAAAAGGAAAATCTCCACATGCTCTCACAGAACCTaGTCAGAGTGCTGGGTTTCTCCTGGTTGCGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: GKRKISTCSHRT*SECWVSPGCVF Trigger: AAAGACGCAACCAGGAGAAACCCAGCACTCTGACCAGGTTCTGTGAGAGCATGTGGAGATTTTCCTTTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 90 bp | AAAACCTTTTCCAGAATGGCATTTGGCTGGGCAGTTTGTGGTCCATaGGCTTGGATGTTGAGGGCTATGGCACATGGTTTGGCTATGAAT | + |
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Preference number: 6 (lower is better) Translates to: KTFSRMAFGWAVCGP*AWMLRAMAHGLAMN Trigger: ATTCATAGCCAAACCATGTGCCATAGCCCTCAACATCCAAGCCAATGGACCACAAACTGCCCAGCCAAATGCCATTCTGGAAAAGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 90 bp | TATAGCAGTGAAAACCTTTTCCAGAATGGCATTTGGCTGGGCAGTTaGTGGTCCATTGGCTTGGATGTTGAGGGCTATGGCACATGGTTT | + |
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Preference number: 6 (lower is better) Translates to: YSSENLFQNGIWLGS*WSIGLDVEGYGTWF Trigger: AAACCATGTGCCATAGCCCTCAACATCCAAGCCAATGGACCACAAACTGCCCAGCCAAATGCCATTCTGGAAAAGGTTTTCACTGCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CCA 72 bp | ATAGCAGTGAAAACCTTTTCCAGAATGGCATTTGGCTaGGCAGTTTGTGGTCCATTGGCTTGGATGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: IAVKTFSRMAFG*AVCGPLAWMLR Trigger: CCTCAACATCCAAGCCAATGGACCACAAACTGCCCAGCCAAATGCCATTCTGGAAAAGGTTTTCACTGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CCA 72 bp | CACACATTTTCTGAAATTTGGCGTAATTTGCCATTTTaGCAGCCTCTAGCAGAGCATCGGCTGAGTCGTGAA | + |
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Preference number: 6 (lower is better) Translates to: HTFSEIWRNLPF*QPLAEHRLSRE Trigger: TTCACGACTCAGCCGATGCTCTGCTAGAGGCTGCCAAAATGGCAAATTACGCCAAATTTCAGAAAATGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CCA 72 bp | TGTTATAGCAGTGAAAACCTTTTCCAGAATGGCATTTaGCTGGGCAGTTTGTGGTCCATTGGCTTGGATGTT | + |
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Preference number: 6 (lower is better) Translates to: CYSSENLFQNGI*LGSLWSIGLDV Trigger: AACATCCAAGCCAATGGACCACAAACTGCCCAGCCAAATGCCATTCTGGAAAAGGTTTTCACTGCTATAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 72 bp | AGGTGGTGCAGGAACATAATGCCGAAGTCCTTCCTTTaGATATCTGTGAACTGGGAAACCATTAAAGACCAA | + |
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Preference number: 6 (lower is better) Translates to: RWCRNIMPKSFL*ISVNWETIKDQ Trigger: TTGGTCTTTAATGGTTTCCCAGTTCACAGATATCAAAAGGAAGGACTTCGGCATTATGTTCCTGCACCACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028426.9 ENSMUST00000176018.2 |
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| CDS CAA 72 bp | TCATCTGAGCTAGATTCAATGTCACTCCGGTCATCCTaGGATACCTTGCCTTTTGAAACAGTTTTGCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSELDSMSLRSS*DTLPFETVLQA Trigger: AGCTTGCAAAACTGTTTCAAAAGGCAAGGTATCCAAGGATGACCGGAGTGACATTGAATCTAGCTCAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028426.9 |
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