Pregenerated sensors for CERS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015714Ensembl transcript IDs: ENSMUST00000015858.12, ENSMUST00000129267.8, ENSMUST00000139498.8, ENSMUST00000139866.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTAAGGAAGAGAAAGTTAAAAGTAGCTCAGCTTTCTTTCTTGGCCTaGGCTAGGGAGCTTAGAAAGATGGAACCTTGGTCCAGCTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: LRKRKLKVAQLSFLA*ARELRKMEPWSSFG Trigger: GCCAAAGCTGGACCAAGGTTCCATCTTTCTAAGCTCCCTAGCTCAGGCCAAGAAAGAAAGCTGAGCTACTTTTAACTTTCTCTTCCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR TCA 90 bp | TTCTTAGGAATGAGGAATGTGAGTTATGATTCCAACCCTCAGAGCTaGAGAAGGATTAGCAAGAAGGGTAGCTTAGAAGGTAGAGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: FLGMRNVSYDSNPQS*RRISKKGSLEGREG Trigger: TCCCTCTCTACCTTCTAAGCTACCCTTCTTGCTAATCCTTCTTCAGCTCTGAGGGTTGGAATCATAACTCACATTCCTCATTCCTAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR-3UTR CCA 90 bp | GCTAGGGAGCTTAGAAAGATGGAACCTTGGTCCAGCTTTGGCAGAATGAGGCCCAACAGGATGTGGATGTaGCCAAGCCTCCTTTCTACC | + |
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Preference number: 2 (lower is better) Translates to: ARELRKMEPWSSFGRMRPNRMWM*PSLLST Trigger: GGTAGAAAGGAGGCTTGGCCACATCCACATCCTGTT...GGGCCTCATTCTGCCAAAGCTGGACCAAGGTTCCATCTTTCTAAGCTCCCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR-3UTR CCA 90 bp | AGAATGAGGCCCAGAAAAGGGACAGTAAGGCACAACCCTGGCTTGAAGTCAGGGTCTCTCAACAGGATGTaGATGTGGCCAAGCCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: RMRPRKGTVRHNPGLKSGSLNRM*MWPSLL Trigger: AAGGAGGCTTGGCCACATCCACATCCTGTTGAGAGA...CCCTGACTTCAAGCCAGGGTTGTGCCTTACTGTCCCTTTTCTGGGCCTCATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR-3UTR TCA 90 bp | AGAATGAGGCCCAGAAAAGGGACAGTAAGGCACAACCCTGGCTTGAAGTCAGGGGAGGAATGTGAGTTATaGTTCCAACCCTCAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: RMRPRKGTVRHNPGLKSGEECEL*FQPSEL Trigger: CAGCTCTGAGGGTTGGAATCATAACTCACATTCCTC...CCCTGACTTCAAGCCAGGGTTGTGCCTTACTGTCCCTTTTCTGGGCCTCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR CAA 90 bp | GGCAGAATGAGGCCCAGAAAAGGGACAGTAAGGCACAACCCTGGCTaGAAGTCAGGGAGTCAAAGGCAAACAGCTAGCTCCAAATTCTTA | + |
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Preference number: 2 (lower is better) Translates to: GRMRPRKGTVRHNPG*KSGSQRQTASSKFL Trigger: TAAGAATTTGGAGCTAGCTGTTTGCCTTTGACTCCCTGACTTCAAGCCAGGGTTGTGCCTTACTGTCCCTTTTCTGGGCCTCATTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR-3UTR TCA 90 bp | CATTTTGGTCTGAAATGGTCCCTCGCCGAAATATCAGGTCCTACCTGTAGTTGTCTTGGCCTCATGCATTaGTGTGGGAGGCAGCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: HFGLKWSLAEISGPTCSCLGLMH*CGRQLG Trigger: TCCTAGCTGCCTCCCACATCAATGCATGAGGCCAAG...ACAACTACAGGTAGGACCTGATATTTCGGCGAGGGACCATTTCAGACCAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR-3UTR CCA 90 bp | AGGCCCAGAAAAGGGACAGTAAGGCACAACCCTGGCTTGAAGTCAGGGAGTCAAAGGCTGTTTAGAGTCTaGTTTAAAGGCAACTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: RPRKGTVRHNPGLKSGSQRLFRV*FKGNWV Trigger: CACCCAGTTGCCTTTAAACCAGACTCTAAACAGCCT...TTGACTCCCTGACTTCAAGCCAGGGTTGTGCCTTACTGTCCCTTTTCTGGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR-3UTR TCA 90 bp | CATTTTGGTCTGAAATGGTCCCTCGCCGAAATATCAGGTCCTACCTGTAGTTGTTCCAACCCTCAGAGCTaGAGAAGGATTAGCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: HFGLKWSLAEISGPTCSCSNPQS*RRISKK Trigger: CTTCTTGCTAATCCTTCTTCAGCTCTGAGGGTTGGA...ACAACTACAGGTAGGACCTGATATTTCGGCGAGGGACCATTTCAGACCAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGAAGGGTAGCTTAGAAGGTAGAGAGGGAAATGAGACTATGTCTCTCAACCCTCATGCATTGATGTaGGAGGCAGCTAGGACAATG | + |
