Pregenerated sensors for CERS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030510Ensembl transcript IDs: ENSMUST00000066475.11, ENSMUST00000208521.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCTTCAGAGGCCCTGTGCAGAGAAGCACCTCGGCTGCCCAGGGTaGCTCAGGAGCCCTGGCAGCCTGCCCTCTCCTTTGGCTCTAACT | + |
|
Preference number: 1 (lower is better) Translates to: CLQRPCAEKHLGCPG*LRSPGSLPSPLALT Trigger: AGTTAGAGCCAAAGGAGAGGGCAGGCTGCCAGGGCTCCTGAGCCACCCTGGGCAGCCGAGGTGCTTCTCTGCACAGGGCCTCTGAAGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CCA 90 bp | CTGTGCAGAGAAGCACCTCGGCTGCCCAGGGTGGCTCAGGAGCCCTaGCAGCCTGCCCTCTCCTTTGGCTCTAACTGCTCTCTTGCCACT | + |
|
Preference number: 1 (lower is better) Translates to: LCREAPRLPRVAQEP*QPALSFGSNCSLAT Trigger: AGTGGCAAGAGAGCAGTTAGAGCCAAAGGAGAGGGCAGGCTGCCAGGGCTCCTGAGCCACCCTGGGCAGCCGAGGTGCTTCTCTGCACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR GCA 90 bp | GTGGCTCAGGAGCCCTGGCAGCCTGCCCTCTCCTTTGGCTCTAACTaGTCTCTTGCCACTGCAAACACACTTTTGGAAGATGAGGTGCTA | + |
|
Preference number: 1 (lower is better) Translates to: VAQEPWQPALSFGSN*SLATANTLLEDEVL Trigger: TAGCACCTCATCTTCCAAAAGTGTGTTTGCAGTGGCAAGAGAGCAGTTAGAGCCAAAGGAGAGGGCAGGCTGCCAGGGCTCCTGAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR TCA 90 bp | ACACGAGCACTCCTGTCAACTCACCCAGTCCTTACTCTAACTCTGTaGGGTAGTAGAGCAGATGCCTTCAGAGGCCCTGTGCAGAGAAGC | + |
|
Preference number: 1 (lower is better) Translates to: TRALLSTHPVLTLTL*GSRADAFRGPVQRS Trigger: GCTTCTCTGCACAGGGCCTCTGAAGGCATCTGCTCTACTACCTCACAGAGTTAGAGTAAGGACTGGGTGAGTTGACAGGAGTGCTCGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR TCA 90 bp | ACAGCATGGCTTCCTCTTTCCGCTTCTAAGAGTTCCTTCAGAATTTaGAGCTCCCAGGCATGCCACCCTGGGGCTGGCTTCCTGGGTAAT | + |
|
Preference number: 1 (lower is better) Translates to: TAWLPLSASKSSFRI*SSQACHPGAGFLGN Trigger: ATTACCCAGGAAGCCAGCCCCAGGGTGGCATGCCTGGGAGCTTCAAATTCTGAAGGAACTCTTAGAAGCGGAAAGAGGAAGCCATGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CCA 90 bp | CCGAAACTCACGTCCCTCTACGCCAGGACCCTGCCAGGAAGGCTCTaGGCTCATCTGAGAATTATCCCTGGAAACAACATAGTCACAAAC | + |
|
Preference number: 1 (lower is better) Translates to: PKLTSLYARTLPGRL*AHLRIIPGNNIVTN Trigger: GTTTGTGACTATGTTGTTTCCAGGGATAATTCTCAGATGAGCCCAGAGCCTTCCTGGCAGGGTCCTGGCGTAGAGGGACGTGAGTTTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CCA 90 bp | TCTCCTTTGGCTCTAACTGCTCTCTTGCCACTGCAAACACACTTTTaGAAGATGAGGTGCTACTGTGGCCAACCACCAGGAGAAAGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: SPLALTALLPLQTHF*KMRCYCGQPPGESG Trigger: CCCACTTTCTCCTGGTGGTTGGCCACAGTAGCACCTCATCTTCCAAAAGTGTGTTTGCAGTGGCAAGAGAGCAGTTAGAGCCAAAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR GCA 90 bp | GCTATAGGAAATGGGGTTACCTTCCCTAGTCACAGCAGCCTCCAATaGTGCCACAAAGTATACCTCTTCCTCTTCTGCAGTGTAAGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: AIGNGVTFPSHSSLQ*CHKVYLFLFCSVSA Trigger: AGCACTTACACTGCAGAAGAGGAAGAGGTATACTTTGTGGCAGCATTGGAGGCTGCTGTGACTAGGGAAGGTAACCCCATTTCCTATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR GCA 90 bp | ATAGGAAATGGGGTTACCTTCCCTAGTCACAGCAGCCTCCAATGCTaGCACAAAGTATACCTCTTCCTCTTCTGCAGTGTAAGTGCTTCA | + |
|
Preference number: 1 (lower is better) Translates to: IGNGVTFPSHSSLQC*HKVYLFLFCSVSAS Trigger: TGAAGCACTTACACTGCAGAAGAGGAAGAGGTATACTTTGTGGCAGCATTGGAGGCTGCTGTGACTAGGGAAGGTAACCCCATTTCCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CCA 90 bp | TCTCTTGCCACTGCAAACACACTTTTGGAAGATGAGGTGCTACTGTaGCCAACCACCAGGAGAAAGTGGGTAACCTGGACATTTGTCAAA | + |
|
Preference number: 1 (lower is better) Translates to: SLATANTLLEDEVLL*PTTRRKWVTWTFVK Trigger: TTTGACAAATGTCCAGGTTACCCACTTTCTCCTGGTGGTTGGCCACAGTAGCACCTCATCTTCCAAAAGTGTGTTTGCAGTGGCAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR-3UTR TCA 90 bp | GCCCTGTGCAGAGAAGCACCTCGGCTGCCCAGGGTGGCTCAGGAGCCCTGGCAGCACAGTCAGGGTGACTaGGTTGGGGGCCACCTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: ALCREAPRLPRVAQEPWQHSQGD*VGGHLE Trigger: CTCAAGGTGGCCCCCAACTCAGTCACCCTGACTGTG...CTGCCAGGGCTCCTGAGCCACCCTGGGCAGCCGAGGTGCTTCTCTGCACAGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CAA 90 bp | AGGAGCCCTGGCAGCCTGCCCTCTCCTTTGGCTCTAACTGCTCTCTaGCCACTGCAAACACACTTTTGGAAGATGAGGTGCTACTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RSPGSLPSPLALTAL*PLQTHFWKMRCYCG Trigger: GCCACAGTAGCACCTCATCTTCCAAAAGTGTGTTTGCAGTGGCAAGAGAGCAGTTAGAGCCAAAGGAGAGGGCAGGCTGCCAGGGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR-3UTR CCA 90 bp | CTGCGCAGTGGTCAGAATGTGTTAGATCCTGAGACCACAGCATGGCTTCCTCTTGACCGTCTCAGCCCATaGCATCTCTGTGAGCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LRSGQNVLDPETTAWLPLDRLSP*HLCEPE Trigger: CTCAGGCTCACAGAGATGCCATGGGCTGAGACGGTC...AAGAGGAAGCCATGCTGTGGTCTCAGGATCTAACACATTCTGACCACTGCGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR-3UTR CCA 90 bp | ATCGGGGCTGACAGCACAGGGCAGCTTGACACCGAAACTCACGTCCCTCTACGCCTGCAAACACACTTTTaGAAGATGAGGTGCTACTGT | + |
|
Preference number: 2 (lower is better) Translates to: IGADSTGQLDTETHVPLRLQTHF*KMRCYC Trigger: ACAGTAGCACCTCATCTTCCAAAAGTGTGTTTGCAG...GCGTAGAGGGACGTGAGTTTCGGTGTCAAGCTGCCCTGTGCTGTCAGCCCCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR-3UTR CCA 90 bp | ATCGGGGCTGACAGCACAGGGCAGCTTGACACCGAAACTCACGTCCCTCTACGCACATTTGTCAAACCATaGAGCATGTACAAGGTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: IGADSTGQLDTETHVPLRTFVKP*SMYKVV Trigger: TACCACCTTGTACATGCTCCATGGTTTGACAAATGT...GCGTAGAGGGACGTGAGTTTCGGTGTCAAGCTGCCCTGTGCTGTCAGCCCCGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR-3UTR TCA 90 bp | CTGCGCAGTGGTCAGAATGTGTTAGATCCTGAGACCACAGCATGGCTTCCTCTTAGTTCCTTCAGAATTTaGAGCTCCCAGGCATGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LRSGQNVLDPETTAWLPLSSFRI*SSQACH Trigger: GTGGCATGCCTGGGAGCTTCAAATTCTGAAGGAACT...AAGAGGAAGCCATGCTGTGGTCTCAGGATCTAACACATTCTGACCACTGCGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR-3UTR CCA 90 bp | ATAGTCACAAACAGAAACAAACTTCTGGGCCTTTGTACCTCCGGGTATCTTACAGTGGCTCAGGAGCCCTaGCAGCCTGCCCTCTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: IVTNRNKLLGLCTSGYLTVAQEP*QPALSF Trigger: AAAGGAGAGGGCAGGCTGCCAGGGCTCCTGAGCCAC...TGTAAGATACCCGGAGGTACAAAGGCCCAGAAGTTTGTTTCTGTTTGTGACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR-3UTR GCA 90 bp | AATGGGGTTACCTTCCCTAGTCACAGCAGCCTCCAATGCTGCCACAAAGTATACTTTTGGAAGATGAGGTaGTACTGTGGCCAACCACCA | + |
|
Preference number: 2 (lower is better) Translates to: NGVTFPSHSSLQCCHKVYFWKMR*YCGQPP Trigger: TGGTGGTTGGCCACAGTAGCACCTCATCTTCCAAAA...GTATACTTTGTGGCAGCATTGGAGGCTGCTGTGACTAGGGAAGGTAACCCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR-3UTR GCA 90 bp | AATGGGGTTACCTTCCCTAGTCACAGCAGCCTCCAATGCTGCCACAAAGTATACCTGCTCTCTTGCCACTaGAAACACACTTTTGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: NGVTFPSHSSLQCCHKVYLLSCH*KHTFGR Trigger: TCTTCCAAAAGTGTGTTTGCAGTGGCAAGAGAGCAG...GTATACTTTGTGGCAGCATTGGAGGCTGCTGTGACTAGGGAAGGTAACCCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR-3UTR GCA 90 bp | TTACCTTCTGCCGTCAAAGCAGAAAAAGAAGTTGGACAGTATAGCAATAAACAACCTTCAGAGGCCCTGTaGAGAGAAGCACCTCGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LPSAVKAEKEVGQYSNKQPSEAL*REAPRL Trigger: CAGCCGAGGTGCTTCTCTGCACAGGGCCTCTGAAGG...TTGTTTATTGCTATACTGTCCAACTTCTTTTTCTGCTTTGACGGCAGAAGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR-3UTR GCA 90 bp | ATAGTCACAAACAGAAACAAACTTCTGGGCCTTTGTACCTCCGGGTATCTTACATCCTTTGGCTCTAACTaGTCTCTTGCCACTGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: IVTNRNKLLGLCTSGYLTSFGSN*SLATAN Trigger: GTTTGCAGTGGCAAGAGAGCAGTTAGAGCCAAAGGA...TGTAAGATACCCGGAGGTACAAAGGCCCAGAAGTTTGTTTCTGTTTGTGACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CAA 90 bp | CCCTGGAAACAACATAGTCACAAACAGAAACAAACTTCTGGGCCTTaGTACCTCCGGGTATCTTACACATTAAGAGCCATTTTTAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: PWKQHSHKQKQTSGP*YLRVSYTLRAIFKM Trigger: CATCTTAAAAATGGCTCTTAATGTGTAAGATACCCGGAGGTACAAAGGCCCAGAAGTTTGTTTCTGTTTGTGACTATGTTGTTTCCAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR-3UTR CCA 90 bp | GAGAATTATCCCTGGAAACAACATAGTCACAAACAGAAACAAACTTCTGGGCCTCTCTTTTGTCAAAGCTaGAATTCTAGTGCAGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: ENYPWKQHSHKQKQTSGPLFCQS*NSSAVR Trigger: CCTCACTGCACTAGAATTCCAGCTTTGACAAAAGAG...AGGCCCAGAAGTTTGTTTCTGTTTGTGACTATGTTGTTTCCAGGGATAATTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR GCA 72 bp | TGCCTTCAGAGGCCCTGTGCAGAGAAGCACCTCGGCTaGCCAGGGTGGCTCAGGAGCCCTGGCAGCCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CLQRPCAEKHLG*PGWLRSPGSLP Trigger: GGGCAGGCTGCCAGGGCTCCTGAGCCACCCTGGGCAGCCGAGGTGCTTCTCTGCACAGGGCCTCTGAAGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CCA 72 bp | GCTCCTCAGTGGCTCCCGAGTGACCGTCTCAGCCCATaGCATCTCTGTGAGCCTGAGGATGGGGATCGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: APQWLPSDRLSP*HLCEPEDGDRG Trigger: GCCCCGATCCCCATCCTCAGGCTCACAGAGATGCCATGGGCTGAGACGGTCACTCGGGAGCCACTGAGGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CCA 72 bp | GAAGCTCCCAGGCATGCCACCCTGGGGCTGGCTTCCTaGGTAATATGGCTCAGTGAGCAACCTCTCCGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: EAPRHATLGLAS*VIWLSEQPLRD Trigger: GTCCCGGAGAGGTTGCTCACTGAGCCATATTACCCAGGAAGCCAGCCCCAGGGTGGCATGCCTGGGAGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR GCA 72 bp | TGTGAGGTAGTAGAGCAGATGCCTTCAGAGGCCCTGTaGAGAGAAGCACCTCGGCTGCCCAGGGTGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: CEVVEQMPSEAL*REAPRLPRVAQ Trigger: CTGAGCCACCCTGGGCAGCCGAGGTGCTTCTCTGCACAGGGCCTCTGAAGGCATCTGCTCTACTACCTCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR GCA 72 bp | GAGCCCTGGCAGCCTGCCCTCTCCTTTGGCTCTAACTaGTCTCTTGCCACTGCAAACACACTTTTGGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: EPWQPALSFGSN*SLATANTLLED Trigger: ATCTTCCAAAAGTGTGTTTGCAGTGGCAAGAGAGCAGTTAGAGCCAAAGGAGAGGGCAGGCTGCCAGGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CCA 72 bp | ACGTCCCTCTACGCCAGGACCCTGCCAGGAAGGCTCTaGGCTCATCTGAGAATTATCCCTGGAAACAACATA | + |
|
Preference number: 3 (lower is better) Translates to: TSLYARTLPGRL*AHLRIIPGNNI Trigger: TATGTTGTTTCCAGGGATAATTCTCAGATGAGCCCAGAGCCTTCCTGGCAGGGTCCTGGCGTAGAGGGACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR TCA 72 bp | CTCCTGTCAACTCACCCAGTCCTTACTCTAACTCTGTaGGGTAGTAGAGCAGATGCCTTCAGAGGCCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLSTHPVLTLTL*GSRADAFRGPV Trigger: CACAGGGCCTCTGAAGGCATCTGCTCTACTACCTCACAGAGTTAGAGTAAGGACTGGGTGAGTTGACAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR TCA 72 bp | CTGCTCTCTTGCCACTGCAAACACACTTTTGGAAGATaGGGTGCTACTGTGGCCAACCACCAGGAGAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLSCHCKHTFGR*GATVANHQEKV Trigger: CACTTTCTCCTGGTGGTTGGCCACAGTAGCACCTCATCTTCCAAAAGTGTGTTTGCAGTGGCAAGAGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR GCA 72 bp | GGGGTTACCTTCCCTAGTCACAGCAGCCTCCAATGCTaGCACAAAGTATACCTCTTCCTCTTCTGCAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GVTFPSHSSLQC*HKVYLFLFCSV Trigger: TACACTGCAGAAGAGGAAGAGGTATACTTTGTGGCAGCATTGGAGGCTGCTGTGACTAGGGAAGGTAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR GCA 72 bp | AATGGGGTTACCTTCCCTAGTCACAGCAGCCTCCAATaGTGCCACAAAGTATACCTCTTCCTCTTCTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: NGVTFPSHSSLQ*CHKVYLFLFCS Trigger: ACTGCAGAAGAGGAAGAGGTATACTTTGTGGCAGCATTGGAGGCTGCTGTGACTAGGGAAGGTAACCCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CCA 72 bp | ACTGCAAACACACTTTTGGAAGATGAGGTGCTACTGTaGCCAACCACCAGGAGAAAGTGGGTAACCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: TANTLLEDEVLL*PTTRRKWVTWT Trigger: TGTCCAGGTTACCCACTTTCTCCTGGTGGTTGGCCACAGTAGCACCTCATCTTCCAAAAGTGTGTTTGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR TCA 72 bp | TTCCACTTCTTAACATTTTATCACAGTCAGGGTGACTaGGTTGGGGGCCACCTTGAGCAACATAGGAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: FHFLTFYHSQGD*VGGHLEQHRRL Trigger: GAGTCTCCTATGTTGCTCAAGGTGGCCCCCAACTCAGTCACCCTGACTGTGATAAAATGTTAAGAAGTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CCA 72 bp | AGTGGTCAGAATGTGTTAGATCCTGAGACCACAGCATaGCTTCCTCTTTCCGCTTCTAAGAGTTCCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SGQNVLDPETTA*LPLSASKSSFR Trigger: TCTGAAGGAACTCTTAGAAGCGGAAAGAGGAAGCCATGCTGTGGTCTCAGGATCTAACACATTCTGACCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR TCA 72 bp | TGGCTTAGAACTTTACAAAGTCACCTCGCATGGTACTaGACCCTTGTTTGCTATAGGAAATGGGGTTACCTT | + |
|
