Pregenerated sensors for CERS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000087408Ensembl transcript IDs: ENSMUST00000140239.4, ENSMUST00000165819.9
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGGGCTCCGTGTGGCGCCGCAATCGCGGCAAGGGACACAGGCGTaGGTCCAGCGTCACCAGCAGCAGGGAGGCCTCAGCCAGGCGCCC | + |
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Preference number: 1 (lower is better) Translates to: PGLRVAPQSRQGTQA*VQRHQQQGGLSQAP Trigger: GGGCGCCTGGCTGAGGCCTCCCTGCTGCTGGTGACGCTGGACCCACGCCTGTGTCCCTTGCCGCGATTGCGGCGCCACACGGAGCCCAGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | CCCGGGGTGGGAGCAGCTGCGTGCATGAGCGCGCGCAGCACAGCGTaGTTGAGTGCAGGCGGCCCGCCGGGTCCCCTCAGCGTTTCGGGT | + |
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Preference number: 1 (lower is better) Translates to: PGVGAAACMSARSTA*LSAGGPPGPLSVSG Trigger: ACCCGAAACGCTGAGGGGACCCGGCGGGCCGCCTGCACTCAACCACGCTGTGCTGCGCGCGCTCATGCACGCAGCTGCTCCCACCCCGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR GCA 90 bp | GGGAAGCCCAAGAACCTGGAGCAGGGCGGCAGCGGGGCCCATGGATaGTGGCGCGGGGGCCAGGGTCGTCGAGGGCAGCAAGAGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: GKPKNLEQGGSGAHG*WRGGQGRRGQQEQE Trigger: CTCCTGCTCTTGCTGCCCTCGACGACCCTGGCCCCCGCGCCAGCATCCATGGGCCCCGCTGCCGCCCTGCTCCAGGTTCTTGGGCTTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | AAGCCCAAGAACCTGGAGCAGGGCGGCAGCGGGGCCCATGGATGCTaGCGCGGGGGCCAGGGTCGTCGAGGGCAGCAAGAGCAGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: KPKNLEQGGSGAHGC*RGGQGRRGQQEQEE Trigger: CTCCTCCTGCTCTTGCTGCCCTCGACGACCCTGGCCCCCGCGCCAGCATCCATGGGCCCCGCTGCCGCCCTGCTCCAGGTTCTTGGGCTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | TCACCAGCAGCAGGGAGGCCTCAGCCAGGCGCCCACAGGCTGCAGTaGCCCCAGGGTGCAGTGACAGCGCCAGGCGCACAGTACAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: SPAAGRPQPGAHRLQ*PQGAVTAPGAQYRA Trigger: TGCCCTGTACTGTGCGCCTGGCGCTGTCACTGCACCCTGGGGCCACTGCAGCCTGTGGGCGCCTGGCTGAGGCCTCCCTGCTGCTGGTGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | GGCCCGCCGGGTCCCCTCAGCGTTTCGGGTAGTGCGCACGTGCCCTaGCAGAAGTTGGCTAGGAAGCCACGCGGCGCGATCACCCAACGG | + |
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Preference number: 1 (lower is better) Translates to: GPPGPLSVSGSAHVP*QKLARKPRGAITQR Trigger: CCGTTGGGTGATCGCGCCGCGTGGCTTCCTAGCCAACTTCTGCCAGGGCACGTGCGCACTACCCGAAACGCTGAGGGGACCCGGCGGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | TCCTCCACGTGGCATGGCCGCAGAGGGCGTCCCACTCTGGCCTCCTaGGGGTCGCGGCGACGGAATAGGCGCCACATGACAGGAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: SSTWHGRRGRPTLAS*GSRRRNRRHMTGGT Trigger: TGTGCCTCCTGTCATGTGGCGCCTATTCCGTCGCCGCGACCCCCAGGAGGCCAGAGTGGGACGCCCTCTGCGGCCATGCCACGTGGAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | AAGGCGGGACCGGGCCTCCAGGGGTGGGAGCAGACCTCCAGGGACTaGGTCGAGTCTCCAGGGGCGGAGTCAGTATCCCAGGTAGGATGG | + |
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Preference number: 1 (lower is better) Translates to: KAGPGLQGWEQTSRD*VESPGAESVSQVGW Trigger: CCATCCTACCTGGGATACTGACTCCGCCCCTGGAGACTCGACCCAGTCCCTGGAGGTCTGCTCCCACCCCTGGAGGCCCGGTCCCGCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | GGGATGTGGCGCACAATGTTTCCGGCGACCCCTAGTTCCTCCACGTaGCATGGCCGCAGAGGGCGTCCCACTCTGGCCTCCTGGGGGTCG | + |
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Preference number: 1 (lower is better) Translates to: GMWRTMFPATPSSST*HGRRGRPTLASWGS Trigger: CGACCCCCAGGAGGCCAGAGTGGGACGCCCTCTGCGGCCATGCCACGTGGAGGAACTAGGGGTCGCCGGAAACATTGTGCGCCACATCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | GGTGCAGTGACAGCGCCAGGCGCACAGTACAGGGCACTGATGCGTTaGCGGCTACTGCAGTCCCCAGTAGGTCTGCGCGCAGGAGCACCC | + |
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Preference number: 1 (lower is better) Translates to: GAVTAPGAQYRALMR*RLLQSPVGLRAGAP Trigger: GGGTGCTCCTGCGCGCAGACCTACTGGGGACTGCAGTAGCCGCCAACGCATCAGTGCCCTGTACTGTGCGCCTGGCGCTGTCACTGCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | GTCCCCTCAGCGTTTCGGGTAGTGCGCACGTGCCCTGGCAGAAGTTaGCTAGGAAGCCACGCGGCGCGATCACCCAACGGTGCCAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: VPSAFRVVRTCPGRS*LGSHAARSPNGASP Trigger: TGGGCTGGCACCGTTGGGTGATCGCGCCGCGTGGCTTCCTAGCCAACTTCTGCCAGGGCACGTGCGCACTACCCGAAACGCTGAGGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | CTGGCGGGTTGTGCGGGCCTGGAGGACAGACCGCTGTCGGGGATGTaGCGCACAATGTTTCCGGCGACCCCTAGTTCCTCCACGTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: LAGCAGLEDRPLSGM*RTMFPATPSSSTWH Trigger: ATGCCACGTGGAGGAACTAGGGGTCGCCGGAAACATTGTGCGCCACATCCCCGACAGCGGTCTGTCCTCCAGGCCCGCACAACCCGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR TCA 90 bp | GGCGGAGCTGCTGGCAGCCAGAGTCCCTGGAGAAGGGTAGCATCCTaGATCTTAGGGCGGGGCTATTGTCCTAGGGGCGAGGCCATGCCG | + |