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Preference number: 2 (lower is better) Translates to: SKKGSLEGREGNETMSLNPHALM*EAARTM Trigger: CATTGTCCTAGCTGCCTCCCACATCAATGCATGAGG...GTTGAGAGACATAGTCTCATTTCCCTCTCTACCTTCTAAGCTACCCTTCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR-3UTR CCA 90 bp | GGGGCATGTATGCATACCCTCCTTCACTTCATTGACTTGTATTTAAGGAAGAGAGGGAGCTTAGAAAGATaGAACCTTGGTCCAGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: GACMHTLLHFIDLYLRKRGSLER*NLGPAL Trigger: CAAAGCTGGACCAAGGTTCCATCTTTCTAAGCTCCC...TCTCTTCCTTAAATACAAGTCAATGAAGTGAAGGAGGGTATGCATACATGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR-3UTR TCA 90 bp | TCAGGGAGTCAAAGGCAAACAGCTAGCTCCAAATTCTTAGGAATGAGGAATGTGTTAAAGGCAACTGGGTaGAAAAAGAAGTGGAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SGSQRQTASSKFLGMRNVLKATG*KKKWKV Trigger: GACCTTCCACTTCTTTTTTCACCCAGTTGCCTTTAA...CACATTCCTCATTCCTAAGAATTTGGAGCTAGCTGTTTGCCTTTGACTCCCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR TCA 72 bp | ATGAGGAATGTGAGTTATGATTCCAACCCTCAGAGCTaGAGAAGGATTAGCAAGAAGGGTAGCTTAGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: MRNVSYDSNPQS*RRISKKGSLEG Trigger: ACCTTCTAAGCTACCCTTCTTGCTAATCCTTCTTCAGCTCTGAGGGTTGGAATCATAACTCACATTCCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CCA 90 bp | GCTAGGGAGCTTAGAAAGATGGAACCTTGGTCCAGCTTTGGCAGAATGAGGCCCCTACCTCCACCTGCTTaGGCTGCTTGCCGCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: ARELRKMEPWSSFGRMRPLPPPA*AACRWS Trigger: AGACCAGCGGCAAGCAGCCCAAGCAGGTGGAGGTAG...GGGCCTCATTCTGCCAAAGCTGGACCAAGGTTCCATCTTTCTAAGCTCCCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CCA 90 bp | ACTATGTCTCTCAACAGGATGTGGATGTGGCCAAGCCTCCTTTCTACCTGGAGAGTTCCAAGGTGGCATTaGGAGGTGCCCGCAGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: TMSLNRMWMWPSLLSTWRVPRWH*EVPAVG Trigger: CCCGACTGCGGGCACCTCCCAATGCCACCTTGGAAC...TCTCCAGGTAGAAAGGAGGCTTGGCCACATCCACATCCTGTTGAGAGACATAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CCA 90 bp | GTCTCTCAACAGGATGTGGATGTGGCCAAGCCTCCTTTCTACCTGGAGATAGGCAACCAGCGTTCTACCTaGCGTCCAGAGAGCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: VSQQDVDVAKPPFYLEIGNQRST*RPESPL Trigger: GAGTGGGCTCTCTGGACGCCAGGTAGAACGCTGGTT...GCCTATCTCCAGGTAGAAAGGAGGCTTGGCCACATCCACATCCTGTTGAGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR GCA 90 bp | GTCTCTCAACAGGATGTGGATGTGGCCAAGCCTCCTTTCTACCTGGAGATAGGCCCTGCTTGGGCTGCTTaGCGCTGGTCTGGTAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: VSQQDVDVAKPPFYLEIGPAWAA*RWSGRN Trigger: ATTTCTACCAGACCAGCGGCAAGCAGCCCAAGCAGG...GCCTATCTCCAGGTAGAAAGGAGGCTTGGCCACATCCACATCCTGTTGAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CCA 90 bp | TCAGGGAGTCAAAGGCAAACAGCTAGCTCCAAATTCTTAGGAATGAGGAATGTGAGACTGGGCCTGTCCTaGTTGCGGCGGCGGCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SGSQRQTASSKFLGMRNVRLGLS*LRRRRN Trigger: GTTCCGCCGCCGCCGCAACCAGGACAGGCCCAGTCT...CACATTCCTCATTCCTAAGAATTTGGAGCTAGCTGTTTGCCTTTGACTCCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR CAA 72 bp | AGGCCCAGAAAAGGGACAGTAAGGCACAACCCTGGCTaGAAGTCAGGGAGTCAAAGGCAAACAGCTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RPRKGTVRHNPG*KSGSQRQTASS Trigger: GGAGCTAGCTGTTTGCCTTTGACTCCCTGACTTCAAGCCAGGGTTGTGCCTTACTGTCCCTTTTCTGGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR GCA 90 bp | AGGCCCAGAAAAGGGACAGTAAGGCACAACCCTGGCTTGAAGTCAGGGAGTCAACATGATGAGGGTCCCTaGCCGGACGTAATTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: RPRKGTVRHNPGLKSGSQHDEGP*PDVIGK Trigger: TTTGCCAATTACGTCCGGGCAGGGACCCTCATCATG...TTGACTCCCTGACTTCAAGCCAGGGTTGTGCCTTACTGTCCCTTTTCTGGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CCA 90 bp | GTCTCTCAACAGGATGTGGATGTGGCCAAGCCTCCTTTCTACCTGGAGATAGGCCTGCCCGGACGTAATTaGCAAACCAGGAGAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VSQQDVDVAKPPFYLEIGLPGRN*QTRRSR Trigger: TCTGCTTCTCCTGGTTTGCCAATTACGTCCGGGCAG...GCCTATCTCCAGGTAGAAAGGAGGCTTGGCCACATCCACATCCTGTTGAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CCA 90 bp | AGGCCCAGAAAAGGGACAGTAAGGCACAACCCTGGCTTGAAGTCAGGGAGTCAATTATTGAGGATGGGGTaGCCATTAGCTAGGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: RPRKGTVRHNPGLKSGSQLLRMG*PLARSR Trigger: CCGGCTCCTAGCTAATGGCCACCCCATCCTCAATAA...TTGACTCCCTGACTTCAAGCCAGGGTTGTGCCTTACTGTCCCTTTTCTGGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR TCA 90 bp | ACTATGTCTCTCAACAGGATGTGGATGTGGCCAAGCCTCCTTTCTACCTGGAGAGGGCCATACGCAGAATaGAGTAGGCCCAGAAGATAT | + |
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Preference number: 4 (lower is better) Translates to: TMSLNRMWMWPSLLSTWRGPYAE*SRPRRY Trigger: ATATCTTCTGGGCCTACTTCATTCTGCGTATGGCCC...TCTCCAGGTAGAAAGGAGGCTTGGCCACATCCACATCCTGTTGAGAGACATAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR GCA 90 bp | GCTAGGGAGCTTAGAAAGATGGAACCTTGGTCCAGCTTTGGCAGAATGAGGCCCGTGGGTATATCATCGTaGAGTGTAGGATCCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: ARELRKMEPWSSFGRMRPVGISS*SVGSRK Trigger: CTTTCTGGATCCTACACTGCACGATGATATACCCAC...GGGCCTCATTCTGCCAAAGCTGGACCAAGGTTCCATCTTTCTAAGCTCCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CCA 90 bp | AGGCCCAGAAAAGGGACAGTAAGGCACAACCCTGGCTTGAAGTCAGGGAGTCAAAGAGATCTGAGGCTTTaGCATAGACACGTCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: RPRKGTVRHNPGLKSGSQRDLRL*HRHVHL Trigger: AAGATGGACGTGTCTATGCCAAAGCCTCAGATCTCT...TTGACTCCCTGACTTCAAGCCAGGGTTGTGCCTTACTGTCCCTTTTCTGGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR CAA 72 bp | TTTCTCCCCAGAGCTCAAATGCCCCTAAAGGGAAGCTaGGCTAGTTTCTTGGCCTCATGCATTGATGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: FLPRAQMPLKGS*ASFLASCIDVG Trigger: TCCCACATCAATGCATGAGGCCAAGAAACTAGCCAAGCTTCCCTTTAGGGGCATTTGAGCTCTGGGGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR TCA 90 bp | GCTAGGGAGCTTAGAAAGATGGAACCTTGGTCCAGCTTTGGCAGAATGAGGCCCAATACTGAGAAGGGATaGTGCTCTGTATGGGATATC | + |
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Preference number: 4 (lower is better) Translates to: ARELRKMEPWSSFGRMRPNTEKG*CSVWDI Trigger: GATATCCCATACAGAGCATCATCCCTTCTCAGTATT...GGGCCTCATTCTGCCAAAGCTGGACCAAGGTTCCATCTTTCTAAGCTCCCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR TCA 90 bp | ACTATGTCTCTCAACAGGATGTGGATGTGGCCAAGCCTCCTTTCTACCTGGAGATCAGCTTTCCAGTTATaGACTTGTGGGCCATACGCA | + |
