Pregenerated sensors for CERS5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023021Ensembl transcript IDs: ENSMUST00000023762.13, ENSMUST00000109035.11, ENSMUST00000175876.8, ENSMUST00000176248.8, ENSMUST00000176627.3, ENSMUST00000176970.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGTCTGGGCAGGAACCTGGATGCCGGAGCTGATGCAGAGGCCATaGAGGGGTACTGCTCTTAGCTTGCTCCTCATGGCTTGCTCAGGC | + |
|
Preference number: 1 (lower is better) Translates to: EVWAGTWMPELMQRP*RGTALSLLLMACSG Trigger: GCCTGAGCAAGCCATGAGGAGCAAGCTAAGAGCAGTACCCCTCCATGGCCTCTGCATCAGCTCCGGCATCCAGGTTCCTGCCCAGACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| 3UTR CCA 90 bp | GATCAGGAACCCAGAGTCTCAAGAGCCATGGGACGAGGTCACAGATaGTCTGGAGACAGCTTAATTCAAGATGCAGCCAGGGCTGGCAGT | + |
|
Preference number: 1 (lower is better) Translates to: DQEPRVSRAMGRGHR*SGDSLIQDAARAGS Trigger: ACTGCCAGCCCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCATGGCTCTTGAGACTCTGGGTTCCTGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| 3UTR CCA 90 bp | GATCAGGAACCCAGAGTCTCAAGAGCCATGGGACGAGGTCACAGATaGTCTGGAGACAGCTTAATTCAAGATGCAGCCAGGGCTGGACTT | + |
|
Preference number: 1 (lower is better) Translates to: DQEPRVSRAMGRGHR*SGDSLIQDAARAGL Trigger: AAGTCCAGCCCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCATGGCTCTTGAGACTCTGGGTTCCTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| 3UTR CCA 90 bp | ATTTGGCTTATATTTCTACAGCACTGTCCATCACAGAAGGAAGTCTaGGCAGGAACCTGGATGCCGGAGCTGATGCAGAGGCCATGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: IWLIFLQHCPSQKEV*AGTWMPELMQRPWR Trigger: CCTCCATGGCCTCTGCATCAGCTCCGGCATCCAGGTTCCTGCCCAGACTTCCTTCTGTGATGGACAGTGCTGTAGAAATATAAGCCAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| 3UTR TCA 90 bp | ATGGTCTGGAGACAGCTTAATTCAAGATGCAGCCAGGGCTGGACTTaGGGTGGGCTCAGAAGTGACCAGACAATGACTAGTAATCCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: MVWRQLNSRCSQGWT*GGLRSDQTMTSNPE Trigger: TTCTGGATTACTAGTCATTGTCTGGTCACTTCTGAGCCCACCTCAAGTCCAGCCCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| 3UTR TCA 90 bp | GCTGCCAGAGAGGTTGTTTTTGTGGGTTGTCTCATCTTCTTCCTCTaGGCTGCTCTCTACATCACTGCGGTCATCCTTAGACACATGCAA | + |
|
Preference number: 1 (lower is better) Translates to: AAREVVFVGCLIFFL*AALYITAVILRHMQ Trigger: TTGCATGTGTCTAAGGATGACCGCAGTGATGTAGAGAGCAGCTCAGAGGAAGAAGATGAGACAACCCACAAAAACAACCTCTCTGGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| 3UTR GCA 90 bp | GGTGGGCTCAGAAGTGACCAGACAATGACTAGTAATCCAGAATTGTaGCCCAACCGAGTCAATGAAACTCATTTATATGCACAATACACA | + |
|
Preference number: 1 (lower is better) Translates to: GGLRSDQTMTSNPEL*PNRVNETHLYAQYT Trigger: TGTGTATTGTGCATATAAATGAGTTTCATTGACTCGGTTGGGGCACAATTCTGGATTACTAGTCATTGTCTGGTCACTTCTGAGCCCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTCTTCAGCCAAGTGGCTGCCTCCCATGTAGCCGTTCATGCAGTTGGCACCATGGAACTGTCCAGCTaGCACCAGGCAGAGAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LLFSQVAASHVAVHAVGTMELSS*HQAEKR Trigger: TCTTTTCTCTGCCTGGTGGCAGCTGGACAGTTCCAT...GGTGCCAACTGCATGAACGGCTACATGGGAGGCAGCCACTTGGCTGAAGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAAAACTGGAGTTACGGGCAGTTTTGAGCTGCTCTTTATCGGTGCTAGAGACCGCTTTACAAGTCCCCTaGTCTTCAGCCAAGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PKLELRAVLSCSLSVLETALQVP*SSAKWL Trigger: CAGCCACTTGGCTGAAGAGCAGGGGACTTGTAAAGC...GGTCTCTAGCACCGATAAAGAGCAGCTCAAAACTGCCCGTAACTCCAGTTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCAAGTCCTGGAGCTGAGTCTGGTGACAGCACTTATTTAAGTGATCAGGAAAGCCAGGGCTGGACTTaGGGTGGGCTCAGAAGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: FSSPGAESGDSTYLSDQESQGWT*GGLRSD Trigger: GTCACTTCTGAGCCCACCTCAAGTCCAGCCCTGGCT...TTCCTGATCACTTAAATAAGTGCTGTCACCAGACTCAGCTCCAGGACTTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| 3UTR-3UTR GCA 90 bp | GCTTGCCCACTGGCCAATCTAGTTGGGAAATTTTCTCAACTAAGGTTCCCTCTTCTTCAGCCAAGTGGCTaGCTCCCATGTAGCCGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: ACPLANLVGKFSQLRFPLLQPSG*LPCSRS Trigger: TGAACGGCTACATGGGAGGCAGCCACTTGGCTGAAG...AAGAGGGAACCTTAGTTGAGAAAATTTCCCAACTAGATTGGCCAGTGGGCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTGGTGACAGCACTTCAGCCAAGTGGCTaGCTCCCATGTAGCCGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: FLLQKNNFQVLELSLVTALQPSG*LPCSRS Trigger: TGAACGGCTACATGGGAGGCAGCCACTTGGCTGAAG...TGCTGTCACCAGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTTCGTTACAGTACATGTCTGTAAGCACAGGCAGCCAAAGTGGTAGCAGGGATGCTTTACAAGTCCCCTaGTCTTCAGCCAAGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TSLQYMSVSTGSQSGSRDALQVP*SSAKWL Trigger: CAGCCACTTGGCTGAAGAGCAGGGGACTTGTAAAGC...ATCCCTGCTACCACTTTGGCTGCCTGTGCTTACAGACATGTACTGTAACGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAAAACTGGAGTTACGGGCAGTTTTGAGCTGCTCTTTATCGGTGCTAGAGACCCTTCTTCCTCTGAGCTaGTCTCTACATCACTGCGGT | + |
|
Preference number: 2 (lower is better) Translates to: PKLELRAVLSCSLSVLETLLPLS*SLHHCG Trigger: ACCGCAGTGATGTAGAGAGCAGCTCAGAGGAAGAAG...GGTCTCTAGCACCGATAAAGAGCAGCTCAAAACTGCCCGTAACTCCAGTTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATGCAGCCAGGGCGAAGTGACCAGACAATaGCTAGTAATCCAGAATTGT | + |
|
