Pregenerated sensors for CERK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035891Ensembl transcript IDs: ENSMUST00000044332.16, ENSMUST00000156546.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTCTGGAATGCCGGGGGCGAGGGGCCACATTGAGGTGGACAACTaGGCATCGGCCCTCACGCTGCTCCAGGGCTGCCTACCTACTCAC | + |
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Preference number: 1 (lower is better) Translates to: PSGMPGARGHIEVDN*ASALTLLQGCLPTH Trigger: GTGAGTAGGTAGGCAGCCCTGGAGCAGCGTGAGGGCCGATGCTCAGTTGTCCACCTCAATGTGGCCCCTCGCCCCCGGCATTCCAGAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR GCA 90 bp | CGAGCGTGGCTTGCACTGCTAAGCACCGGCAAAGCATCCTCTGACTaGATCTCTCCTCCAGCCCTGGCAGCGGCAGGGGTGGACCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: RAWLALLSTGKASSD*ISPPALAAAGVDQG Trigger: GCCCTGGTCCACCCCTGCCGCTGCCAGGGCTGGAGGAGAGATGCAGTCAGAGGATGCTTTGCCGGTGCTTAGCAGTGCAAGCCACGCTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR TCA 90 bp | ATTCCGAGCGTGGCTTGCACTGCTAAGCACCGGCAAAGCATCCTCTaGCTGCATCTCTCCTCCAGCCCTGGCAGCGGCAGGGGTGGACCA | + |
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Preference number: 1 (lower is better) Translates to: IPSVACTAKHRQSIL*LHLSSSPGSGRGGP Trigger: TGGTCCACCCCTGCCGCTGCCAGGGCTGGAGGAGAGATGCAGTCAGAGGATGCTTTGCCGGTGCTTAGCAGTGCAAGCCACGCTCGGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR CCA 90 bp | GCATCTCTCCTCCAGCCCTGGCAGCGGCAGGGGTGGACCAGGGCGTaGGTATCATGTAGCAAGGTCAGTGAAGACCTGAGTCCTTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: ASLLQPWQRQGWTRA*VSCSKVSEDLSPWR Trigger: CCTCCAAGGACTCAGGTCTTCACTGACCTTGCTACATGATACCCACGCCCTGGTCCACCCCTGCCGCTGCCAGGGCTGGAGGAGAGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR GCA 90 bp | AGGATGAGACGTCACCCTGGGTGTCTTCTCGCTGTGACATGGCCCTaGTCTGCAGGCATGGCTGTGCGGAGGACCTCGCTGAGTCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: RMRRHPGCLLAVTWP*SAGMAVRRTSLSQL Trigger: CAACTGACTCAGCGAGGTCCTCCGCACAGCCATGCCTGCAGAGCAGGGCCATGTCACAGCGAGAAGACACCCAGGGTGACGTCTCATCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR CCA 90 bp | ATCCTGAGGATGAGACGTCACCCTGGGTGTCTTCTCGCTGTGACATaGCCCTGCTCTGCAGGCATGGCTGTGCGGAGGACCTCGCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: ILRMRRHPGCLLAVT*PCSAGMAVRRTSLS Trigger: ACTCAGCGAGGTCCTCCGCACAGCCATGCCTGCAGAGCAGGGCCATGTCACAGCGAGAAGACACCCAGGGTGACGTCTCATCCTCAGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR CCA 90 bp | TCACGCTGCTCCAGGGCTGCCTACCTACTCACAGAGCTGCTAGGCTaGCACCTTTGGGCTCTGCCCATCCAGGGACAGATCTGGATAGAA | + |
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Preference number: 1 (lower is better) Translates to: SRCSRAAYLLTELLG*HLWALPIQGQIWIE Trigger: TTCTATCCAGATCTGTCCCTGGATGGGCAGAGCCCAAAGGTGCCAGCCTAGCAGCTCTGTGAGTAGGTAGGCAGCCCTGGAGCAGCGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR TCA 90 bp | CAGACTGCCTTGGCCAGGGTGTGCAGGCTACCAGGGCTGACAGAATaGAGCTTCCAAGTGGGCGCTTTGCTGAATTGTCTCACGGGATGC | + |
