Pregenerated sensors for CERS4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008206Ensembl transcript IDs: ENSMUST00000008350.16, ENSMUST00000176042.2, ENSMUST00000176130.10
Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TCATCATGCGCAACAAGGGCTCAGTCCCTGCCTTCTACTGTGTGCTaGGATATCTGGGGGCTCCGGCCCTGGGAAGCTTCACCATGGCTT | + |
Preference number: 1 (lower is better) Translates to: SSCATRAQSLPSTVC*DIWGLRPWEASPWL Trigger: AAGCCATGGTGAAGCTTCCCAGGGCCGGAGCCCCCAGATATCCCAGCACACAGTAGAAGGCAGGGACTGAGCCCTTGTTGCGCATGATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | AACCAGGTGTGGTGGTGGTGGCCTGTGCCTGTAATTTCAGCATTATaGGGCAGGGGGAACAAATACAAATCCCTGACACTCCCTGGCCAG | + |
Preference number: 1 (lower is better) Translates to: NQVWWWWPVPVISAL*GRGNKYKSLTLPGQ Trigger: CTGGCCAGGGAGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGCACAGGCCACCACCACCACACCTGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR TCA 90 bp | TGGCCATCCCAACACAGCCACTTGCATCCTACAGCAGACCACATTTaGATGGTGCTCACGGTGGCTGTTTCCACTGTCTTGGCCAAAACT | + |
Preference number: 1 (lower is better) Translates to: WPSQHSHLHPTADHI*MVLTVAVSTVLAKT Trigger: AGTTTTGGCCAAGACAGTGGAAACAGCCACCGTGAGCACCATTCAAATGTGGTCTGCTGTAGGATGCAAGTGGCTGTGTTGGGATGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 90 bp | AGGTTGGTGCTCCTTCCCAGGCTGGCCTCAAACCTACAATCTTCCTaGCTCAGCATGCAGAGTACTGTGATTTCAGACTTGTGGTCACAC | + |
Preference number: 1 (lower is better) Translates to: RLVLLPRLASNLQSS*LSMQSTVISDLWSH Trigger: GTGTGACCACAAGTCTGAAATCACAGTACTCTGCATGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 90 bp | TGGACTTGCTTGGAAAACCAGGCTGGCCTTGAACTCAGATTTGTCTaGCTTTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACCACCAT | + |
Preference number: 1 (lower is better) Translates to: WTCLENQAGLELRFV*LCLPSAGIKGVHHH Trigger: ATGGTGGTGCACACCTTTAATCCCAGCACTTGGGAGGCAAAGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | CTTCAGCTGTGGACCTTCAGAAACTGGCTCGTCATCACTGGAGTCTaGTTCTTCCACATCGCTACGAATGTCCTCTGTCATCTGACCCTT | + |
Preference number: 1 (lower is better) Translates to: LQLWTFRNWLVITGV*FFHIATNVLCHLTL Trigger: AAGGGTCAGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAAGGTCCACAGCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
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3UTR GCA 90 bp | CCCAACACAGCCACTTGCATCCTACAGCAGACCACATTTGAATGGTaGTCACGGTGGCTGTTTCCACTGTCTTGGCCAAAACTATTACTG | + |
Preference number: 1 (lower is better) Translates to: PNTATCILQQTTFEW*SRWLFPLSWPKLLL Trigger: CAGTAATAGTTTTGGCCAAGACAGTGGAAACAGCCACCGTGAGCACCATTCAAATGTGGTCTGCTGTAGGATGCAAGTGGCTGTGTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | ACTATTCCATGGAGAACAGTGGAAGGCCACCACTTGACTATTCCATaGAGAACAGTGGAAGGCCACCACTTGACAGAGGTGACTAGGAAG | + |
Preference number: 1 (lower is better) Translates to: TIPWRTVEGHHLTIP*RTVEGHHLTEVTRK Trigger: CTTCCTAGTCACCTCTGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAATAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | TCCCATTCTTCAGCTGTGGACCTTCAGAAACTGGCTCGTCATCACTaGAGTCTGGTTCTTCCACATCGCTACGAATGTCCTCTGTCATCT | + |
Preference number: 1 (lower is better) Translates to: SHSSAVDLQKLARHH*SLVLPHRYECPLSS Trigger: AGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAAGGTCCACAGCTGAAGAATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
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3UTR TCA 90 bp | GTCCTGGAGAGCTACTATGAAGTAGAACAAAGTGAAGGCACTGACTaGGGAGCAGGGAGTATCTTCATGCTGTGGTGCTATACAGGCAAG | + |
Preference number: 1 (lower is better) Translates to: VLESYYEVEQSEGTD*GAGSIFMLWCYTGK Trigger: CTTGCCTGTATAGCACCACAGCATGAAGATACTCCCTGCTCCTCAGTCAGTGCCTTCACTTTGTTCTACTTCATAGTAGCTCTCCAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | GAACTTCCATGGAGAACAGTGGAAGGCCACCACTTGACTATTCCATaGAGAACAGTGGAAGGCCACCACTTGACTATTCCATGGAGAACA | + |
Preference number: 1 (lower is better) Translates to: ELPWRTVEGHHLTIP*RTVEGHHLTIPWRT Trigger: TGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAAGTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | ATAACAGGGTCTTCCAACAAACAATCACATAAAAACCAGGTGTGGTaGTGGTGGCCTGTGCCTGTAATTTCAGCATTATGGGGCAGGGGG | + |
Preference number: 1 (lower is better) Translates to: ITGSSNKQSHKNQVW*WWPVPVISALWGRG Trigger: CCCCCTGCCCCATAATGCTGAAATTACAGGCACAGGCCACCACCACCACACCTGGTTTTTATGTGATTGTTTGTTGGAAGACCCTGTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR TCA 90 bp | CTGAGGCATATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCACTaGTGGCCGACTAGGCCATCTTCTGCTACATATGCAGATAGTGAC | + |
Preference number: 1 (lower is better) Translates to: LRHIKFARPMGLSFH*WPTRPSSATYADSD Trigger: GTCACTATCTGCATATGTAGCAGAAGATGGCCTAGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGCCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR TCA 90 bp | CTGTCATCTGACCCTTATGCAGGAAACTGTAGAGCATGCGCAGGATaGGGCAGAACCAGTACACATGAAGAATCTGTAGCATCACCAAGA | + |
Preference number: 1 (lower is better) Translates to: LSSDPYAGNCRACAG*GRTSTHEESVASPR Trigger: TCTTGGTGATGCTACAGATTCTTCATGTGTACTGGTTCTGCCTCATCCTGCGCATGCTCTACAGTTTCCTGCATAAGGGTCAGATGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
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3UTR GCA 90 bp | TGTCTTGGCCAAAACTATTACTGTGGTTCTAGCCTTCAAGGTCACTaGTCCAAGAAGAAGAATCAGGTGGTTGTTGGTAACACGGGCACC | + |
Preference number: 1 (lower is better) Translates to: CLGQNYYCGSSLQGH*SKKKNQVVVGNTGT Trigger: GGTGCCCGTGTTACCAACAACCACCTGATTCTTCTTCTTGGAGCAGTGACCTTGAAGGCTAGAACCACAGTAATAGTTTTGGCCAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | TTTGTTGTTGTAGTTGTTTTTCTAGGTTGGTGCTCCTTCCCAGGCTaGCCTCAAACCTACAATCTTCCTGCCTCAGCATGCAGAGTACTG | + |
Preference number: 1 (lower is better) Translates to: FVVVVVFLGWCSFPG*PQTYNLPASACRVL Trigger: CAGTACTCTGCATGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACCTAGAAAAACAACTACAACAACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 90 bp | TCCCCACTCTCTGATTCTCATTCTTCCATGACACTCAGTTCCTCTTaGATACTCCCAAAGATGGCAAGGTCTAACCATACATGGATCCTC | + |
Preference number: 1 (lower is better) Translates to: SPLSDSHSSMTLSSS*ILPKMARSNHTWIL Trigger: GAGGATCCATGTATGGTTAGACCTTGCCATCTTTGGGAGTATGCAAGAGGAACTGAGTGTCATGGAAGAATGAGAATCAGAGAGTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 90 bp | TGTTTCAAGACAGGGTTTCTCTATGTAACAGACCTGTCCTGGACTTaGTTGGAAAACCAGGCTGGCCTTGAACTCAGATTTGTCTGCCTT | + |
Preference number: 1 (lower is better) Translates to: CFKTGFLYVTDLSWT*LENQAGLELRFVCL Trigger: AAGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAGGTCTGTTACATAGAGAAACCCTGTCTTGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 90 bp | CGCATAAACACGAATGACTCGCTCATTCACTCATTACTCTTCCTGTaGTCCTCCCATACTGTCCCTTTCTGGTTGGTTCTTTACTCTTCC | + |
Preference number: 1 (lower is better) Translates to: RINTNDSLIHSLLFL*SSHTVPFWLVLYSS Trigger: GGAAGAGTAAAGAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAATGAGCGAGTCATTCGTGTTTATGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 90 bp | AGATCCCATGGGGATAGGTCTGTCCTGCATAGCCTTGTGCTTCTCTaGATTGTCAGCTCTAGTTCTTGGCATCTTTCTGAAGCAGAAAAA | + |
Preference number: 1 (lower is better) Translates to: RSHGDRSVLHSLVLL*IVSSSSWHLSEAEK Trigger: TTTTTCTGCTTCAGAAAGATGCCAAGAACTAGAGCTGACAATGCAGAGAAGCACAAGGCTATGCAGGACAGACCTATCCCCATGGGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 90 bp | GATTATGAAGATCCCATGGGGATAGGTCTGTCCTGCATAGCCTTGTaGTTCTCTGCATTGTCAGCTCTAGTTCTTGGCATCTTTCTGAAG | + |
Preference number: 1 (lower is better) Translates to: DYEDPMGIGLSCIAL*FSALSALVLGIFLK Trigger: CTTCAGAAAGATGCCAAGAACTAGAGCTGACAATGCAGAGAAGCACAAGGCTATGCAGGACAGACCTATCCCCATGGGATCTTCATAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 90 bp | TTCACCAGATGTGGATCAGTGTATGCAGTGCTTAGACCATCAATATaGCAACACAACTCGGGACCACTGCCTCCAAAAGTCTATGACCTT | + |
Preference number: 1 (lower is better) Translates to: FTRCGSVYAVLRPSI*QHNSGPLPPKVYDL Trigger: AAGGTCATAGACTTTTGGAGGCAGTGGTCCCGAGTTGTGTTGGCATATTGATGGTCTAAGCACTGCATACACTGATCCACATCTGGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 90 bp | TTGGTCTCCAGTGCAGGACTTCTAGGCTGTATCTTTGCCCCCAAGTaGTACATCATTTTGTTAAGACCACAAAGGAACTCTATTCAGGGT | + |
Preference number: 1 (lower is better) Translates to: LVSSAGLLGCIFAPK*YIILLRPQRNSIQG Trigger: ACCCTGAATAGAGTTCCTTTGTGGTCTTAACAAAATGATGTAGCACTTGGGGGCAAAGATACAGCCTAGAAGTCCTGCACTGGAGACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 90 bp | AGATTGACACAGATACACATTCTGAACATGAACATATTGTCATCATaGGCAACAAGGGCTCAGTCCCTGCCTTCTACTGTGTGCTGGGAT | + |
Preference number: 1 (lower is better) Translates to: RLTQIHILNMNILSS*ATRAQSLPSTVCWD Trigger: ATCCCAGCACACAGTAGAAGGCAGGGACTGAGCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTCAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | TTAATAACAGGGTCTTCCAACAAACAATCACATAAAAACCAGGTGTaGTGGTGGTGGCCTGTGCCTGTAATTTCAGCATTATGGGGCAGG | + |
Preference number: 1 (lower is better) Translates to: LITGSSNKQSHKNQV*WWWPVPVISALWGR Trigger: CCTGCCCCATAATGCTGAAATTACAGGCACAGGCCACCACCACCACACCTGGTTTTTATGTGATTGTTTGTTGGAAGACCCTGTTATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR TCA 90 bp | CTTTATTTTTGGATGTTGCCTGAGATGACCTCTTTCCCCACTCTCTaGTTCTCATTCTTCCATGACACTCAGTTCCTCTTGCATACTCCC | + |