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Preference number: 1 (lower is better) Translates to: GGAAGSQSPWRRVAS*ILGRGYCPRGEAMP Trigger: CGGCATGGCCTCGCCCCTAGGACAATAGCCCCGCCCTAAGATTCAGGATGCTACCCTTCTCCAGGGACTCTGGCTGCCAGCAGCTCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | CAGCCTCCAGCCGCAACTCTAAGCGCGCGCGTGTTGGGCGCTCTGTaGGCTCCACATTCGACAGGTCAAAGACGACTGTCCACTCGGGGC | + |
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Preference number: 1 (lower is better) Translates to: QPPAATLSARVLGAL*APHSTGQRRLSTRG Trigger: GCCCCGAGTGGACAGTCGTCTTTGACCTGTCGAATGTGGAGCCCACAGAGCGCCCAACACGCGCGCGCTTAGAGTTGCGGCTGGAGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR GCA 90 bp | AGCCCACCTCACGGAAGCTCACATGCAACCGTCGGGTACGACAAGTaGCCACTGGACCAACTTCTACCCTGGGCTCCGTGTGGCGCCGCA | + |
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Preference number: 1 (lower is better) Translates to: SPPHGSSHATVGYDK*PLDQLLPWAPCGAA Trigger: TGCGGCGCCACACGGAGCCCAGGGTAGAAGTTGGTCCAGTGGGCACTTGTCGTACCCGACGGTTGCATGTGAGCTTCCGTGAGGTGGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR GCA 90 bp | TGGCAGAAGTTGGCTAGGAAGCCACGCGGCGCGATCACCCAACGGTaGCAGCCCACCTCACGGAAGCTCACATGCAACCGTCGGGTACGA | + |
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Preference number: 1 (lower is better) Translates to: WQKLARKPRGAITQR*QPTSRKLTCNRRVR Trigger: TCGTACCCGACGGTTGCATGTGAGCTTCCGTGAGGTGGGCTGGCACCGTTGGGTGATCGCGCCGCGTGGCTTCCTAGCCAACTTCTGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR TCA 90 bp | AGAGGGCAGGACTGGGCGGCAGTCCCAAGGTGGGTGGTCGAGAATTaGTCTGAAAGGCGGAGCTGCTGGCAGCCAGAGTCCCTGGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: RGQDWAAVPRWVVEN*SERRSCWQPESLEK Trigger: CTTCTCCAGGGACTCTGGCTGCCAGCAGCTCCGCCTTTCAGATCAATTCTCGACCACCCACCTTGGGACTGCCGCCCAGTCCTGCCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | CCCACTGATCCAGAGGGCAGGACTGGGCGGCAGTCCCAAGGTGGGTaGTCGAGAATTGATCTGAAAGGCGGAGCTGCTGGCAGCCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: PTDPEGRTGRQSQGG*SRIDLKGGAAGSQS Trigger: ACTCTGGCTGCCAGCAGCTCCGCCTTTCAGATCAATTCTCGACCACCCACCTTGGGACTGCCGCCCAGTCCTGCCCTCTGGATCAGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 90 bp | GTCGCAGGACCACGTTGTCACTATTGTCGAAGAAGAGCACGGAGATaGGTGATAGACGCTCTGGCACGCAGCAGGGCGAGCCTGCACCCG | + |
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Preference number: 1 (lower is better) Translates to: VAGPRCHYCRRRARR*VIDALARSRASLHP Trigger: CGGGTGCAGGCTCGCCCTGCTGCGTGCCAGAGCGTCTATCACCCATCTCCGTGCTCTTCTTCGACAATAGTGACAACGTGGTCCTGCGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CAA 90 bp | GGGGTGGGAGCAGCTGCGTGCATGAGCGCGCGCAGCACAGCGTGGTaGAGTGCAGGCGGCCCGCCGGGTCCCCTCAGCGTTTCGGGTAGT | + |
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Preference number: 2 (lower is better) Translates to: GVGAAACMSARSTAW*SAGGPPGPLSVSGS Trigger: ACTACCCGAAACGCTGAGGGGACCCGGCGGGCCGCCTGCACTCAACCACGCTGTGCTGCGCGCGCTCATGCACGCAGCTGCTCCCACCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | GCACCCGGGGTGGGAGCAGCTGCGTGCATGAGCGCGCGCAGCACAGCGTGGTTGCGGGTTGTGCGGGCCTaGAGGACAGACCGCTGTCGG | + |
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Preference number: 2 (lower is better) Translates to: APGVGAAACMSARSTAWLRVVRA*RTDRCR Trigger: CCGACAGCGGTCTGTCCTCCAGGCCCGCACAACCCG...CAACCACGCTGTGCTGCGCGCGCTCATGCACGCAGCTGCTCCCACCCCGGGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGGCCTCCTGGGGGTCGCGGCGACGGAATAGGCGCCACATGACAGGAGGCAGGTCGGGGGTGCTTTaGGGTCCTGGAGGGGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: TLASWGSRRRNRRHMTGGRSGVL*GPGGGV Trigger: CACGCCCCCTCCAGGACCTCAAAGCACCCCCGACCT...GCCTCCTGTCATGTGGCGCCTATTCCGTCGCCGCGACCCCCAGGAGGCCAGAGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | CGCAGCAGCTCAGGCCCTGGATGCTCTGCGTCGGCCCACAGTGCCACGCTTAGCGGAAGCCCAAGAACCTaGAGCAGGGCGGCAGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: RSSSGPGCSASAHSATLSGSPRT*SRAAAG Trigger: CCCCGCTGCCGCCCTGCTCCAGGTTCTTGGGCTTCC...GCTAAGCGTGGCACTGTGGGCCGACGCAGAGCATCCAGGGCCTGAGCTGCTGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CAA 90 bp | GGTCCCCTCAGCGTTTCGGGTAGTGCGCACGTGCCCTGGCAGAAGTaGGCTAGGAAGCCACGCGGCGCGATCACCCAACGGTGCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: GPLSVSGSAHVPWQK*ARKPRGAITQRCQP Trigger: GGGCTGGCACCGTTGGGTGATCGCGCCGCGTGGCTTCCTAGCCAACTTCTGCCAGGGCACGTGCGCACTACCCGAAACGCTGAGGGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCTCCTGGGGGTCGCGGCGACGGAATAGGCGCCACATGACAGGAGGCACAGTGTCTGGACCCCACTaGTCCAGAGGGCAGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: LASWGSRRRNRRHMTGGTVSGPH*SRGQDW Trigger: CCAGTCCTGCCCTCTGGATCAGTGGGGTCCAGACAC...TGTGCCTCCTGTCATGTGGCGCCTATTCCGTCGCCGCGACCCCCAGGAGGCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | CGCAGCAGCTCAGGCCCTGGATGCTCTGCGTCGGCCCACAGTGCCACGCTTAGCTGGAGGGGGCGTGTCTaGACCCCACTGATCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RSSSGPGCSASAHSATLSWRGRV*TPLIQR Trigger: CCTCTGGATCAGTGGGGTCCAGACACGCCCCCTCCA...GCTAAGCGTGGCACTGTGGGCCGACGCAGAGCATCCAGGGCCTGAGCTGCTGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGTCGGTGTGTGGGGACGCTCCGGGGCGCTTCGGGAAGCCCAAGAACCTGGAGGTGCTTTGAGGTCCTaGAGGGGGCGTGTCTGGACC | + |