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Preference number: 1 (lower is better) Translates to: QTALARVCRLPGLTE*SFQVGALLNCLTGC Trigger: GCATCCCGTGAGACAATTCAGCAAAGCGCCCACTTGGAAGCTTCATTCTGTCAGCCCTGGTAGCCTGCACACCCTGGCCAAGGCAGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR CCA 90 bp | TCCAGGGCTGCCTACCTACTCACAGAGCTGCTAGGCTGGCACCTTTaGGCTCTGCCCATCCAGGGACAGATCTGGATAGAAACTGCTAGT | + |
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Preference number: 1 (lower is better) Translates to: SRAAYLLTELLGWHL*ALPIQGQIWIETAS Trigger: ACTAGCAGTTTCTATCCAGATCTGTCCCTGGATGGGCAGAGCCCAAAGGTGCCAGCCTAGCAGCTCTGTGAGTAGGTAGGCAGCCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR CCA 90 bp | AGGGCGTGGGTATCATGTAGCAAGGTCAGTGAAGACCTGAGTCCTTaGAGGACAGTGCAATTCCTGAGATCCAGGGGCACCCACAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: RAWVSCSKVSEDLSP*RTVQFLRSRGTHSC Trigger: GCAGCTGTGGGTGCCCCTGGATCTCAGGAATTGCACTGTCCTCCAAGGACTCAGGTCTTCACTGACCTTGCTACATGATACCCACGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR GCA 90 bp | TGCTTTGATTCCAAATGGAGCCTCCTCTTAGCCAGTGCTTCAGACTaGCTTGGCCAGGGTGTGCAGGCTACCAGGGCTGACAGAATGAAG | + |
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Preference number: 1 (lower is better) Translates to: CFDSKWSLLLASASD*LGQGVQATRADRMK Trigger: CTTCATTCTGTCAGCCCTGGTAGCCTGCACACCCTGGCCAAGGCAGTCTGAAGCACTGGCTAAGAGGAGGCTCCATTTGGAATCAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR CCA 90 bp | CTGCTAGGCTGGCACCTTTGGGCTCTGCCCATCCAGGGACAGATCTaGATAGAAACTGCTAGTTCATTTACTCTTTCTAGCCAGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: LLGWHLWALPIQGQI*IETASSFTLSSQLS Trigger: AGAAAGCTGGCTAGAAAGAGTAAATGAACTAGCAGTTTCTATCCAGATCTGTCCCTGGATGGGCAGAGCCCAAAGGTGCCAGCCTAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR CCA 90 bp | ACTCGACAATCATTAAATAGCACCGCCGCACAACTGCCTTTAAAGTaGTCCCTGAACATGGCCGCCTTTACAGCTGCTCTTTTGTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: TRQSLNSTAAQLPLK*SLNMAAFTAALLSG Trigger: TCCAGACAAAAGAGCAGCTGTAAAGGCGGCCATGTTCAGGGACCACTTTAAAGGCAGTTGTGCGGCGGTGCTATTTAATGATTGTCGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR GCA 90 bp | AATACTAAACAGAGGATTTTGTGTATGCCTCGAAACAGAAGTCAGTaGAAGAGGACCTGGAAAGCCGTGTGGCCTGCAGAATTCTGTAGC | + |
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Preference number: 1 (lower is better) Translates to: NTKQRILCMPRNRSQ*KRTWKAVWPAEFCS Trigger: GCTACAGAATTCTGCAGGCCACACGGCTTTCCAGGTCCTCTTGCACTGACTTCTGTTTCGAGGCATACACAAAATCCTCTGTTTAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR CCA 90 bp | AAAGTGGTCCCTGAACATGGCCGCCTTTACAGCTGCTCTTTTGTCTaGATGGGACTGAATACTAAACAGAGGATTTTGTGTATGCCTCGA | + |
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Preference number: 1 (lower is better) Translates to: KVVPEHGRLYSCSFV*MGLNTKQRILCMPR Trigger: TCGAGGCATACACAAAATCCTCTGTTTAGTATTCAGTCCCATCCAGACAAAAGAGCAGCTGTAAAGGCGGCCATGTTCAGGGACCACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGTTGGGAATGCCTTCAGAGGAAAACTGGTCATGCGCCCAGGGCTTCGGCCTCTGTGTGTGTCAGTaGCTCTCTGTCCCCGCCACC | + |