Preference number: 1 (lower is better) Translates to: LYFWMLPEMTSFPTL*FSFFHDTQFLLHTP Trigger: GGGAGTATGCAAGAGGAACTGAGTGTCATGGAAGAATGAGAATCAGAGAGTGGGGAAAGAGGTCATCTCAGGCAACATCCAAAAATAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | TTGTTTCCATCTCTCAAGTTCTCTAGAAGCTGTTTCTCTCATCAGTaGCCCTCTGTCTTCTGTCTTGAATACCCTTTCCTGTTCTTTCCC | + |
Preference number: 1 (lower is better) Translates to: LFPSLKFSRSCFSHQ*PSVFCLEYPFLFFP Trigger: GGGAAAGAACAGGAAAGGGTATTCAAGACAGAAGACAGAGGGCCACTGATGAGAGAAACAGCTTCTAGAGAACTTGAGAGATGGAAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR TCA 90 bp | TCACATGGCCACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTaGACAAAGGAGAGCTGGAAGGAGCCCGTTATATCCAACAAAGTA | + |
Preference number: 1 (lower is better) Translates to: SHGHTGKNRFNEQAS*TKESWKEPVISNKV Trigger: TACTTTGTTGGATATAACGGGCTCCTTCCAGCTCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTGGCCATGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | TATTTTTGTTTCAAGACAGGGTTTCTCTATGTAACAGACCTGTCCTaGACTTGCTTGGAAAACCAGGCTGGCCTTGAACTCAGATTTGTC | + |
Preference number: 1 (lower is better) Translates to: YFCFKTGFLYVTDLS*TCLENQAGLELRFV Trigger: GACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAGGTCTGTTACATAGAGAAACCCTGTCTTGAAACAAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | ACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTaGTTCTTTACTCTTCCATTTCTGTGTCACATGGATTACATTCTT | + |
Preference number: 1 (lower is better) Translates to: THYSSCAPPILSLSG*FFTLPFLCHMDYIL Trigger: AAGAATGTAATCCATGTGACACAGAAATGGAAGAGTAAAGAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | AAGAACAAGGAAGAAATAATGAACACTAATGTGAAGTGTAGACTTTaGGTGAGAATGTGTCACTGTGGACTGTACCACACACAGCACTGT | + |
Preference number: 1 (lower is better) Translates to: KNKEEIMNTNVKCRL*VRMCHCGLYHTQHC Trigger: ACAGTGCTGTGTGTGGTACAGTCCACAGTGACACATTCTCACCCAAAGTCTACACTTCACATTAGTGTTCATTATTTCTTCCTTGTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 90 bp | CTGAAGGAACAAAGGAAGGCTATCAGGCTAACCTACTCAAATAAGTaGGTGAAGAAGAGGGGCTGTGAACAAAAGAATAATGAACATGAA | + |
Preference number: 1 (lower is better) Translates to: LKEQRKAIRLTYSNK*VKKRGCEQKNNEHE Trigger: TTCATGTTCATTATTCTTTTGTTCACAGCCCCTCTTCTTCACCCACTTATTTGAGTAGGTTAGCCTGATAGCCTTCCTTTGTTCCTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 90 bp | GGCTACTTTCTACTTTCATGTGATTGGGGAGAGAGAAAGAATGGATaGCAGCTACATATGATATTTATACTTATGACCATGGCTTTAGTC | + |
Preference number: 1 (lower is better) Translates to: GYFLLSCDWGERKNG*QLHMIFILMTMALV Trigger: GACTAAAGCCATGGTCATAAGTATAAATATCATATGTAGCTGGCATCCATTCTTTCTCTCTCCCCAATCACATGAAAGTAGAAAGTAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR TCA 90 bp | CGTATAATTGAACTAGGAGGAGAAATCATAACTTTGTCCATGTCATaGTGCAGTAGTTGCATTATTCCCTGCATAATGTCCTTTTATTTG | + |
Preference number: 1 (lower is better) Translates to: RIIELGGEIITLSMS*CSSCIIPCIMSFYL Trigger: CAAATAAAAGGACATTATGCAGGGAATAATGCAACTACTGCATCATGACATGGACAAAGTTATGATTTCTCCTCCTAGTTCAATTATACG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | GGTTGGTGCTCCTTCCCAGGCTGGCCTCAAACCTACAATCTTCCTGCCTCAGCATTCTGCTCTACCCTCTaGCTTGGACAGCAGCAGAGA | + |
Preference number: 2 (lower is better) Translates to: GWCSFPGWPQTYNLPASAFCSTL*LGQQQR Trigger: TCTCTGCTGCTGTCCAAGCCAGAGGGTAGAGCAGAA...TGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCCCCCTTTCTTGGCCCTaGCGTTCCCCTGTACTGAGG | + |
Preference number: 2 (lower is better) Translates to: SHLHLDPDYPVWNLAGKLPLSWP*RSPVLR Trigger: CCTCAGTACAGGGGAACGCCAGGGCCAAGAAAGGGG...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 90 bp | TGTCCTGGACTTGCTTGGAAAACCAGGCTGGCCTTGAACTCAGATTaGTCTGCCTTTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACC | + |
Preference number: 2 (lower is better) Translates to: CPGLAWKTRLALNSD*SAFASQVLGLKVCT Trigger: GGTGCACACCTTTAATCCCAGCACTTGGGAGGCAAAGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 90 bp | TTGGCCATCCCAACACAGCCACTTGCATCCTACAGCAGACCACATTaGAATGGTGCTCACGGTGGCTGTTTCCACTGTCTTGGCCAAAAC | + |
Preference number: 2 (lower is better) Translates to: LAIPTQPLASYSRPH*NGAHGGCFHCLGQN Trigger: GTTTTGGCCAAGACAGTGGAAACAGCCACCGTGAGCACCATTCAAATGTGGTCTGCTGTAGGATGCAAGTGGCTGTGTTGGGATGGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTCCTTCTACTGTGTGCTaGGATATCTGGGGGCTCCGG | + |
Preference number: 2 (lower is better) Translates to: ACNFSIMGQGEQIQIPDTPSTVC*DIWGLR Trigger: CCGGAGCCCCCAGATATCCCAGCACACAGTAGAAGG...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR TCA 90 bp | TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCCACCAGCCCAGCATCTaGATATTCACAATGCTGGCG | + |
Preference number: 2 (lower is better) Translates to: FTHYSSCAPPILSLSGWFHQPSI*IFTMLA Trigger: CGCCAGCATTGTGAATATTCAGATGCTGGGCTGGTG...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 90 bp | CTAGCCTTCAAGGTCACTGCTCCAAGAAGAAGAATCAGGTGGTTGTaGGTAACACGGGCACCTAACTTCATAGTTCCCATCTGCACCTTG | + |
Preference number: 2 (lower is better) Translates to: LAFKVTAPRRRIRWL*VTRAPNFIVPICTL Trigger: CAAGGTGCAGATGGGAACTATGAAGTTAGGTGCCCGTGTTACCAACAACCACCTGATTCTTCTTCTTGGAGCAGTGACCTTGAAGGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 90 bp | GTTCTAGCCTTCAAGGTCACTGCTCCAAGAAGAAGAATCAGGTGGTaGTTGGTAACACGGGCACCTAACTTCATAGTTCCCATCTGCACC | + |
Preference number: 2 (lower is better) Translates to: VLAFKVTAPRRRIRW*LVTRAPNFIVPICT Trigger: GGTGCAGATGGGAACTATGAAGTTAGGTGCCCGTGTTACCAACAACCACCTGATTCTTCTTCTTGGAGCAGTGACCTTGAAGGCTAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR TCA 90 bp | TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCAAACCAGGCTGGCCTTaGACTCAGATTTGTCTGCCT | + |
Preference number: 2 (lower is better) Translates to: FTHYSSCAPPILSLSGWFKPGWP*TQICLP Trigger: AGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTT...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR GCA 90 bp | GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTCTGGGATTAAAGGTGTaGACCACCATACCTGGCCCA | + |
Preference number: 2 (lower is better) Translates to: ACNFSIMGQGEQIQIPDTLGLKV*TTIPGP Trigger: TGGGCCAGGTATGGTGGTGCACACCTTTAATCCCAG...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCCACTTGACTATTCCATaGAGAACAGTGGAAGGCCAC | + |
Preference number: 2 (lower is better) Translates to: SHLHLDPDYPVWNLAGKLHLTIP*RTVEGH Trigger: GTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTG...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 90 bp | CTCTTCTGCAGTACCTGTTCCTTGACACACATGCACACACCCCCATaGTTTGTTTTGAAACTGGGCCCTGCTTTGTATCCCAGGCTTATA | + |
Preference number: 2 (lower is better) Translates to: LFCSTCSLTHMHTPP*FVLKLGPALYPRLI Trigger: TATAAGCCTGGGATACAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGGGTGTGTGCATGTGTGTCAAGGAACAGGTACTGCAGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR TCA 90 bp | TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATATCTTGATGTGGCAGTaGGGAATCCTGTCAACAGAG | + |
Preference number: 2 (lower is better) Translates to: CLGPSSIDHTGLKLTEIHILMWQ*GILSTE Trigger: CTCTGTTGACAGGATTCCTCACTGCCACATCAAGAT...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR TCA 90 bp | GGACATTTCAACATAACCACACTGAAGGAGTCCCTGACCACCAAGCCAGCACTGATTCTCATTCTTCCATaGCACTCAGTTCCTCTTGCA | + |
Preference number: 2 (lower is better) Translates to: GHFNITTLKESLTTKPALILILP*HSVPLA Trigger: TGCAAGAGGAACTGAGTGTCATGGAAGAATGAGAAT...CAGTGCTGGCTTGGTGGTCAGGGACTCCTTCAGTGTGGTTATGTTGAAATGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR GCA 90 bp | TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATCAGGGAGTATCTTCATaGTGTGGTGCTATACAGGCA | + |
Preference number: 2 (lower is better) Translates to: CLGPSSIDHTGLKLTEIHQGVSS*CGAIQA Trigger: TGCCTGTATAGCACCACAGCATGAAGATACTCCCTG...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR GCA 90 bp | TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATAGTCATGAGTCACCATaGCAGGCTCTGCTCTTTGTA | + |
Preference number: 2 (lower is better) Translates to: CLGPSSIDHTGLKLTEIHSHESP*QALLFV Trigger: TACAAAGAGCAGAGCCTGGCATGGTGACTCATGACT...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CCA 90 bp | GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTGCAAAGGAACTTCCATaGAGAACAGTGGAAGGCCAC | + |
Preference number: 2 (lower is better) Translates to: ACNFSIMGQGEQIQIPDTAKELP*RTVEGH Trigger: GTGGCCTTCCACTGTTCTCCATGGAAGTTCCTTTGC...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 90 bp | CTGGGCCCTGCTTTGTATCCCAGGCTTATATGTTCTTCCTGTCTATaGGCTTCTTCCTCCCTAGTGTTAAATGACAGTCATGAGTCACCA | + |
Preference number: 2 (lower is better) Translates to: LGPALYPRLICSSCL*ASSSLVLNDSHESP Trigger: TGGTGACTCATGACTGTCATTTAACACTAGGGAGGAAGAAGCCAATAGACAGGAAGAACATATAAGCCTGGGATACAAAGCAGGGCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 90 bp | CACATGCACACACCCCCATTGTTTGTTTTGAAACTGGGCCCTGCTTaGTATCCCAGGCTTATATGTTCTTCCTGTCTATTGGCTTCTTCC | + |
Preference number: 2 (lower is better) Translates to: HMHTPPLFVLKLGPA*YPRLICSSCLLASS Trigger: GGAAGAAGCCAATAGACAGGAAGAACATATAAGCCTGGGATACAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGGGTGTGTGCATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 90 bp | AGTACCTGTTCCTTGACACACATGCACACACCCCCATTGTTTGTTTaGAAACTGGGCCCTGCTTTGTATCCCAGGCTTATATGTTCTTCC | + |