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Preference number: 2 (lower is better) Translates to: QVGVWGRSGALREAQEPGGALRS*RGRVWT Trigger: GGTCCAGACACGCCCCCTCCAGGACCTCAAAGCACC...TCCAGGTTCTTGGGCTTCCCGAAGCGCCCCGGAGCGTCCCCACACACCGACCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | CGCAGCAGCTCAGGCCCTGGATGCTCTGCGTCGGCCCACAGTGCCACGCTTAGCTGCGTCTGGGGCCAGTaGGCTGGTGACCTTAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: RSSSGPGCSASAHSATLSCVWGQ*AGDLRS Trigger: CGACCTAAGGTCACCAGCCCACTGGCCCCAGACGCA...GCTAAGCGTGGCACTGTGGGCCGACGCAGAGCATCCAGGGCCTGAGCTGCTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR GCA 90 bp | CGGAAGCTCACATGCAACCGTCGGGTACGACAAGTGCCCACTGGACCAACTTCTCAGGCGCCCACAGGCTaGAGTGGCCCCAGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: RKLTCNRRVRQVPTGPTSQAPTG*SGPRVQ Trigger: CTGCACCCTGGGGCCACTGCAGCCTGTGGGCGCCTG...AGAAGTTGGTCCAGTGGGCACTTGTCGTACCCGACGGTTGCATGTGAGCTTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGGCCTCCTGGGGGTCGCGGCGACGGAATAGGCGCCACATGACAGGAGGCGATGGGATAGAGTCCTaGATGGCTGAAGTTGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: TLASWGSRRRNRRHMTGGDGIES*MAEVED Trigger: GTCCTCAACTTCAGCCATCCAGGACTCTATCCCATC...GCCTCCTGTCATGTGGCGCCTATTCCGTCGCCGCGACCCCCAGGAGGCCAGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | CACCCAACGGTGCCAGCCCACCTCACGGAAGCTCACATGCAACCGTCGGGTACGAGCAGGAGGAGGAGGTaGTCGCAAAAACGATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: HPTVPAHLTEAHMQPSGTSRRRR*SQKRWQ Trigger: CTGCCATCGTTTTTGCGACCACCTCCTCCTCCTGCT...CGTACCCGACGGTTGCATGTGAGCTTCCGTGAGGTGGGCTGGCACCGTTGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | CGGAAGCTCACATGCAACCGTCGGGTACGACAAGTGCCCACTGGACCAACTTCTGCCCACAGGCTGCAGTaGCCCCAGGGTGCAGTGACA | + |
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Preference number: 2 (lower is better) Translates to: RKLTCNRRVRQVPTGPTSAHRLQ*PQGAVT Trigger: TGTCACTGCACCCTGGGGCCACTGCAGCCTGTGGGC...AGAAGTTGGTCCAGTGGGCACTTGTCGTACCCGACGGTTGCATGTGAGCTTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR TCA 90 bp | ACGTTGTCACTATTGTCGAAGAAGAGCACGGAGATGGGTGATAGACGCTCTGGCGGCCCCAGGGTGCAGTaGCAGCGCCAGGCGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: TLSLLSKKSTEMGDRRSGGPRVQ*QRQAHS Trigger: ACTGTGCGCCTGGCGCTGTCACTGCACCCTGGGGCC...GCCAGAGCGTCTATCACCCATCTCCGTGCTCTTCTTCGACAATAGTGACAACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | CACCCAACGGTGCCAGCCCACCTCACGGAAGCTCACATGCAACCGTCGGGTACGGTATCCCAGGTAGGATaGGATAGAGTCCTGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: HPTVPAHLTEAHMQPSGTVSQVG*DRVLDG Trigger: GCCATCCAGGACTCTATCCCATCCTACCTGGGATAC...CGTACCCGACGGTTGCATGTGAGCTTCCGTGAGGTGGGCTGGCACCGTTGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGTGGTCGCAAAAACGATGGCAGACAGGGAGCATTTTCCTCCCAGGAGGTGAAAGGCGGAGCTGCTaGCAGCCAGAGTCCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RRWSQKRWQTGSIFLPGGERRSC*QPESLE Trigger: CTCCAGGGACTCTGGCTGCCAGCAGCTCCGCCTTTC...ACCTCCTGGGAGGAAAATGCTCCCTGTCTGCCATCGTTTTTGCGACCACCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCACATGCAACCGTCGGGTACGACAAGTGCCCACTGGACCAACTTCTACCCCGCTGTCGGGGATGTaGCGCACAATGTTTCCGGCG | + |
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Preference number: 2 (lower is better) Translates to: KLTCNRRVRQVPTGPTSTPLSGM*RTMFPA Trigger: CGCCGGAAACATTGTGCGCCACATCCCCGACAGCGG...GGTAGAAGTTGGTCCAGTGGGCACTTGTCGTACCCGACGGTTGCATGTGAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | AACATGAACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCCAAGGGACACAGGCGTaGGTCCAGCGTCACCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: NMNKQSLLLRGAVPERVSQGTQA*VQRHQQ Trigger: CTGCTGGTGACGCTGGACCCACGCCTGTGTCCCTTG...GGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTTCATGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR GCA 90 bp | ACGTTGTCACTATTGTCGAAGAAGAGCACGGAGATGGGTGATAGACGCTCTGGCTCTGAAAGGCGGAGCTaGTGGCAGCCAGAGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: TLSLLSKKSTEMGDRRSGSERRS*WQPESL Trigger: CAGGGACTCTGGCTGCCAGCAGCTCCGCCTTTCAGA...GCCAGAGCGTCTATCACCCATCTCCGTGCTCTTCTTCGACAATAGTGACAACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR-3UTR CCA 90 bp | TCACTATTGTCGAAGAAGAGCACGGAGATGGGTGATAGACGCTCTGGCACGCAGTGGTCGCAAAAACGATaGCAGACAGGGAGCATTTTC | + |
