RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CERS4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000008206

Ensembl transcript IDs: ENSMUST00000008350.16, ENSMUST00000176042.2, ENSMUST00000176130.10

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCATCATGCGCAACAAGGGCTCAGTCCCTGCCTTCTACTGTGTGCTaGGATATCTGGGGGCTCCGGCCCTGGGAAGCTTCACCATGGCTT +
Preference number: 1 (lower is better)
Translates to: SSCATRAQSLPSTVC*DIWGLRPWEASPWL
Trigger: AAGCCATGGTGAAGCTTCCCAGGGCCGGAGCCCCCAGATATCCCAGCACACAGTAGAAGGCAGGGACTGAGCCCTTGTTGCGCATGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp AACCAGGTGTGGTGGTGGTGGCCTGTGCCTGTAATTTCAGCATTATaGGGCAGGGGGAACAAATACAAATCCCTGACACTCCCTGGCCAG +
Preference number: 1 (lower is better)
Translates to: NQVWWWWPVPVISAL*GRGNKYKSLTLPGQ
Trigger: CTGGCCAGGGAGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGCACAGGCCACCACCACCACACCTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 90 bp TGGCCATCCCAACACAGCCACTTGCATCCTACAGCAGACCACATTTaGATGGTGCTCACGGTGGCTGTTTCCACTGTCTTGGCCAAAACT +
Preference number: 1 (lower is better)
Translates to: WPSQHSHLHPTADHI*MVLTVAVSTVLAKT
Trigger: AGTTTTGGCCAAGACAGTGGAAACAGCCACCGTGAGCACCATTCAAATGTGGTCTGCTGTAGGATGCAAGTGGCTGTGTTGGGATGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 90 bp AGGTTGGTGCTCCTTCCCAGGCTGGCCTCAAACCTACAATCTTCCTaGCTCAGCATGCAGAGTACTGTGATTTCAGACTTGTGGTCACAC +
Preference number: 1 (lower is better)
Translates to: RLVLLPRLASNLQSS*LSMQSTVISDLWSH
Trigger: GTGTGACCACAAGTCTGAAATCACAGTACTCTGCATGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 90 bp TGGACTTGCTTGGAAAACCAGGCTGGCCTTGAACTCAGATTTGTCTaGCTTTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACCACCAT +
Preference number: 1 (lower is better)
Translates to: WTCLENQAGLELRFV*LCLPSAGIKGVHHH
Trigger: ATGGTGGTGCACACCTTTAATCCCAGCACTTGGGAGGCAAAGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp CTTCAGCTGTGGACCTTCAGAAACTGGCTCGTCATCACTGGAGTCTaGTTCTTCCACATCGCTACGAATGTCCTCTGTCATCTGACCCTT +
Preference number: 1 (lower is better)
Translates to: LQLWTFRNWLVITGV*FFHIATNVLCHLTL
Trigger: AAGGGTCAGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAAGGTCCACAGCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
3UTR GCA 90 bp CCCAACACAGCCACTTGCATCCTACAGCAGACCACATTTGAATGGTaGTCACGGTGGCTGTTTCCACTGTCTTGGCCAAAACTATTACTG +
Preference number: 1 (lower is better)
Translates to: PNTATCILQQTTFEW*SRWLFPLSWPKLLL
Trigger: CAGTAATAGTTTTGGCCAAGACAGTGGAAACAGCCACCGTGAGCACCATTCAAATGTGGTCTGCTGTAGGATGCAAGTGGCTGTGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp ACTATTCCATGGAGAACAGTGGAAGGCCACCACTTGACTATTCCATaGAGAACAGTGGAAGGCCACCACTTGACAGAGGTGACTAGGAAG +
Preference number: 1 (lower is better)
Translates to: TIPWRTVEGHHLTIP*RTVEGHHLTEVTRK
Trigger: CTTCCTAGTCACCTCTGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAATAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp TCCCATTCTTCAGCTGTGGACCTTCAGAAACTGGCTCGTCATCACTaGAGTCTGGTTCTTCCACATCGCTACGAATGTCCTCTGTCATCT +
Preference number: 1 (lower is better)
Translates to: SHSSAVDLQKLARHH*SLVLPHRYECPLSS
Trigger: AGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAAGGTCCACAGCTGAAGAATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
3UTR TCA 90 bp GTCCTGGAGAGCTACTATGAAGTAGAACAAAGTGAAGGCACTGACTaGGGAGCAGGGAGTATCTTCATGCTGTGGTGCTATACAGGCAAG +
Preference number: 1 (lower is better)
Translates to: VLESYYEVEQSEGTD*GAGSIFMLWCYTGK
Trigger: CTTGCCTGTATAGCACCACAGCATGAAGATACTCCCTGCTCCTCAGTCAGTGCCTTCACTTTGTTCTACTTCATAGTAGCTCTCCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp GAACTTCCATGGAGAACAGTGGAAGGCCACCACTTGACTATTCCATaGAGAACAGTGGAAGGCCACCACTTGACTATTCCATGGAGAACA +
Preference number: 1 (lower is better)
Translates to: ELPWRTVEGHHLTIP*RTVEGHHLTIPWRT
Trigger: TGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAAGTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp ATAACAGGGTCTTCCAACAAACAATCACATAAAAACCAGGTGTGGTaGTGGTGGCCTGTGCCTGTAATTTCAGCATTATGGGGCAGGGGG +
Preference number: 1 (lower is better)
Translates to: ITGSSNKQSHKNQVW*WWPVPVISALWGRG
Trigger: CCCCCTGCCCCATAATGCTGAAATTACAGGCACAGGCCACCACCACCACACCTGGTTTTTATGTGATTGTTTGTTGGAAGACCCTGTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 90 bp CTGAGGCATATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCACTaGTGGCCGACTAGGCCATCTTCTGCTACATATGCAGATAGTGAC +
Preference number: 1 (lower is better)
Translates to: LRHIKFARPMGLSFH*WPTRPSSATYADSD
Trigger: GTCACTATCTGCATATGTAGCAGAAGATGGCCTAGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 90 bp CTGTCATCTGACCCTTATGCAGGAAACTGTAGAGCATGCGCAGGATaGGGCAGAACCAGTACACATGAAGAATCTGTAGCATCACCAAGA +
Preference number: 1 (lower is better)
Translates to: LSSDPYAGNCRACAG*GRTSTHEESVASPR
Trigger: TCTTGGTGATGCTACAGATTCTTCATGTGTACTGGTTCTGCCTCATCCTGCGCATGCTCTACAGTTTCCTGCATAAGGGTCAGATGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
3UTR GCA 90 bp TGTCTTGGCCAAAACTATTACTGTGGTTCTAGCCTTCAAGGTCACTaGTCCAAGAAGAAGAATCAGGTGGTTGTTGGTAACACGGGCACC +
Preference number: 1 (lower is better)
Translates to: CLGQNYYCGSSLQGH*SKKKNQVVVGNTGT
Trigger: GGTGCCCGTGTTACCAACAACCACCTGATTCTTCTTCTTGGAGCAGTGACCTTGAAGGCTAGAACCACAGTAATAGTTTTGGCCAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp TTTGTTGTTGTAGTTGTTTTTCTAGGTTGGTGCTCCTTCCCAGGCTaGCCTCAAACCTACAATCTTCCTGCCTCAGCATGCAGAGTACTG +
Preference number: 1 (lower is better)
Translates to: FVVVVVFLGWCSFPG*PQTYNLPASACRVL
Trigger: CAGTACTCTGCATGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACCTAGAAAAACAACTACAACAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 90 bp TCCCCACTCTCTGATTCTCATTCTTCCATGACACTCAGTTCCTCTTaGATACTCCCAAAGATGGCAAGGTCTAACCATACATGGATCCTC +
Preference number: 1 (lower is better)
Translates to: SPLSDSHSSMTLSSS*ILPKMARSNHTWIL
Trigger: GAGGATCCATGTATGGTTAGACCTTGCCATCTTTGGGAGTATGCAAGAGGAACTGAGTGTCATGGAAGAATGAGAATCAGAGAGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 90 bp TGTTTCAAGACAGGGTTTCTCTATGTAACAGACCTGTCCTGGACTTaGTTGGAAAACCAGGCTGGCCTTGAACTCAGATTTGTCTGCCTT +
Preference number: 1 (lower is better)
Translates to: CFKTGFLYVTDLSWT*LENQAGLELRFVCL
Trigger: AAGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAGGTCTGTTACATAGAGAAACCCTGTCTTGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 90 bp CGCATAAACACGAATGACTCGCTCATTCACTCATTACTCTTCCTGTaGTCCTCCCATACTGTCCCTTTCTGGTTGGTTCTTTACTCTTCC +
Preference number: 1 (lower is better)
Translates to: RINTNDSLIHSLLFL*SSHTVPFWLVLYSS
Trigger: GGAAGAGTAAAGAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAATGAGCGAGTCATTCGTGTTTATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 90 bp AGATCCCATGGGGATAGGTCTGTCCTGCATAGCCTTGTGCTTCTCTaGATTGTCAGCTCTAGTTCTTGGCATCTTTCTGAAGCAGAAAAA +
Preference number: 1 (lower is better)
Translates to: RSHGDRSVLHSLVLL*IVSSSSWHLSEAEK
Trigger: TTTTTCTGCTTCAGAAAGATGCCAAGAACTAGAGCTGACAATGCAGAGAAGCACAAGGCTATGCAGGACAGACCTATCCCCATGGGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 90 bp GATTATGAAGATCCCATGGGGATAGGTCTGTCCTGCATAGCCTTGTaGTTCTCTGCATTGTCAGCTCTAGTTCTTGGCATCTTTCTGAAG +
Preference number: 1 (lower is better)
Translates to: DYEDPMGIGLSCIAL*FSALSALVLGIFLK
Trigger: CTTCAGAAAGATGCCAAGAACTAGAGCTGACAATGCAGAGAAGCACAAGGCTATGCAGGACAGACCTATCCCCATGGGATCTTCATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 90 bp TTCACCAGATGTGGATCAGTGTATGCAGTGCTTAGACCATCAATATaGCAACACAACTCGGGACCACTGCCTCCAAAAGTCTATGACCTT +
Preference number: 1 (lower is better)
Translates to: FTRCGSVYAVLRPSI*QHNSGPLPPKVYDL
Trigger: AAGGTCATAGACTTTTGGAGGCAGTGGTCCCGAGTTGTGTTGGCATATTGATGGTCTAAGCACTGCATACACTGATCCACATCTGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 90 bp TTGGTCTCCAGTGCAGGACTTCTAGGCTGTATCTTTGCCCCCAAGTaGTACATCATTTTGTTAAGACCACAAAGGAACTCTATTCAGGGT +
Preference number: 1 (lower is better)
Translates to: LVSSAGLLGCIFAPK*YIILLRPQRNSIQG
Trigger: ACCCTGAATAGAGTTCCTTTGTGGTCTTAACAAAATGATGTAGCACTTGGGGGCAAAGATACAGCCTAGAAGTCCTGCACTGGAGACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 90 bp AGATTGACACAGATACACATTCTGAACATGAACATATTGTCATCATaGGCAACAAGGGCTCAGTCCCTGCCTTCTACTGTGTGCTGGGAT +
Preference number: 1 (lower is better)
Translates to: RLTQIHILNMNILSS*ATRAQSLPSTVCWD
Trigger: ATCCCAGCACACAGTAGAAGGCAGGGACTGAGCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTCAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp TTAATAACAGGGTCTTCCAACAAACAATCACATAAAAACCAGGTGTaGTGGTGGTGGCCTGTGCCTGTAATTTCAGCATTATGGGGCAGG +
Preference number: 1 (lower is better)
Translates to: LITGSSNKQSHKNQV*WWWPVPVISALWGR