Preference number: 2 (lower is better) Translates to: STCSLTHMHTPPLFV*KLGPALYPRLICSS Trigger: GGAAGAACATATAAGCCTGGGATACAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGGGTGTGTGCATGTGTGTCAAGGAACAGGTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CAA 90 bp | CTCCTCCCTAGATTGACACAGATACACATTCTGAACATGAACATATaGTCATCATGCGCAACAAGGGCTCAGTCCCTGCCTTCTACTGTG | + |
Preference number: 2 (lower is better) Translates to: LLPRLTQIHILNMNI*SSCATRAQSLPSTV Trigger: CACAGTAGAAGGCAGGGACTGAGCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTCAATCTAGGGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR TCA 90 bp | GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTGCATGCAGAGTACTGTaGTTTCAGACTTGTGGTCAC | + |
Preference number: 2 (lower is better) Translates to: ACNFSIMGQGEQIQIPDTACRVL*FQTCGH Trigger: GTGACCACAAGTCTGAAATCACAGTACTCTGCATGC...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR GCA 90 bp | GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCACACCCACAGGTTTCTaGTCTACCCTCTGGCTTGGA | + |
Preference number: 2 (lower is better) Translates to: DTDTHSEHEHIVIMRNKGTPTGF*STLWLG Trigger: TCCAAGCCAGAGGGTAGAGCAGAAACCTGTGGGTGT...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR GCA 90 bp | TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATACACTCAGTTCCTCTTaGATACTCCCAAAGATGGCA | + |
Preference number: 2 (lower is better) Translates to: CLGPSSIDHTGLKLTEIHTLSSS*ILPKMA Trigger: TGCCATCTTTGGGAGTATGCAAGAGGAACTGAGTGT...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR GCA 90 bp | ATGGCCACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTGAACAAAGGAGAGACCTGTCCTGGACTTaGTTGGAAAACCAGGCTGGC | + |
Preference number: 2 (lower is better) Translates to: MATQERIDLMNRLAEQRRDLSWT*LENQAG Trigger: GCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAGGTC...TCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTGGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CCA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTCCCCAAGCTACAGCCTaGGGTTGGCTCAGGCCAGAT | + |
Preference number: 2 (lower is better) Translates to: SQTSLISNPQRPHIIKQIPQATA*GWLRPD Trigger: ATCTGGCCTGAGCCAACCCCAGGCTGTAGCTTGGGG...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATCTGTTGACGTTTTATTaGTCCTTGGAGCCAAAGCTC | + |
Preference number: 2 (lower is better) Translates to: CLGPSSIDHTGLKLTEIHLLTFY*SLEPKL Trigger: GAGCTTTGGCTCCAAGGACCAATAAAACGTCAACAG...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCACTCAGCCTCCATCTTaGAGGAGGATGTTTTCCTAT | + |
Preference number: 2 (lower is better) Translates to: FTHYSSCAPPILSLSGWFTQPPS*RRMFSY Trigger: ATAGGAAAACATCCTCCTCCAAGATGGAGGCTGAGT...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | GGACATTTCAACATAACCACACTGAAGGAGTCCCTGACCACCAAGCCAGCACTGCTGTCCCTTTCTGGTTaGTTCTTTACTCTTCCATTT | + |
Preference number: 2 (lower is better) Translates to: GHFNITTLKESLTTKPALLSLSG*FFTLPF Trigger: AAATGGAAGAGTAAAGAACCAACCAGAAAGGGACAG...CAGTGCTGGCTTGGTGGTCAGGGACTCCTTCAGTGTGGTTATGTTGAAATGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR TCA 90 bp | CCTTTCCTATCGGTTGCTTTGTCTTCTTGTCTCTTTCACAAGTCTCTATGCATTGGAGAGGAACTGCTGTaGAGGGAACTTAAGCTCTGG | + |
Preference number: 2 (lower is better) Translates to: PFLSVALSSCLFHKSLCIGEELL*RELKLW Trigger: CCAGAGCTTAAGTTCCCTTCACAGCAGTTCCTCTCC...AATGCATAGAGACTTGTGAAAGAGACAAGAAGACAAAGCAACCGATAGGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCAGGTTTCAGACTTTATaGAGACTGGCAAAGAGATCA | + |
Preference number: 2 (lower is better) Translates to: SHLHLDPDYPVWNLAGKLRFQTL*RLAKRS Trigger: TGATCTCTTTGCCAGTCTCCATAAAGTCTGAAACCT...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCTTTACTGATGTCTTCTaGGTCTATATGCCCAAGTGT | + |
Preference number: 2 (lower is better) Translates to: SHLHLDPDYPVWNLAGKLFTDVF*VYMPKC Trigger: ACACTTGGGCATATAGACCCAGAAGACATCAGTAAA...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR TCA 90 bp | GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCCCCCATTGTTTGTTTTaGAACTGGGCCCTGCTTTGT | + |
Preference number: 2 (lower is better) Translates to: DTDTHSEHEHIVIMRNKGPHCLF*NWALLC Trigger: ACAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGG...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR TCA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTGGAGAGGCTTACACGTaGTGGGCAAAGGGAGCAATG | + |
Preference number: 2 (lower is better) Translates to: SQTSLISNPQRPHIIKQIGEAYT*WAKGAM Trigger: CATTGCTCCCTTTGCCCATCACGTGTAAGCCTCTCC...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR TCA 90 bp | GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCAATGAACAGGCTAGCTaGACAAAGGAGAGCTGGAAG | + |
Preference number: 2 (lower is better) Translates to: DTDTHSEHEHIVIMRNKGNEQAS*TKESWK Trigger: CTTCCAGCTCTCCTTTGTTCAGCTAGCCTGTTCATT...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR GCA 90 bp | GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCGAACTCAGATTTGTCTaGCTTTGCCTCCCAAGTGCT | + |
Preference number: 2 (lower is better) Translates to: DTDTHSEHEHIVIMRNKGELRFV*LCLPSA Trigger: AGCACTTGGGAGGCAAAGGCAGACAAATCTGAGTTC...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | CCTTTCCTATCGGTTGCTTTGTCTTCTTGTCTCTTTCACAAGTCTCTATGCATTATAAAGACCCCAGGGTaGGCTGCAGGTTGCTTTAAG | + |
Preference number: 2 (lower is better) Translates to: PFLSVALSSCLFHKSLCIIKTPG*AAGCFK Trigger: CTTAAAGCAACCTGCAGCCCACCCTGGGGTCTTTAT...AATGCATAGAGACTTGTGAAAGAGACAAGAAGACAAAGCAACCGATAGGAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCCATTTCTGTGTCACATaGATTACATTCTTCAACTCG | + |
Preference number: 2 (lower is better) Translates to: SHLHLDPDYPVWNLAGKLHFCVT*ITFFNS Trigger: CGAGTTGAAGAATGTAATCCATGTGACACAGAAATG...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | GGACATTTCAACATAACCACACTGAAGGAGTCCCTGACCACCAAGCCAGCACTGTGCAAACTGATTGACTaGATTAAAAACTGCAAAGGA | + |
Preference number: 2 (lower is better) Translates to: GHFNITTLKESLTTKPALCKLID*IKNCKG Trigger: TCCTTTGCAGTTTTTAATCCAGTCAATCAGTTTGCA...CAGTGCTGGCTTGGTGGTCAGGGACTCCTTCAGTGTGGTTATGTTGAAATGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR GCA 90 bp | TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCGAGAGAAAGAATGGATaGCAGCTACATATGATATTT | + |
Preference number: 2 (lower is better) Translates to: SHLHLDPDYPVWNLAGKLERKNG*QLHMIF Trigger: AAATATCATATGTAGCTGGCATCCATTCTTTCTCTC...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTGAATGGTGCTCACGGTaGCTGTTTCCACTGTCTTGG | + |
Preference number: 2 (lower is better) Translates to: SQTSLISNPQRPHIIKQIEWCSR*LFPLSW Trigger: CCAAGACAGTGGAAACAGCCACCGTGAGCACCATTC...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR TCA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTTGGAAGGCCACCACTTaGCTATTCCATGGAGAACAG | + |
Preference number: 2 (lower is better) Translates to: SQTSLISNPQRPHIIKQIWKATT*LFHGEQ Trigger: CTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCA...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR GCA 90 bp | AGCATGCAGAGTACTGTGATTTCAGACTTGTGGTCACACCTTGTTTCCATCTCTTCCTTTCCTATCGGTTaGTTTGTCTTCTTGTCTCTT | + |
Preference number: 2 (lower is better) Translates to: SMQSTVISDLWSHLVSISSFPIG*FVFLSL Trigger: AAGAGACAAGAAGACAAAGCAACCGATAGGAAAGGA...AGAGATGGAAACAAGGTGTGACCACAAGTCTGAAATCACAGTACTCTGCATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR GCA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTGGGATAGGTCTGTCCTaGATAGCCTTGTGCTTCTCT | + |
Preference number: 2 (lower is better) Translates to: SQTSLISNPQRPHIIKQIGIGLS*IALCFS Trigger: AGAGAAGCACAAGGCTATGCAGGACAGACCTATCCC...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 90 bp | CTCTATGCATTCTCTACCAATGCACCCTCTGTTTCTCCTAAACTGTaGTTCTCTCAACAGAAGCCACAGTTCTCTTCCTTTTTCTCATAT | + |
Preference number: 2 (lower is better) Translates to: LYAFSTNAPSVSPKL*FSQQKPQFSSFFSY Trigger: ATATGAGAAAAAGGAAGAGAACTGTGGCTTCTGTTGAGAGAACAACAGTTTAGGAGAAACAGAGGGTGCATTGGTAGAGAATGCATAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR TCA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTACTCAAATAAGTGGGTaGAGAAGAGGGGCTGTGAAC | + |
Preference number: 2 (lower is better) Translates to: SQTSLISNPQRPHIIKQITQISG*RRGAVN Trigger: GTTCACAGCCCCTCTTCTTCACCCACTTATTTGAGT...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR GCA 90 bp | TGCAAACTGATTGACTGGATTAAAAACTGCAAAGGAACTTCCATGGAGAACAGTACATTTCCAATGCTATaGCAAAAGTCCCCCATCTCC | + |
Preference number: 2 (lower is better) Translates to: CKLIDWIKNCKGTSMENSTFPML*QKSPIS Trigger: GGAGATGGGGGACTTTTGGCATAGCATTGGAAATGT...ACTGTTCTCCATGGAAGTTCCTTTGCAGTTTTTAATCCAGTCAATCAGTTTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | ATGGCCACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTGAACAAAGGAGAAGTATCTTCATGCTGTaGTGCTATACAGGCAAGAGT | + |
Preference number: 2 (lower is better) Translates to: MATQERIDLMNRLAEQRRSIFML*CYTGKS Trigger: ACTCTTGCCTGTATAGCACCACAGCATGAAGATACT...TCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTGGCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | ATGGCCACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTGAACAAAGGAGACATACTGTCCCTTTCTaGTTGGTTCTTTACTCTTCC | + |