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Preference number: 2 (lower is better) Translates to: SLLSKKSTEMGDRRSGTQWSQKR*QTGSIF Trigger: GAAAATGCTCCCTGTCTGCCATCGTTTTTGCGACCA...CTGCGTGCCAGAGCGTCTATCACCCATCTCCGTGCTCTTCTTCGACAATAGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 72 bp | AACCTGGAGCAGGGCGGCAGCGGGGCCCATGGATGCTaGCGCGGGGGCCAGGGTCGTCGAGGGCAGCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: NLEQGGSGAHGC*RGGQGRRGQQE Trigger: CTCTTGCTGCCCTCGACGACCCTGGCCCCCGCGCCAGCATCCATGGGCCCCGCTGCCGCCCTGCTCCAGGTT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 72 bp | GGGACGCTCCGGGGCGCTTCGGGAAGCCCAAGAACCTaGAGCAGGGCGGCAGCGGGGCCCATGGATGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: GTLRGASGSPRT*SRAAAGPMDAG Trigger: GCCAGCATCCATGGGCCCCGCTGCCGCCCTGCTCCAGGTTCTTGGGCTTCCCGAAGCGCCCCGGAGCGTCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 72 bp | GGAGCAGCTGCGTGCATGAGCGCGCGCAGCACAGCGTaGTTGAGTGCAGGCGGCCCGCCGGGTCCCCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: GAAACMSARSTA*LSAGGPPGPLS Trigger: GCTGAGGGGACCCGGCGGGCCGCCTGCACTCAACCACGCTGTGCTGCGCGCGCTCATGCACGCAGCTGCTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR GCA 72 bp | TGCGTGCATGAGCGCGCGCAGCACAGCGTGGTTGAGTaGAGGCGGCCCGCCGGGTCCCCTCAGCGTTTCGGG | + |
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Preference number: 3 (lower is better) Translates to: CVHERAQHSVVE*RRPAGSPQRFG Trigger: CCCGAAACGCTGAGGGGACCCGGCGGGCCGCCTGCACTCAACCACGCTGTGCTGCGCGCGCTCATGCACGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR TCA 72 bp | CCTCCTGGGGGTCGCGGCGACGGAATAGGCGCCACATaGCAGGAGGCACAGGTCGGTGTGTGGGGACGCTCC | + |
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Preference number: 3 (lower is better) Translates to: PPGGRGDGIGAT*QEAQVGVWGRS Trigger: GGAGCGTCCCCACACACCGACCTGTGCCTCCTGTCATGTGGCGCCTATTCCGTCGCCGCGACCCCCAGGAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR GCA 72 bp | CGCCGGGTCCCCTCAGCGTTTCGGGTAGTGCGCACGTaGCCTGGCAGAAGTTGGCTAGGAAGCCACGCGGCG | + |
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Preference number: 3 (lower is better) Translates to: RRVPSAFRVVRT*PGRSWLGSHAA Trigger: CGCCGCGTGGCTTCCTAGCCAACTTCTGCCAGGGCACGTGCGCACTACCCGAAACGCTGAGGGGACCCGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 72 bp | CCGGGCCTCCAGGGGTGGGAGCAGACCTCCAGGGACTaGGTCGAGTCTCCAGGGGCGGAGTCAGTATCCCAG | + |
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Preference number: 3 (lower is better) Translates to: PGLQGWEQTSRD*VESPGAESVSQ Trigger: CTGGGATACTGACTCCGCCCCTGGAGACTCGACCCAGTCCCTGGAGGTCTGCTCCCACCCCTGGAGGCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 72 bp | GAGGTGTCCAAGAGAGTCAGCGGAGCCCACTGCGTCTaGGGCCAGTGGGCTGGTGACCTTAGGTCGGGGGTG | + |
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Preference number: 3 (lower is better) Translates to: EVSKRVSGAHCV*GQWAGDLRSGV Trigger: CACCCCCGACCTAAGGTCACCAGCCCACTGGCCCCAGACGCAGTGGGCTCCGCTGACTCTCTTGGACACCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| 3UTR CCA 72 bp | CGCACAATGTTTCCGGCGACCCCTAGTTCCTCCACGTaGCATGGCCGCAGAGGGCGTCCCACTCTGGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RTMFPATPSSST*HGRRGRPTLAS Trigger: GGAGGCCAGAGTGGGACGCCCTCTGCGGCCATGCCACGTGGAGGAACTAGGGGTCGCCGGAAACATTGTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR CCA 72 bp | GGTCCCCTCAGCGTTTCGGGTAGTGCGCACGTGCCCTaGCAGAAGTTGGCTAGGAAGCCACGCGGCGCGATC | + |
|
Preference number: 3 (lower is better) Translates to: GPLSVSGSAHVP*QKLARKPRGAI Trigger: GATCGCGCCGCGTGGCTTCCTAGCCAACTTCTGCCAGGGCACGTGCGCACTACCCGAAACGCTGAGGGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR GCA 72 bp | TCCCAGGAGGTGTCCAAGAGAGTCAGCGGAGCCCACTaGGTCTGGGGCCAGTGGGCTGGTGACCTTAGGTCG | + |
|
Preference number: 3 (lower is better) Translates to: SQEVSKRVSGAH*VWGQWAGDLRS Trigger: CGACCTAAGGTCACCAGCCCACTGGCCCCAGACGCAGTGGGCTCCGCTGACTCTCTTGGACACCTCCTGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR CCA 72 bp | TGTGCGGGCCTGGAGGACAGACCGCTGTCGGGGATGTaGCGCACAATGTTTCCGGCGACCCCTAGTTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CAGLEDRPLSGM*RTMFPATPSSS Trigger: GGAGGAACTAGGGGTCGCCGGAAACATTGTGCGCCACATCCCCGACAGCGGTCTGTCCTCCAGGCCCGCACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR CCA 72 bp | ACAGCGCCAGGCGCACAGTACAGGGCACTGATGCGTTaGCGGCTACTGCAGTCCCCAGTAGGTCTGCGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: TAPGAQYRALMR*RLLQSPVGLRA Trigger: TGCGCGCAGACCTACTGGGGACTGCAGTAGCCGCCAACGCATCAGTGCCCTGTACTGTGCGCCTGGCGCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR CCA 72 bp | GGGTACGACAAGTGCCCACTGGACCAACTTCTACCCTaGGCTCCGTGTGGCGCCGCAATCGCGGCAAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GYDKCPLDQLLP*APCGAAIAARD Trigger: GTCCCTTGCCGCGATTGCGGCGCCACACGGAGCCCAGGGTAGAAGTTGGTCCAGTGGGCACTTGTCGTACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR CCA 72 bp | GCGTTTCGGGTAGTGCGCACGTGCCCTGGCAGAAGTTaGCTAGGAAGCCACGCGGCGCGATCACCCAACGGT | + |
|