Trigger: CCTGCCCCATAATGCTGAAATTACAGGCACAGGCCACCACCACCACACCTGGTTTTTATGTGATTGTTTGTTGGAAGACCCTGTTATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 90 bp CTTTATTTTTGGATGTTGCCTGAGATGACCTCTTTCCCCACTCTCTaGTTCTCATTCTTCCATGACACTCAGTTCCTCTTGCATACTCCC +
Preference number: 1 (lower is better)
Translates to: LYFWMLPEMTSFPTL*FSFFHDTQFLLHTP
Trigger: GGGAGTATGCAAGAGGAACTGAGTGTCATGGAAGAATGAGAATCAGAGAGTGGGGAAAGAGGTCATCTCAGGCAACATCCAAAAATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp TTGTTTCCATCTCTCAAGTTCTCTAGAAGCTGTTTCTCTCATCAGTaGCCCTCTGTCTTCTGTCTTGAATACCCTTTCCTGTTCTTTCCC +
Preference number: 1 (lower is better)
Translates to: LFPSLKFSRSCFSHQ*PSVFCLEYPFLFFP
Trigger: GGGAAAGAACAGGAAAGGGTATTCAAGACAGAAGACAGAGGGCCACTGATGAGAGAAACAGCTTCTAGAGAACTTGAGAGATGGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 90 bp TCACATGGCCACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTaGACAAAGGAGAGCTGGAAGGAGCCCGTTATATCCAACAAAGTA +
Preference number: 1 (lower is better)
Translates to: SHGHTGKNRFNEQAS*TKESWKEPVISNKV
Trigger: TACTTTGTTGGATATAACGGGCTCCTTCCAGCTCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTGGCCATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp TATTTTTGTTTCAAGACAGGGTTTCTCTATGTAACAGACCTGTCCTaGACTTGCTTGGAAAACCAGGCTGGCCTTGAACTCAGATTTGTC +
Preference number: 1 (lower is better)
Translates to: YFCFKTGFLYVTDLS*TCLENQAGLELRFV
Trigger: GACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAGGTCTGTTACATAGAGAAACCCTGTCTTGAAACAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp ACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTaGTTCTTTACTCTTCCATTTCTGTGTCACATGGATTACATTCTT +
Preference number: 1 (lower is better)
Translates to: THYSSCAPPILSLSG*FFTLPFLCHMDYIL
Trigger: AAGAATGTAATCCATGTGACACAGAAATGGAAGAGTAAAGAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp AAGAACAAGGAAGAAATAATGAACACTAATGTGAAGTGTAGACTTTaGGTGAGAATGTGTCACTGTGGACTGTACCACACACAGCACTGT +
Preference number: 1 (lower is better)
Translates to: KNKEEIMNTNVKCRL*VRMCHCGLYHTQHC
Trigger: ACAGTGCTGTGTGTGGTACAGTCCACAGTGACACATTCTCACCCAAAGTCTACACTTCACATTAGTGTTCATTATTTCTTCCTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 90 bp CTGAAGGAACAAAGGAAGGCTATCAGGCTAACCTACTCAAATAAGTaGGTGAAGAAGAGGGGCTGTGAACAAAAGAATAATGAACATGAA +
Preference number: 1 (lower is better)
Translates to: LKEQRKAIRLTYSNK*VKKRGCEQKNNEHE
Trigger: TTCATGTTCATTATTCTTTTGTTCACAGCCCCTCTTCTTCACCCACTTATTTGAGTAGGTTAGCCTGATAGCCTTCCTTTGTTCCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 90 bp GGCTACTTTCTACTTTCATGTGATTGGGGAGAGAGAAAGAATGGATaGCAGCTACATATGATATTTATACTTATGACCATGGCTTTAGTC +
Preference number: 1 (lower is better)
Translates to: GYFLLSCDWGERKNG*QLHMIFILMTMALV
Trigger: GACTAAAGCCATGGTCATAAGTATAAATATCATATGTAGCTGGCATCCATTCTTTCTCTCTCCCCAATCACATGAAAGTAGAAAGTAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 90 bp CGTATAATTGAACTAGGAGGAGAAATCATAACTTTGTCCATGTCATaGTGCAGTAGTTGCATTATTCCCTGCATAATGTCCTTTTATTTG +
Preference number: 1 (lower is better)
Translates to: RIIELGGEIITLSMS*CSSCIIPCIMSFYL
Trigger: CAAATAAAAGGACATTATGCAGGGAATAATGCAACTACTGCATCATGACATGGACAAAGTTATGATTTCTCCTCCTAGTTCAATTATACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp GGTTGGTGCTCCTTCCCAGGCTGGCCTCAAACCTACAATCTTCCTGCCTCAGCATTCTGCTCTACCCTCTaGCTTGGACAGCAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: GWCSFPGWPQTYNLPASAFCSTL*LGQQQR
Trigger: TCTCTGCTGCTGTCCAAGCCAGAGGGTAGAGCAGAA...TGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCCCCCTTTCTTGGCCCTaGCGTTCCCCTGTACTGAGG +
Preference number: 2 (lower is better)
Translates to: SHLHLDPDYPVWNLAGKLPLSWP*RSPVLR
Trigger: CCTCAGTACAGGGGAACGCCAGGGCCAAGAAAGGGG...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 90 bp TGTCCTGGACTTGCTTGGAAAACCAGGCTGGCCTTGAACTCAGATTaGTCTGCCTTTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACC +
Preference number: 2 (lower is better)
Translates to: CPGLAWKTRLALNSD*SAFASQVLGLKVCT
Trigger: GGTGCACACCTTTAATCCCAGCACTTGGGAGGCAAAGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 90 bp TTGGCCATCCCAACACAGCCACTTGCATCCTACAGCAGACCACATTaGAATGGTGCTCACGGTGGCTGTTTCCACTGTCTTGGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: LAIPTQPLASYSRPH*NGAHGGCFHCLGQN
Trigger: GTTTTGGCCAAGACAGTGGAAACAGCCACCGTGAGCACCATTCAAATGTGGTCTGCTGTAGGATGCAAGTGGCTGTGTTGGGATGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTCCTTCTACTGTGTGCTaGGATATCTGGGGGCTCCGG +
Preference number: 2 (lower is better)
Translates to: ACNFSIMGQGEQIQIPDTPSTVC*DIWGLR
Trigger: CCGGAGCCCCCAGATATCCCAGCACACAGTAGAAGG...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR TCA 90 bp TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCCACCAGCCCAGCATCTaGATATTCACAATGCTGGCG +
Preference number: 2 (lower is better)
Translates to: FTHYSSCAPPILSLSGWFHQPSI*IFTMLA
Trigger: CGCCAGCATTGTGAATATTCAGATGCTGGGCTGGTG...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 90 bp CTAGCCTTCAAGGTCACTGCTCCAAGAAGAAGAATCAGGTGGTTGTaGGTAACACGGGCACCTAACTTCATAGTTCCCATCTGCACCTTG +
Preference number: 2 (lower is better)
Translates to: LAFKVTAPRRRIRWL*VTRAPNFIVPICTL
Trigger: CAAGGTGCAGATGGGAACTATGAAGTTAGGTGCCCGTGTTACCAACAACCACCTGATTCTTCTTCTTGGAGCAGTGACCTTGAAGGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 90 bp GTTCTAGCCTTCAAGGTCACTGCTCCAAGAAGAAGAATCAGGTGGTaGTTGGTAACACGGGCACCTAACTTCATAGTTCCCATCTGCACC +
Preference number: 2 (lower is better)
Translates to: VLAFKVTAPRRRIRW*LVTRAPNFIVPICT
Trigger: GGTGCAGATGGGAACTATGAAGTTAGGTGCCCGTGTTACCAACAACCACCTGATTCTTCTTCTTGGAGCAGTGACCTTGAAGGCTAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR TCA 90 bp TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCAAACCAGGCTGGCCTTaGACTCAGATTTGTCTGCCT +
Preference number: 2 (lower is better)
Translates to: FTHYSSCAPPILSLSGWFKPGWP*TQICLP
Trigger: AGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTT...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTCTGGGATTAAAGGTGTaGACCACCATACCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: ACNFSIMGQGEQIQIPDTLGLKV*TTIPGP
Trigger: TGGGCCAGGTATGGTGGTGCACACCTTTAATCCCAG...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCCACTTGACTATTCCATaGAGAACAGTGGAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: SHLHLDPDYPVWNLAGKLHLTIP*RTVEGH
Trigger: GTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTG...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 90 bp CTCTTCTGCAGTACCTGTTCCTTGACACACATGCACACACCCCCATaGTTTGTTTTGAAACTGGGCCCTGCTTTGTATCCCAGGCTTATA +
Preference number: 2 (lower is better)
Translates to: LFCSTCSLTHMHTPP*FVLKLGPALYPRLI
Trigger: TATAAGCCTGGGATACAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGGGTGTGTGCATGTGTGTCAAGGAACAGGTACTGCAGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR TCA 90 bp TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATATCTTGATGTGGCAGTaGGGAATCCTGTCAACAGAG +
Preference number: 2 (lower is better)
Translates to: CLGPSSIDHTGLKLTEIHILMWQ*GILSTE
Trigger: CTCTGTTGACAGGATTCCTCACTGCCACATCAAGAT...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR TCA 90 bp GGACATTTCAACATAACCACACTGAAGGAGTCCCTGACCACCAAGCCAGCACTGATTCTCATTCTTCCATaGCACTCAGTTCCTCTTGCA +
Preference number: 2 (lower is better)
Translates to: GHFNITTLKESLTTKPALILILP*HSVPLA
Trigger: TGCAAGAGGAACTGAGTGTCATGGAAGAATGAGAAT...CAGTGCTGGCTTGGTGGTCAGGGACTCCTTCAGTGTGGTTATGTTGAAATGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATCAGGGAGTATCTTCATaGTGTGGTGCTATACAGGCA +
Preference number: 2 (lower is better)
Translates to: CLGPSSIDHTGLKLTEIHQGVSS*CGAIQA
Trigger: TGCCTGTATAGCACCACAGCATGAAGATACTCCCTG...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATAGTCATGAGTCACCATaGCAGGCTCTGCTCTTTGTA +
Preference number: 2 (lower is better)
Translates to: CLGPSSIDHTGLKLTEIHSHESP*QALLFV
Trigger: TACAAAGAGCAGAGCCTGGCATGGTGACTCATGACT...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTGCAAAGGAACTTCCATaGAGAACAGTGGAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: ACNFSIMGQGEQIQIPDTAKELP*RTVEGH
Trigger: GTGGCCTTCCACTGTTCTCCATGGAAGTTCCTTTGC...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 90 bp CTGGGCCCTGCTTTGTATCCCAGGCTTATATGTTCTTCCTGTCTATaGGCTTCTTCCTCCCTAGTGTTAAATGACAGTCATGAGTCACCA +
Preference number: 2 (lower is better)
Translates to: LGPALYPRLICSSCL*ASSSLVLNDSHESP
Trigger: TGGTGACTCATGACTGTCATTTAACACTAGGGAGGAAGAAGCCAATAGACAGGAAGAACATATAAGCCTGGGATACAAAGCAGGGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 90 bp CACATGCACACACCCCCATTGTTTGTTTTGAAACTGGGCCCTGCTTaGTATCCCAGGCTTATATGTTCTTCCTGTCTATTGGCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: HMHTPPLFVLKLGPA*YPRLICSSCLLASS