Preference number: 2 (lower is better) Translates to: MATQERIDLMNRLAEQRRHTVPF*LVLYSS Trigger: GGAAGAGTAAAGAACCAACCAGAAAGGGACAGTATG...TCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTGGCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR TCA 90 bp | TGCAAACTGATTGACTGGATTAAAAACTGCAAAGGAACTTCCATGGAGAACAGTCTCTGTCTTCTGTCTTaGATACCCTTTCCTGTTCTT | + |
Preference number: 2 (lower is better) Translates to: CKLIDWIKNCKGTSMENSLCLLS*IPFPVL Trigger: AAGAACAGGAAAGGGTATTCAAGACAGAAGACAGAG...ACTGTTCTCCATGGAAGTTCCTTTGCAGTTTTTAATCCAGTCAATCAGTTTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR GCA 90 bp | TGCAAACTGATTGACTGGATTAAAAACTGCAAAGGAACTTCCATGGAGAACAGTTTTCACAAGTCTCTATaGATTCTCTACCAATGCACC | + |
Preference number: 2 (lower is better) Translates to: CKLIDWIKNCKGTSMENSFHKSL*ILYQCT Trigger: GGTGCATTGGTAGAGAATGCATAGAGACTTGTGAAA...ACTGTTCTCCATGGAAGTTCCTTTGCAGTTTTTAATCCAGTCAATCAGTTTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR GCA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTCTAGATCCAACTCTATaGTCTCTCCAAGAAACACAC | + |
Preference number: 2 (lower is better) Translates to: SQTSLISNPQRPHIIKQILDPTL*SLQETH Trigger: GTGTGTTTCTTGGAGAGAGCATAGAGTTGGATCTAG...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTCTGTTTCCACTGTCTTaGCCAAAACTATTACTGTGG | + |
Preference number: 2 (lower is better) Translates to: SQTSLISNPQRPHIIKQILFPLS*PKLLLW Trigger: CCACAGTAATAGTTTTGGCCAAGACAGTGGAAACAG...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CCA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTGTCAGCTCTAGTTCTTaGCATCTTTCTGAAGCAGAA | + |
Preference number: 2 (lower is better) Translates to: SQTSLISNPQRPHIIKQIVSSSS*HLSEAE Trigger: TTCTGCTTCAGAAAGATGCCAAGAACTAGAGCTGAC...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 90 bp | GCTGTGAAATACTCTGTATGGTATTTCAGTGAGGTCATTACATATTaGTCAATACTTACCAAATGTAAGGCACAAAATATGAACCCCAGT | + |
Preference number: 2 (lower is better) Translates to: AVKYSVWYFSEVITY*SILTKCKAQNMNPS Trigger: ACTGGGGTTCATATTTTGTGCCTTACATTTGGTAAGTATTGACAAATATGTAATGACCTCACTGAAATACCATACAGAGTATTTCACAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CCA 72 bp | GGGCTCCGGCCCTGGGAAGCTTCACCATGGCTTTCCTaGCCAGGAATCTACCCGACACTTTCTATGAAGCCA | + |
Preference number: 3 (lower is better) Translates to: GLRPWEASPWLS*PGIYPTLSMKP Trigger: TGGCTTCATAGAAAGTGTCGGGTAGATTCCTGGCCAGGAAAGCCATGGTGAAGCTTCCCAGGGCCGGAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CAA 90 bp | GGTTGGTGCTCCTTCCCAGGCTGGCCTCAAACCTACAATCTTCCTGCCTCAGCACACTCAGCCTCCATCTaGGAGGAGGATGTTTTCCTA | + |
Preference number: 3 (lower is better) Translates to: GWCSFPGWPQTYNLPASAHSASI*EEDVFL Trigger: TAGGAAAACATCCTCCTCCAAGATGGAGGCTGAGTG...TGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR TCA 72 bp | CCTGTCCTGGACTTGCTTGGAAAACCAGGCTGGCCTTaGACTCAGATTTGTCTGCCTTTGCCTCCCAAGTGC | + |
Preference number: 3 (lower is better) Translates to: PVLDLLGKPGWP*TQICLPLPPKC Trigger: GCACTTGGGAGGCAAAGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 72 bp | ACATATTGTCATCATGCGCAACAAGGGCTCAGTCCCTaGCTTCTACTGTGTGCTGGGATATCTGGGGGCTCC | + |
Preference number: 3 (lower is better) Translates to: TYCHHAQQGLSP*LLLCAGISGGS Trigger: GGAGCCCCCAGATATCCCAGCACACAGTAGAAGGCAGGGACTGAGCCCTTGTTGCGCATGATGACAATATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CAA 90 bp | GGACATTTCAACATAACCACACTGAAGGAGTCCCTGACCACCAAGCCAGCACTGCTGTCCTGGACTTGCTaGGAAAACCAGGCTGGCCTT | + |
Preference number: 3 (lower is better) Translates to: GHFNITTLKESLTTKPALLSWTC*ENQAGL Trigger: AAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAG...CAGTGCTGGCTTGGTGGTCAGGGACTCCTTCAGTGTGGTTATGTTGAAATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | CCCAGAATCACCAGCCCAGCATCTGAATATTCACAATaGTGGCGGCAACCCCTCAACATCAGTCCAAGGTTG | + |
Preference number: 3 (lower is better) Translates to: PRITSPASEYSQ*WRQPLNISPRL Trigger: CAACCTTGGACTGATGTTGAGGGGTTGCCGCCAGCATTGTGAATATTCAGATGCTGGGCTGGTGATTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | CAAGGGAATATAAAGACCCCAGGGTGGGCTGCAGGTTaGTTTAAGCAAGGGACTACAAGGACACCCACAGGT | + |
Preference number: 3 (lower is better) Translates to: QGNIKTPGWAAG*FKQGTTRTPTG Trigger: ACCTGTGGGTGTCCTTGTAGTCCCTTGCTTAAAGCAACCTGCAGCCCACCCTGGGGTCTTTATATTCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | TGGAGAACAGTGGAAGGCCACCACTTGACTATTCCATaGAGAACAGTGGAAGGCCACCACTTGACAGAGGTG | + |
Preference number: 3 (lower is better) Translates to: WRTVEGHHLTIP*RTVEGHHLTEV Trigger: CACCTCTGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | GGTTGGTGCTCCTTCCCAGGCTGGCCTCAAACCTACAATCTTCCTGCCTCAGCAGCCAGGCTCTGCTCTTaGTACCAAAAGTCTTTATTT | + |
Preference number: 3 (lower is better) Translates to: GWCSFPGWPQTYNLPASAARLCS*YQKSLF Trigger: AAATAAAGACTTTTGGTACAAAGAGCAGAGCCTGGC...TGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR TCA 72 bp | AGGAACTTCCATGGAGAACAGTGGAAGGCCACCACTTaGCTATTCCATGGAGAACAGTGGAAGGCCACCACT | + |
Preference number: 3 (lower is better) Translates to: RNFHGEQWKATT*LFHGEQWKATT Trigger: AGTGGTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAAGTTCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | AAGGACACCCACAGGTTTCTGCTCTACCCTCTGGCTTaGACAGCAGCAGAGAGGCTTCATCTAAGCTTAAGA | + |
Preference number: 3 (lower is better) Translates to: KDTHRFLLYPLA*TAAERLHLSLR Trigger: TCTTAAGCTTAGATGAAGCCTCTCTGCTGCTGTCCAAGCCAGAGGGTAGAGCAGAAACCTGTGGGTGTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | TCTCCACTGTCTCAAGGGAATATAAAGACCCCAGGGTaGGCTGCAGGTTGCTTTAAGCAAGGGACTACAAGG | + |
Preference number: 3 (lower is better) Translates to: SPLSQGNIKTPG*AAGCFKQGTTR Trigger: CCTTGTAGTCCCTTGCTTAAAGCAACCTGCAGCCCACCCTGGGGTCTTTATATTCCCTTGAGACAGTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | GTAGTTGTTTTTCTAGGTTGGTGCTCCTTCCCAGGCTaGCCTCAAACCTACAATCTTCCTGCCTCAGCATGC | + |
Preference number: 3 (lower is better) Translates to: VVVFLGWCSFPG*PQTYNLPASAC Trigger: GCATGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACCTAGAAAAACAACTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | TCAGCTGTGGACCTTCAGAAACTGGCTCGTCATCACTaGAGTCTGGTTCTTCCACATCGCTACGAATGTCCT | + |
Preference number: 3 (lower is better) Translates to: SAVDLQKLARHH*SLVLPHRYECP Trigger: AGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAAGGTCCACAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
||
3UTR-3UTR CAA 90 bp | TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATCAGATTTGTCTGCCTTaGCCTCCCAAGTGCTGGGAT | + |
Preference number: 3 (lower is better) Translates to: CLGPSSIDHTGLKLTEIHQICLP*PPKCWD Trigger: ATCCCAGCACTTGGGAGGCAAAGGCAGACAAATCTG...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTTCCCAACACAGCCACTaGCATCCTACAGCAGACCAC | + |
Preference number: 3 (lower is better) Translates to: ACNFSIMGQGEQIQIPDTSQHSH*HPTADH Trigger: GTGGTCTGCTGTAGGATGCAAGTGGCTGTGTTGGGA...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | TTGGAAAACCAGGCTGGCCTTGAACTCAGATTTGTCTaGCTTTGCCTCCCAAGTGCTGGGATTAAAGGTGTG | + |
Preference number: 3 (lower is better) Translates to: LENQAGLELRFV*LCLPSAGIKGV Trigger: CACACCTTTAATCCCAGCACTTGGGAGGCAAAGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | ACACTGGCCTCAAACTCACAGAGATCCATCTGTATCTaGCTCCCAAGTGCTGGGAGTAAAGACATGTCACCA | + |
Preference number: 3 (lower is better) Translates to: TLASNSQRSICI*LPSAGSKDMSP Trigger: TGGTGACATGTCTTTACTCCCAGCACTTGGGAGGCAGATACAGATGGATCTCTGTGAGTTTGAGGCCAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | TGGAGAACAGTGGAAGGCCACCACTTGACTATTCCATaGAGAACAGTGGAAGGCCACCACTTGACTATTCCA | + |
Preference number: 3 (lower is better) Translates to: WRTVEGHHLTIP*RTVEGHHLTIP Trigger: TGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | TGGACCTTCAGAAACTGGCTCGTCATCACTGGAGTCTaGTTCTTCCACATCGCTACGAATGTCCTCTGTCAT | + |
Preference number: 3 (lower is better) Translates to: WTFRNWLVITGV*FFHIATNVLCH Trigger: ATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAAGGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
||
3UTR-3UTR CAA 90 bp | TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCGACACTCAGTTCCTCTaGCATACTCCCAAAGATGGC | + |
Preference number: 3 (lower is better) Translates to: FTHYSSCAPPILSLSGWFDTQFL*HTPKDG Trigger: GCCATCTTTGGGAGTATGCAAGAGGAACTGAGTGTC...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR TCA 72 bp | GACCCTTATGCAGGAAACTGTAGAGCATGCGCAGGATaGGGCAGAACCAGTACACATGAAGAATCTGTAGCA | + |
Preference number: 3 (lower is better) Translates to: DPYAGNCRACAG*GRTSTHEESVA Trigger: TGCTACAGATTCTTCATGTGTACTGGTTCTGCCTCATCCTGCGCATGCTCTACAGTTTCCTGCATAAGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
||
3UTR GCA 72 bp | CTGGATTATGAAGATCCCATGGGGATAGGTCTGTCCTaGATAGCCTTGTGCTTCTCTGCATTGTCAGCTCTA | + |
Preference number: 3 (lower is better) Translates to: LDYEDPMGIGLS*IALCFSALSAL Trigger: TAGAGCTGACAATGCAGAGAAGCACAAGGCTATGCAGGACAGACCTATCCCCATGGGATCTTCATAATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | TGTGGATCAGTGTATGCAGTGCTTAGACCATCAATATaGCAACACAACTCGGGACCACTGCCTCCAAAAGTC | + |