Preference number: 3 (lower is better) Translates to: AFRVVRTCPGRS*LGSHAARSPNG Trigger: ACCGTTGGGTGATCGCGCCGCGTGGCTTCCTAGCCAACTTCTGCCAGGGCACGTGCGCACTACCCGAAACGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR CCA 72 bp | CCAGAGGGCAGGACTGGGCGGCAGTCCCAAGGTGGGTaGTCGAGAATTGATCTGAAAGGCGGAGCTGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PEGRTGRQSQGG*SRIDLKGGAAG Trigger: GCCAGCAGCTCCGCCTTTCAGATCAATTCTCGACCACCCACCTTGGGACTGCCGCCCAGTCCTGCCCTCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR TCA 72 bp | GGCGGCAGTCCCAAGGTGGGTGGTCGAGAATTGATCTaGAAGGCGGAGCTGCTGGCAGCCAGAGTCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GGSPKVGGRELI*KAELLAARVPG Trigger: TCCAGGGACTCTGGCTGCCAGCAGCTCCGCCTTTCAGATCAATTCTCGACCACCCACCTTGGGACTGCCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR TCA 72 bp | GACTGGGCGGCAGTCCCAAGGTGGGTGGTCGAGAATTaGTCTGAAAGGCGGAGCTGCTGGCAGCCAGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: DWAAVPRWVVEN*SERRSCWQPES Trigger: GGACTCTGGCTGCCAGCAGCTCCGCCTTTCAGATCAATTCTCGACCACCCACCTTGGGACTGCCGCCCAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR TCA 72 bp | GAACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTaGAAGGGTGTCCCGGGTGGTCAACGGCAGCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: EQTVPAFAWGGP*KGVPGGQRQPH Trigger: GTGTGGCTGCCGTTGACCACCCGGGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR CCA 72 bp | GCCGCAACTCTAAGCGCGCGCGTGTTGGGCGCTCTGTaGGCTCCACATTCGACAGGTCAAAGACGACTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: AATLSARVLGAL*APHSTGQRRLS Trigger: GGACAGTCGTCTTTGACCTGTCGAATGTGGAGCCCACAGAGCGCCCAACACGCGCGCGCTTAGAGTTGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR CCA 72 bp | TTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCCGGGTaGTCAACGGCAGCCACACTCATCCACCACCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: FCVGRSLKGCPG*STAATLIHHHV Trigger: GACATGGTGGTGGATGAGTGTGGCTGCCGTTGACCACCCGGGACACCCTTTCAGGGACCGCCCCACGCAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR TCA 72 bp | GCTGGCAGCCAGAGTCCCTGGAGAAGGGTAGCATCCTaGATCTTAGGGCGGGGCTATTGTCCTAGGGGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: AGSQSPWRRVAS*ILGRGYCPRGE Trigger: CTCGCCCCTAGGACAATAGCCCCGCCCTAAGATTCAGGATGCTACCCTTCTCCAGGGACTCTGGCTGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR CCA 72 bp | CCACGTTGTCACTATTGTCGAAGAAGAGCACGGAGATaGGTGATAGACGCTCTGGCACGCAGCAGGGCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PRCHYCRRRARR*VIDALARSRAS Trigger: GCTCGCCCTGCTGCGTGCCAGAGCGTCTATCACCCATCTCCGTGCTCTTCTTCGACAATAGTGACAACGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR-3UTR CAA 90 bp | AACATGAACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCACCACGTTGTCACTATaGTCGAAGAAGAGCACGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NMNKQSLLLRGAVPERVSTTLSL*SKKSTE Trigger: CTCCGTGCTCTTCTTCGACAATAGTGACAACGTGGT...GGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTTCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| 3UTR CAA 72 bp | GCAGCTGCGTGCATGAGCGCGCGCAGCACAGCGTGGTaGAGTGCAGGCGGCCCGCCGGGTCCCCTCAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: AAACMSARSTAW*SAGGPPGPLSV Trigger: AACGCTGAGGGGACCCGGCGGGCCGCCTGCACTCAACCACGCTGTGCTGCGCGCGCTCATGCACGCAGCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR CCA 90 bp | GCACCCGGGGTGGGAGCAGCTGCGTGCATGAGCGCGCGCAGCACAGCGTGGTTGACTCGGCATGGGCTCTaGCGCCTCGAGCCTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: APGVGAAACMSARSTAWLTRHGL*RLEPGG Trigger: ACCCCCAGGCTCGAGGCGCCAGAGCCCATGCCGAGT...CAACCACGCTGTGCTGCGCGCGCTCATGCACGCAGCTGCTCCCACCCCGGGTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR GCA 90 bp | CGCAGCAGCTCAGGCCCTGGATGCTCTGCGTCGGCCCACAGTGCCACGCTTAGCCAGCAGCAGCTCGGGTaGAGCCAGGTGCGCGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSSSGPGCSASAHSATLSQQQLG*SQVRVL Trigger: GAGCACGCGCACCTGGCTGCACCCGAGCTGCTGCTG...GCTAAGCGTGGCACTGTGGGCCGACGCAGAGCATCCAGGGCCTGAGCTGCTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR GCA 90 bp | GCGAGGCCATGCCGCCAAAGGCGGGACCGGGCCTCCAGGGGTGGGAGCAGACCTGCAGCATCTCTAGGCTaGAGACGACACCGCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARPCRQRRDRASRGGSRPAASLG*RRHRLA Trigger: GGCCAAGCGGTGTCGTCTGCAGCCTAGAGATGCTGC...AGGTCTGCTCCCACCCCTGGAGGCCCGGTCCCGCCTTTGGCGGCATGGCCTCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR TCA 90 bp | GTTCCTCCACGTGGCATGGCCGCAGAGGGCGTCCCACTCTGGCCTCCTGGGGGTAGCAGGGTGACCACGTaGTGCACCAGCATGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: VPPRGMAAEGVPLWPPGGSRVTT*CTSMTT Trigger: GGTGGTCATGCTGGTGCATCACGTGGTCACCCTGCT...ACCCCCAGGAGGCCAGAGTGGGACGCCCTCTGCGGCCATGCCACGTGGAGGAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR CCA 90 bp | GCACCCGGGGTGGGAGCAGCTGCGTGCATGAGCGCGCGCAGCACAGCGTGGTTGCAGGCCATTCCTCAGTaGCTTCTCGGCTTTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: APGVGAAACMSARSTAWLQAIPQ*LLGFAG Trigger: CCCTGCAAAGCCGAGAAGCCACTGAGGAATGGCCTG...CAACCACGCTGTGCTGCGCGCGCTCATGCACGCAGCTGCTCCCACCCCGGGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR GCA 90 bp | AACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCCGGGTGCAGGCGCCCACAGGCTaGAGTGGCCCCAGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKQSLLLRGAVPERVSRVQAPTG*SGPRVQ Trigger: CTGCACCCTGGGGCCACTGCAGCCTGTGGGCGCCTG...CACCCGGGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165819.9 |