Trigger: GGAAGAAGCCAATAGACAGGAAGAACATATAAGCCTGGGATACAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGGGTGTGTGCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 90 bp AGTACCTGTTCCTTGACACACATGCACACACCCCCATTGTTTGTTTaGAAACTGGGCCCTGCTTTGTATCCCAGGCTTATATGTTCTTCC +
Preference number: 2 (lower is better)
Translates to: STCSLTHMHTPPLFV*KLGPALYPRLICSS
Trigger: GGAAGAACATATAAGCCTGGGATACAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGGGTGTGTGCATGTGTGTCAAGGAACAGGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 90 bp CTCCTCCCTAGATTGACACAGATACACATTCTGAACATGAACATATaGTCATCATGCGCAACAAGGGCTCAGTCCCTGCCTTCTACTGTG +
Preference number: 2 (lower is better)
Translates to: LLPRLTQIHILNMNI*SSCATRAQSLPSTV
Trigger: CACAGTAGAAGGCAGGGACTGAGCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTCAATCTAGGGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR TCA 90 bp GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTGCATGCAGAGTACTGTaGTTTCAGACTTGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: ACNFSIMGQGEQIQIPDTACRVL*FQTCGH
Trigger: GTGACCACAAGTCTGAAATCACAGTACTCTGCATGC...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCACACCCACAGGTTTCTaGTCTACCCTCTGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: DTDTHSEHEHIVIMRNKGTPTGF*STLWLG
Trigger: TCCAAGCCAGAGGGTAGAGCAGAAACCTGTGGGTGT...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATACACTCAGTTCCTCTTaGATACTCCCAAAGATGGCA +
Preference number: 2 (lower is better)
Translates to: CLGPSSIDHTGLKLTEIHTLSSS*ILPKMA
Trigger: TGCCATCTTTGGGAGTATGCAAGAGGAACTGAGTGT...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp ATGGCCACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTGAACAAAGGAGAGACCTGTCCTGGACTTaGTTGGAAAACCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: MATQERIDLMNRLAEQRRDLSWT*LENQAG
Trigger: GCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAGGTC...TCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTCCCCAAGCTACAGCCTaGGGTTGGCTCAGGCCAGAT +
Preference number: 2 (lower is better)
Translates to: SQTSLISNPQRPHIIKQIPQATA*GWLRPD
Trigger: ATCTGGCCTGAGCCAACCCCAGGCTGTAGCTTGGGG...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATCTGTTGACGTTTTATTaGTCCTTGGAGCCAAAGCTC +
Preference number: 2 (lower is better)
Translates to: CLGPSSIDHTGLKLTEIHLLTFY*SLEPKL
Trigger: GAGCTTTGGCTCCAAGGACCAATAAAACGTCAACAG...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCACTCAGCCTCCATCTTaGAGGAGGATGTTTTCCTAT +
Preference number: 2 (lower is better)
Translates to: FTHYSSCAPPILSLSGWFTQPPS*RRMFSY
Trigger: ATAGGAAAACATCCTCCTCCAAGATGGAGGCTGAGT...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp GGACATTTCAACATAACCACACTGAAGGAGTCCCTGACCACCAAGCCAGCACTGCTGTCCCTTTCTGGTTaGTTCTTTACTCTTCCATTT +
Preference number: 2 (lower is better)
Translates to: GHFNITTLKESLTTKPALLSLSG*FFTLPF
Trigger: AAATGGAAGAGTAAAGAACCAACCAGAAAGGGACAG...CAGTGCTGGCTTGGTGGTCAGGGACTCCTTCAGTGTGGTTATGTTGAAATGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR TCA 90 bp CCTTTCCTATCGGTTGCTTTGTCTTCTTGTCTCTTTCACAAGTCTCTATGCATTGGAGAGGAACTGCTGTaGAGGGAACTTAAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: PFLSVALSSCLFHKSLCIGEELL*RELKLW
Trigger: CCAGAGCTTAAGTTCCCTTCACAGCAGTTCCTCTCC...AATGCATAGAGACTTGTGAAAGAGACAAGAAGACAAAGCAACCGATAGGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCAGGTTTCAGACTTTATaGAGACTGGCAAAGAGATCA +
Preference number: 2 (lower is better)
Translates to: SHLHLDPDYPVWNLAGKLRFQTL*RLAKRS
Trigger: TGATCTCTTTGCCAGTCTCCATAAAGTCTGAAACCT...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCTTTACTGATGTCTTCTaGGTCTATATGCCCAAGTGT +
Preference number: 2 (lower is better)
Translates to: SHLHLDPDYPVWNLAGKLFTDVF*VYMPKC
Trigger: ACACTTGGGCATATAGACCCAGAAGACATCAGTAAA...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR TCA 90 bp GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCCCCCATTGTTTGTTTTaGAACTGGGCCCTGCTTTGT +
Preference number: 2 (lower is better)
Translates to: DTDTHSEHEHIVIMRNKGPHCLF*NWALLC
Trigger: ACAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGG...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR TCA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTGGAGAGGCTTACACGTaGTGGGCAAAGGGAGCAATG +
Preference number: 2 (lower is better)
Translates to: SQTSLISNPQRPHIIKQIGEAYT*WAKGAM
Trigger: CATTGCTCCCTTTGCCCATCACGTGTAAGCCTCTCC...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR TCA 90 bp GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCAATGAACAGGCTAGCTaGACAAAGGAGAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: DTDTHSEHEHIVIMRNKGNEQAS*TKESWK
Trigger: CTTCCAGCTCTCCTTTGTTCAGCTAGCCTGTTCATT...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCGAACTCAGATTTGTCTaGCTTTGCCTCCCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: DTDTHSEHEHIVIMRNKGELRFV*LCLPSA
Trigger: AGCACTTGGGAGGCAAAGGCAGACAAATCTGAGTTC...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp CCTTTCCTATCGGTTGCTTTGTCTTCTTGTCTCTTTCACAAGTCTCTATGCATTATAAAGACCCCAGGGTaGGCTGCAGGTTGCTTTAAG +
Preference number: 2 (lower is better)
Translates to: PFLSVALSSCLFHKSLCIIKTPG*AAGCFK
Trigger: CTTAAAGCAACCTGCAGCCCACCCTGGGGTCTTTAT...AATGCATAGAGACTTGTGAAAGAGACAAGAAGACAAAGCAACCGATAGGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCCATTTCTGTGTCACATaGATTACATTCTTCAACTCG +
Preference number: 2 (lower is better)
Translates to: SHLHLDPDYPVWNLAGKLHFCVT*ITFFNS
Trigger: CGAGTTGAAGAATGTAATCCATGTGACACAGAAATG...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp GGACATTTCAACATAACCACACTGAAGGAGTCCCTGACCACCAAGCCAGCACTGTGCAAACTGATTGACTaGATTAAAAACTGCAAAGGA +
Preference number: 2 (lower is better)
Translates to: GHFNITTLKESLTTKPALCKLID*IKNCKG
Trigger: TCCTTTGCAGTTTTTAATCCAGTCAATCAGTTTGCA...CAGTGCTGGCTTGGTGGTCAGGGACTCCTTCAGTGTGGTTATGTTGAAATGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCGAGAGAAAGAATGGATaGCAGCTACATATGATATTT +
Preference number: 2 (lower is better)
Translates to: SHLHLDPDYPVWNLAGKLERKNG*QLHMIF
Trigger: AAATATCATATGTAGCTGGCATCCATTCTTTCTCTC...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTGAATGGTGCTCACGGTaGCTGTTTCCACTGTCTTGG +
Preference number: 2 (lower is better)
Translates to: SQTSLISNPQRPHIIKQIEWCSR*LFPLSW
Trigger: CCAAGACAGTGGAAACAGCCACCGTGAGCACCATTC...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR TCA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTTGGAAGGCCACCACTTaGCTATTCCATGGAGAACAG +
Preference number: 2 (lower is better)
Translates to: SQTSLISNPQRPHIIKQIWKATT*LFHGEQ
Trigger: CTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCA...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp AGCATGCAGAGTACTGTGATTTCAGACTTGTGGTCACACCTTGTTTCCATCTCTTCCTTTCCTATCGGTTaGTTTGTCTTCTTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: SMQSTVISDLWSHLVSISSFPIG*FVFLSL
Trigger: AAGAGACAAGAAGACAAAGCAACCGATAGGAAAGGA...AGAGATGGAAACAAGGTGTGACCACAAGTCTGAAATCACAGTACTCTGCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTGGGATAGGTCTGTCCTaGATAGCCTTGTGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: SQTSLISNPQRPHIIKQIGIGLS*IALCFS
Trigger: AGAGAAGCACAAGGCTATGCAGGACAGACCTATCCC...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 90 bp CTCTATGCATTCTCTACCAATGCACCCTCTGTTTCTCCTAAACTGTaGTTCTCTCAACAGAAGCCACAGTTCTCTTCCTTTTTCTCATAT +
Preference number: 2 (lower is better)
Translates to: LYAFSTNAPSVSPKL*FSQQKPQFSSFFSY
Trigger: ATATGAGAAAAAGGAAGAGAACTGTGGCTTCTGTTGAGAGAACAACAGTTTAGGAGAAACAGAGGGTGCATTGGTAGAGAATGCATAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR TCA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTACTCAAATAAGTGGGTaGAGAAGAGGGGCTGTGAAC +
Preference number: 2 (lower is better)
Translates to: SQTSLISNPQRPHIIKQITQISG*RRGAVN
Trigger: GTTCACAGCCCCTCTTCTTCACCCACTTATTTGAGT...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp TGCAAACTGATTGACTGGATTAAAAACTGCAAAGGAACTTCCATGGAGAACAGTACATTTCCAATGCTATaGCAAAAGTCCCCCATCTCC +
Preference number: 2 (lower is better)
Translates to: CKLIDWIKNCKGTSMENSTFPML*QKSPIS
Trigger: GGAGATGGGGGACTTTTGGCATAGCATTGGAAATGT...ACTGTTCTCCATGGAAGTTCCTTTGCAGTTTTTAATCCAGTCAATCAGTTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp ATGGCCACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTGAACAAAGGAGAAGTATCTTCATGCTGTaGTGCTATACAGGCAAGAGT +
Preference number: 2 (lower is better)
Translates to: MATQERIDLMNRLAEQRRSIFML*CYTGKS
Trigger: ACTCTTGCCTGTATAGCACCACAGCATGAAGATACT...TCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTGGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp ATGGCCACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTGAACAAAGGAGACATACTGTCCCTTTCTaGTTGGTTCTTTACTCTTCC +