Preference number: 2 (lower is better) Translates to: GTRSQMVWRQLNSRCSQGEVTRQ*LVIQNC Trigger: ACAATTCTGGATTACTAGTCATTGTCTGGTCACTTC...GCCCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGTAATCTCAGCTCCAGTCAACAACAGTCACATACGTTAGCTGGGCGAACAACCAGGAAGTACAGCTaGAAGGAGAGCTGTTCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SGNLSSSQQQSHTLAGRTTRKYS*KESCSD Trigger: GTCTGAACAGCTCTCCTTCCAGCTGTACTTCCTGGT...TGTTCGCCCAGCTAACGTATGTGACTGTTGTTGACTGGAGCTGAGATTACCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176970.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTGGCTTATATTTCTACAGCACTGTCCATCACAGAAGGAAGTCTGGGCAGGACAACCCTGGATCCTCTaGAAGAGCAGTTTCAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: IWLIFLQHCPSQKEVWAGQPWIL*KSSFSP Trigger: TGGGCTGAAACTGCTCTTGCAGAGGATCCAGGGTTG...TCCTGCCCAGACTTCCTTCTGTGATGGACAGTGCTGTAGAAATATAAGCCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| 3UTR-3UTR TCA 90 bp | GCTTGCCCACTGGCCAATCTAGTTGGGAAATTTTCTCAACTAAGGTTCCCTCTTCAGCACTTATTTAAGTaGTCAGGAACCCAGAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: ACPLANLVGKFSQLRFPLQHLFK*SGTQSL Trigger: GAGACTCTGGGTTCCTGATCACTTAAATAAGTGCTG...AAGAGGGAACCTTAGTTGAGAAAATTTCCCAACTAGATTGGCCAGTGGGCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| 3UTR-3UTR GCA 90 bp | ATTTGGCTTATATTTCTACAGCACTGTCCATCACAGAAGGAAGTCTGGGCAGGATTTGATTCTCCTCAGTaGCTTGCAGTCCCTCTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: IWLIFLQHCPSQKEVWAGFDSPQ*LAVPLV Trigger: GACTAGAGGGACTGCAAGGCACTGAGGAGAATCAAA...TCCTGCCCAGACTTCCTTCTGTGATGGACAGTGCTGTAGAAATATAAGCCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| 3UTR-3UTR CCA 90 bp | GGTACTGCTCTTAGCTTGCTCCTCATGGCTTGCTCAGGCCGTTTTCTCATAAAAAGCAGTTTCAGCCCATaGAAAACTTCGTTACAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: GTALSLLLMACSGRFLIKSSFSP*KTSLQY Trigger: GTACTGTAACGAAGTTTTCCATGGGCTGAAACTGCT...TTTTATGAGAAAACGGCCTGAGCAAGCCATGAGGAGCAAGCTAAGAGCAGTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| 3UTR-3UTR TCA 90 bp | GCTATGTTGATCCTGGGTAGTGTTCCATCAGGTGAAATATTACTTCCTCCTCCACAGCACTTATTTAAGTaGTCAGGAACCCAGAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: AMLILGSVPSGEILLPPPQHLFK*SGTQSL Trigger: GAGACTCTGGGTTCCTGATCACTTAAATAAGTGCTG...TGGAGGAGGAAGTAATATTTCACCTGATGGAACACTACCCAGGATCAACATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCAAGTCCTGGAGCTGAGTCTGGTGACAGCACTTATTTAAGTGATCAGGAACTCATCTTCTTCCTCTaGGCTGCTCTCTACATCACT | + |
|
Preference number: 2 (lower is better) Translates to: FSSPGAESGDSTYLSDQELIFFL*AALYIT Trigger: AGTGATGTAGAGAGCAGCTCAGAGGAAGAAGATGAG...TTCCTGATCACTTAAATAAGTGCTGTCACCAGACTCAGCTCCAGGACTTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTACTGCTCTTAGCTTGCTCCTCATGGCTTGCTCAGGCCGTTTTCTCATAAAACATCAGTTAAGAAAATaGTCTATAGGCTTGCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: GTALSLLLMACSGRFLIKHQLRK*SIGLPT Trigger: AGTGGGCAAGCCTATAGAGCATTTTCTTAACTGATG...TTTTATGAGAAAACGGCCTGAGCAAGCCATGAGGAGCAAGCTAAGAGCAGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTGGTGACAGCATCATCCTTAGACACATaGAAAGGATGGAACTGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: FLLQKNNFQVLELSLVTASSLDT*KGWNCP Trigger: TGGACAGTTCCATCCTTTGCATGTGTCTAAGGATGA...TGCTGTCACCAGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCAAGTCCTGGAGCTGAGTCTGGTGACAGCACTTATTTAAGTGATCAGGAAGAAGTGACCAGACAATaGCTAGTAATCCAGAATTGT | + |
|
Preference number: 2 (lower is better) Translates to: FSSPGAESGDSTYLSDQEEVTRQ*LVIQNC Trigger: ACAATTCTGGATTACTAGTCATTGTCTGGTCACTTC...TTCCTGATCACTTAAATAAGTGCTGTCACCAGACTCAGCTCCAGGACTTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAATTGTGCCCCAACCGAGTCAATGAAACTCATTTATATGCACAATACACAACAAAAATATTTCTTTaGTTCTCCTCAGTGCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: PELCPNRVNETHLYAQYTTKIFL*FSSVPC Trigger: GCAAGGCACTGAGGAGAATCAAAGAAATATTTTTGT...TGTGTATTGTGCATATAAATGAGTTTCATTGACTCGGTTGGGGCACAATTCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| 3UTR-3UTR TCA 90 bp | GAAATATTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTACAAAAATATTTCTTTaGTTCTCCTCAGTGCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: EILLPPPKEQFSSPGAESTKIFL*FSSVPC Trigger: GCAAGGCACTGAGGAGAATCAAAGAAATATTTTTGT...AGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAATATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| 3UTR CCA 72 bp | GCAGGAACCTGGATGCCGGAGCTGATGCAGAGGCCATaGAGGGGTACTGCTCTTAGCTTGCTCCTCATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AGTWMPELMQRP*RGTALSLLLMA Trigger: AGCCATGAGGAGCAAGCTAAGAGCAGTACCCCTCCATGGCCTCTGCATCAGCTCCGGCATCCAGGTTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| 3UTR CCA 72 bp | CACTGTCCATCACAGAAGGAAGTCTGGGCAGGAACCTaGATGCCGGAGCTGATGCAGAGGCCATGGAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: HCPSQKEVWAGT*MPELMQRPWRG Trigger: ACCCCTCCATGGCCTCTGCATCAGCTCCGGCATCCAGGTTCCTGCCCAGACTTCCTTCTGTGATGGACAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| 3UTR TCA 72 bp | AGAAGGAAGTCTGGGCAGGAACCTGGATGCCGGAGCTaGTGCAGAGGCCATGGAGGGGTACTGCTCTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RRKSGQEPGCRS*CRGHGGVLLLA Trigger: AGCTAAGAGCAGTACCCCTCCATGGCCTCTGCATCAGCTCCGGCATCCAGGTTCCTGCCCAGACTTCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| 3UTR CCA 72 bp | AGAGCAGAAGGTACAGAGCCTGGGTCTAATCCCTCCTaGGAGAGCACCTTTCCCCGGCTCAAGGCTTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RAEGTEPGSNPS*ESTFPRLKALE Trigger: TTCCAAAGCCTTGAGCCGGGGAAAGGTGCTCTCCCAGGAGGGATTAGACCCAGGCTCTGTACCTTCTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| 3UTR CCA 72 bp | AGTCTCAAGAGCCATGGGACGAGGTCACAGATGGTCTaGAGACAGCTTAATTCAAGATGCAGCCAGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLKSHGTRSQMV*RQLNSRCSQGW Trigger: CCAGCCCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCATGGCTCTTGAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| 3UTR CCA 72 bp | CCCAGAGTCTCAAGAGCCATGGGACGAGGTCACAGATaGTCTGGAGACAGCTTAATTCAAGATGCAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PRVSRAMGRGHR*SGDSLIQDAAR Trigger: CCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCATGGCTCTTGAGACTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| 3UTR CCA 72 bp | ATATTTCTACAGCACTGTCCATCACAGAAGGAAGTCTaGGCAGGAACCTGGATGCCGGAGCTGATGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: IFLQHCPSQKEV*AGTWMPELMQR Trigger: CCTCTGCATCAGCTCCGGCATCCAGGTTCCTGCCCAGACTTCCTTCTGTGATGGACAGTGCTGTAGAAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| 3UTR TCA 72 bp | GCTGGACTTGAGGTGGGCTCAGAAGTGACCAGACAATaGCTAGTAATCCAGAATTGTGCCCCAACCGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: AGLEVGSEVTRQ*LVIQNCAPTES Trigger: TGACTCGGTTGGGGCACAATTCTGGATTACTAGTCATTGTCTGGTCACTTCTGAGCCCACCTCAAGTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| 3UTR CCA 72 bp | ACATCACTGCGGTCATCCTTAGACACATGCAAAGGATaGAACTGTCCAGCTGCCACCAGGCAGAGAAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TSLRSSLDTCKG*NCPAATRQRKE Trigger: CTCTTTTCTCTGCCTGGTGGCAGCTGGACAGTTCCATCCTTTGCATGTGTCTAAGGATGACCGCAGTGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTATGTTGATCCTGGGTAGTGTTCCATCAGGTGAAATATTACTTCCTCCTCCAATGCAGTTGGCACCATaGCTAGAGCTGCTGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AMLILGSVPSGEILLPPPMQLAP*LELLPE Trigger: CTCTGGCAGCAGCTCTAGCAATGGTGCCAACTGCAT...TGGAGGAGGAAGTAATATTTCACCTGATGGAACACTACCCAGGATCAACATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTCAAGAGCCATGGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAACTAGTAATCCAGAATaGTGCCCCAACCGAGTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLKSHGTRSQMVWRQLNSTSNPE*CPNRVN Trigger: ATTGACTCGGTTGGGGCACAATTCTGGATTACTAGT...TGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCATGGCTCTTGAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCAAGTCCTGGAGCTGAGTCTGGTGACAGCACTTATTTAAGTGATCAGGAAATGCAGTTGGCACCATaGCTAGAGCTGCTGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FSSPGAESGDSTYLSDQEMQLAP*LELLPE Trigger: CTCTGGCAGCAGCTCTAGCAATGGTGCCAACTGCAT...TTCCTGATCACTTAAATAAGTGCTGTCACCAGACTCAGCTCCAGGACTTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAAGAGCCATGGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATGGTTGTTTTTGTGGGTaGTCTCATCTTCTTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SRAMGRGHRWSGDSLIQDGCFCG*SHLLPL Trigger: CAGAGGAAGAAGATGAGACAACCCACAAAAACAACC...ATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCATGGCTCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| 3UTR TCA 72 bp | GAGGTTGTTTTTGTGGGTTGTCTCATCTTCTTCCTCTaGGCTGCTCTCTACATCACTGCGGTCATCCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: EVVFVGCLIFFL*AALYITAVILR Trigger: TCTAAGGATGACCGCAGTGATGTAGAGAGCAGCTCAGAGGAAGAAGATGAGACAACCCACAAAAACAACCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| 3UTR CCA 72 bp | CAACCCTGGATCCTCTGCAAGAGCAGTTTCAGCCCATaGAAAACTTCGTTACAGTACATGTCTGTAAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: QPWILCKSSFSP*KTSLQYMSVST Trigger: TGTGCTTACAGACATGTACTGTAACGAAGTTTTCCATGGGCTGAAACTGCTCTTGCAGAGGATCCAGGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| 3UTR GCA 72 bp | AGAAGTGACCAGACAATGACTAGTAATCCAGAATTGTaGCCCAACCGAGTCAATGAAACTCATTTATATGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSDQTMTSNPEL*PNRVNETHLYA Trigger: TGCATATAAATGAGTTTCATTGACTCGGTTGGGGCACAATTCTGGATTACTAGTCATTGTCTGGTCACTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR TCA 90 bp | ACGTTAGCTGGGCGAACACGTTCTAAGGCAGATGGGACCAGGAAGTACAGCTGGTCAGGAGAAGGGCATTaGAGAGCCACCAGGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLAGRTRSKADGTRKYSWSGEGH*RATRKG Trigger: ACCCTTCCTGGTGGCTCTTCAATGCCCTTCTCCTGA...CCAGCTGTACTTCCTGGTCCCATCTGCCTTAGAACGTGTTCGCCCAGCTAACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176970.8 |
||
| CDS-3UTR GCA 90 bp | GGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATGCAGCCAGGGCGCTTTACAAGTCCCCTaGTCTTCAGCCAAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTRSQMVWRQLNSRCSQGALQVP*SSAKWL Trigger: CAGCCACTTGGCTGAAGAGCAGGGGACTTGTAAAGC...GCCCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023762.13 |
||
| CDS-3UTR CCA 90 bp | GGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATGCAGCCAGGGCTTAGGTAGGACCAGATaGCATGGAGCACCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTRSQMVWRQLNSRCSQGLGRTR*HGAPAG Trigger: TCCTGCAGGTGCTCCATGCCATCTGGTCCTACCTAA...GCCCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| 3UTR CAA 72 bp | CTGATGCAGAGGCCATGGAGGGGTACTGCTCTTAGCTaGCTCCTCATGGCTTGCTCAGGCCGTTTTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LMQRPWRGTALS*LLMACSGRFLI Trigger: TATGAGAAAACGGCCTGAGCAAGCCATGAGGAGCAAGCTAAGAGCAGTACCCCTCCATGGCCTCTGCATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| CDS-3UTR TCA 90 bp | ATGGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATGCAGCCAGGGTTGGAGGCTTGTCCTaGTTCCTCCGATGGCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: MGRGHRWSGDSLIQDAARVGGLS*FLRWRN Trigger: GTTTCGCCATCGGAGGAATCAGGACAAGCCTCCAAC...CCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR TCA 90 bp | AGCCATGGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATGCAGCCATGCAGACAGAAGATaGGTGCTCCCACTCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SHGTRSQMVWRQLNSRCSHADRR*VLPLAP Trigger: TGGTGCGAGTGGGAGCACTCATCTTCTGTCTGCATG...GCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCATGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR GCA 90 bp | CTCTACATCACTGCGGTCATCCTTAGACACATGCAAAGGATGGAACTGTCCAGCGGAGAAGATGCACACTaGCAGCGGGAACACCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LYITAVILRHMQRMELSSGEDAH*QREHRQ Trigger: CTGTCGGTGTTCCCGCTGGCAGTGTGCATCTTCTCC...GCTGGACAGTTCCATCCTTTGCATGTGTCTAAGGATGACCGCAGTGATGTAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTTCAGCCAAGTGGCTGCCTCCCATGTAGCCGTTCATGCAGTTGGCACCTGGCGAAACCAGCATTaGATTTTTCGAACACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFSQVAASHVAVHAVGTWRNQH*IFRTLQ Trigger: CTGGAGTGTTCGAAAAATCCAATGCTGGTTTCGCCA...GGTGCCAACTGCATGAACGGCTACATGGGAGGCAGCCACTTGGCTGAAGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR TCA 90 bp | TTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTGGTGACGCCCAGCTCACGTTCTaGGGCAGCCAGAAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLPPPKEQFSSPGAESGDAQLTF*GSQKLS Trigger: CGAGAGCTTCTGGCTGCCTCAGAACGTGAGCTGGGC...GTCACCAGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR TCA 90 bp | CTAAAATGTAGGTTGCCAGTGGCTTTACAAGTCCCCTGCTCTTCAGCCAAGTGGTCAGGAGAAGGGCATTaGAGAGCCACCAGGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKCRLPVALQVPCSSAKWSGEGH*RATRKG Trigger: ACCCTTCCTGGTGGCTCTTCAATGCCCTTCTCCTGA...CCACTTGGCTGAAGAGCAGGGGACTTGTAAAGCCACTGGCAACCTACATTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGCAGAAGGTACAGAGCCTGGGTCTAATCCCTCCTGGGAGAGCACCTTTAGATCACAAAAAGGGTaGTACAGAGCCGCTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: ERAEGTEPGSNPSWESTFRSQKG*YRAAHV Trigger: GACGTGAGCGGCTCTGTACCACCCTTTTTGTGATCT...AAAGGTGCTCTCCCAGGAGGGATTAGACCCAGGCTCTGTACCTTCTGCTCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCACTTATTTAAGTGATCAGGAACCCAGAGTCTCAAGAGCCATGGGACGACATGCAGACAGAAGATaGGTGCTCCCACTCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: DSTYLSDQEPRVSRAMGRHADRR*VLPLAP Trigger: TGGTGCGAGTGGGAGCACTCATCTTCTGTCTGCATG...TCGTCCCATGGCTCTTGAGACTCTGGGTTCCTGATCACTTAAATAAGTGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATGCAGCCAGGCCCGGCTCAAGGCTTTaGAAGCAGTCTGGACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: MGRGHRWSGDSLIQDAARPGSRL*KQSGQL Trigger: TAATTGTCCAGACTGCTTCCAAAGCCTTGAGCCGGG...CCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR CCA 90 bp | GTACAGCTGGAAGGAGAGCTGTTCAGACAGGTGCTTCTCTCAACACTAGAAGCCCACGTCTGGCATAATTaGCCATCTTGGCAGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQLEGELFRQVLLSTLEAHVWHN*PSWQPF Trigger: GAAAGGCTGCCAAGATGGCCAATTATGCCAGACGTG...GGCTTCTAGTGTTGAGAGAAGCACCTGTCTGAACAGCTCTCCTTCCAGCTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176970.8 |
||
| CDS-3UTR TCA 90 bp | AGCCATGGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATGCAGCTTTCACAGAATTTCGTaGGCGTTGGAGGCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHGTRSQMVWRQLNSRCSFHRIS*ALEACP Trigger: AGGACAAGCCTCCAACGCTCACGAAATTCTGTGAAA...GCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCATGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR GCA 90 bp | AGTGACCAGACAATGACTAGTAATCCAGAATTGTGCCCCAACCGAGTCAATGAAGGAGAAGATGCACACTaGCAGCGGGAACACCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SDQTMTSNPELCPNRVNEGEDAH*QREHRQ Trigger: CTGTCGGTGTTCCCGCTGGCAGTGTGCATCTTCTCC...TTCATTGACTCGGTTGGGGCACAATTCTGGATTACTAGTCATTGTCTGGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR GCA 90 bp | ATGGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATGCAGCCAGGAATGCCAACACGGAGTaGACAGGGCTTGGCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: MGRGHRWSGDSLIQDAARNANTE*TGLGNK Trigger: TTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATT...CCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | AGCCATGGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATGCAGCGAATTTCGTGAGCGTTaGAGGCTTGTCCTGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHGTRSQMVWRQLNSRCSEFRER*RLVLIP Trigger: AGGAATCAGGACAAGCCTCCAACGCTCACGAAATTC...GCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCATGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATGCAGCCAGGCATAATTGGCCATCTTaGCAGCTTCCAGTAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MGRGHRWSGDSLIQDAARHNWPS*QLPVRG Trigger: ACCCCTTACTGGAAGCTGCCAAGATGGCCAATTATG...CCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | CCAAAACTGGAGTTACGGGCAGTTTTGAGCTGCTCTTTATCGGTGCTAGAGACCCACGTCTGGCATAATTaGCCATCTTGGCAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKLELRAVLSCSLSVLETHVWHN*PSWQLP Trigger: TGGAAGCTGCCAAGATGGCCAATTATGCCAGACGTG...GGTCTCTAGCACCGATAAAGAGCAGCTCAAAACTGCCCGTAACTCCAGTTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGGAGTGTAGATGTGGGGAGGCCCTAAAATGTAGGTTGCCAGTGGCTTTACACGTCTGGCATAATTaGCCATCTTGGCAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQECRCGEALKCRLPVALHVWHN*PSWQLP Trigger: TGGAAGCTGCCAAGATGGCCAATTATGCCAGACGTG...TAAAGCCACTGGCAACCTACATTTTAGGGCCTCCCCACATCTACACTCCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAATGTAGGTTGCCAGTGGCTTTACAAGTCCCCTGCTCTTCAGCCAAGTGGAGATCACAAAAAGGGTaGTACAGAGCCGCTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKCRLPVALQVPCSSAKWRSQKG*YRAAHV Trigger: GACGTGAGCGGCTCTGTACCACCCTTTTTGTGATCT...CCACTTGGCTGAAGAGCAGGGGACTTGTAAAGCCACTGGCAACCTACATTTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | GAATCTGGTAATCTCAGCTCCAGTCAACAACAGTCACATACGTTAGCTGGGCGATTAGGTAGGACCAGATaGCATGGAGCACCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESGNLSSSQQQSHTLAGRLGRTR*HGAPAG Trigger: TCCTGCAGGTGCTCCATGCCATCTGGTCCTACCTAA...TCGCCCAGCTAACGTATGTGACTGTTGTTGACTGGAGCTGAGATTACCAGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176970.8 |
||
| 3UTR CAA 72 bp | CAGTTGGCACCATTGCTAGAGCTGCTGCCAGAGAGGTaGTTTTTGTGGGTTGTCTCATCTTCTTCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLAPLLELLPER*FLWVVSSSSSE Trigger: CTCAGAGGAAGAAGATGAGACAACCCACAAAAACAACCTCTCTGGCAGCAGCTCTAGCAATGGTGCCAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| 3UTR CAA 72 bp | ACAGACAGATCCCCAAAACTGGAGTTACGGGCAGTTTaGAGCTGCTCTTTATCGGTGCTAGAGACCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDRSPKLELRAV*SCSLSVLETNP Trigger: AGGGTTGGTCTCTAGCACCGATAAAGAGCAGCTCAAAACTGCCCGTAACTCCAGTTTTGGGGATCTGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR TCA 90 bp | GAAATATTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTGCCCAGCTCACGTTCTaGGGCAGCCAGAAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EILLPPPKEQFSSPGAESAQLTF*GSQKLS Trigger: CGAGAGCTTCTGGCTGCCTCAGAACGTGAGCTGGGC...AGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAATATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR TCA 90 bp | AGTGACCAGACAATGACTAGTAATCCAGAATTGTGCCCCAACCGAGTCAATGAACATGCAGACAGAAGATaGGTGCTCCCACTCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SDQTMTSNPELCPNRVNEHADRR*VLPLAP Trigger: TGGTGCGAGTGGGAGCACTCATCTTCTGTCTGCATG...TTCATTGACTCGGTTGGGGCACAATTCTGGATTACTAGTCATTGTCTGGTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR GCA 90 bp | ATTTGGCTTATATTTCTACAGCACTGTCCATCACAGAAGGAAGTCTGGGCAGGATCCTCACGGAGAAGATaGACACTGCCAGCGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: IWLIFLQHCPSQKEVWAGSSRRR*TLPAGT Trigger: TGTTCCCGCTGGCAGTGTGCATCTTCTCCGTGAGGA...TCCTGCCCAGACTTCCTTCTGTGATGGACAGTGCTGTAGAAATATAAGCCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| CDS-3UTR GCA 90 bp | CCAAAACTGGAGTTACGGGCAGTTTTGAGCTGCTCTTTATCGGTGCTAGAGACCAATGCCAACACGGAGTaGACAGGGCTTGGCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKLELRAVLSCSLSVLETNANTE*TGLGNK Trigger: TTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATT...GGTCTCTAGCACCGATAAAGAGCAGCTCAAAACTGCCCGTAACTCCAGTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | CCAAAACTGGAGTTACGGGCAGTTTTGAGCTGCTCTTTATCGGTGCTAGAGACCGAATTTCGTGAGCGTTaGAGGCTTGTCCTGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PKLELRAVLSCSLSVLETEFRER*RLVLIP Trigger: AGGAATCAGGACAAGCCTCCAACGCTCACGAAATTC...GGTCTCTAGCACCGATAAAGAGCAGCTCAAAACTGCCCGTAACTCCAGTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTCAAGAGCCATGGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCACATAATTGGCCATCTTaGCAGCTTCCAGTAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLKSHGTRSQMVWRQLNSHNWPS*QLPVRG Trigger: ACCCCTTACTGGAAGCTGCCAAGATGGCCAATTATG...TGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCATGGCTCTTGAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | GAATCTGGTAATCTCAGCTCCAGTCAACAACAGTCACATACGTTAGCTGGGCGAAGATCACAAAAAGGGTaGTACAGAGCCGCTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESGNLSSSQQQSHTLAGRRSQKG*YRAAHV Trigger: GACGTGAGCGGCTCTGTACCACCCTTTTTGTGATCT...TCGCCCAGCTAACGTATGTGACTGTTGTTGACTGGAGCTGAGATTACCAGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176970.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGTAATCTCAGCTCCAGTCAACAACAGTCACATACGTTAGCTGGGCGAACACCCGGCTCAAGGCTTTaGAAGCAGTCTGGACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SGNLSSSQQQSHTLAGRTPGSRL*KQSGQL Trigger: TAATTGTCCAGACTGCTTCCAAAGCCTTGAGCCGGG...TGTTCGCCCAGCTAACGTATGTGACTGTTGTTGACTGGAGCTGAGATTACCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176970.8 |
||
| CDS-3UTR TCA 90 bp | GGGATAGTTACTAAAGAGACAGACAGTAGAGGGTTGAAACAATTTAATCACAGAGCCCAGCTCACGTTCTaGGGCAGCCAGAAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GIVTKETDSRGLKQFNHRAQLTF*GSQKLS Trigger: CGAGAGCTTCTGGCTGCCTCAGAACGTGAGCTGGGC...TCTGTGATTAAATTGTTTCAACCCTCTACTGTCTGTCTCTTTAGTAACTATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGAGCCATGGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATCTCATCTTCTTCCTCTaGGCTGCTCTCTACATCACT | + |
|
Preference number: 4 (lower is better) Translates to: SRAMGRGHRWSGDSLIQDLIFFL*AALYIT Trigger: AGTGATGTAGAGAGCAGCTCAGAGGAAGAAGATGAG...ATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCCATGGCTCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023762.13 |
||
| CDS-3UTR GCA 90 bp | CCAATAACCTTACTGAAAGGACCAGAGGGCATTAAATACAAAACGGCAGAGTTTGGAGAAGATGCACACTaGCAGCGGGAACACCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PITLLKGPEGIKYKTAEFGEDAH*QREHRQ Trigger: CTGTCGGTGTTCCCGCTGGCAGTGTGCATCTTCTCC...AAACTCTGCCGTTTTGTATTTAATGCCCTCTGGTCCTTTCAGTAAGGTTATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR GCA 90 bp | ACAGAGCCAATAACCTTACTGAAAGGACCAGAGGGCATTAAATACAAAACGGCACTTCAGCCAAGTGGCTaGCTCCCATGTAGCCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEPITLLKGPEGIKYKTALQPSG*LPCSRS Trigger: TGAACGGCTACATGGGAGGCAGCCACTTGGCTGAAG...TGCCGTTTTGTATTTAATGCCCTCTGGTCCTTTCAGTAAGGTTATTGGCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023762.13 |
||
| CDS-3UTR GCA 90 bp | AAGGAATCTGGTAATCTCAGCTCCAGTCAACAACAGTCACATACGTTAGCTGGGATGGAACTGTCCAGCTaGCACCAGGCAGAGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KESGNLSSSQQQSHTLAGMELSS*HQAEKR Trigger: TCTTTTCTCTGCCTGGTGGCAGCTGGACAGTTCCAT...CCCAGCTAACGTATGTGACTGTTGTTGACTGGAGCTGAGATTACCAGATTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176970.8 |
||
| CDS-3UTR CCA 90 bp | CTCTACATCACTGCGGTCATCCTTAGACACATGCAAAGGATGGAACTGTCCAGCTGGCGAAACCAGCATTaGATTTTTCGAACACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYITAVILRHMQRMELSSWRNQH*IFRTLQ Trigger: CTGGAGTGTTCGAAAAATCCAATGCTGGTTTCGCCA...GCTGGACAGTTCCATCCTTTGCATGTGTCTAAGGATGACCGCAGTGATGTAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTGGTGACAGCACCGACCAGAGAAATCTaGTTCCGTAGCAGAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: FLLQKNNFQVLELSLVTAPTREI*FRSRRY Trigger: GTATCTTCTGCTACGGAATCAGATTTCTCTGGTCGG...TGCTGTCACCAGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176248.8 |
||
| CDS-3UTR GCA 90 bp | CCAATAACCTTACTGAAAGGACCAGAGGGCATTAAATACAAAACGGCAGAGTTTTCCTCACGGAGAAGATaGACACTGCCAGCGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PITLLKGPEGIKYKTAEFSSRRR*TLPAGT Trigger: TGTTCCCGCTGGCAGTGTGCATCTTCTCCGTGAGGA...AAACTCTGCCGTTTTGTATTTAATGCCCTCTGGTCCTTTCAGTAAGGTTATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR GCA 90 bp | GCTATGTTGATCCTGGGTAGTGTTCCATCAGGTGAAATATTACTTCCTCCTCCAATGGAACTGTCCAGCTaGCACCAGGCAGAGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AMLILGSVPSGEILLPPPMELSS*HQAEKR Trigger: TCTTTTCTCTGCCTGGTGGCAGCTGGACAGTTCCAT...TGGAGGAGGAAGTAATATTTCACCTGATGGAACACTACCCAGGATCAACATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| CDS-3UTR TCA 90 bp | ACAAACACAGAGCCAATAACCTTACTGAAAGGACCAGAGGGCATTAAATACAAAGTTGGAGGCTTGTCCTaGTTCCTCCGATGGCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TNTEPITLLKGPEGIKYKVGGLS*FLRWRN Trigger: GTTTCGCCATCGGAGGAATCAGGACAAGCCTCCAAC...TTTGTATTTAATGCCCTCTGGTCCTTTCAGTAAGGTTATTGGCTCTGTGTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR TCA 90 bp | TTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTGGTGACTTTCACAGAATTTCGTaGGCGTTGGAGGCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPPPKEQFSSPGAESGDFHRIS*ALEACP Trigger: AGGACAAGCCTCCAACGCTCACGAAATTCTGTGAAA...GTCACCAGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR TCA 90 bp | ACAAACACAGAGCCAATAACCTTACTGAAAGGACCAGAGGGCATTAAATACAAATCAGGAGAAGGGCATTaGAGAGCCACCAGGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TNTEPITLLKGPEGIKYKSGEGH*RATRKG Trigger: ACCCTTCCTGGTGGCTCTTCAATGCCCTTCTCCTGA...TTTGTATTTAATGCCCTCTGGTCCTTTCAGTAAGGTTATTGGCTCTGTGTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR GCA 90 bp | TTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTGGTGACAATGCCAACACGGAGTaGACAGGGCTTGGCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLPPPKEQFSSPGAESGDNANTE*TGLGNK Trigger: TTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATT...GTCACCAGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCTGGGCGAACACGTTCTAAGGCAGATGGGACCAGGAAGTACAGCTGGAAGAGAAACTATAAAAGCTaGGCCAAAGATCACAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAGRTRSKADGTRKYSWKRNYKS*AKDHKK Trigger: CTTTTTGTGATCTTTGGCGCAGCTTTTATAGTTTCT...CTTCCAGCTGTACTTCCTGGTCCCATCTGCCTTAGAACGTGTTCGCCCAGCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176970.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCAAGTCCTGGAGCTGAGTCTGGTGACAGCACTTATTTAAGTGATCAGGAACTTCTTCCTCTGAGCTaGTCTCTACATCACTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSSPGAESGDSTYLSDQELLPLS*SLHHCG Trigger: ACCGCAGTGATGTAGAGAGCAGCTCAGAGGAAGAAG...TTCCTGATCACTTAAATAAGTGCTGTCACCAGACTCAGCTCCAGGACTTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023762.13 |