||
| 3UTR CAA 72 bp | AGCGTTTCGGGTAGTGCGCACGTGCCCTGGCAGAAGTaGGCTAGGAAGCCACGCGGCGCGATCACCCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSGSAHVPWQK*ARKPRGAITQR Trigger: CCGTTGGGTGATCGCGCCGCGTGGCTTCCTAGCCAACTTCTGCCAGGGCACGTGCGCACTACCCGAAACGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR TCA 90 bp | AACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCCGGGTGGAGCAGCTGCGTGCATaGGCGCGCGCAGCACAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NKQSLLLRGAVPERVSRVEQLRA*ARAAQR Trigger: ACGCTGTGCTGCGCGCGCTCATGCACGCAGCTGCTC...CACCCGGGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165819.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGGCCCCAGGGTGCAGTGACAGCGCCAGGCGCACAGTACAGGGCACTGATGGCAGACGACACCGCTTaGCCAGGGGCCGAAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QWPQGAVTAPGAQYRALMADDTA*PGAERC Trigger: ACATCTTTCGGCCCCTGGCCAAGCGGTGTCGTCTGC...CATCAGTGCCCTGTACTGTGCGCCTGGCGCTGTCACTGCACCCTGGGGCCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGCCTCCTGGGGGTCGCGGCGACGGAATAGGCGCCACATGACAGGAGGCGACTGCAGGCTGCAGTaGCAAGTGGCGTACAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: TLASWGSRRRNRRHMTGGDCRLQ*QVAYRT Trigger: GGTTCTGTACGCCACTTGCCACTGCAGCCTGCAGTC...GCCTCCTGTCATGTGGCGCCTATTCCGTCGCCGCGACCCCCAGGAGGCCAGAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR TCA 90 bp | AACATGAACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCGCAGCACAGCGTGGTTaGGTGCAGGCGGCCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NMNKQSLLLRGAVPERVSAAQRG*VQAARR Trigger: CCGGCGGGCCGCCTGCACTCAACCACGCTGTGCTGC...GGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTTCATGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165819.9 |
||
| CDS-3UTR TCA 90 bp | GCTCCACATTCGACAGGTCAAAGACGACTGTCCACTCGGGGCACAGCCCCGAGGCGTGATGCACCAGCATaGCCACCGAGTCCTTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: APHSTGQRRLSTRGTAPRRDAPA*PPSPYA Trigger: GGCGTAAGGACTCGGTGGTCATGCTGGTGCATCACG...CCTCGGGGCTGTGCCCCGAGTGGACAGTCGTCTTTGACCTGTCGAATGTGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR TCA 90 bp | AGCGCGCGCAGCACAGCGTGGTTGAGTGCAGGCGGCCCGCCGGGTCCCCTCAGCGCAACAGCAGAATGTTaGAGAAGAAGTAGTACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SARSTAWLSAGGPPGPLSATAEC*RRSSTE Trigger: TTCCGTACTACTTCTTCTTCAACATTCTGCTGTTGC...GCTGAGGGGACCCGGCGGGCCGCCTGCACTCAACCACGCTGTGCTGCGCGCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR TCA 90 bp | AACATGAACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCGGCCCCAGGGTGCAGTaGCAGCGCCAGGCGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NMNKQSLLLRGAVPERVSGPRVQ*QRQAHS Trigger: ACTGTGCGCCTGGCGCTGTCACTGCACCCTGGGGCC...GGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTTCATGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165819.9 |
||
| CDS-3UTR GCA 90 bp | AACATGAACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCGCAGTGGCCCCAGGGTaGAGTGACAGCGCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NMNKQSLLLRGAVPERVSAVAPG*SDSARR Trigger: GCGCCTGGCGCTGTCACTGCACCCTGGGGCCACTGC...GGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTTCATGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165819.9 |
||
| CDS-3UTR GCA 90 bp | AACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCCGGGTGGCGATCACCCAACGGTaGCAGCCCACCTCACGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NKQSLLLRGAVPERVSRVAITQR*QPTSRK Trigger: CTTCCGTGAGGTGGGCTGGCACCGTTGGGTGATCGC...CACCCGGGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165819.9 |
||
| CDS-3UTR GCA 90 bp | AACATGAACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCCACAGCGTGGTTGAGTaGAGGCGGCCCGCCGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NMNKQSLLLRGAVPERVSHSVVE*RRPAGS Trigger: GGACCCGGCGGGCCGCCTGCACTCAACCACGCTGTG...GGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTTCATGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165819.