Preference number: 2 (lower is better)
Translates to: MATQERIDLMNRLAEQRRHTVPF*LVLYSS
Trigger: GGAAGAGTAAAGAACCAACCAGAAAGGGACAGTATG...TCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTGGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR TCA 90 bp TGCAAACTGATTGACTGGATTAAAAACTGCAAAGGAACTTCCATGGAGAACAGTCTCTGTCTTCTGTCTTaGATACCCTTTCCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: CKLIDWIKNCKGTSMENSLCLLS*IPFPVL
Trigger: AAGAACAGGAAAGGGTATTCAAGACAGAAGACAGAG...ACTGTTCTCCATGGAAGTTCCTTTGCAGTTTTTAATCCAGTCAATCAGTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp TGCAAACTGATTGACTGGATTAAAAACTGCAAAGGAACTTCCATGGAGAACAGTTTTCACAAGTCTCTATaGATTCTCTACCAATGCACC +
Preference number: 2 (lower is better)
Translates to: CKLIDWIKNCKGTSMENSFHKSL*ILYQCT
Trigger: GGTGCATTGGTAGAGAATGCATAGAGACTTGTGAAA...ACTGTTCTCCATGGAAGTTCCTTTGCAGTTTTTAATCCAGTCAATCAGTTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR GCA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTCTAGATCCAACTCTATaGTCTCTCCAAGAAACACAC +
Preference number: 2 (lower is better)
Translates to: SQTSLISNPQRPHIIKQILDPTL*SLQETH
Trigger: GTGTGTTTCTTGGAGAGAGCATAGAGTTGGATCTAG...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTCTGTTTCCACTGTCTTaGCCAAAACTATTACTGTGG +
Preference number: 2 (lower is better)
Translates to: SQTSLISNPQRPHIIKQILFPLS*PKLLLW
Trigger: CCACAGTAATAGTTTTGGCCAAGACAGTGGAAACAG...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CCA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTGTCAGCTCTAGTTCTTaGCATCTTTCTGAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: SQTSLISNPQRPHIIKQIVSSSS*HLSEAE
Trigger: TTCTGCTTCAGAAAGATGCCAAGAACTAGAGCTGAC...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 90 bp GCTGTGAAATACTCTGTATGGTATTTCAGTGAGGTCATTACATATTaGTCAATACTTACCAAATGTAAGGCACAAAATATGAACCCCAGT +
Preference number: 2 (lower is better)
Translates to: AVKYSVWYFSEVITY*SILTKCKAQNMNPS
Trigger: ACTGGGGTTCATATTTTGTGCCTTACATTTGGTAAGTATTGACAAATATGTAATGACCTCACTGAAATACCATACAGAGTATTTCACAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp GGGCTCCGGCCCTGGGAAGCTTCACCATGGCTTTCCTaGCCAGGAATCTACCCGACACTTTCTATGAAGCCA +
Preference number: 3 (lower is better)
Translates to: GLRPWEASPWLS*PGIYPTLSMKP
Trigger: TGGCTTCATAGAAAGTGTCGGGTAGATTCCTGGCCAGGAAAGCCATGGTGAAGCTTCCCAGGGCCGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp GGTTGGTGCTCCTTCCCAGGCTGGCCTCAAACCTACAATCTTCCTGCCTCAGCACACTCAGCCTCCATCTaGGAGGAGGATGTTTTCCTA +
Preference number: 3 (lower is better)
Translates to: GWCSFPGWPQTYNLPASAHSASI*EEDVFL
Trigger: TAGGAAAACATCCTCCTCCAAGATGGAGGCTGAGTG...TGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 72 bp CCTGTCCTGGACTTGCTTGGAAAACCAGGCTGGCCTTaGACTCAGATTTGTCTGCCTTTGCCTCCCAAGTGC +
Preference number: 3 (lower is better)
Translates to: PVLDLLGKPGWP*TQICLPLPPKC
Trigger: GCACTTGGGAGGCAAAGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp ACATATTGTCATCATGCGCAACAAGGGCTCAGTCCCTaGCTTCTACTGTGTGCTGGGATATCTGGGGGCTCC +
Preference number: 3 (lower is better)
Translates to: TYCHHAQQGLSP*LLLCAGISGGS
Trigger: GGAGCCCCCAGATATCCCAGCACACAGTAGAAGGCAGGGACTGAGCCCTTGTTGCGCATGATGACAATATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp GGACATTTCAACATAACCACACTGAAGGAGTCCCTGACCACCAAGCCAGCACTGCTGTCCTGGACTTGCTaGGAAAACCAGGCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: GHFNITTLKESLTTKPALLSWTC*ENQAGL
Trigger: AAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAG...CAGTGCTGGCTTGGTGGTCAGGGACTCCTTCAGTGTGGTTATGTTGAAATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp CCCAGAATCACCAGCCCAGCATCTGAATATTCACAATaGTGGCGGCAACCCCTCAACATCAGTCCAAGGTTG +
Preference number: 3 (lower is better)
Translates to: PRITSPASEYSQ*WRQPLNISPRL
Trigger: CAACCTTGGACTGATGTTGAGGGGTTGCCGCCAGCATTGTGAATATTCAGATGCTGGGCTGGTGATTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp CAAGGGAATATAAAGACCCCAGGGTGGGCTGCAGGTTaGTTTAAGCAAGGGACTACAAGGACACCCACAGGT +
Preference number: 3 (lower is better)
Translates to: QGNIKTPGWAAG*FKQGTTRTPTG
Trigger: ACCTGTGGGTGTCCTTGTAGTCCCTTGCTTAAAGCAACCTGCAGCCCACCCTGGGGTCTTTATATTCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp TGGAGAACAGTGGAAGGCCACCACTTGACTATTCCATaGAGAACAGTGGAAGGCCACCACTTGACAGAGGTG +
Preference number: 3 (lower is better)
Translates to: WRTVEGHHLTIP*RTVEGHHLTEV
Trigger: CACCTCTGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp GGTTGGTGCTCCTTCCCAGGCTGGCCTCAAACCTACAATCTTCCTGCCTCAGCAGCCAGGCTCTGCTCTTaGTACCAAAAGTCTTTATTT +
Preference number: 3 (lower is better)
Translates to: GWCSFPGWPQTYNLPASAARLCS*YQKSLF
Trigger: AAATAAAGACTTTTGGTACAAAGAGCAGAGCCTGGC...TGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 72 bp AGGAACTTCCATGGAGAACAGTGGAAGGCCACCACTTaGCTATTCCATGGAGAACAGTGGAAGGCCACCACT +
Preference number: 3 (lower is better)
Translates to: RNFHGEQWKATT*LFHGEQWKATT
Trigger: AGTGGTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAAGTTCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp AAGGACACCCACAGGTTTCTGCTCTACCCTCTGGCTTaGACAGCAGCAGAGAGGCTTCATCTAAGCTTAAGA +
Preference number: 3 (lower is better)
Translates to: KDTHRFLLYPLA*TAAERLHLSLR
Trigger: TCTTAAGCTTAGATGAAGCCTCTCTGCTGCTGTCCAAGCCAGAGGGTAGAGCAGAAACCTGTGGGTGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp TCTCCACTGTCTCAAGGGAATATAAAGACCCCAGGGTaGGCTGCAGGTTGCTTTAAGCAAGGGACTACAAGG +
Preference number: 3 (lower is better)
Translates to: SPLSQGNIKTPG*AAGCFKQGTTR
Trigger: CCTTGTAGTCCCTTGCTTAAAGCAACCTGCAGCCCACCCTGGGGTCTTTATATTCCCTTGAGACAGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp GTAGTTGTTTTTCTAGGTTGGTGCTCCTTCCCAGGCTaGCCTCAAACCTACAATCTTCCTGCCTCAGCATGC +
Preference number: 3 (lower is better)
Translates to: VVVFLGWCSFPG*PQTYNLPASAC
Trigger: GCATGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACCTAGAAAAACAACTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp TCAGCTGTGGACCTTCAGAAACTGGCTCGTCATCACTaGAGTCTGGTTCTTCCACATCGCTACGAATGTCCT +
Preference number: 3 (lower is better)
Translates to: SAVDLQKLARHH*SLVLPHRYECP
Trigger: AGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAAGGTCCACAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
3UTR-3UTR CAA 90 bp TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATCAGATTTGTCTGCCTTaGCCTCCCAAGTGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: CLGPSSIDHTGLKLTEIHQICLP*PPKCWD
Trigger: ATCCCAGCACTTGGGAGGCAAAGGCAGACAAATCTG...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTTCCCAACACAGCCACTaGCATCCTACAGCAGACCAC +
Preference number: 3 (lower is better)
Translates to: ACNFSIMGQGEQIQIPDTSQHSH*HPTADH
Trigger: GTGGTCTGCTGTAGGATGCAAGTGGCTGTGTTGGGA...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp TTGGAAAACCAGGCTGGCCTTGAACTCAGATTTGTCTaGCTTTGCCTCCCAAGTGCTGGGATTAAAGGTGTG +
Preference number: 3 (lower is better)
Translates to: LENQAGLELRFV*LCLPSAGIKGV
Trigger: CACACCTTTAATCCCAGCACTTGGGAGGCAAAGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp ACACTGGCCTCAAACTCACAGAGATCCATCTGTATCTaGCTCCCAAGTGCTGGGAGTAAAGACATGTCACCA +
Preference number: 3 (lower is better)
Translates to: TLASNSQRSICI*LPSAGSKDMSP
Trigger: TGGTGACATGTCTTTACTCCCAGCACTTGGGAGGCAGATACAGATGGATCTCTGTGAGTTTGAGGCCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp TGGAGAACAGTGGAAGGCCACCACTTGACTATTCCATaGAGAACAGTGGAAGGCCACCACTTGACTATTCCA +
Preference number: 3 (lower is better)
Translates to: WRTVEGHHLTIP*RTVEGHHLTIP
Trigger: TGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp TGGACCTTCAGAAACTGGCTCGTCATCACTGGAGTCTaGTTCTTCCACATCGCTACGAATGTCCTCTGTCAT +
Preference number: 3 (lower is better)
Translates to: WTFRNWLVITGV*FFHIATNVLCH
Trigger: ATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAAGGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
3UTR-3UTR CAA 90 bp TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCGACACTCAGTTCCTCTaGCATACTCCCAAAGATGGC +
Preference number: 3 (lower is better)
Translates to: FTHYSSCAPPILSLSGWFDTQFL*HTPKDG
Trigger: GCCATCTTTGGGAGTATGCAAGAGGAACTGAGTGTC...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 72 bp GACCCTTATGCAGGAAACTGTAGAGCATGCGCAGGATaGGGCAGAACCAGTACACATGAAGAATCTGTAGCA +
Preference number: 3 (lower is better)
Translates to: DPYAGNCRACAG*GRTSTHEESVA
Trigger: TGCTACAGATTCTTCATGTGTACTGGTTCTGCCTCATCCTGCGCATGCTCTACAGTTTCCTGCATAAGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
3UTR GCA 72 bp CTGGATTATGAAGATCCCATGGGGATAGGTCTGTCCTaGATAGCCTTGTGCTTCTCTGCATTGTCAGCTCTA +
Preference number: 3 (lower is better)