Preference number: 3 (lower is better) Translates to: CGSVYAVLRPSI*QHNSGPLPPKV Trigger: GACTTTTGGAGGCAGTGGTCCCGAGTTGTGTTGGCATATTGATGGTCTAAGCACTGCATACACTGATCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | TTCAAGACAGGGTTTCTCTATGTAACAGACCTGTCCTaGACTTGCTTGGAAAACCAGGCTGGCCTTGAACTC | + |
Preference number: 3 (lower is better) Translates to: FKTGFLYVTDLS*TCLENQAGLEL Trigger: GAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAGGTCTGTTACATAGAGAAACCCTGTCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | TGCAAACTGATTGACTGGATTAAAAACTGCAAAGGAACTTCCATGGAGAACAGTGCTCTACCCTCTGGCTaGGACAGCAGCAGAGAGGCT | + |
Preference number: 3 (lower is better) Translates to: CKLIDWIKNCKGTSMENSALPSG*DSSREA Trigger: AGCCTCTCTGCTGCTGTCCAAGCCAGAGGGTAGAGC...ACTGTTCTCCATGGAAGTTCCTTTGCAGTTTTTAATCCAGTCAATCAGTTTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | ATGGCCACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTGAACAAAGGAGAGTGGAAGGCCACCACTaGACAGAGGTGACTAGGAAG | + |
Preference number: 3 (lower is better) Translates to: MATQERIDLMNRLAEQRRVEGHH*TEVTRK Trigger: CTTCCTAGTCACCTCTGTCAAGTGGTGGCCTTCCAC...TCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTGGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCCTGAACATGAACATATaGTCATCATGCGCAACAAGG | + |
Preference number: 3 (lower is better) Translates to: SHLHLDPDYPVWNLAGKLLNMNI*SSCATR Trigger: CCTTGTTGCGCATGATGACAATATGTTCATGTTCAG...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR TCA 72 bp | TGGATGTTGCCTGAGATGACCTCTTTCCCCACTCTCTaGTTCTCATTCTTCCATGACACTCAGTTCCTCTTG | + |
Preference number: 3 (lower is better) Translates to: WMLPEMTSFPTL*FSFFHDTQFLL Trigger: CAAGAGGAACTGAGTGTCATGGAAGAATGAGAATCAGAGAGTGGGGAAAGAGGTCATCTCAGGCAACATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR TCA 72 bp | CTCTTCACAGATGCATTAGCTAGGCTAGATGTCCCATaGGCTCCTGAGACAAATTCTGTCTCTGTCTCCCAT | + |
Preference number: 3 (lower is better) Translates to: LFTDALARLDVP*APETNSVSVSH Trigger: ATGGGAGACAGAGACAGAATTTGTCTCAGGAGCTCATGGGACATCTAGCCTAGCTAATGCATCTGTGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | GTGAAGGCACTGACTGAGGAGCAGGGAGTATCTTCATaGTGTGGTGCTATACAGGCAAGAGTTGACATAAAT | + |
Preference number: 3 (lower is better) Translates to: VKALTEEQGVSS*CGAIQARVDIN Trigger: ATTTATGTCAACTCTTGCCTGTATAGCACCACAGCATGAAGATACTCCCTGCTCCTCAGTCAGTGCCTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | ACGAATGACTCGCTCATTCACTCATTACTCTTCCTGTaGTCCTCCCATACTGTCCCTTTCTGGTTGGTTCTT | + |
Preference number: 3 (lower is better) Translates to: TNDSLIHSLLFL*SSHTVPFWLVL Trigger: AAGAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAATGAGCGAGTCATTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | CTTGGTCTCCAGTGCAGGACTTCTAGGCTGTATCTTTaGCCCCAAGTGCTACATCATTTTGTTAAGACCACA | + |
Preference number: 3 (lower is better) Translates to: LGLQCRTSRLYL*PQVLHHFVKTT Trigger: TGTGGTCTTAACAAAATGATGTAGCACTTGGGGGCAAAGATACAGCCTAGAAGTCCTGCACTGGAGACCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | CTATCTCATCTCACTACCTTGTTCTGTACGCAGAGTTaGCCCTCATTCTTGCCCCAGCATTTTTCCTTCCTT | + |
Preference number: 3 (lower is better) Translates to: LSHLTTLFCTQS*PSFLPQHFSFL Trigger: AAGGAAGGAAAAATGCTGGGGCAAGAATGAGGGCCAACTCTGCGTACAGAACAAGGTAGTGAGATGAGATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | ACATATGCAGATAGTGACACGAGCTCCAGGGGGTACTaGTTAGCTCATATTGTTGTTCCATCTATGGGGTTG | + |
Preference number: 3 (lower is better) Translates to: TYADSDTSSRGY*LAHIVVPSMGL Trigger: CAACCCCATAGATGGAACAACAATATGAGCTAACCAGTACCCCCTGGAGCTCGTGTCACTATCTGCATATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | CATTTGTGCTGCTACATTCAGCCTTTATCTGGGTCCTaGGAATCCAAACTCACATCATCAGGCTTGTGTAGC | + |
Preference number: 3 (lower is better) Translates to: HLCCYIQPLSGS*ESKLTSSGLCS Trigger: GCTACACAAGCCTGATGATGTGAGTTTGGATTCCCAGGACCCAGATAAAGGCTGAATGTAGCAGCACAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | TCCAACAAACAATCACATAAAAACCAGGTGTGGTGGTaGTGGCCTGTGCCTGTAATTTCAGCATTATGGGGC | + |
Preference number: 3 (lower is better) Translates to: SNKQSHKNQVWW*WPVPVISALWG Trigger: GCCCCATAATGCTGAAATTACAGGCACAGGCCACCACCACCACACCTGGTTTTTATGTGATTGTTTGTTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTCTCACATCATCAGGCTaGTGTAGCAAGTGCATTTAC | + |
Preference number: 3 (lower is better) Translates to: ACNFSIMGQGEQIQIPDTLTSSG*CSKCIY Trigger: GTAAATGCACTTGCTACACAAGCCTGATGATGTGAG...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR TCA 72 bp | AGCTACTATGAAGTAGAACAAAGTGAAGGCACTGACTaGGGAGCAGGGAGTATCTTCATGCTGTGGTGCTAT | + |
Preference number: 3 (lower is better) Translates to: SYYEVEQSEGTD*GAGSIFMLWCY Trigger: ATAGCACCACAGCATGAAGATACTCCCTGCTCCTCAGTCAGTGCCTTCACTTTGTTCTACTTCATAGTAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | CAGATACACATTCTGAACATGAACATATTGTCATCATaGGCAACAAGGGCTCAGTCCCTGCCTTCTACTGTG | + |
Preference number: 3 (lower is better) Translates to: QIHILNMNILSS*ATRAQSLPSTV Trigger: CACAGTAGAAGGCAGGGACTGAGCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | TCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTaGTTCTTTACTCTTCCATTTCTGTGTCACATGGAT | + |
Preference number: 3 (lower is better) Translates to: SSCAPPILSLSG*FFTLPFLCHMD Trigger: ATCCATGTGACACAGAAATGGAAGAGTAAAGAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCTGTTCTTCCTGTCTATaGGCTTCTTCCTCCCTAGTG | + |
Preference number: 3 (lower is better) Translates to: DTDTHSEHEHIVIMRNKGCSSCL*ASSSLV Trigger: CACTAGGGAGGAAGAAGCCAATAGACAGGAAGAACA...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCAAACTGGGCCCTGCTTaGTATCCCAGGCTTATATGT | + |
Preference number: 3 (lower is better) Translates to: DTDTHSEHEHIVIMRNKGKLGPA*YPRLIC Trigger: ACATATAAGCCTGGGATACAAAGCAGGGCCCAGTTT...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | ATGGCCACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTGAACAAAGGAGACCCCCATTGTTTGTTTaGAAACTGGGCCCTGCTTTG | + |
Preference number: 3 (lower is better) Translates to: MATQERIDLMNRLAEQRRPPLFV*KLGPAL Trigger: CAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGGG...TCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTGGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTACTGTCCCTTTCTGGTaGGTTCTTTACTCTTCCATT | + |
Preference number: 3 (lower is better) Translates to: ACNFSIMGQGEQIQIPDTTVPFW*VLYSSI Trigger: AATGGAAGAGTAAAGAACCAACCAGAAAGGGACAGT...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCGCATTTGGAAGACTATaGGGAGGGCAAGTTGAAAGG | + |
Preference number: 3 (lower is better) Translates to: DTDTHSEHEHIVIMRNKGAFGRL*GGQVER Trigger: CCTTTCAACTTGCCCTCCCAATAGTCTTCCAAATGC...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR TCA 72 bp | CACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTaGACAAAGGAGAGCTGGAAGGAGCCCGTTATATCC | + |
Preference number: 3 (lower is better) Translates to: HTGKNRFNEQAS*TKESWKEPVIS Trigger: GGATATAACGGGCTCCTTCCAGCTCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | GAAAATACTACTGCTCAAACCTCACTACATTTATTTTaGAAGCGAGCGAGCGAGCGAGAAAGAGAGAGAGAG | + |
Preference number: 3 (lower is better) Translates to: ENTTAQTSLHLF*KRASERERERE Trigger: CTCTCTCTCTCTTTCTCGCTCGCTCGCTCGCTTGCAAAATAAATGTAGTGAGGTTTGAGCAGTAGTATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | TTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTaGTTGGTTCTTTACTCTTCCATTTCTGTGTCACAT | + |
Preference number: 3 (lower is better) Translates to: LLFLCSSHTVPF*LVLYSSISVSH Trigger: ATGTGACACAGAAATGGAAGAGTAAAGAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR CCA 72 bp | TCTTCCAACAAACAATCACATAAAAACCAGGTGTGGTaGTGGTGGCCTGTGCCTGTAATTTCAGCATTATGG | + |
Preference number: 3 (lower is better) Translates to: SSNKQSHKNQVW*WWPVPVISALW Trigger: CCATAATGCTGAAATTACAGGCACAGGCCACCACCACCACACCTGGTTTTTATGTGATTGTTTGTTGGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | CCTTTCCTATCGGTTGCTTTGTCTTCTTGTCTCTTTCACAAGTCTCTATGCATTTCTCATCTCACTACCTaGTTCTGTACGCAGAGTTGG | + |
Preference number: 3 (lower is better) Translates to: PFLSVALSSCLFHKSLCISHLTT*FCTQSW Trigger: CCAACTCTGCGTACAGAACAAGGTAGTGAGATGAGA...AATGCATAGAGACTTGTGAAAGAGACAAGAAGACAAAGCAACCGATAGGAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR TCA 72 bp | GGTTTCAGACTTTATGGAGACTGGCAAAGAGATCAGTaGATTTGTAGCACTTACTTTCCCTACGGTCTAAGC | + |
Preference number: 3 (lower is better) Translates to: GFRLYGDWQRDQ*ICSTYFPYGLS Trigger: GCTTAGACCGTAGGGAAAGTAAGTGCTACAAATTCACTGATCTCTTTGCCAGTCTCCATAAAGTCTGAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | TCTGATTCTCATTCTTCCATGACACTCAGTTCCTCTTaGATACTCCCAAAGATGGCAAGGTCTAACCATACA | + |
Preference number: 3 (lower is better) Translates to: SDSHSSMTLSSS*ILPKMARSNHT Trigger: TGTATGGTTAGACCTTGCCATCTTTGGGAGTATGCAAGAGGAACTGAGTGTCATGGAAGAATGAGAATCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | TCCTCCCTAGTGTTAAATGACAGTCATGAGTCACCATaGCAGGCTCTGCTCTTTGTACCAAAAGTCTTTATT | + |
Preference number: 3 (lower is better) Translates to: SSLVLNDSHESP*QALLFVPKVFI Trigger: AATAAAGACTTTTGGTACAAAGAGCAGAGCCTGGCATGGTGACTCATGACTGTCATTTAACACTAGGGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR GCA 72 bp | CAAAACTATTACTGTGGTTCTAGCCTTCAAGGTCACTaGTCCAAGAAGAAGAATCAGGTGGTTGTTGGTAAC | + |