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCCTCCTGGGGGTCGCGGCGACGGAATAGGCGCCACATGACAGGAGGCACAGACCAGTCAGCACCTTaGCTGCGAAAGCCACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LASWGSRRRNRRHMTGGTDQSAP*LRKPQC Trigger: ACATTGTGGCTTTCGCAGCCAAGGTGCTGACTGGTC...TGTGCCTCCTGTCATGTGGCGCCTATTCCGTCGCCGCGACCCCCAGGAGGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR GCA 90 bp | AACTTCTACCCTGGGCTCCGTGTGGCGCCGCAATCGCGGCAAGGGACACAGGCGAGAAAGGATAACTGGTaGCCAGGAGCAGGTAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NFYPGLRVAPQSRQGTQARKDNW*PGAGKR Trigger: GCGCTTACCTGCTCCTGGGCACCAGTTATCCTTTCT...CGCCTGTGTCCCTTGCCGCGATTGCGGCGCCACACGGAGCCCAGGGTAGAAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR GCA 90 bp | AACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCCGGGTGCGGGTAGTGCGCACGTaGCCTGGCAGAAGTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NKQSLLLRGAVPERVSRVRVVRT*PGRSWL Trigger: TAGCCAACTTCTGCCAGGGCACGTGCGCACTACCCG...CACCCGGGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165819.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGCCTCCTGGGGGTCGCGGCGACGGAATAGGCGCCACATGACAGGAGGCGGAAGAAAGGATAACTaGTGCCCAGGAGCAGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLASWGSRRRNRRHMTGGGRKDN*CPGAGK Trigger: CTTACCTGCTCCTGGGCACCAGTTATCCTTTCTTCC...GCCTCCTGTCATGTGGCGCCTATTCCGTCGCCGCGACCCCCAGGAGGCCAGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR CCA 90 bp | AGACCGCTGTCGGGGATGTGGCGCACAATGTTTCCGGCGACCCCTAGTTCCTCCCGGCTTTGCAGGGCTTaGCTGTCTGAGCTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLSGMWRTMFPATPSSSRLCRA*LSELPE Trigger: CTCTGGAAGCTCAGACAGCCAAGCCCTGCAAAGCCG...GGAGGAACTAGGGGTCGCCGGAAACATTGTGCGCCACATCCCCGACAGCGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR GCA 90 bp | AACATGAACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCGTGGGAGCAGCTGCGTaGATGAGCGCGCGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NMNKQSLLLRGAVPERVSVGAAA*MSARST Trigger: TGTGCTGCGCGCGCTCATGCACGCAGCTGCTCCCAC...GGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTTCATGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165819.9 |
||
| CDS-3UTR CCA 90 bp | GTCTGGACCCCACTGATCCAGAGGGCAGGACTGGGCGGCAGTCCCAAGGTGGGTTGTCCATGTACACGGTaGCATAGATGGAGTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VWTPLIQRAGLGGSPKVGCPCTR*HRWSGS Trigger: ACTGCCACTCCATCTATGCCACCGTGTACATGGACA...ACCCACCTTGGGACTGCCGCCCAGTCCTGCCCTCTGGATCAGTGGGGTCCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR TCA 90 bp | GGGTGCTTTGAGGTCCTGGAGGGGGCGTGTCTGGACCCCACTGATCCAGAGGGCACCAATAGATGTTCATaGCCATCAGGAGCAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCFEVLEGACLDPTDPEGTNRCS*PSGATA Trigger: TGCTGTTGCTCCTGATGGTCATGAACATCTATTGGT...GCCCTCTGGATCAGTGGGGTCCAGACACGCCCCCTCCAGGACCTCAAAGCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR TCA 90 bp | CTCACATGCAACCGTCGGGTACGACAAGTGCCCACTGGACCAACTTCTACCCTGCAGGGCTTGGCTGTCTaGGCTTCCAGAGTGTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LTCNRRVRQVPTGPTSTLQGLAV*ASRVSY Trigger: GTACGACACTCTGGAAGCTCAGACAGCCAAGCCCTG...CAGGGTAGAAGTTGGTCCAGTGGGCACTTGTCGTACCCGACGGTTGCATGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS-3UTR TCA 90 bp | AACATGAACAAACAGTCCCTGCTTTTGCGTGGGGCGGTCCCTGAAAGGGTGTCCGGAATAGGCGCCACATaGCAGGAGGCACAGGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NMNKQSLLLRGAVPERVSGIGAT*QEAQVG Trigger: ACCGACCTGTGCCTCCTGTCATGTGGCGCCTATTCC...GGACACCCTTTCAGGGACCGCCCCACGCAAAAGCAGGGACTGTTTGTTCATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165819.9 |
||
| CDS TCA 90 bp | CAGGCACAGACTGCAGGCTGCAGTGGCAAGTGGCGTACAGAACCTTaGGCGGGAACCAGTAGAGGCGGAACCAGAACCAGCAGAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: QAQTAGCSGKWRTEP*AGTSRGGTRTSRNR Trigger: TCTGTTTCTGCTGGTTCTGGTTCCGCCTCTACTGGTTCCCGCTCAAGGTTCTGTACGCCACTTGCCACTGCAGCCTGCAGTCTGTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS CCA 90 bp | CCACCGAGTCCTTACGCCAGCTGTCCATGTACACGGTGGCATAGATaGAGTGGCAGTAGAAACTCCCCTGCAGCAAATAGGCCACCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PPSPYASCPCTRWHR*SGSRNSPAANRPPR Trigger: TCGCGGTGGCCTATTTGCTGCAGGGGAGTTTCTACTGCCACTCCATCTATGCCACCGTGTACATGGACAGCTGGCGTAAGGACTCGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS CCA 90 bp | CCTTCACCAGGCCATTCCTCAGTGGCTTCTCGGCTTTGCAGGGCTTaGCTGTCTGAGCTTCCAGAGTGTCGTACTCCCTCAAGTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSPGHSSVASRLCRA*LSELPECRTPSSLP Trigger: TGGAAGACTTGAGGGAGTACGACACTCTGGAAGCTCAGACAGCCAAGCCCTGCAAAGCCGAGAAGCCACTGAGGAATGGCCTGGTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS CCA 90 bp | TCCAGTCATAGAAGACAGAGGGCGGGTCATGGAAGAAAGGATAACTaGTGCCCAGGAGCAGGTAAGCGCAGTAGCTCCAACAGGCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSHRRQRAGHGRKDN*CPGAGKRSSSNRPS Trigger: ACTTGGCCTGTTGGAGCTACTGCGCTTACCTGCTCCTGGGCACCAGTTATCCTTTCTTCCATGACCCGCCCTCTGTCTTCTATGACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
||