Translates to: LDYEDPMGIGLS*IALCFSALSAL
Trigger: TAGAGCTGACAATGCAGAGAAGCACAAGGCTATGCAGGACAGACCTATCCCCATGGGATCTTCATAATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp TGTGGATCAGTGTATGCAGTGCTTAGACCATCAATATaGCAACACAACTCGGGACCACTGCCTCCAAAAGTC +
Preference number: 3 (lower is better)
Translates to: CGSVYAVLRPSI*QHNSGPLPPKV
Trigger: GACTTTTGGAGGCAGTGGTCCCGAGTTGTGTTGGCATATTGATGGTCTAAGCACTGCATACACTGATCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp TTCAAGACAGGGTTTCTCTATGTAACAGACCTGTCCTaGACTTGCTTGGAAAACCAGGCTGGCCTTGAACTC +
Preference number: 3 (lower is better)
Translates to: FKTGFLYVTDLS*TCLENQAGLEL
Trigger: GAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAGGTCTGTTACATAGAGAAACCCTGTCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp TGCAAACTGATTGACTGGATTAAAAACTGCAAAGGAACTTCCATGGAGAACAGTGCTCTACCCTCTGGCTaGGACAGCAGCAGAGAGGCT +
Preference number: 3 (lower is better)
Translates to: CKLIDWIKNCKGTSMENSALPSG*DSSREA
Trigger: AGCCTCTCTGCTGCTGTCCAAGCCAGAGGGTAGAGC...ACTGTTCTCCATGGAAGTTCCTTTGCAGTTTTTAATCCAGTCAATCAGTTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp ATGGCCACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTGAACAAAGGAGAGTGGAAGGCCACCACTaGACAGAGGTGACTAGGAAG +
Preference number: 3 (lower is better)
Translates to: MATQERIDLMNRLAEQRRVEGHH*TEVTRK
Trigger: CTTCCTAGTCACCTCTGTCAAGTGGTGGCCTTCCAC...TCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCCTGAACATGAACATATaGTCATCATGCGCAACAAGG +
Preference number: 3 (lower is better)
Translates to: SHLHLDPDYPVWNLAGKLLNMNI*SSCATR
Trigger: CCTTGTTGCGCATGATGACAATATGTTCATGTTCAG...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 72 bp TGGATGTTGCCTGAGATGACCTCTTTCCCCACTCTCTaGTTCTCATTCTTCCATGACACTCAGTTCCTCTTG +
Preference number: 3 (lower is better)
Translates to: WMLPEMTSFPTL*FSFFHDTQFLL
Trigger: CAAGAGGAACTGAGTGTCATGGAAGAATGAGAATCAGAGAGTGGGGAAAGAGGTCATCTCAGGCAACATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 72 bp CTCTTCACAGATGCATTAGCTAGGCTAGATGTCCCATaGGCTCCTGAGACAAATTCTGTCTCTGTCTCCCAT +
Preference number: 3 (lower is better)
Translates to: LFTDALARLDVP*APETNSVSVSH
Trigger: ATGGGAGACAGAGACAGAATTTGTCTCAGGAGCTCATGGGACATCTAGCCTAGCTAATGCATCTGTGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp GTGAAGGCACTGACTGAGGAGCAGGGAGTATCTTCATaGTGTGGTGCTATACAGGCAAGAGTTGACATAAAT +
Preference number: 3 (lower is better)
Translates to: VKALTEEQGVSS*CGAIQARVDIN
Trigger: ATTTATGTCAACTCTTGCCTGTATAGCACCACAGCATGAAGATACTCCCTGCTCCTCAGTCAGTGCCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp ACGAATGACTCGCTCATTCACTCATTACTCTTCCTGTaGTCCTCCCATACTGTCCCTTTCTGGTTGGTTCTT +
Preference number: 3 (lower is better)
Translates to: TNDSLIHSLLFL*SSHTVPFWLVL
Trigger: AAGAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAATGAGCGAGTCATTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp CTTGGTCTCCAGTGCAGGACTTCTAGGCTGTATCTTTaGCCCCAAGTGCTACATCATTTTGTTAAGACCACA +
Preference number: 3 (lower is better)
Translates to: LGLQCRTSRLYL*PQVLHHFVKTT
Trigger: TGTGGTCTTAACAAAATGATGTAGCACTTGGGGGCAAAGATACAGCCTAGAAGTCCTGCACTGGAGACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp CTATCTCATCTCACTACCTTGTTCTGTACGCAGAGTTaGCCCTCATTCTTGCCCCAGCATTTTTCCTTCCTT +
Preference number: 3 (lower is better)
Translates to: LSHLTTLFCTQS*PSFLPQHFSFL
Trigger: AAGGAAGGAAAAATGCTGGGGCAAGAATGAGGGCCAACTCTGCGTACAGAACAAGGTAGTGAGATGAGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp ACATATGCAGATAGTGACACGAGCTCCAGGGGGTACTaGTTAGCTCATATTGTTGTTCCATCTATGGGGTTG +
Preference number: 3 (lower is better)
Translates to: TYADSDTSSRGY*LAHIVVPSMGL
Trigger: CAACCCCATAGATGGAACAACAATATGAGCTAACCAGTACCCCCTGGAGCTCGTGTCACTATCTGCATATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp CATTTGTGCTGCTACATTCAGCCTTTATCTGGGTCCTaGGAATCCAAACTCACATCATCAGGCTTGTGTAGC +
Preference number: 3 (lower is better)
Translates to: HLCCYIQPLSGS*ESKLTSSGLCS
Trigger: GCTACACAAGCCTGATGATGTGAGTTTGGATTCCCAGGACCCAGATAAAGGCTGAATGTAGCAGCACAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp TCCAACAAACAATCACATAAAAACCAGGTGTGGTGGTaGTGGCCTGTGCCTGTAATTTCAGCATTATGGGGC +
Preference number: 3 (lower is better)
Translates to: SNKQSHKNQVWW*WPVPVISALWG
Trigger: GCCCCATAATGCTGAAATTACAGGCACAGGCCACCACCACCACACCTGGTTTTTATGTGATTGTTTGTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTCTCACATCATCAGGCTaGTGTAGCAAGTGCATTTAC +
Preference number: 3 (lower is better)
Translates to: ACNFSIMGQGEQIQIPDTLTSSG*CSKCIY
Trigger: GTAAATGCACTTGCTACACAAGCCTGATGATGTGAG...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 72 bp AGCTACTATGAAGTAGAACAAAGTGAAGGCACTGACTaGGGAGCAGGGAGTATCTTCATGCTGTGGTGCTAT +
Preference number: 3 (lower is better)
Translates to: SYYEVEQSEGTD*GAGSIFMLWCY
Trigger: ATAGCACCACAGCATGAAGATACTCCCTGCTCCTCAGTCAGTGCCTTCACTTTGTTCTACTTCATAGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp CAGATACACATTCTGAACATGAACATATTGTCATCATaGGCAACAAGGGCTCAGTCCCTGCCTTCTACTGTG +
Preference number: 3 (lower is better)
Translates to: QIHILNMNILSS*ATRAQSLPSTV
Trigger: CACAGTAGAAGGCAGGGACTGAGCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp TCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTaGTTCTTTACTCTTCCATTTCTGTGTCACATGGAT +
Preference number: 3 (lower is better)
Translates to: SSCAPPILSLSG*FFTLPFLCHMD
Trigger: ATCCATGTGACACAGAAATGGAAGAGTAAAGAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCTGTTCTTCCTGTCTATaGGCTTCTTCCTCCCTAGTG +
Preference number: 3 (lower is better)
Translates to: DTDTHSEHEHIVIMRNKGCSSCL*ASSSLV
Trigger: CACTAGGGAGGAAGAAGCCAATAGACAGGAAGAACA...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCAAACTGGGCCCTGCTTaGTATCCCAGGCTTATATGT +
Preference number: 3 (lower is better)
Translates to: DTDTHSEHEHIVIMRNKGKLGPA*YPRLIC
Trigger: ACATATAAGCCTGGGATACAAAGCAGGGCCCAGTTT...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp ATGGCCACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTGAACAAAGGAGACCCCCATTGTTTGTTTaGAAACTGGGCCCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: MATQERIDLMNRLAEQRRPPLFV*KLGPAL
Trigger: CAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGGG...TCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTGGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTACTGTCCCTTTCTGGTaGGTTCTTTACTCTTCCATT +
Preference number: 3 (lower is better)
Translates to: ACNFSIMGQGEQIQIPDTTVPFW*VLYSSI
Trigger: AATGGAAGAGTAAAGAACCAACCAGAAAGGGACAGT...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCGCATTTGGAAGACTATaGGGAGGGCAAGTTGAAAGG +
Preference number: 3 (lower is better)
Translates to: DTDTHSEHEHIVIMRNKGAFGRL*GGQVER
Trigger: CCTTTCAACTTGCCCTCCCAATAGTCTTCCAAATGC...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 72 bp CACACAGGAAAGAATAGATTTAATGAACAGGCTAGCTaGACAAAGGAGAGCTGGAAGGAGCCCGTTATATCC +
Preference number: 3 (lower is better)
Translates to: HTGKNRFNEQAS*TKESWKEPVIS
Trigger: GGATATAACGGGCTCCTTCCAGCTCTCCTTTGTTCAGCTAGCCTGTTCATTAAATCTATTCTTTCCTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp GAAAATACTACTGCTCAAACCTCACTACATTTATTTTaGAAGCGAGCGAGCGAGCGAGAAAGAGAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: ENTTAQTSLHLF*KRASERERERE
Trigger: CTCTCTCTCTCTTTCTCGCTCGCTCGCTCGCTTGCAAAATAAATGTAGTGAGGTTTGAGCAGTAGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp TTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTaGTTGGTTCTTTACTCTTCCATTTCTGTGTCACAT +
Preference number: 3 (lower is better)
Translates to: LLFLCSSHTVPF*LVLYSSISVSH
Trigger: ATGTGACACAGAAATGGAAGAGTAAAGAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CCA 72 bp TCTTCCAACAAACAATCACATAAAAACCAGGTGTGGTaGTGGTGGCCTGTGCCTGTAATTTCAGCATTATGG +
Preference number: 3 (lower is better)
Translates to: SSNKQSHKNQVW*WWPVPVISALW
Trigger: CCATAATGCTGAAATTACAGGCACAGGCCACCACCACCACACCTGGTTTTTATGTGATTGTTTGTTGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp CCTTTCCTATCGGTTGCTTTGTCTTCTTGTCTCTTTCACAAGTCTCTATGCATTTCTCATCTCACTACCTaGTTCTGTACGCAGAGTTGG +
Preference number: 3 (lower is better)
Translates to: PFLSVALSSCLFHKSLCISHLTT*FCTQSW
Trigger: CCAACTCTGCGTACAGAACAAGGTAGTGAGATGAGA...AATGCATAGAGACTTGTGAAAGAGACAAGAAGACAAAGCAACCGATAGGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 72 bp GGTTTCAGACTTTATGGAGACTGGCAAAGAGATCAGTaGATTTGTAGCACTTACTTTCCCTACGGTCTAAGC +
Preference number: 3 (lower is better)
Translates to: GFRLYGDWQRDQ*ICSTYFPYGLS
Trigger: GCTTAGACCGTAGGGAAAGTAAGTGCTACAAATTCACTGATCTCTTTGCCAGTCTCCATAAAGTCTGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp TCTGATTCTCATTCTTCCATGACACTCAGTTCCTCTTaGATACTCCCAAAGATGGCAAGGTCTAACCATACA +