Preference number: 3 (lower is better) Translates to: QNYYCGSSLQGH*SKKKNQVVVGN Trigger: GTTACCAACAACCACCTGATTCTTCTTCTTGGAGCAGTGACCTTGAAGGCTAGAACCACAGTAATAGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTAAAACCAGGCTGGCCTaGAACTCAGATTTGTCTGCC | + |
Preference number: 3 (lower is better) Translates to: SQTSLISNPQRPHIIKQIKTRLA*NSDLSA Trigger: GGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTT...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
3UTR-3UTR CAA 90 bp | GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTAAGTGCTACATCATTTaGTTAAGACCACAAAGGAAC | + |
Preference number: 3 (lower is better) Translates to: ACNFSIMGQGEQIQIPDTKCYII*LRPQRN Trigger: GTTCCTTTGTGGTCTTAACAAAATGATGTAGCACTT...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CAA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTCTGTCCTGCATAGCCTaGTGCTTCTCTGCATTGTCA | + |
Preference number: 3 (lower is better) Translates to: SQTSLISNPQRPHIIKQILSCIA*CFSALS Trigger: TGACAATGCAGAGAAGCACAAGGCTATGCAGGACAG...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 72 bp | GTAAGGACTAATAGGAGAGCTTTTCCAGCCATGAACTaGAACCTTAATAACAGGGTCTTCCAACAAACAATC | + |
Preference number: 3 (lower is better) Translates to: VRTNRRAFPAMN*NLNNRVFQQTI Trigger: GATTGTTTGTTGGAAGACCCTGTTATTAAGGTTGCAGTTCATGGCTGGAAAAGCTCTCCTATTAGTCCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CAA 90 bp | GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCACTTTCTTCCCTCTCTaGGCTACTTTCTACTTTCAT | + |
Preference number: 3 (lower is better) Translates to: DTDTHSEHEHIVIMRNKGTFFPL*ATFYFH Trigger: ATGAAAGTAGAAAGTAGCCAAGAGAGGGAAGAAAGT...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CAA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTTTGTGCTTCTCTGCATaGTCAGCTCTAGTTCTTGGC | + |
Preference number: 3 (lower is better) Translates to: SQTSLISNPQRPHIIKQILCFSA*SALVLG Trigger: GCCAAGAACTAGAGCTGACAATGCAGAGAAGCACAA...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR-3UTR CAA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTAGTGCACATATGAAATaGGGGAGTCAGTCATCACCC | + |
Preference number: 3 (lower is better) Translates to: SQTSLISNPQRPHIIKQISAHMK*GSQSSP Trigger: GGGTGATGACTGACTCCCCAATTTCATATGTGCACT...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR TCA 72 bp | GAACTAGGAGGAGAAATCATAACTTTGTCCATGTCATaGTGCAGTAGTTGCATTATTCCCTGCATAATGTCC | + |
Preference number: 3 (lower is better) Translates to: ELGGEIITLSMS*CSSCIIPCIMS Trigger: GGACATTATGCAGGGAATAATGCAACTACTGCATCATGACATGGACAAAGTTATGATTTCTCCTCCTAGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR TCA 72 bp | AATGTGAGAGGGAGTACATATACCATAGTGCACATATaGAATTGGGGAGTCAGTCATCACCCTTCTATTTTG | + |
Preference number: 3 (lower is better) Translates to: NVRGSTYTIVHI*NWGVSHHPSIL Trigger: CAAAATAGAAGGGTGATGACTGACTCCCCAATTTCATATGTGCACTATGGTATATGTACTCCCTCTCACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR TCA 72 bp | CTGTCAAGAGCATTAAACCAAACACACCAAATGTTGTaGCTCCAACTTCATAAAACAAACGCCAAATGGAAA | + |
Preference number: 3 (lower is better) Translates to: LSRALNQTHQML*LQLHKTNAKWK Trigger: TTTCCATTTGGCGTTTGTTTTATGAAGTTGGAGTCACAACATTTGGTGTGTTTGGTTTAATGCTCTTGACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR GCA 72 bp | CTACTTTCATGTGATTGGGGAGAGAGAAAGAATGGATaGCAGCTACATATGATATTTATACTTATGACCATG | + |
Preference number: 3 (lower is better) Translates to: LLSCDWGERKNG*QLHMIFILMTM Trigger: CATGGTCATAAGTATAAATATCATATGTAGCTGGCATCCATTCTTTCTCTCTCCCCAATCACATGAAAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR CCA 90 bp | TCCACTGCTCCCCCAGGTTCTGTCAAGCTGCTCAAAAGGATAAAGGGAGAGGAACCCGGGTGTGCCCATTaGTCAGGCATGCTGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: STAPPGSVKLLKRIKGEEPGCAH*SGMLLP Trigger: GGGCAGCAGCATGCCTGACCAATGGGCACACCCGGG...TTCCTCTCCCTTTATCCTTTTGAGCAGCTTGACAGAACCTGGGGGAGCAGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
||
CDS-3UTR TCA 90 bp | CGTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAATGTCCTCTGTCATCTGAGTCTGCCGAAGCGTaGGGCCACACTGGGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: RHHWSLVLPHRYECPLSSESAEA*GHTGKP Trigger: TGGCTTCCCAGTGTGGCCTCACGCTTCGGCAGACTC...AGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
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CDS-3UTR CCA 90 bp | GGACATTTCAACATAACCACACTGAAGGAGTCCCTGACCACCAAGCCAGCACTGAGCGTGAGGCCACACTaGGAAGCCAGCAGGACCATC | + |
Preference number: 4 (lower is better) Translates to: GHFNITTLKESLTTKPALSVRPH*EASRTI Trigger: GATGGTCCTGCTGGCTTCCCAGTGTGGCCTCACGCT...CAGTGCTGGCTTGGTGGTCAGGGACTCCTTCAGTGTGGTTATGTTGAAATGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR CCA 90 bp | CTTAGGTCTCCACTGTCTCAAGGGAATATAAAGACCCCAGGGTGGGCTGCAGGTCCCACGGCCACAAAATaGTGCACCACCTGCTCCTTG | + |
Preference number: 4 (lower is better) Translates to: LRSPLSQGNIKTPGWAAGPTATK*CTTCSL Trigger: CAAGGAGCAGGTGGTGCACCATTTTGTGGCCGTGGG...ACCTGCAGCCCACCCTGGGGTCTTTATATTCCCTTGAGACAGTGGAGACCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR TCA 90 bp | TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATGAGTCTGCCGAAGCGTaGGGCCACACTGGGAAGCCA | + |
Preference number: 4 (lower is better) Translates to: CLGPSSIDHTGLKLTEIHESAEA*GHTGKP Trigger: TGGCTTCCCAGTGTGGCCTCACGCTTCGGCAGACTC...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR CCA 90 bp | GTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAATGTCCTCTGTCATCTGAGCGTGAGGCCACACTaGGAAGCCAGCAGGACCATC | + |
Preference number: 4 (lower is better) Translates to: VITGVWFFHIATNVLCHLSVRPH*EASRTI Trigger: GATGGTCCTGCTGGCTTCCCAGTGTGGCCTCACGCT...CAGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
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CDS-3UTR TCA 90 bp | GCTCGTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAATGTCCTCTGTCACCAGCTCTGCCCATGTaGCATTGGGTGGTAACCAGT | + |
Preference number: 4 (lower is better) Translates to: ARHHWSLVLPHRYECPLSPALPM*HWVVTS Trigger: ACTGGTTACCACCCAATGTCACATGGGCAGAGCTGG...TGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
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3UTR CAA 72 bp | CAAGGACACCCACAGGTTTCTGCTCTACCCTCTGGCTaGGACAGCAGCAGAGAGGCTTCATCTAAGCTTAAG | + |
Preference number: 4 (lower is better) Translates to: QGHPQVSALPSG*DSSREASSKLK Trigger: CTTAAGCTTAGATGAAGCCTCTCTGCTGCTGTCCAAGCCAGAGGGTAGAGCAGAAACCTGTGGGTGTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 72 bp | ACCTGTCCTGGACTTGCTTGGAAAACCAGGCTGGCCTaGAACTCAGATTTGTCTGCCTTTGCCTCCCAAGTG | + |
Preference number: 4 (lower is better) Translates to: TCPGLAWKTRLA*NSDLSAFASQV Trigger: CACTTGGGAGGCAAAGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR GCA 90 bp | TTCAGAAACTGGCTCGTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAATACGGTCCTCCAGCTCTaGCCATGTGACATTGGGTGG | + |
Preference number: 4 (lower is better) Translates to: FRNWLVITGVWFFHIATNTVLQL*PCDIGW Trigger: CCACCCAATGTCACATGGGCAGAGCTGGAGGACCGT...ATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
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CDS-3UTR TCA 90 bp | TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCCCAGCTCTGCCCATGTaGCATTGGGTGGTAACCAGT | + |
Preference number: 4 (lower is better) Translates to: FTHYSSCAPPILSLSGWFPALPM*HWVVTS Trigger: ACTGGTTACCACCCAATGTCACATGGGCAGAGCTGG...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR GCA 90 bp | GTCCTCTGTCATCTGACCCTTATGCAGGAAACTGTAGAGCATGCGCAGGATGAGAACCAGTATGTCTCCTaGCACAGCCACTCACTCAAG | + |
Preference number: 4 (lower is better) Translates to: VLCHLTLMQETVEHAQDENQYVS*HSHSLK Trigger: CTTGAGTGAGTGGCTGTGGCAGGAGACATACTGGTT...CTCATCCTGCGCATGCTCTACAGTTTCCTGCATAAGGGTCAGATGACAGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
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3UTR CAA 72 bp | AAGGAACTTCCATGGAGAACAGTGGAAGGCCACCACTaGACTATTCCATGGAGAACAGTGGAAGGCCACCAC | + |
Preference number: 4 (lower is better) Translates to: KELPWRTVEGHH*TIPWRTVEGHH Trigger: GTGGTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAAGTTCCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 72 bp | GAAGATCCCATGGGGATAGGTCTGTCCTGCATAGCCTaGTGCTTCTCTGCATTGTCAGCTCTAGTTCTTGGC | + |
Preference number: 4 (lower is better) Translates to: EDPMGIGLSCIA*CFSALSALVLG Trigger: GCCAAGAACTAGAGCTGACAATGCAGAGAAGCACAAGGCTATGCAGGACAGACCTATCCCCATGGGATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR TCA 90 bp | TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATCAATGCGGAGCAAGTTaGCGCTGTAGGAGAAGCCTA | + |
Preference number: 4 (lower is better) Translates to: CLGPSSIDHTGLKLTEIHQCGAS*RCRRSL Trigger: TAGGCTTCTCCTACAGCGTCAACTTGCTCCGCATTG...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR GCA 90 bp | AGCATGCAGAGTACTGTGATTTCAGACTTGTGGTCACACCTTGTTTCCATCTCTACGGTCCTCCAGCTCTaGCCATGTGACATTGGGTGG | + |
Preference number: 4 (lower is better) Translates to: SMQSTVISDLWSHLVSISTVLQL*PCDIGW Trigger: CCACCCAATGTCACATGGGCAGAGCTGGAGGACCGT...AGAGATGGAAACAAGGTGTGACCACAAGTCTGAAATCACAGTACTCTGCATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR TCA 90 bp | TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATACACAGACGTGTAGATaGCCTGGGTGGGGAAGAATA | + |