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Preference number: 2 (lower is better) Translates to: PGLGMPSEENWSCAQGFGLCVCQ*LSVPAT Trigger: GGTGGCGGGGACAGAGAGTCACTGACACACACAGAG...GCCGAAGCCCTGGGCGCATGACCAGTTTTCCTCTGAAGGCATTCCCAACCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTCTTAGCCAGTGCTTCAGACTGCCTTGGCCAGGGTGTGCAGGCTACCAGGCTGTGACATGGCCCTaGTCTGCAGGCATGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PPLSQCFRLPWPGCAGYQAVTWP*SAGMAV Trigger: CACAGCCATGCCTGCAGAGCAGGGCCATGTCACAGC...CTGGTAGCCTGCACACCCTGGCCAAGGCAGTCTGAAGCACTGGCTAAGAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGTGTCTTCTCGCTGTGACATGGCCCTGCTCTGCAGGCATGGCTGTGCGGTCGCTGAGTCAGTTGTaGTGTGCAGCAAGGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: PGCLLAVTWPCSAGMAVRSLSQL*CAARAT Trigger: TGTGGCCCTTGCTGCACACCACAACTGACTCAGCGA...CCGCACAGCCATGCCTGCAGAGCAGGGCCATGTCACAGCGAGAAGACACCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGCACCAGAGTACCTGGGGGTGACCCGAGATCACCCACCATTCGCTGGTGACCTTCTCGCTGTGACATaGCCCTGCTCTGCAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: LAPEYLGVTRDHPPFAGDLLAVT*PCSAGM Trigger: CATGCCTGCAGAGCAGGGCCATGTCACAGCGAGAAG...GTCACCAGCGAATGGTGGGTGATCTCGGGTCACCCCCAGGTACTCTGGTGCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGTGTCTTCTCGCTGTGACATGGCCCTGCTCTGCAGGCATGGCTGTGCGGCCCGGAACCAGCAAGTaGCATTTGCTGAGAAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: PGCLLAVTWPCSAGMAVRPGTSK*HLLRRS Trigger: ACTTCTTCTCAGCAAATGGCACTTGCTGGTTCCGGG...CCGCACAGCCATGCCTGCAGAGCAGGGCCATGTCACAGCGAGAAGACACCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR-3UTR TCA 90 bp | ACGAGATGCACACTTCCCCCAGTGCAGAACCTAAAACCAGCTCTTGTAACAGTCCACGGGATGCGGCTGTaGTGGCAGCAGACGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: TRCTLPPVQNLKPALVTVHGMRL*WQQTWG Trigger: CCCCCACGTCTGCTGCCATCACAGCCGCATCCCGTG...GACTGTTACAAGAGCTGGTTTTAGGTTCTGCACTGGGGGAAGTGTGCATCTCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR TCA 90 bp | GGCATAATTGGGCCATTCTTGTGTCAGTGCTCCCAGTCAGTGCTCCCAGCTCCACTCTGTGTGTGTCAGTaGCTCTCTGTCCCCGCCACC | + |
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Preference number: 2 (lower is better) Translates to: GIIGPFLCQCSQSVLPAPLCVCQ*LSVPAT Trigger: GGTGGCGGGGACAGAGAGTCACTGACACACACAGAG...TGGAGCTGGGAGCACTGACTGGGAGCACTGACACAAGAATGGCCCAATTATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR TCA 90 bp | ACGTGGGGGATCCTGAGGATGAGACGTCACCCTGGGTGTCTTCTCGCTGTGACATTTGCTGAGAAGAAGTaGAAAGCGACTCGGAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: TWGILRMRRHPGCLLAVTFAEKK*KATRKR Trigger: CCGCTTCCGAGTCGCTTTTCACTTCTTCTCAGCAAA...TGTCACAGCGAGAAGACACCCAGGGTGACGTCTCATCCTCAGGATCCCCCACGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTCTTAGCCAGTGCTTCAGACTGCCTTGGCCAGGGTGTGCAGGCTACCAGGCAAGTGCCATTTGCTaGGAAGAAGTGAAAAGCGAC | + |
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Preference number: 2 (lower is better) Translates to: PPLSQCFRLPWPGCAGYQASAIC*EEVKSD Trigger: GTCGCTTTTCACTTCTTCTCAGCAAATGGCACTTGC...CTGGTAGCCTGCACACCCTGGCCAAGGCAGTCTGAAGCACTGGCTAAGAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCCTCCAGCCCTGGCAGCGGCAGGGGTGGACCAGGGCGTGGGTATCATGTAGCTGCTCTTTTGTCTaGATGGGACTGAATACTAAA | + |