| CDS TCA 90 bp | GCTTCCAGAGTGTCGTACTCCCTCAAGTCTTCCAGTTCACGCATCTaGCCAGTCAGCACCTTGGCTGCGAAAGCCACAATGTACAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: ASRVSYSLKSSSSRI*PVSTLAAKATMYRN Trigger: GTTCCTGTACATTGTGGCTTTCGCAGCCAAGGTGCTGACTGGTCAGATGCGTGAACTGGAAGACTTGAGGGAGTACGACACTCTGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS GCA 90 bp | AGTCATAGAAGACAGAGGGCGGGTCATGGAAGAAAGGATAACTGGTaGCCAGGAGCAGGTAAGCGCAGTAGCTCCAACAGGCCAAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: SHRRQRAGHGRKDNW*PGAGKRSSSNRPSR Trigger: TCTACTTGGCCTGTTGGAGCTACTGCGCTTACCTGCTCCTGGGCACCAGTTATCCTTTCTTCCATGACCCGCCCTCTGTCTTCTATGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS GCA 90 bp | CCTCAAGTCTTCCAGTTCACGCATCTGACCAGTCAGCACCTTGGCTaGGAAAGCCACAATGTACAGGAACCAATAGATGTTCATGACCAT | + |
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Preference number: 5 (lower is better) Translates to: PQVFQFTHLTSQHLG*ESHNVQEPIDVHDH Trigger: ATGGTCATGAACATCTATTGGTTCCTGTACATTGTGGCTTTCGCAGCCAAGGTGCTGACTGGTCAGATGCGTGAACTGGAAGACTTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS GCA 72 bp | ACGGCCAGCAGCAGCTCGGGTGCAGCCAGGTGCGCGTaGTCCGCCAGGCCGCGGCGCGCCAGTCCCCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: TASSSSGAARCA*SARPRRASPQP Trigger: CGGCTGGGGACTGGCGCGCCGCGGCCTGGCGGAGCACGCGCACCTGGCTGCACCCGAGCTGCTGCTGGCCGT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS CCA 72 bp | TCGTTGCAACATCTGCGCATAACTCGGCATGGGCTCTaGCGCCTCGAGCCTGGGGGTCGCCGCGGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLQHLRITRHGL*RLEPGGRRGSS Trigger: GCTGCTGCCGCGGCGACCCCCAGGCTCGAGGCGCCAGAGCCCATGCCGAGTTATGCGCAGATGTTGCAACGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS CAA 72 bp | GCCCTGAGCCGCCGCCAGCGCCGAGGCCCAGCTTCGTaGCAACATCTGCGCATAACTCGGCATGGGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ALSRRQRRGPAS*QHLRITRHGLW Trigger: CCAGAGCCCATGCCGAGTTATGCGCAGATGTTGCAACGAAGCTGGGCCTCGGCGCTGGCGGCGGCTCAGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS GCA 72 bp | CAGGCGCTCTCAGGTAACCTGGCAGCATCTCTAGGCTaGAGACGACACCGCTTGGCCAGGGGCCGAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: QALSGNLAASLG*RRHRLARGRKM Trigger: CATCTTTCGGCCCCTGGCCAAGCGGTGTCGTCTGCAGCCTAGAGATGCTGCCAGGTTACCTGAGAGCGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS TCA 72 bp | ATAGGCCACCGCGATGTCCCAGGGCACTGCCATGCCTaGCCTCCAGTCATAGAAGACAGAGGGCGGGTCATG | + |
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Preference number: 6 (lower is better) Translates to: IGHRDVPGHCHA*PPVIEDRGRVM Trigger: CATGACCCGCCCTCTGTCTTCTATGACTGGAGGTCAGGCATGGCAGTGCCCTGGGACATCGCGGTGGCCTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS CCA 72 bp | GGCCATTCCTCAGTGGCTTCTCGGCTTTGCAGGGCTTaGCTGTCTGAGCTTCCAGAGTGTCGTACTCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GHSSVASRLCRA*LSELPECRTPS Trigger: TGAGGGAGTACGACACTCTGGAAGCTCAGACAGCCAAGCCCTGCAAAGCCGAGAAGCCACTGAGGAATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS CCA 72 bp | CCACCGAGTCCTTACGCCAGCTGTCCATGTACACGGTaGCATAGATGGAGTGGCAGTAGAAACTCCCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PPSPYASCPCTR*HRWSGSRNSPA Trigger: TGCAGGGGAGTTTCTACTGCCACTCCATCTATGCCACCGTGTACATGGACAGCTGGCGTAAGGACTCGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS CCA 72 bp | AGAAGACAGAGGGCGGGTCATGGAAGAAAGGATAACTaGTGCCCAGGAGCAGGTAAGCGCAGTAGCTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: RRQRAGHGRKDN*CPGAGKRSSSN Trigger: GTTGGAGCTACTGCGCTTACCTGCTCCTGGGCACCAGTTATCCTTTCTTCCATGACCCGCCCTCTGTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS TCA 72 bp | GTGTCGTACTCCCTCAAGTCTTCCAGTTCACGCATCTaGCCAGTCAGCACCTTGGCTGCGAAAGCCACAATG | + |
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Preference number: 6 (lower is better) Translates to: VSYSLKSSSSRI*PVSTLAAKATM Trigger: CATTGTGGCTTTCGCAGCCAAGGTGCTGACTGGTCAGATGCGTGAACTGGAAGACTTGAGGGAGTACGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS CCA 72 bp | CCTTACGCCAGCTGTCCATGTACACGGTGGCATAGATaGAGTGGCAGTAGAAACTCCCCTGCAGCAAATAGG | + |
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Preference number: 6 (lower is better) Translates to: PYASCPCTRWHR*SGSRNSPAANR Trigger: CCTATTTGCTGCAGGGGAGTTTCTACTGCCACTCCATCTATGCCACCGTGTACATGGACAGCTGGCGTAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS CCA 72 bp | AGTCTTCCAGTTCACGCATCTGACCAGTCAGCACCTTaGCTGCGAAAGCCACAATGTACAGGAACCAATAGA | + |
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Preference number: 6 (lower is better) Translates to: SLPVHASDQSAP*LRKPQCTGTNR Trigger: TCTATTGGTTCCTGTACATTGTGGCTTTCGCAGCCAAGGTGCTGACTGGTCAGATGCGTGAACTGGAAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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| CDS GCA 72 bp | TTCCAGTTCACGCATCTGACCAGTCAGCACCTTGGCTaGGAAAGCCACAATGTACAGGAACCAATAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: FQFTHLTSQHLG*ESHNVQEPIDV Trigger: AACATCTATTGGTTCCTGTACATTGTGGCTTTCGCAGCCAAGGTGCTGACTGGTCAGATGCGTGAACTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140239.4 |
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