Preference number: 4 (lower is better) Translates to: CLGPSSIDHTGLKLTEIHTQTCR*PGWGRI Trigger: TATTCTTCCCCACCCAGGTCATCTACACGTCTGTGT...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR CCA 90 bp | TCCACTGCTCCCCCAGGTTCTGTCAAGCTGCTCAAAAGGATAAAGGGAGAGGAATATCTTTCTCCTGATTaGATCCTGCACACCCATCCA | + |
Preference number: 4 (lower is better) Translates to: STAPPGSVKLLKRIKGEEYLSPD*ILHTHP Trigger: TGGATGGGTGTGCAGGATCCAATCAGGAGAAAGATA...TTCCTCTCCCTTTATCCTTTTGAGCAGCTTGACAGAACCTGGGGGAGCAGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR CCA 90 bp | GGACATTTCAACATAACCACACTGAAGGAGTCCCTGACCACCAAGCCAGCACTGATTCAGGGTCTGATGTaGGTAATTCTCCCAGCACAA | + |
Preference number: 4 (lower is better) Translates to: GHFNITTLKESLTTKPALIQGLM*VILPAQ Trigger: TTGTGCTGGGAGAATTACCCACATCAGACCCTGAAT...CAGTGCTGGCTTGGTGGTCAGGGACTCCTTCAGTGTGGTTATGTTGAAATGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 72 bp | AGTACCTGTTCCTTGACACACATGCACACACCCCCATaGTTTGTTTTGAAACTGGGCCCTGCTTTGTATCCC | + |
Preference number: 4 (lower is better) Translates to: STCSLTHMHTPP*FVLKLGPALYP Trigger: GGGATACAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGGGTGTGTGCATGTGTGTCAAGGAACAGGTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR CCA 90 bp | TTCAGAAACTGGCTCGTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAATTATCTTTCTCCTGATTaGATCCTGCACACCCATCCA | + |
Preference number: 4 (lower is better) Translates to: FRNWLVITGVWFFHIATNYLSPD*ILHTHP Trigger: TGGATGGGTGTGCAGGATCCAATCAGGAGAAAGATA...ATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
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3UTR CAA 72 bp | TCTATCTCATCTCACTACCTTGTTCTGTACGCAGAGTaGGCCCTCATTCTTGCCCCAGCATTTTTCCTTCCT | + |
Preference number: 4 (lower is better) Translates to: SISSHYLVLYAE*ALILAPAFFLP Trigger: AGGAAGGAAAAATGCTGGGGCAAGAATGAGGGCCAACTCTGCGTACAGAACAAGGTAGTGAGATGAGATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 72 bp | TCCTGCCTCAGCATGCAGAGTACTGTGATTTCAGACTaGTGGTCACACCTTGTTTCCATCTCTCAAGTTCTC | + |
Preference number: 4 (lower is better) Translates to: SCLSMQSTVISD*WSHLVSISQVL Trigger: GAGAACTTGAGAGATGGAAACAAGGTGTGACCACAAGTCTGAAATCACAGTACTCTGCATGCTGAGGCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 72 bp | CTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTaGGTTCTTTACTCTTCCATTTCTGTGTCACATGGA | + |
Preference number: 4 (lower is better) Translates to: LFLCSSHTVPFW*VLYSSISVSHG Trigger: TCCATGTGACACAGAAATGGAAGAGTAAAGAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 72 bp | AAGGTCACTGCTCCAAGAAGAAGAATCAGGTGGTTGTaGGTAACACGGGCACCTAACTTCATAGTTCCCATC | + |
Preference number: 4 (lower is better) Translates to: KVTAPRRRIRWL*VTRAPNFIVPI Trigger: GATGGGAACTATGAAGTTAGGTGCCCGTGTTACCAACAACCACCTGATTCTTCTTCTTGGAGCAGTGACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR TCA 90 bp | GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCCAAAGTGATCAGCAGTaGAAGGTAGAAGCCCAGCTC | + |
Preference number: 4 (lower is better) Translates to: DTDTHSEHEHIVIMRNKGQSDQQ*KVEAQL Trigger: GAGCTGGGCTTCTACCTTTCACTGCTGATCACTTTG...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR GCA 90 bp | GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCGTCTCCTCTGGACACTaGTTCATCCTGAGGAAGTAC | + |
Preference number: 4 (lower is better) Translates to: DTDTHSEHEHIVIMRNKGVSSGH*FILRKY Trigger: GTACTTCCTCAGGATGAAGCAGTGTCCAGAGGAGAC...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR CCA 90 bp | TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCCTTCACAGAATTTCTTaGATAAGGAAGGCCGATCCT | + |
Preference number: 4 (lower is better) Translates to: FTHYSSCAPPILSLSGWFLHRIS*IRKADP Trigger: AGGATCGGCCTTCCTTATCCAAGAAATTCTGTGAAG...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR CCA 90 bp | CAAGAGCACAATAAAGAAGTAGTAGCCAAAGAAGGGGCCCGAGTTCTTGATGGAATTCAGGGTCTGATGTaGGTAATTCTCCCAGCACAA | + |
Preference number: 4 (lower is better) Translates to: QEHNKEVVAKEGARVLDGIQGLM*VILPAQ Trigger: TTGTGCTGGGAGAATTACCCACATCAGACCCTGAAT...TCCATCAAGAACTCGGGCCCCTTCTTTGGCTACTACTTCTTTATTGTGCTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
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CDS-3UTR TCA 90 bp | TGCAAACTGATTGACTGGATTAAAAACTGCAAAGGAACTTCCATGGAGAACAGTAGAGCATGCGCAGGATaGGGCAGAACCAGTACACAT | + |
Preference number: 4 (lower is better) Translates to: CKLIDWIKNCKGTSMENSRACAG*GRTSTH Trigger: ATGTGTACTGGTTCTGCCTCATCCTGCGCATGCTCT...ACTGTTCTCCATGGAAGTTCCTTTGCAGTTTTTAATCCAGTCAATCAGTTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 72 bp | ACACCCCCATTGTTTGTTTTGAAACTGGGCCCTGCTTaGTATCCCAGGCTTATATGTTCTTCCTGTCTATTG | + |
Preference number: 4 (lower is better) Translates to: TPPLFVLKLGPA*YPRLICSSCLL Trigger: CAATAGACAGGAAGAACATATAAGCCTGGGATACAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 72 bp | AGATTGACACAGATACACATTCTGAACATGAACATATaGTCATCATGCGCAACAAGGGCTCAGTCCCTGCCT | + |
Preference number: 4 (lower is better) Translates to: RLTQIHILNMNI*SSCATRAQSLP Trigger: AGGCAGGGACTGAGCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTCAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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3UTR CAA 72 bp | TGTGTGGAATCTGGCTGGCAAACTCTCCTCCCTAGATaGACACAGATACACATTCTGAACATGAACATATTG | + |
Preference number: 4 (lower is better) Translates to: CVESGWQTLLPR*TQIHILNMNIL Trigger: CAATATGTTCATGTTCAGAATGTGTATCTGTGTCAATCTAGGGAGGAGAGTTTGCCAGCCAGATTCCACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR GCA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTAACCAGTATGTCTCCTaGCACAGCCACTCACTCAAG | + |
Preference number: 4 (lower is better) Translates to: SQTSLISNPQRPHIIKQINQYVS*HSHSLK Trigger: CTTGAGTGAGTGGCTGTGGCAGGAGACATACTGGTT...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS TCA 90 bp | ACAGCCACCAGGACCAGAGCCACTGGGAAGGCAGCAAGCACGTGGTaGGGGTGGGCGAACACCAGGCCATCACGGTCCTCCAGCTCTGCC | + |
Preference number: 5 (lower is better) Translates to: TATRTRATGKAASTW*GWANTRPSRSSSSA Trigger: GGCAGAGCTGGAGGACCGTGATGGCCTGGTGTTCGCCCACCCTCACCACGTGCTTGCTGCCTTCCCAGTGGCTCTGGTCCTGGTGGCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008350.16 ENSMUST00000176042.2 ENSMUST00000176130.10 |
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CDS TCA 90 bp | GATAAGGAAGGCCGATCCTGGTTCCGACGTCTCCTGAACCAGCGTTaGGTCTGCCGAAGCGTGAGGCCACACTGGGAAGCCAGCAGGACC | + |
Preference number: 5 (lower is better) Translates to: DKEGRSWFRRLLNQR*VCRSVRPHWEASRT Trigger: GGTCCTGCTGGCTTCCCAGTGTGGCCTCACGCTTCGGCAGACTCAACGCTGGTTCAGGAGACGTCGGAACCAGGATCGGCCTTCCTTATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |
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CDS TCA 90 bp | GGTGGGCGAACACCAGGCCATCACGGTCCTCCAGCTCTGCCCATGTaGCATTGGGTGGTAACCAGTATGTCTCCTGCCACAGCCACTCAC | + |
Preference number: 5 (lower is better) Translates to: GGRTPGHHGPPALPM*HWVVTSMSPATATH Trigger: GTGAGTGGCTGTGGCAGGAGACATACTGGTTACCACCCAATGTCACATGGGCAGAGCTGGAGGACCGTGATGGCCTGGTGTTCGCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008350.16 ENSMUST00000176042.2 ENSMUST00000176130.10 |
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CDS-3UTR CAA 90 bp | TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCGCCCGGGTGTGCCCATaGGTCAGGCATGCTGCTGCC | + |
Preference number: 5 (lower is better) Translates to: SHLHLDPDYPVWNLAGKLARVCP*VRHAAA Trigger: GGCAGCAGCATGCCTGACCAATGGGCACACCCGGGC...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS GCA 90 bp | CCACACTGGGAAGCCAGCAGGACCATCTGTGTCTCCTCTGGACACTaGTTCATCCTGAGGAAGTACTTCTCCAGCACCGGGTTGGGCTTT | + |
Preference number: 5 (lower is better) Translates to: PHWEASRTICVSSGH*FILRKYFSSTGLGF Trigger: AAAGCCCAACCCGGTGCTGGAGAAGTACTTCCTCAGGATGAAGCAGTGTCCAGAGGAGACACAGATGGTCCTGCTGGCTTCCCAGTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |
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CDS GCA 90 bp | TTCTCCAGCACCGGGTTGGGCTTTATCTTTCTCCTGATTGGATCCTaGACACCCATCCACCGGCTCAGGGGCAAGGCCACAAATCTCTCA | + |
Preference number: 5 (lower is better) Translates to: FSSTGLGFIFLLIGS*TPIHRLRGKATNLS Trigger: TGAGAGATTTGTGGCCTTGCCCCTGAGCCGGTGGATGGGTGTGCAGGATCCAATCAGGAGAAAGATAAAGCCCAACCCGGTGCTGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |
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CDS TCA 90 bp | AGCAGTCATGCAACAACAGTACCACAGCGCCAATGCGGAGCAAGTTaGCGCTGTAGGAGAAGCCTATCAGTCCCACGGCCACAAAATGGT | + |
Preference number: 5 (lower is better) Translates to: SSHATTVPQRQCGAS*RCRRSLSVPRPQNG Trigger: ACCATTTTGTGGCCGTGGGACTGATAGGCTTCTCCTACAGCGTCAACTTGCTCCGCATTGGCGCTGTGGTACTGTTGTTGCATGACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR CAA 90 bp | GGTTGGTGCTCCTTCCCAGGCTGGCCTCAAACCTACAATCTTCCTGCCTCAGCAGCTTCACAGAATTTCTaGGATAAGGAAGGCCGATCC | + |
Preference number: 5 (lower is better) Translates to: GWCSFPGWPQTYNLPASAASQNF*DKEGRS Trigger: GGATCGGCCTTCCTTATCCAAGAAATTCTGTGAAGC...TGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR CAA 90 bp | TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCCGGCTCCGCGGGCCATaGGTAACAGCTACTCTAGAC | + |