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Preference number: 2 (lower is better) Translates to: SLLQPWQRQGWTRAWVSCSCSFV*MGLNTK Trigger: TTTAGTATTCAGTCCCATCCAGACAAAAGAGCAGCT...ACATGATACCCACGCCCTGGTCCACCCCTGCCGCTGCCAGGGCTGGAGGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGCCAGCAAGACCAGGAGGCATAATTGGGCCATTCTTGTGTCAGTGCTCCTTCTCGCTGTGACATaGCCCTGCTCTGCAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: LEASKTRRHNWAILVSVLLLAVT*PCSAGM Trigger: CATGCCTGCAGAGCAGGGCCATGTCACAGCGAGAAG...GAGCACTGACACAAGAATGGCCCAATTATGCCTCCTGGTCTTGCTGGCTTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTGCCTACCTACTCACAGAGCTGCTAGGCTGGCACCTTTGGGCTCTGCCCATCCAGGGACAGATCTaGATAGAAACTGCTAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: RAAYLLTELLGWHLWALPIQGQI*IETASS Trigger: TGAACTAGCAGTTTCTATCCAGATCTGTCCCTGGAT...GGGCAGAGCCCAAAGGTGCCAGCCTAGCAGCTCTGTGAGTAGGTAGGCAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR GCA 90 bp | GGACAATTCCAGAGGAAGTCCCACCAAAGGGGTCAAGGTGACCGGGTTTTACCCCCCGGAACCAGCAAGTaGCATTTGCTGAGAAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: GQFQRKSHQRGQGDRVLPPGTSK*HLLRRS Trigger: ACTTCTTCTCAGCAAATGGCACTTGCTGGTTCCGGG...GGGTAAAACCCGGTCACCTTGACCCCTTTGGTGGGACTTCCTCTGGAATTGTCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGAAGCCAGCAAGACCAGGAGGCATAATTGGGCCATTCTTGTGTCAGTGCTCCCCCTGGGTTGGGAATaGCTTCAGAGGAAAACTGGT | + |
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Preference number: 2 (lower is better) Translates to: LEASKTRRHNWAILVSVLPLGWE*LQRKTG Trigger: ACCAGTTTTCCTCTGAAGGCATTCCCAACCCAGGGG...GAGCACTGACACAAGAATGGCCCAATTATGCCTCCTGGTCTTGCTGGCTTCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR TCA 90 bp | ATATGCCACTTTCTAATCTTGAAGCCAGCAAGACCAGGAGGCATAATTGGGCCACCAGGGCTGACAGAATaGAGCTTCCAAGTGGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: ICHFLILKPARPGGIIGPPGLTE*SFQVGA Trigger: AGCGCCCACTTGGAAGCTTCATTCTGTCAGCCCTGG...TGGCCCAATTATGCCTCCTGGTCTTGCTGGCTTCAAGATTAGAAAGTGGCATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGCCAGCAAGACCAGGAGGCATAATTGGGCCATTCTTGTGTCAGTGCTCGAAGACCTGAGTCCTTaGAGGACAGTGCAATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LEASKTRRHNWAILVSVLEDLSP*RTVQFL Trigger: CAGGAATTGCACTGTCCTCCAAGGACTCAGGTCTTC...GAGCACTGACACAAGAATGGCCCAATTATGCCTCCTGGTCTTGCTGGCTTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR CCA 90 bp | GTATCATGTAGCAAGGTCAGTGAAGACCTGAGTCCTTGGAGGACAGTGCAATTCCAACTGCCTTTAAAGTaGTCCCTGAACATGGCCGCC | + |
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Preference number: 2 (lower is better) Translates to: VSCSKVSEDLSPWRTVQFQLPLK*SLNMAA Trigger: GGCGGCCATGTTCAGGGACCACTTTAAAGGCAGTTG...GAATTGCACTGTCCTCCAAGGACTCAGGTCTTCACTGACCTTGCTACATGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR TCA 90 bp | CACATAAAACCCTTTTATACACATTTCAGATGCATCCATCTGGAGACACAGCACCCAGGGCTGACAGAATaGAGCTTCCAAGTGGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: HIKPFYTHFRCIHLETQHPGLTE*SFQVGA Trigger: AGCGCCCACTTGGAAGCTTCATTCTGTCAGCCCTGG...GTGCTGTGTCTCCAGATGGATGCATCTGAAATGTGTATAAAAGGGTTTTATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCAAATATGCCACTTTCTAATCTTGAAGCCAGCAAGACCAGGAGGCATAATCGGCAAAGCATCCTCTaGCTGCATCTCTCCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RSNMPLSNLEASKTRRHNRQSIL*LHLSSS Trigger: GCTGGAGGAGAGATGCAGTCAGAGGATGCTTTGCCG...ATTATGCCTCCTGGTCTTGCTGGCTTCAAGATTAGAAAGTGGCATATTTGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTAGGCCTGAATTTCACATAAAACCCTTTTATACACATTTCAGATGCATCGCCAGTGCTTCAGACTaGCTTGGCCAGGGTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LCRPEFHIKPFYTHFRCIASASD*LGQGVQ Trigger: CTGCACACCCTGGCCAAGGCAGTCTGAAGCACTGGC...GATGCATCTGAAATGTGTATAAAAGGGTTTTATGTGAAATTCAGGCCTACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR-3UTR CCA 90 bp | TTTACTCTTTCTAGCCAGCTTTCTACTCGACAATCATTAAATAGCACCGCCGCAGAGAAGCCCCTGGGTTaGGAATGCCTTCAGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: FTLSSQLSTRQSLNSTAAEKPLG*ECLQRK Trigger: TTTCCTCTGAAGGCATTCCCAACCCAGGGGCTTCTC...TGCGGCGGTGCTATTTAATGATTGTCGAGTAGAAAGCTGGCTAGAAAGAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR TCA 90 bp | CAGGGACAGATCTGGATAGAAACTGCTAGTTCATTTACTCTTTCTAGCCAGCTTTTTGCTGAGAAGAAGTaGAAAGCGACTCGGAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: QGQIWIETASSFTLSSQLFAEKK*KATRKR Trigger: CCGCTTCCGAGTCGCTTTTCACTTCTTCTCAGCAAA...AAGCTGGCTAGAAAGAGTAAATGAACTAGCAGTTTCTATCCAGATCTGTCCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR GCA 90 bp | AGATCAAATATGCCACTTTCTAATCTTGAAGCCAGCAAGACCAGGAGGCATAATAAAGCATCCTCTGACTaGATCTCTCCTCCAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RSNMPLSNLEASKTRRHNKASSD*ISPPAL Trigger: CAGGGCTGGAGGAGAGATGCAGTCAGAGGATGCTTT...ATTATGCCTCCTGGTCTTGCTGGCTTCAAGATTAGAAAGTGGCATATTTGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR GCA 90 bp | GTATCATGTAGCAAGGTCAGTGAAGACCTGAGTCCTTGGAGGACAGTGCAATTCAGAGGATTTTGTGTATaGCTCGAAACAGAAGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: VSCSKVSEDLSPWRTVQFRGFCV*LETEVS Trigger: ACTGACTTCTGTTTCGAGGCATACACAAAATCCTCT...GAATTGCACTGTCCTCCAAGGACTCAGGTCTTCACTGACCTTGCTACATGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR CCA 90 bp | CTCAAATATACCAGATCAAATATGCCACTTTCTAATCTTGAAGCCAGCAAGACCACCTGGAAAGCCGTGTaGCCTGCAGAATTCTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: LKYTRSNMPLSNLEASKTTWKAV*PAEFCS Trigger: GCTACAGAATTCTGCAGGCCACACGGCTTTCCAGGT...GGTCTTGCTGGCTTCAAGATTAGAAAGTGGCATATTTGATCTGGTATATTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTAGGCCTGAATTTCACATAAAACCCTTTTATACACATTTCAGATGCATCGCAAGTGCCATTTGCTaGGAAGAAGTGAAAAGCGAC | + |
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Preference number: 2 (lower is better) Translates to: LCRPEFHIKPFYTHFRCIASAIC*EEVKSD Trigger: GTCGCTTTTCACTTCTTCTCAGCAAATGGCACTTGC...GATGCATCTGAAATGTGTATAAAAGGGTTTTATGTGAAATTCAGGCCTACACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR CAA 90 bp | TTTGTCTTCTCAAATATACCAGATCAAATATGCCACTTTCTAATCTaGAAGCCAGCAAGACCAGGAGGCATAATTGGGCCATTCTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: FVFSNIPDQICHFLI*KPARPGGIIGPFLC Trigger: ACACAAGAATGGCCCAATTATGCCTCCTGGTCTTGCTGGCTTCAAGATTAGAAAGTGGCATATTTGATCTGGTATATTTGAGAAGACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR-3UTR GCA 90 bp | CAGATCTGGATAGAAACTGCTAGTTCATTTACTCTTTCTAGCCAGCTTTCTACTTATACACATTTCAGATaGATCCATCTGGAGACACAG | + |