Preference number: 3 (lower is better) Translates to: WLRTLQSHLAWY*TLVCYRKWGYL Trigger: AAGGTAACCCCATTTCCTATAGCAAACAAGGGTTCAGTACCATGCGAGGTGACTTTGTAAAGTTCTAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR-3UTR CAA 90 bp | GAGAATTATCCCTGGAAACAACATAGTCACAAACAGAAACAAACTTCTGGGCCTACTGCAAACACACTTTaGGAAGATGAGGTGCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: ENYPWKQHSHKQKQTSGPTANTL*EDEVLL Trigger: CAGTAGCACCTCATCTTCCAAAAGTGTGTTTGCAGT...AGGCCCAGAAGTTTGTTTCTGTTTGTGACTATGTTGTTTCCAGGGATAATTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGCTTGACACCGAAACTCACGTCCCTCTACGCCAGGACCCTGCCAGGACCTGTGGGGAGCAACTaGAGAGGCTTCCCGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSLTPKLTSLYARTLPGPVGSN*RGFPFQ Trigger: CTGGAACGGGAAGCCTCTCCAGTTGCTCCCCACAGG...TCCTGGCAGGGTCCTGGCGTAGAGGGACGTGAGTTTCGGTGTCAAGCTGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR TCA 90 bp | CAGGGCAGCTTGACACCGAAACTCACGTCCCTCTACGCCAGGACCCTGCCAGGAAGGTGGTGGATGACATaGGCGAGGAAGTCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGSLTPKLTSLYARTLPGRWWMT*ARKSFL Trigger: GAGGAAGGACTTCCTCGCTCATGTCATCCACCACCT...TCCTGGCAGGGTCCTGGCGTAGAGGGACGTGAGTTTCGGTGTCAAGCTGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR TCA 90 bp | TCTGTGGGTCCACAGCAGTGGATAGAGGAGCAGTTCCGGCCTCCCAGTGTCCTGCAGCCAGGTGGTGGATaGCATGAGCGAGGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVGPQQWIEEQFRPPSVLQPGGG*HERGSP Trigger: AGGACTTCCTCGCTCATGTCATCCACCACCTGGCTG...CAGGACACTGGGAGGCCGGAACTGCTCCTCTATCCACTGCTGTGGACCCACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTGTGCAGAGAAGCACCTCGGCTGCCCAGGGTGGCTCAGGAGCCCTGGCAAGGCAGGATCAGAGTaGAGTACAGAATCCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RPCAEKHLGCPGWLRSPGKAGSE*STESRM Trigger: CATTCTGGATTCTGTACTGCACTCTGATCCTGCCTT...GCCAGGGCTCCTGAGCCACCCTGGGCAGCCGAGGTGCTTCTCTGCACAGGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR GCA 90 bp | CAGGGCAGCTTGACACCGAAACTCACGTCCCTCTACGCCAGGACCCTGCCAGGAGACTCCTGGAATTTCTaGAGCCTGCAAGGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGSLTPKLTSLYARTLPGDSWNF*SLQGLF Trigger: AAACAAGCCTTGCAGGCTGCAGAAATTCCAGGAGTC...TCCTGGCAGGGTCCTGGCGTAGAGGGACGTGAGTTTCGGTGTCAAGCTGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR GCA 90 bp | CAGGGCAGCTTGACACCGAAACTCACGTCCCTCTACGCCAGGACCCTGCCAGGACTCCCAGAGGTCATATaGCCATGGTTTGTCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSLTPKLTSLYARTLPGLPEVI*PWFVIQ Trigger: CTGTATGACAAACCATGGGCATATGACCTCTGGGAG...TCCTGGCAGGGTCCTGGCGTAGAGGGACGTGAGTTTCGGTGTCAAGCTGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CCA 90 bp | GCCCTGTGCAGAGAAGCACCTCGGCTGCCCAGGGTGGCTCAGGAGCCCTGGCAGGTACAGAATCCAGAATaGAAAAATAATGAATCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALCREAPRLPRVAQEPWQVQNPE*KNNESA Trigger: AGCCGATTCATTATTTTTCCATTCTGGATTCTGTAC...CTGCCAGGGCTCCTGAGCCACCCTGGGCAGCCGAGGTGCTTCTCTGCACAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR GCA 90 bp | ATCGGGGCTGACAGCACAGGGCAGCTTGACACCGAAACTCACGTCCCTCTACGCGGCTTGTTTTGCTTCTaGCGAATCCTAAGCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: IGADSTGQLDTETHVPLRGLFCF*RILSHL Trigger: AAGATGGCTTAGGATTCGGCAGAAGCAAAACAAGCC...GCGTAGAGGGACGTGAGTTTCGGTGTCAAGCTGCCCTGTGCTGTCAGCCCCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CAA 72 bp | GGCAGCCTGCCCTCTCCTTTGGCTCTAACTGCTCTCTaGCCACTGCAAACACACTTTTGGAAGATGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLPSPLALTAL*PLQTHFWKMRC Trigger: GCACCTCATCTTCCAAAAGTGTGTTTGCAGTGGCAAGAGAGCAGTTAGAGCCAAAGGAGAGGGCAGGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CCA 90 bp | TGCCTGGAGAAATCTCTGAACTCTGACCAGCCTGACTTAACTGCTGACCAATCCGATACTCCTCGCCTGTaGGGAGCAACTGGAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLEKSLNSDQPDLTADQSDTPRL*GATGEA Trigger: AGCCTCTCCAGTTGCTCCCCACAGGCGAGGAGTATC...GGATTGGTCAGCAGTTAAGTCAGGCTGGTCAGAGTTCAGAGATTTCTCCAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CCA 90 bp | GGCAGCCTGCCCTCTCCTTTGGCTCTAACTGCTCTCTTGCCACTGCAAACACACAGCCATCTTTCAACCTaGCGCTCTGTCAAGTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: GSLPSPLALTALLPLQTHSHLST*RSVKLH Trigger: GTGTAACTTGACAGAGCGCCAGGTTGAAAGATGGCT...GTGTGTTTGCAGTGGCAAGAGAGCAGTTAGAGCCAAAGGAGAGGGCAGGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CAA 