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Preference number: 4 (lower is better) Translates to: TMSLNRMWMWPSLLSTWRSAFQL*TCGPYA Trigger: TGCGTATGGCCCACAAGTTCATAACTGGAAAGCTGA...TCTCCAGGTAGAAAGGAGGCTTGGCCACATCCACATCCTGTTGAGAGACATAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CCA 90 bp | CATTTTGGTCTGAAATGGTCCCTCGCCGAAATATCAGGTCCTACCTGTAGTTGTAGAAATGTTCCAAGGTaGCATTGGGAGGTGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: HFGLKWSLAEISGPTCSCRNVPR*HWEVPA Trigger: TGCGGGCACCTCCCAATGCCACCTTGGAACATTTCT...ACAACTACAGGTAGGACCTGATATTTCGGCGAGGGACCATTTCAGACCAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR GCA 90 bp | GGGGCATGTATGCATACCCTCCTTCACTTCATTGACTTGTATTTAAGGAAGAGACCAGAGAGCCCACTCTaGCGTGACAAAAGGTCTACC | + |
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Preference number: 4 (lower is better) Translates to: GACMHTLLHFIDLYLRKRPESPL*RDKRST Trigger: GGTAGACCTTTTGTCACGGCAGAGTGGGCTCTCTGG...TCTCTTCCTTAAATACAAGTCAATGAAGTGAAGGAGGGTATGCATACATGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CCA 90 bp | TCAGGGAGTCAAAGGCAAACAGCTAGCTCCAAATTCTTAGGAATGAGGAATGTGTGGGCTGCTTGCCGCTaGTCTGGTAGAAATGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SGSQRQTASSKFLGMRNVWAACR*SGRNVP Trigger: TGGAACATTTCTACCAGACCAGCGGCAAGCAGCCCA...CACATTCCTCATTCCTAAGAATTTGGAGCTAGCTGTTTGCCTTTGACTCCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR TCA 90 bp | AGCAAGAAGGGTAGCTTAGAAGGTAGAGAGGGAAATGAGACTATGTCTCTCAACCTTCTCGGAACTTTTTaGGAAGACTGGGCCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SKKGSLEGREGNETMSLNLLGTF*EDWACP Trigger: AGGACAGGCCCAGTCTTCTCAAAAAGTTCCGAGAAG...GTTGAGAGACATAGTCTCATTTCCCTCTCTACCTTCTAAGCTACCCTTCTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR TCA 90 bp | TCAGGGAGTCAAAGGCAAACAGCTAGCTCCAAATTCTTAGGAATGAGGAATGTGCGATGGCGAACACAATaGAGAGGTTGTTGCAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SGSQRQTASSKFLGMRNVRWRTQ*RGCCRC Trigger: ACACCTGCAACAACCTCTTCATTGTGTTCGCCATCG...CACATTCCTCATTCCTAAGAATTTGGAGCTAGCTGTTTGCCTTTGACTCCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CCA 90 bp | CACAACCCTGGCTTGAAGTCAGGGAGTCAAAGGCAAACAGCTAGCTCCAAATTCATGATAGTGGCCACATaGTGGATGATCTGTTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: HNPGLKSGSQRQTASSKFMIVAT*WMICSL Trigger: TAAGGAACAGATCATCCACCATGTGGCCACTATCAT...GAATTTGGAGCTAGCTGTTTGCCTTTGACTCCCTGACTTCAAGCCAGGGTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CCA 90 bp | ACTATGTCTCTCAACAGGATGTGGATGTGGCCAAGCCTCCTTTCTACCTGGAGAATAGTGGCCACATGGTaGATGATCTGTTCCTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: TMSLNRMWMWPSLLSTWRIVATW*MICSLK Trigger: TTTTAAGGAACAGATCATCCACCATGTGGCCACTAT...TCTCCAGGTAGAAAGGAGGCTTGGCCACATCCACATCCTGTTGAGAGACATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR TCA 90 bp | AGAAGGATTAGCAAGAAGGGTAGCTTAGAAGGTAGAGAGGGAAATGAGACTATGTGTGATGTAGAGATCTaGGGCTTTGGCATAGACACG | + |
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Preference number: 4 (lower is better) Translates to: RRISKKGSLEGREGNETMCDVEI*GFGIDT Trigger: CGTGTCTATGCCAAAGCCTCAGATCTCTACATCACA...CATAGTCTCATTTCCCTCTCTACCTTCTAAGCTACCCTTCTTGCTAATCCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CCA 90 bp | TCAGGGAGTCAAAGGCAAACAGCTAGCTCCAAATTCTTAGGAATGAGGAATGTGCCAGTTATGAACTTGTaGGCCATACGCAGAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: SGSQRQTASSKFLGMRNVPVMNL*AIRRMK Trigger: CTTCATTCTGCGTATGGCCCACAAGTTCATAACTGG...CACATTCCTCATTCCTAAGAATTTGGAGCTAGCTGTTTGCCTTTGACTCCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR TCA 90 bp | AGAAGGATTAGCAAGAAGGGTAGCTTAGAAGGTAGAGAGGGAAATGAGACTATGCAATTAGGTAATACGTaGATCTCCAGCTGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RRISKKGSLEGREGNETMQLGNT*ISSWLL Trigger: GAGAAGCCAGCTGGAGATTCACGTATTACCTAATTG...CATAGTCTCATTTCCCTCTCTACCTTCTAAGCTACCCTTCTTGCTAATCCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR TCA 90 bp | AGCAAGAAGGGTAGCTTAGAAGGTAGAGAGGGAAATGAGACTATGTCTCTCAACCAGTCATTCTTAGGATaGTTGTTATTGAGGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: SKKGSLEGREGNETMSLNQSFLG*LLLRMG Trigger: CCCCATCCTCAATAACAATCATCCTAAGAATGACTG...GTTGAGAGACATAGTCTCATTTCCCTCTCTACCTTCTAAGCTACCCTTCTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| 3UTR CAA 72 bp | GGGGCATGTATGCATACCCTCCTTCACTTCATTGACTaGTATTTAAGGAAGAGAAAGTTAAAAGTAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GACMHTLLHFID*YLRKRKLKVAQ Trigger: CTGAGCTACTTTTAACTTTCTCTTCCTTAAATACAAGTCAATGAAGTGAAGGAGGGTATGCATACATGCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS CCA 90 bp | CTGGGCCTGTCCTGGTTGCGGCGGCGGCGGAACCAGCGTTCTACCTaGCGTCCAGAGAGCCCACTCTGCCGTGACAAAAGGTCTACCTCC | + |
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Preference number: 5 (lower is better) Translates to: LGLSWLRRRRNQRST*RPESPLCRDKRSTS Trigger: GGAGGTAGACCTTTTGTCACGGCAGAGTGGGCTCTCTGGACGCCAGGTAGAACGCTGGTTCCGCCGCCGCCGCAACCAGGACAGGCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS GCA 90 bp | CGGCGGCGGAACCAGCGTTCTACCTGGCGTCCAGAGAGCCCACTCTaGCGTGACAAAAGGTCTACCTCCACCTGCTTGGGCTGCTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: RRRNQRSTWRPESPL*RDKRSTSTCLGCLP Trigger: CGGCAAGCAGCCCAAGCAGGTGGAGGTAGACCTTTTGTCACGGCAGAGTGGGCTCTCTGGACGCCAGGTAGAACGCTGGTTCCGCCGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS CCA 90 bp | CTCCAGCTGGCTTCTCGGAACTTTTTGAGAAGACTGGGCCTGTCCTaGTTGCGGCGGCGGCGGAACCAGCGTTCTACCTGGCGTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: LQLASRNFLRRLGLS*LRRRRNQRSTWRPE Trigger: CTCTGGACGCCAGGTAGAACGCTGGTTCCGCCGCCGCCGCAACCAGGACAGGCCCAGTCTTCTCAAAAAGTTCCGAGAAGCCAGCTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139866.2 |
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| CDS-3UTR CAA 90 bp | AGGCCCAGAAAAGGGACAGTAAGGCACAACCCTGGCTTGAAGTCAGGGAGTCAACTGGGCCTGTCCTGGTaGCGGCGGCGGCGGAACCAG | + |
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Preference number: 5 (lower is better) Translates to: RPRKGTVRHNPGLKSGSQLGLSW*RRRRNQ Trigger: CTGGTTCCGCCGCCGCCGCAACCAGGACAGGCCCAG...TTGACTCCCTGACTTCAAGCCAGGGTTGTGCCTTACTGTCCCTTTTCTGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS CCA 90 bp | GCCGTGACAAAAGGTCTACCTCCACCTGCTTGGGCTGCTTGCCGCTaGTCTGGTAGAAATGTTCCAAGGTGGCATTGGGAGGTGCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: AVTKGLPPPAWAACR*SGRNVPRWHWEVPA Trigger: TGCGGGCACCTCCCAATGCCACCTTGGAACATTTCTACCAGACCAGCGGCAAGCAGCCCAAGCAGGTGGAGGTAGACCTTTTGTCACGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS-3UTR CAA 90 bp | AGGCCCAGAAAAGGGACAGTAAGGCACAACCCTGGCTTGAAGTCAGGGAGTCAACTAGGAGCCGGCTCTTaGCTCCTGCCCCAGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: RPRKGTVRHNPGLKSGSQLGAGS*LLPQLQ Trigger: CTGCAGCTGGGGCAGGAGCAAAGAGCCGGCTCCTAG...TTGACTCCCTGACTTCAAGCCAGGGTTGTGCCTTACTGTCCCTTTTCTGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CAA 90 bp | GCTAGGGAGCTTAGAAAGATGGAACCTTGGTCCAGCTTTGGCAGAATGAGGCCCTGTTCCAAGGTGGCATaGGGAGGTGCCCGCAGTCGG | + |