Preference number: 3 (lower is better)
Translates to: SDSHSSMTLSSS*ILPKMARSNHT
Trigger: TGTATGGTTAGACCTTGCCATCTTTGGGAGTATGCAAGAGGAACTGAGTGTCATGGAAGAATGAGAATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp TCCTCCCTAGTGTTAAATGACAGTCATGAGTCACCATaGCAGGCTCTGCTCTTTGTACCAAAAGTCTTTATT +
Preference number: 3 (lower is better)
Translates to: SSLVLNDSHESP*QALLFVPKVFI
Trigger: AATAAAGACTTTTGGTACAAAGAGCAGAGCCTGGCATGGTGACTCATGACTGTCATTTAACACTAGGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp CAAAACTATTACTGTGGTTCTAGCCTTCAAGGTCACTaGTCCAAGAAGAAGAATCAGGTGGTTGTTGGTAAC +
Preference number: 3 (lower is better)
Translates to: QNYYCGSSLQGH*SKKKNQVVVGN
Trigger: GTTACCAACAACCACCTGATTCTTCTTCTTGGAGCAGTGACCTTGAAGGCTAGAACCACAGTAATAGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTAAAACCAGGCTGGCCTaGAACTCAGATTTGTCTGCC +
Preference number: 3 (lower is better)
Translates to: SQTSLISNPQRPHIIKQIKTRLA*NSDLSA
Trigger: GGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTT...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTAAGTGCTACATCATTTaGTTAAGACCACAAAGGAAC +
Preference number: 3 (lower is better)
Translates to: ACNFSIMGQGEQIQIPDTKCYII*LRPQRN
Trigger: GTTCCTTTGTGGTCTTAACAAAATGATGTAGCACTT...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTCTGTCCTGCATAGCCTaGTGCTTCTCTGCATTGTCA +
Preference number: 3 (lower is better)
Translates to: SQTSLISNPQRPHIIKQILSCIA*CFSALS
Trigger: TGACAATGCAGAGAAGCACAAGGCTATGCAGGACAG...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp GTAAGGACTAATAGGAGAGCTTTTCCAGCCATGAACTaGAACCTTAATAACAGGGTCTTCCAACAAACAATC +
Preference number: 3 (lower is better)
Translates to: VRTNRRAFPAMN*NLNNRVFQQTI
Trigger: GATTGTTTGTTGGAAGACCCTGTTATTAAGGTTGCAGTTCATGGCTGGAAAAGCTCTCCTATTAGTCCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCACTTTCTTCCCTCTCTaGGCTACTTTCTACTTTCAT +
Preference number: 3 (lower is better)
Translates to: DTDTHSEHEHIVIMRNKGTFFPL*ATFYFH
Trigger: ATGAAAGTAGAAAGTAGCCAAGAGAGGGAAGAAAGT...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTTTGTGCTTCTCTGCATaGTCAGCTCTAGTTCTTGGC +
Preference number: 3 (lower is better)
Translates to: SQTSLISNPQRPHIIKQILCFSA*SALVLG
Trigger: GCCAAGAACTAGAGCTGACAATGCAGAGAAGCACAA...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR-3UTR CAA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTAGTGCACATATGAAATaGGGGAGTCAGTCATCACCC +
Preference number: 3 (lower is better)
Translates to: SQTSLISNPQRPHIIKQISAHMK*GSQSSP
Trigger: GGGTGATGACTGACTCCCCAATTTCATATGTGCACT...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 72 bp GAACTAGGAGGAGAAATCATAACTTTGTCCATGTCATaGTGCAGTAGTTGCATTATTCCCTGCATAATGTCC +
Preference number: 3 (lower is better)
Translates to: ELGGEIITLSMS*CSSCIIPCIMS
Trigger: GGACATTATGCAGGGAATAATGCAACTACTGCATCATGACATGGACAAAGTTATGATTTCTCCTCCTAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 72 bp AATGTGAGAGGGAGTACATATACCATAGTGCACATATaGAATTGGGGAGTCAGTCATCACCCTTCTATTTTG +
Preference number: 3 (lower is better)
Translates to: NVRGSTYTIVHI*NWGVSHHPSIL
Trigger: CAAAATAGAAGGGTGATGACTGACTCCCCAATTTCATATGTGCACTATGGTATATGTACTCCCTCTCACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR TCA 72 bp CTGTCAAGAGCATTAAACCAAACACACCAAATGTTGTaGCTCCAACTTCATAAAACAAACGCCAAATGGAAA +
Preference number: 3 (lower is better)
Translates to: LSRALNQTHQML*LQLHKTNAKWK
Trigger: TTTCCATTTGGCGTTTGTTTTATGAAGTTGGAGTCACAACATTTGGTGTGTTTGGTTTAATGCTCTTGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR GCA 72 bp CTACTTTCATGTGATTGGGGAGAGAGAAAGAATGGATaGCAGCTACATATGATATTTATACTTATGACCATG +
Preference number: 3 (lower is better)
Translates to: LLSCDWGERKNG*QLHMIFILMTM
Trigger: CATGGTCATAAGTATAAATATCATATGTAGCTGGCATCCATTCTTTCTCTCTCCCCAATCACATGAAAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR CCA 90 bp TCCACTGCTCCCCCAGGTTCTGTCAAGCTGCTCAAAAGGATAAAGGGAGAGGAACCCGGGTGTGCCCATTaGTCAGGCATGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: STAPPGSVKLLKRIKGEEPGCAH*SGMLLP
Trigger: GGGCAGCAGCATGCCTGACCAATGGGCACACCCGGG...TTCCTCTCCCTTTATCCTTTTGAGCAGCTTGACAGAACCTGGGGGAGCAGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR TCA 90 bp CGTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAATGTCCTCTGTCATCTGAGTCTGCCGAAGCGTaGGGCCACACTGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RHHWSLVLPHRYECPLSSESAEA*GHTGKP
Trigger: TGGCTTCCCAGTGTGGCCTCACGCTTCGGCAGACTC...AGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
CDS-3UTR CCA 90 bp GGACATTTCAACATAACCACACTGAAGGAGTCCCTGACCACCAAGCCAGCACTGAGCGTGAGGCCACACTaGGAAGCCAGCAGGACCATC +
Preference number: 4 (lower is better)
Translates to: GHFNITTLKESLTTKPALSVRPH*EASRTI
Trigger: GATGGTCCTGCTGGCTTCCCAGTGTGGCCTCACGCT...CAGTGCTGGCTTGGTGGTCAGGGACTCCTTCAGTGTGGTTATGTTGAAATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR CCA 90 bp CTTAGGTCTCCACTGTCTCAAGGGAATATAAAGACCCCAGGGTGGGCTGCAGGTCCCACGGCCACAAAATaGTGCACCACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LRSPLSQGNIKTPGWAAGPTATK*CTTCSL
Trigger: CAAGGAGCAGGTGGTGCACCATTTTGTGGCCGTGGG...ACCTGCAGCCCACCCTGGGGTCTTTATATTCCCTTGAGACAGTGGAGACCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR TCA 90 bp TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATGAGTCTGCCGAAGCGTaGGGCCACACTGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: CLGPSSIDHTGLKLTEIHESAEA*GHTGKP
Trigger: TGGCTTCCCAGTGTGGCCTCACGCTTCGGCAGACTC...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR CCA 90 bp GTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAATGTCCTCTGTCATCTGAGCGTGAGGCCACACTaGGAAGCCAGCAGGACCATC +
Preference number: 4 (lower is better)
Translates to: VITGVWFFHIATNVLCHLSVRPH*EASRTI
Trigger: GATGGTCCTGCTGGCTTCCCAGTGTGGCCTCACGCT...CAGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
CDS-3UTR TCA 90 bp GCTCGTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAATGTCCTCTGTCACCAGCTCTGCCCATGTaGCATTGGGTGGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: ARHHWSLVLPHRYECPLSPALPM*HWVVTS
Trigger: ACTGGTTACCACCCAATGTCACATGGGCAGAGCTGG...TGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
3UTR CAA 72 bp CAAGGACACCCACAGGTTTCTGCTCTACCCTCTGGCTaGGACAGCAGCAGAGAGGCTTCATCTAAGCTTAAG +
Preference number: 4 (lower is better)
Translates to: QGHPQVSALPSG*DSSREASSKLK
Trigger: CTTAAGCTTAGATGAAGCCTCTCTGCTGCTGTCCAAGCCAGAGGGTAGAGCAGAAACCTGTGGGTGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 72 bp ACCTGTCCTGGACTTGCTTGGAAAACCAGGCTGGCCTaGAACTCAGATTTGTCTGCCTTTGCCTCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: TCPGLAWKTRLA*NSDLSAFASQV
Trigger: CACTTGGGAGGCAAAGGCAGACAAATCTGAGTTCAAGGCCAGCCTGGTTTTCCAAGCAAGTCCAGGACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR GCA 90 bp TTCAGAAACTGGCTCGTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAATACGGTCCTCCAGCTCTaGCCATGTGACATTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FRNWLVITGVWFFHIATNTVLQL*PCDIGW
Trigger: CCACCCAATGTCACATGGGCAGAGCTGGAGGACCGT...ATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
CDS-3UTR TCA 90 bp TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCCCAGCTCTGCCCATGTaGCATTGGGTGGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: FTHYSSCAPPILSLSGWFPALPM*HWVVTS
Trigger: ACTGGTTACCACCCAATGTCACATGGGCAGAGCTGG...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR GCA 90 bp GTCCTCTGTCATCTGACCCTTATGCAGGAAACTGTAGAGCATGCGCAGGATGAGAACCAGTATGTCTCCTaGCACAGCCACTCACTCAAG +
Preference number: 4 (lower is better)
Translates to: VLCHLTLMQETVEHAQDENQYVS*HSHSLK
Trigger: CTTGAGTGAGTGGCTGTGGCAGGAGACATACTGGTT...CTCATCCTGCGCATGCTCTACAGTTTCCTGCATAAGGGTCAGATGACAGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
3UTR CAA 72 bp AAGGAACTTCCATGGAGAACAGTGGAAGGCCACCACTaGACTATTCCATGGAGAACAGTGGAAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: KELPWRTVEGHH*TIPWRTVEGHH
Trigger: GTGGTGGCCTTCCACTGTTCTCCATGGAATAGTCAAGTGGTGGCCTTCCACTGTTCTCCATGGAAGTTCCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 72 bp GAAGATCCCATGGGGATAGGTCTGTCCTGCATAGCCTaGTGCTTCTCTGCATTGTCAGCTCTAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: EDPMGIGLSCIA*CFSALSALVLG
Trigger: GCCAAGAACTAGAGCTGACAATGCAGAGAAGCACAAGGCTATGCAGGACAGACCTATCCCCATGGGATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR TCA 90 bp TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATCAATGCGGAGCAAGTTaGCGCTGTAGGAGAAGCCTA +
Preference number: 4 (lower is better)
Translates to: CLGPSSIDHTGLKLTEIHQCGAS*RCRRSL