||
| CDS-3UTR CCA 90 bp | ACAGAGCCAATAACCTTACTGAAAGGACCAGAGGGCATTAAATACAAAACGGCAAGATCACAAAAAGGGTaGTACAGAGCCGCTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: TEPITLLKGPEGIKYKTARSQKG*YRAAHV Trigger: GACGTGAGCGGCTCTGTACCACCCTTTTTGTGATCT...TGCCGTTTTGTATTTAATGCCCTCTGGTCCTTTCAGTAAGGTTATTGGCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR CCA 90 bp | CCAGAATTGTGCCCCAACCGAGTCAATGAAACTCATTTATATGCACAATACACATTAGGTAGGACCAGATaGCATGGAGCACCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PELCPNRVNETHLYAQYTLGRTR*HGAPAG Trigger: TCCTGCAGGTGCTCCATGCCATCTGGTCCTACCTAA...TGTGTATTGTGCATATAAATGAGTTTCATTGACTCGGTTGGGGCACAATTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR TCA 90 bp | TTTTCAAGTCCTGGAGCTGAGTCTGGTGACAGCACTTATTTAAGTGATCAGGAATTTCACAGAATTTCGTaGGCGTTGGAGGCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSSPGAESGDSTYLSDQEFHRIS*ALEACP Trigger: AGGACAAGCCTCCAACGCTCACGAAATTCTGTGAAA...TTCCTGATCACTTAAATAAGTGCTGTCACCAGACTCAGCTCCAGGACTTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR TCA 90 bp | TTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTGGTGACTCGACCAGAGAAATCTaGTTCCGTAGCAGAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: LLPPPKEQFSSPGAESGDSTREI*FRSRRY Trigger: GTATCTTCTGCTACGGAATCAGATTTCTCTGGTCGA...GTCACCAGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR TCA 90 bp | CTTCATTTGGGGAAGGAATCTGGTAATCTCAGCTCCAGTCAACAACAGTCACATTCGACCAGAGAAATCTaGTTCCGTAGCAGAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: LHLGKESGNLSSSQQQSHSTREI*FRSRRY Trigger: GTATCTTCTGCTACGGAATCAGATTTCTCTGGTCGA...ATGTGACTGTTGTTGACTGGAGCTGAGATTACCAGATTCCTTCCCCAAATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176970.8 |
||
| CDS-3UTR CCA 90 bp | TTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTGGTGACTGGCGAAACCAGCATTaGATTTTTCGAACACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPPPKEQFSSPGAESGDWRNQH*IFRTLQ Trigger: CTGGAGTGTTCGAAAAATCCAATGCTGGTTTCGCCA...GTCACCAGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | GAAATATTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTCACGTCTGGCATAATTaGCCATCTTGGCAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EILLPPPKEQFSSPGAESHVWHN*PSWQLP Trigger: TGGAAGCTGCCAAGATGGCCAATTATGCCAGACGTG...AGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAATATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CCA 90 bp | GAAATATTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTCCCGGCTCAAGGCTTTaGAAGCAGTCTGGACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: EILLPPPKEQFSSPGAESPGSRL*KQSGQL Trigger: TAATTGTCCAGACTGCTTCCAAAGCCTTGAGCCGGG...AGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAATATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| 3UTR CAA 72 bp | CCCATCAACCATCAGTTAAGAAAATGCTCTATAGGCTaGCCCACTGGCCAATCTAGTTGGGAAATTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PINHQLRKCSIG*PTGQSSWEIFS Trigger: TGAGAAAATTTCCCAACTAGATTGGCCAGTGGGCAAGCCTATAGAGCATTTTCTTAACTGATGGTTGATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| CDS-3UTR CCA 90 bp | GAAATATTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTCATAATTGGCCATCTTaGCAGCTTCCAGTAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EILLPPPKEQFSSPGAESHNWPS*QLPVRG Trigger: ACCCCTTACTGGAAGCTGCCAAGATGGCCAATTATG...AGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAATATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR TCA 90 bp | GAAATATTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTTCGACCAGAGAAATCTaGTTCCGTAGCAGAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: EILLPPPKEQFSSPGAESSTREI*FRSRRY Trigger: GTATCTTCTGCTACGGAATCAGATTTCTCTGGTCGA...AGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAATATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR GCA 90 bp | AGTGACCAGACAATGACTAGTAATCCAGAATTGTGCCCCAACCGAGTCAATGAAAGAAACTATAAAAGCTaGGCCAAAGATCACAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SDQTMTSNPELCPNRVNERNYKS*AKDHKK Trigger: CTTTTTGTGATCTTTGGCGCAGCTTTTATAGTTTCT...TTCATTGACTCGGTTGGGGCACAATTCTGGATTACTAGTCATTGTCTGGTCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR GCA 90 bp | ACAAACACAGAGCCAATAACCTTACTGAAAGGACCAGAGGGCATTAAATACAAATCATCCTTAGACACATaGAAAGGATGGAACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNTEPITLLKGPEGIKYKSSLDT*KGWNCP Trigger: TGGACAGTTCCATCCTTTGCATGTGTCTAAGGATGA...TTTGTATTTAATGCCCTCTGGTCCTTTCAGTAAGGTTATTGGCTCTGTGTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109035.11 |
||
| CDS-3UTR GCA 90 bp | TTTTCAAGTCCTGGAGCTGAGTCTGGTGACAGCACTTATTTAAGTGATCAGGAAAGAAACTATAAAAGCTaGGCCAAAGATCACAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSSPGAESGDSTYLSDQERNYKS*AKDHKK Trigger: CTTTTTGTGATCTTTGGCGCAGCTTTTATAGTTTCT...TTCCTGATCACTTAAATAAGTGCTGTCACCAGACTCAGCTCCAGGACTTGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CAA 90 bp | GGGACGAGGTCACAGATGGTCTGGAGACAGCTTAATTCAAGATGCAGCCAGGGCATGCAGTTGGCACCATaGCTAGAGCTGCTGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTRSQMVWRQLNSRCSQGMQLAP*LELLPE Trigger: CTCTGGCAGCAGCTCTAGCAATGGTGCCAACTGCAT...GCCCTGGCTGCATCTTGAATTAAGCTGTCTCCAGACCATCTGTGACCTCGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023762.13 |
||