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Preference number: 5 (lower is better) Translates to: ARELRKMEPWSSFGRMRPCSKVA*GGARSR Trigger: CCGACTGCGGGCACCTCCCAATGCCACCTTGGAACA...GGGCCTCATTCTGCCAAAGCTGGACCAAGGTTCCATCTTTCTAAGCTCCCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS GCA 90 bp | CTTGCCGCTGGTCTGGTAGAAATGTTCCAAGGTGGCATTGGGAGGTaGCCGCAGTCGGGTTTTCTCCTTAACATTCAGGAGGGCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LAAGLVEMFQGGIGR*PQSGFLLNIQEGSQ Trigger: CTGGCTGCCCTCCTGAATGTTAAGGAGAAAACCCGACTGCGGGCACCTCCCAATGCCACCTTGGAACATTTCTACCAGACCAGCGGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS GCA 90 bp | CACTCTGCCGTGACAAAAGGTCTACCTCCACCTGCTTGGGCTGCTTaGCGCTGGTCTGGTAGAAATGTTCCAAGGTGGCATTGGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: HSAVTKGLPPPAWAA*RWSGRNVPRWHWEV Trigger: CACCTCCCAATGCCACCTTGGAACATTTCTACCAGACCAGCGGCAAGCAGCCCAAGCAGGTGGAGGTAGACCTTTTGTCACGGCAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS CCA 90 bp | CAGAGAGCCCACTCTGCCGTGACAAAAGGTCTACCTCCACCTGCTTaGGCTGCTTGCCGCTGGTCTGGTAGAAATGTTCCAAGGTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: QRAHSAVTKGLPPPA*AACRWSGRNVPRWH Trigger: ATGCCACCTTGGAACATTTCTACCAGACCAGCGGCAAGCAGCCCAAGCAGGTGGAGGTAGACCTTTTGTCACGGCAGAGTGGGCTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS GCA 90 bp | CAGCAGGTAGTCAGAAGCGTCATGCAGAGCCATGATGAGGGTCCCTaGCCGGACGTAATTGGCAAACCAGGAGAAGCAGAGGAGAATGAT | + |
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Preference number: 5 (lower is better) Translates to: QQVVRSVMQSHDEGP*PDVIGKPGEAEEND Trigger: ATCATTCTCCTCTGCTTCTCCTGGTTTGCCAATTACGTCCGGGCAGGGACCCTCATCATGGCTCTGCATGACGCTTCTGACTACCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CAA 90 bp | GTCTCTCAACAGGATGTGGATGTGGCCAAGCCTCCTTTCTACCTGGAGATAGGCGCTTCTCGGAACTTTTaGAGAAGACTGGGCCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: VSQQDVDVAKPPFYLEIGASRNF*RRLGLS Trigger: GGACAGGCCCAGTCTTCTCAAAAAGTTCCGAGAAGC...GCCTATCTCCAGGTAGAAAGGAGGCTTGGCCACATCCACATCCTGTTGAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CAA 90 bp | TCAGGGAGTCAAAGGCAAACAGCTAGCTCCAAATTCTTAGGAATGAGGAATGTGTCTACCTCCACCTGCTaGGGCTGCTTGCCGCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: SGSQRQTASSKFLGMRNVSTSTC*GCLPLV Trigger: GACCAGCGGCAAGCAGCCCAAGCAGGTGGAGGTAGA...CACATTCCTCATTCCTAAGAATTTGGAGCTAGCTGTTTGCCTTTGACTCCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CAA 90 bp | CATTTTGGTCTGAAATGGTCCCTCGCCGAAATATCAGGTCCTACCTGTAGTTGTGGGCAGCCAGGGGTGTaGCCACATAAAGCTCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: HFGLKWSLAEISGPTCSCGQPGV*PHKAQR Trigger: TCTTTGAGCTTTATGTGGCAACACCCCTGGCTGCCC...ACAACTACAGGTAGGACCTGATATTTCGGCGAGGGACCATTTCAGACCAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CAA 90 bp | GCTAGGGAGCTTAGAAAGATGGAACCTTGGTCCAGCTTTGGCAGAATGAGGCCCTTTCCAGTTATGAACTaGTGGGCCATACGCAGAATG | + |