Trigger: TAGGCTTCTCCTACAGCGTCAACTTGCTCCGCATTG...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR GCA 90 bp AGCATGCAGAGTACTGTGATTTCAGACTTGTGGTCACACCTTGTTTCCATCTCTACGGTCCTCCAGCTCTaGCCATGTGACATTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SMQSTVISDLWSHLVSISTVLQL*PCDIGW
Trigger: CCACCCAATGTCACATGGGCAGAGCTGGAGGACCGT...AGAGATGGAAACAAGGTGTGACCACAAGTCTGAAATCACAGTACTCTGCATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR TCA 90 bp TGTCTTGGACCTAGCTCTATAGACCACACTGGCCTCAAACTCACAGAGATCCATACACAGACGTGTAGATaGCCTGGGTGGGGAAGAATA +
Preference number: 4 (lower is better)
Translates to: CLGPSSIDHTGLKLTEIHTQTCR*PGWGRI
Trigger: TATTCTTCCCCACCCAGGTCATCTACACGTCTGTGT...ATGGATCTCTGTGAGTTTGAGGCCAGTGTGGTCTATAGAGCTAGGTCCAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR CCA 90 bp TCCACTGCTCCCCCAGGTTCTGTCAAGCTGCTCAAAAGGATAAAGGGAGAGGAATATCTTTCTCCTGATTaGATCCTGCACACCCATCCA +
Preference number: 4 (lower is better)
Translates to: STAPPGSVKLLKRIKGEEYLSPD*ILHTHP
Trigger: TGGATGGGTGTGCAGGATCCAATCAGGAGAAAGATA...TTCCTCTCCCTTTATCCTTTTGAGCAGCTTGACAGAACCTGGGGGAGCAGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR CCA 90 bp GGACATTTCAACATAACCACACTGAAGGAGTCCCTGACCACCAAGCCAGCACTGATTCAGGGTCTGATGTaGGTAATTCTCCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: GHFNITTLKESLTTKPALIQGLM*VILPAQ
Trigger: TTGTGCTGGGAGAATTACCCACATCAGACCCTGAAT...CAGTGCTGGCTTGGTGGTCAGGGACTCCTTCAGTGTGGTTATGTTGAAATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 72 bp AGTACCTGTTCCTTGACACACATGCACACACCCCCATaGTTTGTTTTGAAACTGGGCCCTGCTTTGTATCCC +
Preference number: 4 (lower is better)
Translates to: STCSLTHMHTPP*FVLKLGPALYP
Trigger: GGGATACAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGGGTGTGTGCATGTGTGTCAAGGAACAGGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR CCA 90 bp TTCAGAAACTGGCTCGTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAATTATCTTTCTCCTGATTaGATCCTGCACACCCATCCA +
Preference number: 4 (lower is better)
Translates to: FRNWLVITGVWFFHIATNYLSPD*ILHTHP
Trigger: TGGATGGGTGTGCAGGATCCAATCAGGAGAAAGATA...ATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
3UTR CAA 72 bp TCTATCTCATCTCACTACCTTGTTCTGTACGCAGAGTaGGCCCTCATTCTTGCCCCAGCATTTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SISSHYLVLYAE*ALILAPAFFLP
Trigger: AGGAAGGAAAAATGCTGGGGCAAGAATGAGGGCCAACTCTGCGTACAGAACAAGGTAGTGAGATGAGATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 72 bp TCCTGCCTCAGCATGCAGAGTACTGTGATTTCAGACTaGTGGTCACACCTTGTTTCCATCTCTCAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SCLSMQSTVISD*WSHLVSISQVL
Trigger: GAGAACTTGAGAGATGGAAACAAGGTGTGACCACAAGTCTGAAATCACAGTACTCTGCATGCTGAGGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 72 bp CTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTaGGTTCTTTACTCTTCCATTTCTGTGTCACATGGA +
Preference number: 4 (lower is better)
Translates to: LFLCSSHTVPFW*VLYSSISVSHG
Trigger: TCCATGTGACACAGAAATGGAAGAGTAAAGAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 72 bp AAGGTCACTGCTCCAAGAAGAAGAATCAGGTGGTTGTaGGTAACACGGGCACCTAACTTCATAGTTCCCATC +
Preference number: 4 (lower is better)
Translates to: KVTAPRRRIRWL*VTRAPNFIVPI
Trigger: GATGGGAACTATGAAGTTAGGTGCCCGTGTTACCAACAACCACCTGATTCTTCTTCTTGGAGCAGTGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR TCA 90 bp GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCCAAAGTGATCAGCAGTaGAAGGTAGAAGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: DTDTHSEHEHIVIMRNKGQSDQQ*KVEAQL
Trigger: GAGCTGGGCTTCTACCTTTCACTGCTGATCACTTTG...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR GCA 90 bp GACACAGATACACATTCTGAACATGAACATATTGTCATCATGCGCAACAAGGGCGTCTCCTCTGGACACTaGTTCATCCTGAGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: DTDTHSEHEHIVIMRNKGVSSGH*FILRKY
Trigger: GTACTTCCTCAGGATGAAGCAGTGTCCAGAGGAGAC...GCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR CCA 90 bp TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCCTTCACAGAATTTCTTaGATAAGGAAGGCCGATCCT +
Preference number: 4 (lower is better)
Translates to: FTHYSSCAPPILSLSGWFLHRIS*IRKADP
Trigger: AGGATCGGCCTTCCTTATCCAAGAAATTCTGTGAAG...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR CCA 90 bp CAAGAGCACAATAAAGAAGTAGTAGCCAAAGAAGGGGCCCGAGTTCTTGATGGAATTCAGGGTCTGATGTaGGTAATTCTCCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: QEHNKEVVAKEGARVLDGIQGLM*VILPAQ
Trigger: TTGTGCTGGGAGAATTACCCACATCAGACCCTGAAT...TCCATCAAGAACTCGGGCCCCTTCTTTGGCTACTACTTCTTTATTGTGCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
CDS-3UTR TCA 90 bp TGCAAACTGATTGACTGGATTAAAAACTGCAAAGGAACTTCCATGGAGAACAGTAGAGCATGCGCAGGATaGGGCAGAACCAGTACACAT +
Preference number: 4 (lower is better)
Translates to: CKLIDWIKNCKGTSMENSRACAG*GRTSTH
Trigger: ATGTGTACTGGTTCTGCCTCATCCTGCGCATGCTCT...ACTGTTCTCCATGGAAGTTCCTTTGCAGTTTTTAATCCAGTCAATCAGTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 72 bp ACACCCCCATTGTTTGTTTTGAAACTGGGCCCTGCTTaGTATCCCAGGCTTATATGTTCTTCCTGTCTATTG +
Preference number: 4 (lower is better)
Translates to: TPPLFVLKLGPA*YPRLICSSCLL
Trigger: CAATAGACAGGAAGAACATATAAGCCTGGGATACAAAGCAGGGCCCAGTTTCAAAACAAACAATGGGGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 72 bp AGATTGACACAGATACACATTCTGAACATGAACATATaGTCATCATGCGCAACAAGGGCTCAGTCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RLTQIHILNMNI*SSCATRAQSLP
Trigger: AGGCAGGGACTGAGCCCTTGTTGCGCATGATGACAATATGTTCATGTTCAGAATGTGTATCTGTGTCAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
3UTR CAA 72 bp TGTGTGGAATCTGGCTGGCAAACTCTCCTCCCTAGATaGACACAGATACACATTCTGAACATGAACATATTG +
Preference number: 4 (lower is better)
Translates to: CVESGWQTLLPR*TQIHILNMNIL
Trigger: CAATATGTTCATGTTCAGAATGTGTATCTGTGTCAATCTAGGGAGGAGAGTTTGCCAGCCAGATTCCACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR GCA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTAACCAGTATGTCTCCTaGCACAGCCACTCACTCAAG +
Preference number: 4 (lower is better)
Translates to: SQTSLISNPQRPHIIKQINQYVS*HSHSLK
Trigger: CTTGAGTGAGTGGCTGTGGCAGGAGACATACTGGTT...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS TCA 90 bp ACAGCCACCAGGACCAGAGCCACTGGGAAGGCAGCAAGCACGTGGTaGGGGTGGGCGAACACCAGGCCATCACGGTCCTCCAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: TATRTRATGKAASTW*GWANTRPSRSSSSA
Trigger: GGCAGAGCTGGAGGACCGTGATGGCCTGGTGTTCGCCCACCCTCACCACGTGCTTGCTGCCTTCCCAGTGGCTCTGGTCCTGGTGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000008350.16
ENSMUST00000176042.2
ENSMUST00000176130.10
CDS TCA 90 bp GATAAGGAAGGCCGATCCTGGTTCCGACGTCTCCTGAACCAGCGTTaGGTCTGCCGAAGCGTGAGGCCACACTGGGAAGCCAGCAGGACC +
Preference number: 5 (lower is better)
Translates to: DKEGRSWFRRLLNQR*VCRSVRPHWEASRT
Trigger: GGTCCTGCTGGCTTCCCAGTGTGGCCTCACGCTTCGGCAGACTCAACGCTGGTTCAGGAGACGTCGGAACCAGGATCGGCCTTCCTTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10
CDS TCA 90 bp GGTGGGCGAACACCAGGCCATCACGGTCCTCCAGCTCTGCCCATGTaGCATTGGGTGGTAACCAGTATGTCTCCTGCCACAGCCACTCAC +
Preference number: 5 (lower is better)
Translates to: GGRTPGHHGPPALPM*HWVVTSMSPATATH
Trigger: GTGAGTGGCTGTGGCAGGAGACATACTGGTTACCACCCAATGTCACATGGGCAGAGCTGGAGGACCGTGATGGCCTGGTGTTCGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000008350.16
ENSMUST00000176042.2
ENSMUST00000176130.10
CDS-3UTR CAA 90 bp TCCCATCTGCACCTTGATCCAGATTATCCTGTGTGGAATCTGGCTGGCAAACTCGCCCGGGTGTGCCCATaGGTCAGGCATGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SHLHLDPDYPVWNLAGKLARVCP*VRHAAA
Trigger: GGCAGCAGCATGCCTGACCAATGGGCACACCCGGGC...GAGTTTGCCAGCCAGATTCCACACAGGATAATCTGGATCAAGGTGCAGATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS GCA 90 bp CCACACTGGGAAGCCAGCAGGACCATCTGTGTCTCCTCTGGACACTaGTTCATCCTGAGGAAGTACTTCTCCAGCACCGGGTTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: PHWEASRTICVSSGH*FILRKYFSSTGLGF
Trigger: AAAGCCCAACCCGGTGCTGGAGAAGTACTTCCTCAGGATGAAGCAGTGTCCAGAGGAGACACAGATGGTCCTGCTGGCTTCCCAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10
CDS GCA 90 bp TTCTCCAGCACCGGGTTGGGCTTTATCTTTCTCCTGATTGGATCCTaGACACCCATCCACCGGCTCAGGGGCAAGGCCACAAATCTCTCA +
Preference number: 5 (lower is better)
Translates to: FSSTGLGFIFLLIGS*TPIHRLRGKATNLS
Trigger: TGAGAGATTTGTGGCCTTGCCCCTGAGCCGGTGGATGGGTGTGCAGGATCCAATCAGGAGAAAGATAAAGCCCAACCCGGTGCTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10
CDS TCA 90 bp AGCAGTCATGCAACAACAGTACCACAGCGCCAATGCGGAGCAAGTTaGCGCTGTAGGAGAAGCCTATCAGTCCCACGGCCACAAAATGGT +
Preference number: 5 (lower is better)
Translates to: SSHATTVPQRQCGAS*RCRRSLSVPRPQNG
Trigger: ACCATTTTGTGGCCGTGGGACTGATAGGCTTCTCCTACAGCGTCAACTTGCTCCGCATTGGCGCTGTGGTACTGTTGTTGCATGACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR CAA 90 bp GGTTGGTGCTCCTTCCCAGGCTGGCCTCAAACCTACAATCTTCCTGCCTCAGCAGCTTCACAGAATTTCTaGGATAAGGAAGGCCGATCC +