72 bp | GGCTCTAACTGCTCTCTTGCCACTGCAAACACACTTTaGGAAGATGAGGTGCTACTGTGGCCAACCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSNCSLATANTL*EDEVLLWPTTR Trigger: CCTGGTGGTTGGCCACAGTAGCACCTCATCTTCCAAAAGTGTGTTTGCAGTGGCAAGAGAGCAGTTAGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR TCA 90 bp | TTGACACCGAAACTCACGTCCCTCTACGCCAGGACCCTGCCAGGAAGGCTCTGGAGGCATATGGAATTGTaGTGTATAAGTGGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTPKLTSLYARTLPGRLWRHMEL*CISGKL Trigger: AAGCTTCCCACTTATACATCACAATTCCATATGCCT...CCAGAGCCTTCCTGGCAGGGTCCTGGCGTAGAGGGACGTGAGTTTCGGTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR TCA 90 bp | CAGGGCAGCTTGACACCGAAACTCACGTCCCTCTACGCCAGGACCCTGCCAGGAATGTCAGATATATCATaGATAAACATCACGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGSLTPKLTSLYARTLPGMSDIS*INITRV Trigger: GACCCTCGTGATGTTTATTCATGATATATCTGACAT...TCCTGGCAGGGTCCTGGCGTAGAGGGACGTGAGTTTCGGTGTCAAGCTGCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR TCA 90 bp | CTGCGCAGTGGTCAGAATGTGTTAGATCCTGAGACCACAGCATGGCTTCCTCTTGCTGACCATTGGCAATaGGATGCCTGTTGGTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRSGQNVLDPETTAWLPLADHWQ*DACWSQ Trigger: TTGGGACCAACAGGCATCTCATTGCCAATGGTCAGC...AAGAGGAAGCCATGCTGTGGTCTCAGGATCTAACACATTCTGACCACTGCGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGTTCCTTCAGAATTTGAAGCTCCCAGGCATGCCACCCTGGGGCTGGCTGCAGCAAAGGCTGTCTaGGATAGTCATTCCAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LRVPSEFEAPRHATLGLAAAKAV*DSHSKP Trigger: AGGTTTGGAATGACTATCCCAGACAGCCTTTGCTGC...AGCCAGCCCCAGGGTGGCATGCCTGGGAGCTTCAAATTCTGAAGGAACTCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CCA 90 bp | TGCCTGGAGAAATCTCTGAACTCTGACCAGCCTGACTTAACTGCTGACCAATCCCTGTCTCTTTGCCCTTaGTGCTCTCTGCTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLEKSLNSDQPDLTADQSLSLCP*CSLLPL Trigger: AAGAGGAAGCAGAGAGCACCAAGGGCAAAGAGACAG...GGATTGGTCAGCAGTTAAGTCAGGCTGGTCAGAGTTCAGAGATTTCTCCAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CAA 72 bp | GAACTTTACAAAGTCACCTCGCATGGTACTGAACCCTaGTTTGCTATAGGAAATGGGGTTACCTTCCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELYKVTSHGTEP*FAIGNGVTFPS Trigger: ACTAGGGAAGGTAACCCCATTTCCTATAGCAAACAAGGGTTCAGTACCATGCGAGGTGACTTTGTAAAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR TCA 90 bp | ATAGTCACAAACAGAAACAAACTTCTGGGCCTTTGTACCTCCGGGTATCTTACACAGGCTAAACACCAGTaGCCAATAAAAACTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVTNRNKLLGLCTSGYLTQAKHQ*PIKTHL Trigger: GAGATGAGTTTTTATTGGTCACTGGTGTTTAGCCTG...TGTAAGATACCCGGAGGTACAAAGGCCCAGAAGTTTGTTTCTGTTTGTGACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CAA 72 bp | CAACATAGTCACAAACAGAAACAAACTTCTGGGCCTTaGTACCTCCGGGTATCTTACACATTAAGAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QHSHKQKQTSGP*YLRVSYTLRAI Trigger: AATGGCTCTTAATGTGTAAGATACCCGGAGGTACAAAGGCCCAGAAGTTTGTTTCTGTTTGTGACTATGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR TCA 90 bp | GGGATTCCCTTTTGTTTTATTGAAAGTCAGTATGGCTTAGAACTTTACAAAGTCATGATCTTCCAGGTCTaGCCACTTTATTGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIPFCFIESQYGLELYKVMIFQV*PLYCWR Trigger: CCTCCAACAATAAAGTGGTCAGACCTGGAAGATCAT...GACTTTGTAAAGTTCTAAGCCATACTGACTTTCAATAAAACAAAAGGGAATCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| 3UTR CAA 72 bp | AAGATACTTTGTTGGGAACAGAATTCTGAAGAGTTTTaGTTTGTTTGCTCGTATTTGCTTAGCCTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KILCWEQNSEEF*FVCSYLLSLKV Trigger: AACCTTCAGGCTAAGCAAATACGAGCAAACAAACAAAAACTCTTCAGAATTCTGTTCCCAACAAAGTATCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CAA 90 bp | GCCCTGTGCAGAGAAGCACCTCGGCTGCCCAGGGTGGCTCAGGAGCCCTGGCAGTGCAGCCTGCAAGGCTaGTTTTGCTTCTGCCGAATC | + |
|