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Preference number: 5 (lower is better) Translates to: ARELRKMEPWSSFGRMRPFPVMN*WAIRRM Trigger: CATTCTGCGTATGGCCCACAAGTTCATAACTGGAAA...GGGCCTCATTCTGCCAAAGCTGGACCAAGGTTCCATCTTTCTAAGCTCCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS CCA 90 bp | TTGGCAAACCAGGAGAAGCAGAGGAGAATGATAGTGGCCACATGGTaGATGATCTGTTCCTTAAAATCCTTTCGCTTGACATCAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: LANQEKQRRMIVATW*MICSLKSFRLTSEA Trigger: TGCCTCTGATGTCAAGCGAAAGGATTTTAAGGAACAGATCATCCACCATGTGGCCACTATCATTCTCCTCTGCTTCTCCTGGTTTGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015858.12 ENSMUST00000139866.2 |
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| CDS-3UTR CAA 90 bp | CACAACCCTGGCTTGAAGTCAGGGAGTCAAAGGCAAACAGCTAGCTCCAAATTCAACACAATGAAGAGGTaGTTGCAGGTGTTCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: HNPGLKSGSQRQTASSKFNTMKR*LQVFFH Trigger: ATGGAAGAACACCTGCAACAACCTCTTCATTGTGTT...GAATTTGGAGCTAGCTGTTTGCCTTTGACTCCCTGACTTCAAGCCAGGGTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CAA 90 bp | AGAAGGATTAGCAAGAAGGGTAGCTTAGAAGGTAGAGAGGGAAATGAGACTATGACAATGAAGAGGTTGTaGCAGGTGTTCTTCCATCCC | + |
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Preference number: 5 (lower is better) Translates to: RRISKKGSLEGREGNETMTMKRL*QVFFHP Trigger: GGGATGGAAGAACACCTGCAACAACCTCTTCATTGT...CATAGTCTCATTTCCCTCTCTACCTTCTAAGCTACCCTTCTTGCTAATCCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS-3UTR CAA 90 bp | AGAAGGATTAGCAAGAAGGGTAGCTTAGAAGGTAGAGAGGGAAATGAGACTATGTTAAAATCCTTTCGCTaGACATCAGAGGCAATGCTG | + |
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Preference number: 5 (lower is better) Translates to: RRISKKGSLEGREGNETMLKSFR*TSEAML Trigger: CAGCATTGCCTCTGATGTCAAGCGAAAGGATTTTAA...CATAGTCTCATTTCCCTCTCTACCTTCTAAGCTACCCTTCTTGCTAATCCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015858.12 |
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| CDS CCA 72 bp | TCCTGGTTGCGGCGGCGGCGGAACCAGCGTTCTACCTaGCGTCCAGAGAGCCCACTCTGCCGTGACAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: SWLRRRRNQRST*RPESPLCRDKR Trigger: CCTTTTGTCACGGCAGAGTGGGCTCTCTGGACGCCAGGTAGAACGCTGGTTCCGCCGCCGCCGCAACCAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS CAA 90 bp | CAGCTGGCTTCTCGGAACTTTTTGAGAAGACTGGGCCTGTCCTGGTaGCGGCGGCGGCGGAACCAGCGTTCTACCTGGCGTCCAGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: QLASRNFLRRLGLSW*RRRRNQRSTWRPES Trigger: GCTCTCTGGACGCCAGGTAGAACGCTGGTTCCGCCGCCGCCGCAACCAGGACAGGCCCAGTCTTCTCAAAAAGTTCCGAGAAGCCAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139866.2 |
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| CDS CCA 72 bp | GCTTCTCGGAACTTTTTGAGAAGACTGGGCCTGTCCTaGTTGCGGCGGCGGCGGAACCAGCGTTCTACCTGG | + |
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Preference number: 6 (lower is better) Translates to: ASRNFLRRLGLS*LRRRRNQRSTW Trigger: CCAGGTAGAACGCTGGTTCCGCCGCCGCCGCAACCAGGACAGGCCCAGTCTTCTCAAAAAGTTCCGAGAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139866.2 |
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| CDS TCA 72 bp | GCGTTCTACCTGGCGTCCAGAGAGCCCACTCTGCCGTaGCAAAAGGTCTACCTCCACCTGCTTGGGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: AFYLASREPTLP*QKVYLHLLGLL Trigger: AAGCAGCCCAAGCAGGTGGAGGTAGACCTTTTGTCACGGCAGAGTGGGCTCTCTGGACGCCAGGTAGAACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS GCA 72 bp | AACCAGCGTTCTACCTGGCGTCCAGAGAGCCCACTCTaGCGTGACAAAAGGTCTACCTCCACCTGCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: NQRSTWRPESPL*RDKRSTSTCLG Trigger: GCCCAAGCAGGTGGAGGTAGACCTTTTGTCACGGCAGAGTGGGCTCTCTGGACGCCAGGTAGAACGCTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS CCA 72 bp | GCTGCTTGCCGCTGGTCTGGTAGAAATGTTCCAAGGTaGCATTGGGAGGTGCCCGCAGTCGGGTTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: AACRWSGRNVPR*HWEVPAVGFSP Trigger: AGGAGAAAACCCGACTGCGGGCACCTCCCAATGCCACCTTGGAACATTTCTACCAGACCAGCGGCAAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS GCA 72 bp | GTCAGAAGCGTCATGCAGAGCCATGATGAGGGTCCCTaGCCGGACGTAATTGGCAAACCAGGAGAAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: VRSVMQSHDEGP*PDVIGKPGEAE Trigger: CTCTGCTTCTCCTGGTTTGCCAATTACGTCCGGGCAGGGACCCTCATCATGGCTCTGCATGACGCTTCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015858.12 ENSMUST00000139866.2 |
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| CDS CCA 72 bp | AAAGGTCTACCTCCACCTGCTTGGGCTGCTTGCCGCTaGTCTGGTAGAAATGTTCCAAGGTGGCATTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: KGLPPPAWAACR*SGRNVPRWHWE Trigger: CTCCCAATGCCACCTTGGAACATTTCTACCAGACCAGCGGCAAGCAGCCCAAGCAGGTGGAGGTAGACCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS CCA 72 bp | CACTCTGCCGTGACAAAAGGTCTACCTCCACCTGCTTaGGCTGCTTGCCGCTGGTCTGGTAGAAATGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: HSAVTKGLPPPA*AACRWSGRNVP Trigger: TGGAACATTTCTACCAGACCAGCGGCAAGCAGCCCAAGCAGGTGGAGGTAGACCTTTTGTCACGGCAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS GCA 72 bp | GTGACAAAAGGTCTACCTCCACCTGCTTGGGCTGCTTaGCGCTGGTCTGGTAGAAATGTTCCAAGGTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: VTKGLPPPAWAA*RWSGRNVPRWH Trigger: ATGCCACCTTGGAACATTTCTACCAGACCAGCGGCAAGCAGCCCAAGCAGGTGGAGGTAGACCTTTTGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS GCA 72 bp | GGTCTGGTAGAAATGTTCCAAGGTGGCATTGGGAGGTaGCCGCAGTCGGGTTTTCTCCTTAACATTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GLVEMFQGGIGR*PQSGFLLNIQE Trigger: CTCCTGAATGTTAAGGAGAAAACCCGACTGCGGGCACCTCCCAATGCCACCTTGGAACATTTCTACCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS TCA 72 bp | AAAGAGCAGGGCCAGGGGGAGTGTGATGTAGAGATCTaGGGCTTTGGCATAGACACGTCCATCTTTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KEQGQGECDVEI*GFGIDTSIFVF Trigger: GAAGACAAAGATGGACGTGTCTATGCCAAAGCCTCAGATCTCTACATCACACTCCCCCTGGCCCTGCTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015858.12 ENSMUST00000129267.8 ENSMUST00000139498.8 ENSMUST00000139866.2 |
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| CDS CCA 72 bp | CAGGAGAAGCAGAGGAGAATGATAGTGGCCACATGGTaGATGATCTGTTCCTTAAAATCCTTTCGCTTGACA | + |
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Preference number: 6 (lower is better) Translates to: QEKQRRMIVATW*MICSLKSFRLT Trigger: TGTCAAGCGAAAGGATTTTAAGGAACAGATCATCCACCATGTGGCCACTATCATTCTCCTCTGCTTCTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015858.12 ENSMUST00000139866.2 |
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| CDS CCA 72 bp | AACCAGGAGAAGCAGAGGAGAATGATAGTGGCCACATaGTGGATGATCTGTTCCTTAAAATCCTTTCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: NQEKQRRMIVAT*WMICSLKSFRL Trigger: CAAGCGAAAGGATTTTAAGGAACAGATCATCCACCATGTGGCCACTATCATTCTCCTCTGCTTCTCCTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015858.12 ENSMUST00000139866.2 |
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