| CDS GCA 90 bp | GGGTTCCACCTTATTGACAGGACTGTCTTTAATGCCAACACGGAGTaGACAGGGCTTGGCAATAAATCTGCAGCCCGAGCCACGCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GFHLIDRTVFNANTE*TGLGNKSAARATPS Trigger: ACTGGGCGTGGCTCGGGCTGCAGATTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCCTGTCAATAAGGTGGAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175876.8 |
||
| CDS CCA 90 bp | CTGCGCCAAAGATCACAAAAAGGGTGGTACAGAGCCGCTCACGTCTaGCATAATTGGCCATCTTGGCAGCTTCCAGTAAGGGGTCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LRQRSQKGWYRAAHV*HNWPSWQLPVRGLR Trigger: TCGCAGACCCCTTACTGGAAGCTGCCAAGATGGCCAATTATGCCAGACGTGAGCGGCTCTGTACCACCCTTTTTGTGATCTTTGGCGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000175876.8 ENSMUST00000176248.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCTTCAGCCAAGTGGCTGCCTCCCATGTAGCCGTTCATGCAGTTGGCACCTCCAGTCCAGTTGCTTaGATAGGCCCTTCAACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLFSQVAASHVAVHAVGTSSPVA*IGPSTF Trigger: AAAGGTTGAAGGGCCTATCAAAGCAACTGGACTGGA...GGTGCCAACTGCATGAACGGCTACATGGGAGGCAGCCACTTGGCTGAAGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS CCA 90 bp | AAAGGGTGGTACAGAGCCGCTCACGTCTGGCATAATTGGCCATCTTaGCAGCTTCCAGTAAGGGGTCTGCGAAGTCATGCAGACAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGWYRAAHVWHNWPS*QLPVRGLRSHADRR Trigger: TCTTCTGTCTGCATGACTTCGCAGACCCCTTACTGGAAGCTGCCAAGATGGCCAATTATGCCAGACGTGAGCGGCTCTGTACCACCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000175876.8 ENSMUST00000176248.8 |
||
| CDS CCA 90 bp | AGATCACAAAAAGGGTGGTACAGAGCCGCTCACGTCTGGCATAATTaGCCATCTTGGCAGCTTCCAGTAAGGGGTCTGCGAAGTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSQKGWYRAAHVWHN*PSWQLPVRGLRSHA Trigger: TGCATGACTTCGCAGACCCCTTACTGGAAGCTGCCAAGATGGCCAATTATGCCAGACGTGAGCGGCTCTGTACCACCCTTTTTGTGATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000175876.8 ENSMUST00000176248.8 |
||
| CDS TCA 90 bp | GCTGCCAGAGAGGTTGTTTTTGTGGGTTGTCTCATCTTCTTCCTCTaGGCTGCTCTCTACATCACTGCGGTCATCCTTAGACACCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AAREVVFVGCLIFFL*AALYITAVILRHLS Trigger: GGAAAGGTGTCTAAGGATGACCGCAGTGATGTAGAGAGCAGCTCAGAGGAAGAAGATGAGACAACCCACAAAAACAACCTCTCTGGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023762.13 |
||
| CDS GCA 90 bp | GGGTTCCACCTTATTGACAGGACTGTCTTTAATGCCAACACGGAGTaGACAGGGCTTGGCAATAAATCGCTCAAACAGCATCCTCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: GFHLIDRTVFNANTE*TGLGNKSLKQHPHG Trigger: TCCGTGAGGATGCTGTTTGAGCGATTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCCTGTCAATAAGGTGGAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS TCA 90 bp | CTCCACATGCTTTCACAGAATTTCGTGAGCGTTGGAGGCTTGTCCTaGTTCCTCCGATGGCGAAACCAGCATTGGATTTTTCGAACACTC | + |
|
Preference number: 5 (lower is better) Translates to: LHMLSQNFVSVGGLS*FLRWRNQHWIFRTL Trigger: GAGTGTTCGAAAAATCCAATGCTGGTTTCGCCATCGGAGGAATCAGGACAAGCCTCCAACGCTCACGAAATTCTGTGAAAGCATGTGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000175876.8 ENSMUST00000176248.8 |
||
| CDS GCA 90 bp | GGGTTCCACCTTATTGACAGGACTGTCTTTAATGCCAACACGGAGTaGACAGGGCTTGGCAATAAATTCTTGGGTTCCTGGAGATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GFHLIDRTVFNANTE*TGLGNKFLGSWRLG Trigger: TCCCAATCTCCAGGAACCCAAGAATTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCCTGTCAATAAGGTGGAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176627.3 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCCAATAACCTTACTGAAAGGACCAGAGGGCATTAAATACAAAACGGCACGGAGTGCACAGGGCTaGGCAATAAATCGCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TEPITLLKGPEGIKYKTARSAQG*AINRSN Trigger: GTTTGAGCGATTTATTGCCAAGCCCTGTGCACTCCG...TGCCGTTTTGTATTTAATGCCCTCTGGTCCTTTCAGTAAGGTTATTGGCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR CAA 90 bp | GACAGCACTTATTTAAGTGATCAGGAACCCAGAGTCTCAAGAGCCATGGGACGAATGGCGAAACCAGCATaGGATTTTTCGAACACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DSTYLSDQEPRVSRAMGRMAKPA*DFSNTP Trigger: TGGAGTGTTCGAAAAATCCAATGCTGGTTTCGCCAT...TCGTCCCATGGCTCTTGAGACTCTGGGTTCCTGATCACTTAAATAAGTGCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CAA 90 bp | CCAATAACCTTACTGAAAGGACCAGAGGGCATTAAATACAAAACGGCAGAGTTTCGGAGTGCACAGGGCTaGGCAATAAATCGCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PITLLKGPEGIKYKTAEFRSAQG*AINRSN Trigger: GTTTGAGCGATTTATTGCCAAGCCCTGTGCACTCCG...AAACTCTGCCGTTTTGTATTTAATGCCCTCTGGTCCTTTCAGTAAGGTTATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 |
||
| CDS-3UTR CAA 90 bp | TTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTGGTGACTCCAGTCCAGTTGCTTaGATAGGCCCTTCAACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLPPPKEQFSSPGAESGDSSPVA*IGPSTF Trigger: AAAGGTTGAAGGGCCTATCAAAGCAACTGGACTGGA...GTCACCAGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CAA 90 bp | ATTGCTAGAGCTGCTGCCAGAGAGGTTGTTTTTGTGGGTTGTCTCATCTTCTTCATGGCGAAACCAGCATaGGATTTTTCGAACACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IARAAAREVVFVGCLIFFMAKPA*DFSNTP Trigger: TGGAGTGTTCGAAAAATCCAATGCTGGTTTCGCCAT...GAAGAAGATGAGACAACCCACAAAAACAACCTCTCTGGCAGCAGCTCTAGCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CAA 90 bp | GAAATATTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTCGGAGTGCACAGGGCTaGGCAATAAATCGCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: EILLPPPKEQFSSPGAESRSAQG*AINRSN Trigger: GTTTGAGCGATTTATTGCCAAGCCCTGTGCACTCCG...AGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAATATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS-3UTR CAA 90 bp | CAGACAATGACTAGTAATCCAGAATTGTGCCCCAACCGAGTCAATGAAACTCATGGTTGTTTTTGTGGGTaGTCTCATCTTCTTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QTMTSNPELCPNRVNETHGCFCG*SHLLPL Trigger: CAGAGGAAGAAGATGAGACAACCCACAAAAACAACC...ATGAGTTTCATTGACTCGGTTGGGGCACAATTCTGGATTACTAGTCATTGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023762.13 |
||