Preference number: 5 (lower is better) Translates to: ALCREAPRLPRVAQEPWQCSLQG*FCFCRI Trigger: GATTCGGCAGAAGCAAAACAAGCCTTGCAGGCTGCA...CTGCCAGGGCTCCTGAGCCACCCTGGGCAGCCGAGGTGCTTCTCTGCACAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CAA 90 bp | GCCCTGTGCAGAGAAGCACCTCGGCTGCCCAGGGTGGCTCAGGAGCCCTGGCAGAAATACTCTGTCTCTTaGCCCTTGGTGCTCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALCREAPRLPRVAQEPWQKYSVS*PLVLSA Trigger: AGCAGAGAGCACCAAGGGCAAAGAGACAGAGTATTT...CTGCCAGGGCTCCTGAGCCACCCTGGGCAGCCGAGGTGCTTCTCTGCACAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS CCA 90 bp | TTCTTCTTCCCAAAGCGCCAGTCTGCACAGGATACTCCTCGCCTGTaGGGAGCAACTGGAGAGGCTTCCCGTTCCAGGCAGCTTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FFFPKRQSAQDTPRL*GATGEASRSRQLCS Trigger: AGAACAAAGCTGCCTGGAACGGGAAGCCTCTCCAGTTGCTCCCCACAGGCGAGGAGTATCCTGTGCAGACTGGCGCTTTGGGAAGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGGGTCCACAGCAGTGGATAGAGGAGCAGTTCCGGCCTCCCAGTGTCCTCTGACCACTTTATTGTaGGAGGAAGCCAGTATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCGSTAVDRGAVPASQCPLTTLL*EEASIS Trigger: AGAGATACTGGCTTCCTCCAACAATAAAGTGGTCAG...AGGACACTGGGAGGCCGGAACTGCTCCTCTATCCACTGCTGTGGACCCACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS GCA 90 bp | CGCCAGCAAGACTCCTGGAATTTCTGCAGCCTGCAAGGCTTGTTTTaGTTCTGCCGAATCCTAAGCCATCTTTCAACCTGGCGCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RQQDSWNFCSLQGLF*FCRILSHLSTWRSV Trigger: GACAGAGCGCCAGGTTGAAAGATGGCTTAGGATTCGGCAGAAGCAAAACAAGCCTTGCAGGCTGCAGAAATTCCAGGAGTCTTGCTGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGAGTTCCTTCAGAATTTGAAGCTCCCAGGCATGCCACCCTGGGGCTGGCTCCTGCAAGGCTTGTTTaGCTTCTGCCGAATCCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRVPSEFEAPRHATLGLAPARLV*LLPNPK Trigger: CTTAGGATTCGGCAGAAGCAAAACAAGCCTTGCAGG...AGCCAGCCCCAGGGTGGCATGCCTGGGAGCTTCAAATTCTGAAGGAACTCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CAA 90 bp | TTGACACCGAAACTCACGTCCCTCTACGCCAGGACCCTGCCAGGAAGGCTCTGGTCAGTATGTGATGGTTaGCTTGTGGAATGCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LTPKLTSLYARTLPGRLWSVCDG*LVECLK Trigger: TTTCAAGCATTCCACAAGCAAACCATCACATACTGA...CCAGAGCCTTCCTGGCAGGGTCCTGGCGTAGAGGGACGTGAGTTTCGGTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CAA 90 bp | CTGCGCAGTGGTCAGAATGTGTTAGATCCTGAGACCACAGCATGGCTTCCTCTTTCCTCTTCCTCTTCGTaGTCACTCCTCACATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRSGQNVLDPETTAWLPLSSSSS*SLLTSW Trigger: CCAGGATGTGAGGAGTGACAACGAAGAGGAAGAGGA...AAGAGGAAGCCATGCTGTGGTCTCAGGATCTAACACATTCTGACCACTGCGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS GCA 90 bp | TGGTCCCAAGGCCATTCTTCAAATACTCTGTCTCTTTGCCCTTGGTaGTCTCTGCTTCCTCTTCCTCCTCCTCTTCCTCTTCCTCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WSQGHSSNTLSLCPW*SLLPLPPPLPLPLR Trigger: ACGAAGAGGAAGAGGAAGAGGAGGAGGAAGAGGAAGCAGAGAGCACCAAGGGCAAAGAGACAGAGTATTTGAAGAATGGCCTTGGGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGAGTTCCTTCAGAATTTGAAGCTCCCAGGCATGCCACCCTGGGGCTGGCTCTGAAGGATCATGAGTaGGAGGTTGAGGAAGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRVPSEFEAPRHATLGLALKDHE*EVEEDV Trigger: TACATCTTCCTCAACCTCCAACTCATGATCCTTCAG...AGCCAGCCCCAGGGTGGCATGCCTGGGAGCTTCAAATTCTGAAGGAACTCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS CCA 90 bp | TGTTGGTCCCAAGGCCATTCTTCAAATACTCTGTCTCTTTGCCCTTaGTGCTCTCTGCTTCCTCTTCCTCCTCCTCTTCCTCTTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CWSQGHSSNTLSLCP*CSLLPLPPPLPLPL Trigger: AAGAGGAAGAGGAAGAGGAGGAGGAAGAGGAAGCAGAGAGCACCAAGGGCAAAGAGACAGAGTATTTGAAGAATGGCCTTGGGACCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS TCA 90 bp | GGAGGAAGCCAGTATCTCTCCGACCAGAACCATTTTCTAAACGTCTaGAACATTCTTCTTCCCAAAGCGCCAGTCTGCACAGGATACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGSQYLSDQNHFLNV*NILLPKAPVCTGYS Trigger: GGAGTATCCTGTGCAGACTGGCGCTTTGGGAAGAAGAATGTTTCAGACGTTTAGAAAATGGTTCTGGTCGGAGAGATACTGGCTTCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS TCA 90 bp | GTGGGAAGCTTTCACGAAGACAAGCCCATCATGATCTTCCAGGTCTaGCCACTTTATTGTTGGAGGAAGCCAGTATCTCTCCGACCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VGSFHEDKPIMIFQV*PLYCWRKPVSLRPE Trigger: TTCTGGTCGGAGAGATACTGGCTTCCTCCAACAATAAAGTGGTCAGACCTGGAAGATCATGATGGGCTTGTCTTCGTGAAAGCTTCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS GCA 90 bp | CAAGACTCCTGGAATTTCTGCAGCCTGCAAGGCTTGTTTTGCTTCTaGCGAATCCTAAGCCATCTTTCAACCTGGCGCTCTGTCAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QDSWNFCSLQGLFCF*RILSHLSTWRSVKL Trigger: TAACTTGACAGAGCGCCAGGTTGAAAGATGGCTTAGGATTCGGCAGAAGCAAAACAAGCCTTGCAGGCTGCAGAAATTCCAGGAGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS GCA 90 bp | CAAAGGCTGTCTGGGATAGTCATTCCAAACCTCCCAGAGGTCATATaGCCATGGTTTGTCATACAGAAATACAGCTCCAGCCATGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: QRLSGIVIPNLPEVI*PWFVIQKYSSSHGY Trigger: ATAACCATGGCTGGAGCTGTATTTCTGTATGACAAACCATGGGCATATGACCTCTGGGAGGTTTGGAATGACTATCCCAGACAGCCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS CCA 90 bp | CTGTCTGGGATAGTCATTCCAAACCTCCCAGAGGTCATATGCCCATaGTTTGTCATACAGAAATACAGCTCCAGCCATGGTTATCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSGIVIPNLPEVICP*FVIQKYSSSHGYQQ Trigger: TTGCTGATAACCATGGCTGGAGCTGTATTTCTGTATGACAAACCATGGGCATATGACCTCTGGGAGGTTTGGAATGACTATCCCAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS-3UTR CAA 90 bp | ATAGTCACAAACAGAAACAAACTTCTGGGCCTTTGTACCTCCGGGTATCTTACAGCAATGAGATGCCTGTaGGTCCCAAGGCCATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IVTNRNKLLGLCTSGYLTAMRCL*VPRPFF Trigger: GAAGAATGGCCTTGGGACCAACAGGCATCTCATTGC...TGTAAGATACCCGGAGGTACAAAGGCCCAGAAGTTTGTTTCTGTTTGTGACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGACCAATCCACGGGTATTCCACTTCTTAACATTTTATCACAGTCAGGGGGTCTGACCACTTTATaGTTGGAGGAAGCCAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: TADQSTGIPLLNILSQSGGLTTL*LEEASI Trigger: GATACTGGCTTCCTCCAACAATAAAGTGGTCAGACC...CCCTGACTGTGATAAAATGTTAAGAAGTGGAATACCCGTGGATTGGTCAGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS-3UTR CAA 90 bp | AATGGGGTTACCTTCCCTAGTCACAGCAGCCTCCAATGCTGCCACAAAGTATACTCATATGCCCATGGTTaGTCATACAGAAATACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NGVTFPSHSSLQCCHKVYSYAHG*SYRNTA Trigger: AGCTGTATTTCTGTATGACAAACCATGGGCATATGA...GTATACTTTGTGGCAGCATTGGAGGCTGCTGTGACTAGGGAAGGTAACCCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS TCA 90 bp | ATTGTGATGTATAAGTGGGAAGCTTTCACGAAGACAAGCCCATCATaGTCTTCCAGGTCTGACCACTTTATTGTTGGAGGAAGCCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: IVMYKWEAFTKTSPS*SSRSDHFIVGGSQY Trigger: ATACTGGCTTCCTCCAACAATAAAGTGGTCAGACCTGGAAGATCATGATGGGCTTGTCTTCGTGAAAGCTTCCCACTTATACATCACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS TCA 90 bp | GAGGAAGTCCTTCCTCTTGATATCAGTGCTCAGGCTAAACACCAGTaGCCAATAAAAACTCATCTCCAAAATGTAGTACCAGTACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EEVLPLDISAQAKHQ*PIKTHLQNVVPVLG Trigger: TCCCAGTACTGGTACTACATTTTGGAGATGAGTTTTTATTGGTCACTGGTGTTTAGCCTGAGCACTGATATCAAGAGGAAGGACTTCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS-3UTR CAA 90 bp | TTACCTTCTGCCGTCAAAGCAGAAAAAGAAGTTGGACAGTATAGCAATAAACAAAGGAAGTCCTTCCTCTaGATATCAGTGCTCAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LPSAVKAEKEVGQYSNKQRKSFL*ISVLRL Trigger: TAGCCTGAGCACTGATATCAAGAGGAAGGACTTCCT...TTGTTTATTGCTATACTGTCCAACTTCTTTTTCTGCTTTGACGGCAGAAGGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS CCA 72 bp | CCAAAGCGCCAGTCTGCACAGGATACTCCTCGCCTGTaGGGAGCAACTGGAGAGGCTTCCCGTTCCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PKRQSAQDTPRL*GATGEASRSRQ Trigger: CTGCCTGGAACGGGAAGCCTCTCCAGTTGCTCCCCACAGGCGAGGAGTATCCTGTGCAGACTGGCGCTTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS CCA 72 bp | GTCTGCACAGGATACTCCTCGCCTGTGGGGAGCAACTaGAGAGGCTTCCCGTTCCAGGCAGCTTTGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VCTGYSSPVGSN*RGFPFQAALFS Trigger: TGAGAACAAAGCTGCCTGGAACGGGAAGCCTCTCCAGTTGCTCCCCACAGGCGAGGAGTATCCTGTGCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066475.11 |
||
| CDS CAA 72 bp | GCTTCCTCTTCCTCCTCCTCTTCCTCTTCCTCTTCGTaGTCACTCCTCACATCCTGGACGTTCTGCGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: ASSSSSSSSSSS*SLLTSWTFCVN Trigger: ATTCACGCAGAACGTCCAGGATGTGAGGAGTGACAACGAAGAGGAAGAGGAAGAGGAGGAGGAAGAGGAAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS CAA 90 bp | TCGCCAGCAAGACTCCTGGAATTTCTGCAGCCTGCAAGGCTTGTTTaGCTTCTGCCGAATCCTAAGCCATCTTTCAACCTGGCGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPARLLEFLQPARLV*LLPNPKPSFNLALC Trigger: ACAGAGCGCCAGGTTGAAAGATGGCTTAGGATTCGGCAGAAGCAAAACAAGCCTTGCAGGCTGCAGAAATTCCAGGAGTCTTGCTGGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS CAA 90 bp | GTGCTCTCTGCTTCCTCTTCCTCCTCCTCTTCCTCTTCCTCTTCGTaGTCACTCCTCACATCCTGGACGTTCTGCGTGAATATGCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLSASSSSSSSSSSS*SLLTSWTFCVNMHL Trigger: CAGATGCATATTCACGCAGAACGTCCAGGATGTGAGGAGTGACAACGAAGAGGAAGAGGAAGAGGAGGAGGAAGAGGAAGCAGAGAGCAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS CAA 90 bp | GTAAATCGCCAGCAAGACTCCTGGAATTTCTGCAGCCTGCAAGGCTaGTTTTGCTTCTGCCGAATCCTAAGCCATCTTTCAACCTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: VNRQQDSWNFCSLQG*FCFCRILSHLSTWR Trigger: GCGCCAGGTTGAAAGATGGCTTAGGATTCGGCAGAAGCAAAACAAGCCTTGCAGGCTGCAGAAATTCCAGGAGTCTTGCTGGCGATTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS CAA 90 bp | CTGTTGGTCCCAAGGCCATTCTTCAAATACTCTGTCTCTTTGCCCTaGGTGCTCTCTGCTTCCTCTTCCTCCTCCTCTTCCTCTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLVPRPFFKYSVSLP*VLSASSSSSSSSSS Trigger: AGAGGAAGAGGAAGAGGAGGAGGAAGAGGAAGCAGAGAGCACCAAGGGCAAAGAGACAGAGTATTTGAAGAATGGCCTTGGGACCAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS CAA 90 bp | AGATGCCTGTTGGTCCCAAGGCCATTCTTCAAATACTCTGTCTCTTaGCCCTTGGTGCTCTCTGCTTCCTCTTCCTCCTCCTCTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RCLLVPRPFFKYSVS*PLVLSASSSSSSSS Trigger: AGAGGAAGAGGAGGAGGAAGAGGAAGCAGAGAGCACCAAGGGCAAAGAGACAGAGTATTTGAAGAATGGCCTTGGGACCAACAGGCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS GCA 72 bp | TGGAATTTCTGCAGCCTGCAAGGCTTGTTTTGCTTCTaGCGAATCCTAAGCCATCTTTCAACCTGGCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: WNFCSLQGLFCF*RILSHLSTWRS Trigger: AGAGCGCCAGGTTGAAAGATGGCTTAGGATTCGGCAGAAGCAAAACAAGCCTTGCAGGCTGCAGAAATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS CAA 90 bp | GATAAAGTAACCCCAGTAAACGTGGAGGCCCTGAAGGATCATGAGTaGGAGGTTGAGGAAGATGTAGGAGAAGAAGGGCTCGAGATAGTG | + |
|
Preference number: 6 (lower is better) Translates to: DKVTPVNVEALKDHE*EVEEDVGEEGLEIV Trigger: CACTATCTCGAGCCCTTCTTCTCCTACATCTTCCTCAACCTCCAACTCATGATCCTTCAGGGCCTCCACGTTTACTGGGGTTACTTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS CCA 72 bp | TCTTCCTCTTCCTCTTCGTTGTCACTCCTCACATCCTaGACGTTCTGCGTGAATATGCATCTGTTGAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSLSLLTS*TFCVNMHLLSI Trigger: GATGCTCAACAGATGCATATTCACGCAGAACGTCCAGGATGTGAGGAGTGACAACGAAGAGGAAGAGGAAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS CAA 72 bp | GCCCATCATGATCTTCCAGGTCTGACCACTTTATTGTaGGAGGAAGCCAGTATCTCTCCGACCAGAACCATT | + |
|
Preference number: 6 (lower is better) Translates to: AHHDLPGLTTLL*EEASISPTRTI Trigger: AATGGTTCTGGTCGGAGAGATACTGGCTTCCTCCAACAATAAAGTGGTCAGACCTGGAAGATCATGATGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS CAA 72 bp | AGACTCCTGGAATTTCTGCAGCCTGCAAGGCTTGTTTaGCTTCTGCCGAATCCTAAGCCATCTTTCAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLLEFLQPARLV*LLPNPKPSFNL Trigger: CAGGTTGAAAGATGGCTTAGGATTCGGCAGAAGCAAAACAAGCCTTGCAGGCTGCAGAAATTCCAGGAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS TCA 72 bp | TTTCACGAAGACAAGCCCATCATGATCTTCCAGGTCTaGCCACTTTATTGTTGGAGGAAGCCAGTATCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FHEDKPIMIFQV*PLYCWRKPVSL Trigger: GAGAGATACTGGCTTCCTCCAACAATAAAGTGGTCAGACCTGGAAGATCATGATGGGCTTGTCTTCGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS CCA 72 bp | ATAGTCATTCCAAACCTCCCAGAGGTCATATGCCCATaGTTTGTCATACAGAAATACAGCTCCAGCCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: IVIPNLPEVICP*FVIQKYSSSHG Trigger: ACCATGGCTGGAGCTGTATTTCTGTATGACAAACCATGGGCATATGACCTCTGGGAGGTTTGGAATGACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS CCA 72 bp | CAAAGGCAGGATCAGAGTGCAGTACAGAATCCAGAATaGAAAAATAATGAATCGGCTAATGAAGAAGACGAC | + |
|
Preference number: 6 (lower is better) Translates to: QRQDQSAVQNPE*KNNESANEEDD Trigger: GTCGTCTTCTTCATTAGCCGATTCATTATTTTTCCATTCTGGATTCTGTACTGCACTCTGATCCTGCCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||
| CDS TCA 72 bp | CTTCCTCTTGATATCAGTGCTCAGGCTAAACACCAGTaGCCAATAAAAACTCATCTCCAAAATGTAGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: LPLDISAQAKHQ*PIKTHLQNVVP Trigger: TGGTACTACATTTTGGAGATGAGTTTTTATTGGTCACTGGTGTTTAGCCTGAGCACTGATATCAAGAGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066475.11 ENSMUST00000208521.2 |
||