Preference number: 5 (lower is better) Translates to: FTHYSSCAPPILSLSGWFRLRGP*VTATLD Trigger: GTCTAGAGTAGCTGTTACCAATGGCCCGCGGAGCCG...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS CCA 90 bp | CCCAGCACAATGATGGCGACCACAACCATGATTCATGGTAGAGGATaGAGGTGCCACCCACGAAGGAACACAGATAGAAGACAAACCTCC | + |
Preference number: 5 (lower is better) Translates to: PSTMMATTTMIHGRG*RCHPRRNTDRRQTS Trigger: GGAGGTTTGTCTTCTATCTGTGTTCCTTCGTGGGTGGCACCTCCATCCTCTACCATGAATCATGGTTGTGGTCGCCATCATTGTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |
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CDS CCA 90 bp | AGACCCTCGAGCCATCCCATTCTTCAGCTGTGGACCTTCAGAAACTaGCTCGTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAAT | + |
Preference number: 5 (lower is better) Translates to: RPSSHPILQLWTFRN*LVITGVWFFHIATN Trigger: ATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAAGGTCCACAGCTGAAGAATGGGATGGCTCGAGGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS TCA 90 bp | CTTGAAGTCCTTGCGTTTGACATCAAAGGGCAAAGTGATCAGCAGTaGAAGGTAGAAGCCCAGCTCCAGGAGGTACCACCAGTACAGGGA | + |
Preference number: 5 (lower is better) Translates to: LEVLAFDIKGQSDQQ*KVEAQLQEVPPVQG Trigger: TCCCTGTACTGGTGGTACCTCCTGGAGCTGGGCTTCTACCTTTCACTGCTGATCACTTTGCCCTTTGATGTCAAACGCAAGGACTTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS GCA 90 bp | ACAATGATGGCGACCACAACCATGATTCATGGTAGAGGATGGAGGTaGCACCCACGAAGGAACACAGATAGAAGACAAACCTCCAGCAGG | + |
Preference number: 5 (lower is better) Translates to: TMMATTTMIHGRGWR*HPRRNTDRRQTSSR Trigger: CCTGCTGGAGGTTTGTCTTCTATCTGTGTTCCTTCGTGGGTGGCACCTCCATCCTCTACCATGAATCATGGTTGTGGTCGCCATCATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |
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CDS-3UTR CAA 90 bp | CTGGTTCTTCCACATCGCTACGAATGTCCTCTGTCATCTGACCCTTATGCAGGATCTGCCCATGTGACATaGGGTGGTAACCAGTATGTC | + |
Preference number: 5 (lower is better) Translates to: LVLPHRYECPLSSDPYAGSAHVT*GGNQYV Trigger: GACATACTGGTTACCACCCAATGTCACATGGGCAGA...TCCTGCATAAGGGTCAGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
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CDS-3UTR CAA 90 bp | CGTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAATGTCCTCTGTCATCTGCTTCACAGAATTTCTaGGATAAGGAAGGCCGATCC | + |
Preference number: 5 (lower is better) Translates to: RHHWSLVLPHRYECPLSSASQNF*DKEGRS Trigger: GGATCGGCCTTCCTTATCCAAGAAATTCTGTGAAGC...AGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176130.10 |
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CDS-3UTR CAA 90 bp | GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTAAGGGGCCCGAGTTCTaGATGGAGTCATACACAGAC | + |
Preference number: 5 (lower is better) Translates to: ACNFSIMGQGEQIQIPDTKGPEF*MESYTD Trigger: GTCTGTGTATGACTCCATCAAGAACTCGGGCCCCTT...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR CAA 90 bp | GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTTCTGCCCATGTGACATaGGGTGGTAACCAGTATGTC | + |
Preference number: 5 (lower is better) Translates to: ACNFSIMGQGEQIQIPDTSAHVT*GGNQYV Trigger: GACATACTGGTTACCACCCAATGTCACATGGGCAGA...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS-3UTR CAA 90 bp | AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTTTGAAGTCCTTGCGTTaGACATCAAAGGGCAAAGTG | + |
Preference number: 5 (lower is better) Translates to: SQTSLISNPQRPHIIKQILKSLR*TSKGKV Trigger: CACTTTGCCCTTTGATGTCAAACGCAAGGACTTCAA...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS TCA 72 bp | AGGACCAGAGCCACTGGGAAGGCAGCAAGCACGTGGTaGGGGTGGGCGAACACCAGGCCATCACGGTCCTCC | + |
Preference number: 6 (lower is better) Translates to: RTRATGKAASTW*GWANTRPSRSS Trigger: GGAGGACCGTGATGGCCTGGTGTTCGCCCACCCTCACCACGTGCTTGCTGCCTTCCCAGTGGCTCTGGTCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008350.16 ENSMUST00000176042.2 ENSMUST00000176130.10 |
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CDS TCA 72 bp | GGCCGATCCTGGTTCCGACGTCTCCTGAACCAGCGTTaGGTCTGCCGAAGCGTGAGGCCACACTGGGAAGCC | + |
Preference number: 6 (lower is better) Translates to: GRSWFRRLLNQR*VCRSVRPHWEA Trigger: GGCTTCCCAGTGTGGCCTCACGCTTCGGCAGACTCAACGCTGGTTCAGGAGACGTCGGAACCAGGATCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |
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CDS CAA 72 bp | AGGCCGATCCTGGTTCCGACGTCTCCTGAACCAGCGTaGAGTCTGCCGAAGCGTGAGGCCACACTGGGAAGC | + |
Preference number: 6 (lower is better) Translates to: RPILVPTSPEPA*SLPKREATLGS Trigger: GCTTCCCAGTGTGGCCTCACGCTTCGGCAGACTCAACGCTGGTTCAGGAGACGTCGGAACCAGGATCGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |
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CDS CAA 72 bp | TTGGTCAGGCATGCTGCTGCCCGGCTCCGCGGGCCATaGGTAACAGCTACTCTAGACCCTCGAGCCATCCCA | + |
Preference number: 6 (lower is better) Translates to: LVRHAAARLRGP*VTATLDPRAIP Trigger: TGGGATGGCTCGAGGGTCTAGAGTAGCTGTTACCAATGGCCCGCGGAGCCGGGCAGCAGCATGCCTGACCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS CAA 90 bp | GTGTGCCCATTGGTCAGGCATGCTGCTGCCCGGCTCCGCGGGCCATaGGTAACAGCTACTCTAGACCCTCGAGCCATCCCATTCTTCAGC | + |
Preference number: 6 (lower is better) Translates to: VCPLVRHAAARLRGP*VTATLDPRAIPFFS Trigger: GCTGAAGAATGGGATGGCTCGAGGGTCTAGAGTAGCTGTTACCAATGGCCCGCGGAGCCGGGCAGCAGCATGCCTGACCAATGGGCACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS CAA 90 bp | GCGAACACCAGGCCATCACGGTCCTCCAGCTCTGCCCATGTGACATaGGGTGGTAACCAGTATGTCTCCTGCCACAGCCACTCACTCAAG | + |
Preference number: 6 (lower is better) Translates to: ANTRPSRSSSSAHVT*GGNQYVSCHSHSLK Trigger: CTTGAGTGAGTGGCTGTGGCAGGAGACATACTGGTTACCACCCAATGTCACATGGGCAGAGCTGGAGGACCGTGATGGCCTGGTGTTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008350.16 ENSMUST00000176042.2 ENSMUST00000176130.10 |
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CDS TCA 72 bp | ACTTCTCCAGCACCGGGTTGGGCTTTATCTTTCTCCTaGTTGGATCCTGCACACCCATCCACCGGCTCAGGG | + |
Preference number: 6 (lower is better) Translates to: TSPAPGWALSFS*LDPAHPSTGSG Trigger: CCCTGAGCCGGTGGATGGGTGTGCAGGATCCAATCAGGAGAAAGATAAAGCCCAACCCGGTGCTGGAGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |
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CDS GCA 72 bp | GAAGCCAGCAGGACCATCTGTGTCTCCTCTGGACACTaGTTCATCCTGAGGAAGTACTTCTCCAGCACCGGG | + |
Preference number: 6 (lower is better) Translates to: EASRTICVSSGH*FILRKYFSSTG Trigger: CCCGGTGCTGGAGAAGTACTTCCTCAGGATGAAGCAGTGTCCAGAGGAGACACAGATGGTCCTGCTGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |
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CDS GCA 72 bp | CCTATCAGTCCCACGGCCACAAAATGGTGCACCACCTaGTCCTTGAAGTCCTTGCGTTTGACATCAAAGGGC | + |
Preference number: 6 (lower is better) Translates to: PISPTATKWCTT*SLKSLRLTSKG Trigger: GCCCTTTGATGTCAAACGCAAGGACTTCAAGGAGCAGGTGGTGCACCATTTTGTGGCCGTGGGACTGATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS CCA 72 bp | TACTCTAGACCCTCGAGCCATCCCATTCTTCAGCTGTaGACCTTCAGAAACTGGCTCGTCATCACTGGAGTC | + |
Preference number: 6 (lower is better) Translates to: YSRPSSHPILQL*TFRNWLVITGV Trigger: GACTCCAGTGATGACGAGCCAGTTTCTGAAGGTCCACAGCTGAAGAATGGGATGGCTCGAGGGTCTAGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS CAA 72 bp | AGTCCCACGGCCACAAAATGGTGCACCACCTGCTCCTaGAAGTCCTTGCGTTTGACATCAAAGGGCAAAGTG | + |
Preference number: 6 (lower is better) Translates to: SPTATKWCTTCS*KSLRLTSKGKV Trigger: CACTTTGCCCTTTGATGTCAAACGCAAGGACTTCAAGGAGCAGGTGGTGCACCATTTTGTGGCCGTGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008350.16 |
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CDS TCA 72 bp | CTTGCGTTTGACATCAAAGGGCAAAGTGATCAGCAGTaGAAGGTAGAAGCCCAGCTCCAGGAGGTACCACCA | + |
Preference number: 6 (lower is better) Translates to: LAFDIKGQSDQQ*KVEAQLQEVPP Trigger: TGGTGGTACCTCCTGGAGCTGGGCTTCTACCTTTCACTGCTGATCACTTTGCCCTTTGATGTCAAACGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |
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CDS GCA 72 bp | GCGACCACAACCATGATTCATGGTAGAGGATGGAGGTaGCACCCACGAAGGAACACAGATAGAAGACAAACC | + |
Preference number: 6 (lower is better) Translates to: ATTTMIHGRGWR*HPRRNTDRRQT Trigger: GGTTTGTCTTCTATCTGTGTTCCTTCGTGGGTGGCACCTCCATCCTCTACCATGAATCATGGTTGTGGTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |
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CDS CCA 72 bp | AGAAGACAAACCTCCAGCAGGCTTCACAGAATTTCTTaGATAAGGAAGGCCGATCCTGGTTCCGACGTCTCC | + |
Preference number: 6 (lower is better) Translates to: RRQTSSRLHRIS*IRKADPGSDVS Trigger: GGAGACGTCGGAACCAGGATCGGCCTTCCTTATCCAAGAAATTCTGTGAAGCCTGCTGGAGGTTTGTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |
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CDS CCA 72 bp | ATGATGGCGACCACAACCATGATTCATGGTAGAGGATaGAGGTGCCACCCACGAAGGAACACAGATAGAAGA | + |
Preference number: 6 (lower is better) Translates to: MMATTTMIHGRG*RCHPRRNTDRR Trigger: TCTTCTATCTGTGTTCCTTCGTGGGTGGCACCTCCATCCTCTACCATGAATCATGGTTGTGGTCGCCATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008350.16 ENSMUST00000176130.10 |