| CDS-3UTR CAA 90 bp | GAAATATTACTTCCTCCTCCAAAAGAACAATTTTCAAGTCCTGGAGCTGAGTCTATGGCGAAACCAGCATaGGATTTTTCGAACACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EILLPPPKEQFSSPGAESMAKPA*DFSNTP Trigger: TGGAGTGTTCGAAAAATCCAATGCTGGTTTCGCCAT...AGACTCAGCTCCAGGACTTGAAAATTGTTCTTTTGGAGGAGGAAGTAATATTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS GCA 72 bp | TCGCTCAAACAGCATCCTCACGGAGAAGATGCACACTaGCAGCGGGAACACCGACAGCACGTGCTGGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SLKQHPHGEDAH*QREHRQHVLGA Trigger: CGCGCCCAGCACGTGCTGTCGGTGTTCCCGCTGGCAGTGTGCATCTTCTCCGTGAGGATGCTGTTTGAGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS CCA 72 bp | AAAGGGTGGTACAGAGCCGCTCACGTCTGGCATAATTaGCCATCTTGGCAGCTTCCAGTAAGGGGTCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: KGWYRAAHVWHN*PSWQLPVRGLR Trigger: TCGCAGACCCCTTACTGGAAGCTGCCAAGATGGCCAATTATGCCAGACGTGAGCGGCTCTGTACCACCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000175876.8 ENSMUST00000176248.8 |
||
| CDS CAA 72 bp | GGACTGTCTTTAATGCCAACACGGAGTGCACAGGGCTaGGCAATAAATCTGCAGCCCGAGCCACGCCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GLSLMPTRSAQG*AINLQPEPRPV Trigger: AACTGGGCGTGGCTCGGGCTGCAGATTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175876.8 |
||
| CDS CCA 72 bp | TACAGAGCCGCTCACGTCTGGCATAATTGGCCATCTTaGCAGCTTCCAGTAAGGGGTCTGCGAAGTCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: YRAAHVWHNWPS*QLPVRGLRSHA Trigger: TGCATGACTTCGCAGACCCCTTACTGGAAGCTGCCAAGATGGCCAATTATGCCAGACGTGAGCGGCTCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000175876.8 ENSMUST00000176248.8 |
||
| CDS CAA 90 bp | TTATTGACAGGACTGTCTTTAATGCCAACACGGAGTGCACAGGGCTaGGCAATAAATCTGCAGCCCGAGCCACGCCCAGTTTCTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLTGLSLMPTRSAQG*AINLQPEPRPVSFS Trigger: GCTGAAAGAAACTGGGCGTGGCTCGGGCTGCAGATTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCCTGTCAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175876.8 |
||
| CDS GCA 72 bp | CTTATTGACAGGACTGTCTTTAATGCCAACACGGAGTaGACAGGGCTTGGCAATAAATCTGCAGCCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LIDRTVFNANTE*TGLGNKSAARA Trigger: GGCTCGGGCTGCAGATTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCCTGTCAATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175876.8 |
||
| CDS CCA 72 bp | AGATCACAAAAAGGGTGGTACAGAGCCGCTCACGTCTaGCATAATTGGCCATCTTGGCAGCTTCCAGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSQKGWYRAAHV*HNWPSWQLPVR Trigger: CCTTACTGGAAGCTGCCAAGATGGCCAATTATGCCAGACGTGAGCGGCTCTGTACCACCCTTTTTGTGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000175876.8 ENSMUST00000176248.8 |
||
| CDS CAA 72 bp | GGACTGTCTTTAATGCCAACACGGAGTGCACAGGGCTaGGCAATAAATCGCTCAAACAGCATCCTCACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLSLMPTRSAQG*AINRSNSILTE Trigger: CTCCGTGAGGATGCTGTTTGAGCGATTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS CCA 72 bp | GAATCTCCACATGCTTTCACAGAATTTCGTGAGCGTTaGAGGCTTGTCCTGATTCCTCCGATGGCGAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: ESPHAFTEFRER*RLVLIPPMAKP Trigger: TGGTTTCGCCATCGGAGGAATCAGGACAAGCCTCCAACGCTCACGAAATTCTGTGAAAGCATGTGGAGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000175876.8 ENSMUST00000176248.8 |
||
| CDS CAA 72 bp | GGACTGTCTTTAATGCCAACACGGAGTGCACAGGGCTaGGCAATAAATTCTTGGGTTCCTGGAGATTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLSLMPTRSAQG*AINSWVPGDWE Trigger: CTCCCAATCTCCAGGAACCCAAGAATTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176627.3 |
||
| CDS CAA 90 bp | ACAGATACGAACACCTTCTCAAGGGTGTCATTGGGTTCCACCTTATaGACAGGACTGTCTTTAATGCCAACACGGAGTGCACAGGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TDTNTFSRVSLGSTL*TGLSLMPTRSAQGL Trigger: CAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCCTGTCAATAAGGTGGAACCCAATGACACCCTTGAGAAGGTGTTCGTATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000175876.8 ENSMUST00000176248.8 ENSMUST00000176627.3 |
||
| CDS CAA 90 bp | TTATTGACAGGACTGTCTTTAATGCCAACACGGAGTGCACAGGGCTaGGCAATAAATTCTTGGGTTCCTGGAGATTGGGAGGCAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLTGLSLMPTRSAQG*AINSWVPGDWEAAF Trigger: GAAGGCTGCCTCCCAATCTCCAGGAACCCAAGAATTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCCTGTCAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176627.3 |
||
| CDS CAA 90 bp | TTATTGACAGGACTGTCTTTAATGCCAACACGGAGTGCACAGGGCTaGGCAATAAATCGCTCAAACAGCATCCTCACGGAGAAGATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLTGLSLMPTRSAQG*AINRSNSILTEKMH Trigger: GTGCATCTTCTCCGTGAGGATGCTGTTTGAGCGATTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCCTGTCAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||
| CDS TCA 72 bp | CTTTCACAGAATTTCGTGAGCGTTGGAGGCTTGTCCTaGTTCCTCCGATGGCGAAACCAGCATTGGATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSQNFVSVGGLS*FLRWRNQHWIF Trigger: AAAAATCCAATGCTGGTTTCGCCATCGGAGGAATCAGGACAAGCCTCCAACGCTCACGAAATTCTGTGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000175876.8 ENSMUST00000176248.8 ENSMUST00000176627.3 |
||
| CDS GCA 72 bp | CTTATTGACAGGACTGTCTTTAATGCCAACACGGAGTaGACAGGGCTTGGCAATAAATTCTTGGGTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LIDRTVFNANTE*TGLGNKFLGSW Trigger: CCAGGAACCCAAGAATTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCCTGTCAATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176627.3 |
||
| CDS CAA 72 bp | AACACCTTCTCAAGGGTGTCATTGGGTTCCACCTTATaGACAGGACTGTCTTTAATGCCAACACGGAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: NTFSRVSLGSTL*TGLSLMPTRSA Trigger: TGCACTCCGTGTTGGCATTAAAGACAGTCCTGTCAATAAGGTGGAACCCAATGACACCCTTGAGAAGGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000175876.8 ENSMUST00000176248.8 ENSMUST00000176627.3 |
||
| CDS GCA 72 bp | CTTATTGACAGGACTGTCTTTAATGCCAACACGGAGTaGACAGGGCTTGGCAATAAATCGCTCAAACAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LIDRTVFNANTE*TGLGNKSLKQH Trigger: ATGCTGTTTGAGCGATTTATTGCCAAGCCCTGTGCACTCCGTGTTGGCATTAAAGACAGTCCTGTCAATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023762.13 ENSMUST00000109035.11 ENSMUST00000176248.8 |
||