Preference number: 5 (lower is better)
Translates to: GWCSFPGWPQTYNLPASAASQNF*DKEGRS
Trigger: GGATCGGCCTTCCTTATCCAAGAAATTCTGTGAAGC...TGCTGAGGCAGGAAGATTGTAGGTTTGAGGCCAGCCTGGGAAGGAGCACCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR CAA 90 bp TTCACTCATTACTCTTCCTGTGCTCCTCCCATACTGTCCCTTTCTGGTTGGTTCCGGCTCCGCGGGCCATaGGTAACAGCTACTCTAGAC +
Preference number: 5 (lower is better)
Translates to: FTHYSSCAPPILSLSGWFRLRGP*VTATLD
Trigger: GTCTAGAGTAGCTGTTACCAATGGCCCGCGGAGCCG...GAACCAACCAGAAAGGGACAGTATGGGAGGAGCACAGGAAGAGTAATGAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS CCA 90 bp CCCAGCACAATGATGGCGACCACAACCATGATTCATGGTAGAGGATaGAGGTGCCACCCACGAAGGAACACAGATAGAAGACAAACCTCC +
Preference number: 5 (lower is better)
Translates to: PSTMMATTTMIHGRG*RCHPRRNTDRRQTS
Trigger: GGAGGTTTGTCTTCTATCTGTGTTCCTTCGTGGGTGGCACCTCCATCCTCTACCATGAATCATGGTTGTGGTCGCCATCATTGTGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10
CDS CCA 90 bp AGACCCTCGAGCCATCCCATTCTTCAGCTGTGGACCTTCAGAAACTaGCTCGTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAAT +
Preference number: 5 (lower is better)
Translates to: RPSSHPILQLWTFRN*LVITGVWFFHIATN
Trigger: ATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACGAGCCAGTTTCTGAAGGTCCACAGCTGAAGAATGGGATGGCTCGAGGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS TCA 90 bp CTTGAAGTCCTTGCGTTTGACATCAAAGGGCAAAGTGATCAGCAGTaGAAGGTAGAAGCCCAGCTCCAGGAGGTACCACCAGTACAGGGA +
Preference number: 5 (lower is better)
Translates to: LEVLAFDIKGQSDQQ*KVEAQLQEVPPVQG
Trigger: TCCCTGTACTGGTGGTACCTCCTGGAGCTGGGCTTCTACCTTTCACTGCTGATCACTTTGCCCTTTGATGTCAAACGCAAGGACTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS GCA 90 bp ACAATGATGGCGACCACAACCATGATTCATGGTAGAGGATGGAGGTaGCACCCACGAAGGAACACAGATAGAAGACAAACCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TMMATTTMIHGRGWR*HPRRNTDRRQTSSR
Trigger: CCTGCTGGAGGTTTGTCTTCTATCTGTGTTCCTTCGTGGGTGGCACCTCCATCCTCTACCATGAATCATGGTTGTGGTCGCCATCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10
CDS-3UTR CAA 90 bp CTGGTTCTTCCACATCGCTACGAATGTCCTCTGTCATCTGACCCTTATGCAGGATCTGCCCATGTGACATaGGGTGGTAACCAGTATGTC +
Preference number: 5 (lower is better)
Translates to: LVLPHRYECPLSSDPYAGSAHVT*GGNQYV
Trigger: GACATACTGGTTACCACCCAATGTCACATGGGCAGA...TCCTGCATAAGGGTCAGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
CDS-3UTR CAA 90 bp CGTCATCACTGGAGTCTGGTTCTTCCACATCGCTACGAATGTCCTCTGTCATCTGCTTCACAGAATTTCTaGGATAAGGAAGGCCGATCC +
Preference number: 5 (lower is better)
Translates to: RHHWSLVLPHRYECPLSSASQNF*DKEGRS
Trigger: GGATCGGCCTTCCTTATCCAAGAAATTCTGTGAAGC...AGATGACAGAGGACATTCGTAGCGATGTGGAAGAACCAGACTCCAGTGATGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176130.10
CDS-3UTR CAA 90 bp GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTAAGGGGCCCGAGTTCTaGATGGAGTCATACACAGAC +
Preference number: 5 (lower is better)
Translates to: ACNFSIMGQGEQIQIPDTKGPEF*MESYTD
Trigger: GTCTGTGTATGACTCCATCAAGAACTCGGGCCCCTT...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR CAA 90 bp GCCTGTAATTTCAGCATTATGGGGCAGGGGGAACAAATACAAATCCCTGACACTTCTGCCCATGTGACATaGGGTGGTAACCAGTATGTC +
Preference number: 5 (lower is better)
Translates to: ACNFSIMGQGEQIQIPDTSAHVT*GGNQYV
Trigger: GACATACTGGTTACCACCCAATGTCACATGGGCAGA...AGTGTCAGGGATTTGTATTTGTTCCCCCTGCCCCATAATGCTGAAATTACAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS-3UTR CAA 90 bp AGTCAGACTAGCCTAATCAGCAATCCCCAGAGACCACATATTATAAAACAAATTTTGAAGTCCTTGCGTTaGACATCAAAGGGCAAAGTG +
Preference number: 5 (lower is better)
Translates to: SQTSLISNPQRPHIIKQILKSLR*TSKGKV
Trigger: CACTTTGCCCTTTGATGTCAAACGCAAGGACTTCAA...AATTTGTTTTATAATATGTGGTCTCTGGGGATTGCTGATTAGGCTAGTCTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS TCA 72 bp AGGACCAGAGCCACTGGGAAGGCAGCAAGCACGTGGTaGGGGTGGGCGAACACCAGGCCATCACGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: RTRATGKAASTW*GWANTRPSRSS
Trigger: GGAGGACCGTGATGGCCTGGTGTTCGCCCACCCTCACCACGTGCTTGCTGCCTTCCCAGTGGCTCTGGTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000008350.16
ENSMUST00000176042.2
ENSMUST00000176130.10
CDS TCA 72 bp GGCCGATCCTGGTTCCGACGTCTCCTGAACCAGCGTTaGGTCTGCCGAAGCGTGAGGCCACACTGGGAAGCC +
Preference number: 6 (lower is better)
Translates to: GRSWFRRLLNQR*VCRSVRPHWEA
Trigger: GGCTTCCCAGTGTGGCCTCACGCTTCGGCAGACTCAACGCTGGTTCAGGAGACGTCGGAACCAGGATCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10
CDS CAA 72 bp AGGCCGATCCTGGTTCCGACGTCTCCTGAACCAGCGTaGAGTCTGCCGAAGCGTGAGGCCACACTGGGAAGC +
Preference number: 6 (lower is better)
Translates to: RPILVPTSPEPA*SLPKREATLGS
Trigger: GCTTCCCAGTGTGGCCTCACGCTTCGGCAGACTCAACGCTGGTTCAGGAGACGTCGGAACCAGGATCGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10
CDS CAA 72 bp TTGGTCAGGCATGCTGCTGCCCGGCTCCGCGGGCCATaGGTAACAGCTACTCTAGACCCTCGAGCCATCCCA +
Preference number: 6 (lower is better)
Translates to: LVRHAAARLRGP*VTATLDPRAIP
Trigger: TGGGATGGCTCGAGGGTCTAGAGTAGCTGTTACCAATGGCCCGCGGAGCCGGGCAGCAGCATGCCTGACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS CAA 90 bp GTGTGCCCATTGGTCAGGCATGCTGCTGCCCGGCTCCGCGGGCCATaGGTAACAGCTACTCTAGACCCTCGAGCCATCCCATTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: VCPLVRHAAARLRGP*VTATLDPRAIPFFS
Trigger: GCTGAAGAATGGGATGGCTCGAGGGTCTAGAGTAGCTGTTACCAATGGCCCGCGGAGCCGGGCAGCAGCATGCCTGACCAATGGGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS CAA 90 bp GCGAACACCAGGCCATCACGGTCCTCCAGCTCTGCCCATGTGACATaGGGTGGTAACCAGTATGTCTCCTGCCACAGCCACTCACTCAAG +
Preference number: 6 (lower is better)
Translates to: ANTRPSRSSSSAHVT*GGNQYVSCHSHSLK
Trigger: CTTGAGTGAGTGGCTGTGGCAGGAGACATACTGGTTACCACCCAATGTCACATGGGCAGAGCTGGAGGACCGTGATGGCCTGGTGTTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000008350.16
ENSMUST00000176042.2
ENSMUST00000176130.10
CDS TCA 72 bp ACTTCTCCAGCACCGGGTTGGGCTTTATCTTTCTCCTaGTTGGATCCTGCACACCCATCCACCGGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: TSPAPGWALSFS*LDPAHPSTGSG
Trigger: CCCTGAGCCGGTGGATGGGTGTGCAGGATCCAATCAGGAGAAAGATAAAGCCCAACCCGGTGCTGGAGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10
CDS GCA 72 bp GAAGCCAGCAGGACCATCTGTGTCTCCTCTGGACACTaGTTCATCCTGAGGAAGTACTTCTCCAGCACCGGG +
Preference number: 6 (lower is better)
Translates to: EASRTICVSSGH*FILRKYFSSTG
Trigger: CCCGGTGCTGGAGAAGTACTTCCTCAGGATGAAGCAGTGTCCAGAGGAGACACAGATGGTCCTGCTGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10
CDS GCA 72 bp CCTATCAGTCCCACGGCCACAAAATGGTGCACCACCTaGTCCTTGAAGTCCTTGCGTTTGACATCAAAGGGC +
Preference number: 6 (lower is better)
Translates to: PISPTATKWCTT*SLKSLRLTSKG
Trigger: GCCCTTTGATGTCAAACGCAAGGACTTCAAGGAGCAGGTGGTGCACCATTTTGTGGCCGTGGGACTGATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS CCA 72 bp TACTCTAGACCCTCGAGCCATCCCATTCTTCAGCTGTaGACCTTCAGAAACTGGCTCGTCATCACTGGAGTC +
Preference number: 6 (lower is better)
Translates to: YSRPSSHPILQL*TFRNWLVITGV
Trigger: GACTCCAGTGATGACGAGCCAGTTTCTGAAGGTCCACAGCTGAAGAATGGGATGGCTCGAGGGTCTAGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS CAA 72 bp AGTCCCACGGCCACAAAATGGTGCACCACCTGCTCCTaGAAGTCCTTGCGTTTGACATCAAAGGGCAAAGTG +
Preference number: 6 (lower is better)
Translates to: SPTATKWCTTCS*KSLRLTSKGKV
Trigger: CACTTTGCCCTTTGATGTCAAACGCAAGGACTTCAAGGAGCAGGTGGTGCACCATTTTGTGGCCGTGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008350.16
CDS TCA 72 bp CTTGCGTTTGACATCAAAGGGCAAAGTGATCAGCAGTaGAAGGTAGAAGCCCAGCTCCAGGAGGTACCACCA +
Preference number: 6 (lower is better)
Translates to: LAFDIKGQSDQQ*KVEAQLQEVPP
Trigger: TGGTGGTACCTCCTGGAGCTGGGCTTCTACCTTTCACTGCTGATCACTTTGCCCTTTGATGTCAAACGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10
CDS GCA 72 bp GCGACCACAACCATGATTCATGGTAGAGGATGGAGGTaGCACCCACGAAGGAACACAGATAGAAGACAAACC +
Preference number: 6 (lower is better)
Translates to: ATTTMIHGRGWR*HPRRNTDRRQT
Trigger: GGTTTGTCTTCTATCTGTGTTCCTTCGTGGGTGGCACCTCCATCCTCTACCATGAATCATGGTTGTGGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10
CDS CCA 72 bp AGAAGACAAACCTCCAGCAGGCTTCACAGAATTTCTTaGATAAGGAAGGCCGATCCTGGTTCCGACGTCTCC +
Preference number: 6 (lower is better)
Translates to: RRQTSSRLHRIS*IRKADPGSDVS
Trigger: GGAGACGTCGGAACCAGGATCGGCCTTCCTTATCCAAGAAATTCTGTGAAGCCTGCTGGAGGTTTGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10
CDS CCA 72 bp ATGATGGCGACCACAACCATGATTCATGGTAGAGGATaGAGGTGCCACCCACGAAGGAACACAGATAGAAGA +
Preference number: 6 (lower is better)
Translates to: MMATTTMIHGRG*RCHPRRNTDRR
Trigger: TCTTCTATCTGTGTTCCTTCGTGGGTGGCACCTCCATCCTCTACCATGAATCATGGTTGTGGTCGCCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000008350.16
ENSMUST00000176130.10