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Preference number: 2 (lower is better) Translates to: QIWIETASSFTLSSQLSTYTHFR*IHLETQ Trigger: CTGTGTCTCCAGATGGATGCATCTGAAATGTGTATA...AGTAGAAAGCTGGCTAGAAAGAGTAAATGAACTAGCAGTTTCTATCCAGATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR TCA 72 bp | ATGCCGGGGGCGAGGGGCCACATTGAGGTGGACAACTaGGCATCGGCCCTCACGCTGCTCCAGGGCTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: MPGARGHIEVDN*ASALTLLQGCL Trigger: TAGGCAGCCCTGGAGCAGCGTGAGGGCCGATGCTCAGTTGTCCACCTCAATGTGGCCCCTCGCCCCCGGCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| 3UTR GCA 72 bp | CGTCACCCTGGGTGTCTTCTCGCTGTGACATGGCCCTaGTCTGCAGGCATGGCTGTGCGGAGGACCTCGCTG | + |
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Preference number: 3 (lower is better) Translates to: RHPGCLLAVTWP*SAGMAVRRTSL Trigger: CAGCGAGGTCCTCCGCACAGCCATGCCTGCAGAGCAGGGCCATGTCACAGCGAGAAGACACCCAGGGTGACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR GCA 72 bp | CCCTGGGTGTCTTCTCGCTGTGACATGGCCCTGCTCTaGAGGCATGGCTGTGCGGAGGACCTCGCTGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PWVSSRCDMALL*RHGCAEDLAES Trigger: TGACTCAGCGAGGTCCTCCGCACAGCCATGCCTGCAGAGCAGGGCCATGTCACAGCGAGAAGACACCCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR GCA 72 bp | CTTGCACTGCTAAGCACCGGCAAAGCATCCTCTGACTaGATCTCTCCTCCAGCCCTGGCAGCGGCAGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LALLSTGKASSD*ISPPALAAAGV Trigger: CACCCCTGCCGCTGCCAGGGCTGGAGGAGAGATGCAGTCAGAGGATGCTTTGCCGGTGCTTAGCAGTGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR CCA 72 bp | CTCCAGCCCTGGCAGCGGCAGGGGTGGACCAGGGCGTaGGTATCATGTAGCAAGGTCAGTGAAGACCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LQPWQRQGWTRA*VSCSKVSEDLS Trigger: ACTCAGGTCTTCACTGACCTTGCTACATGATACCCACGCCCTGGTCCACCCCTGCCGCTGCCAGGGCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR CCA 72 bp | TCCAGGGCTGCCTACCTACTCACAGAGCTGCTAGGCTaGCACCTTTGGGCTCTGCCCATCCAGGGACAGATC | + |
|
Preference number: 3 (lower is better) Translates to: SRAAYLLTELLG*HLWALPIQGQI Trigger: GATCTGTCCCTGGATGGGCAGAGCCCAAAGGTGCCAGCCTAGCAGCTCTGTGAGTAGGTAGGCAGCCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR TCA 72 bp | GCCCGGAACCAGCAAGTGCCATTTGCTGAGAAGAAGTaGAAAGCGACTCGGAAGCGGGGCCGAGGGTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: ARNQQVPFAEKK*KATRKRGRGYQ Trigger: CTGGTACCCTCGGCCCCGCTTCCGAGTCGCTTTTCACTTCTTCTCAGCAAATGGCACTTGCTGGTTCCGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR TCA 72 bp | GGGCGCTTTGCTGAATTGTCTCACGGGATGCGGCTGTaGTGGCAGCAGACGTGGGGGATCCTGAGGATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GRFAELSHGMRL*WQQTWGILRMR Trigger: TCTCATCCTCAGGATCCCCCACGTCTGCTGCCATCACAGCCGCATCCCGTGAGACAATTCAGCAAAGCGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR GCA 72 bp | TCCAAATGGAGCCTCCTCTTAGCCAGTGCTTCAGACTaGCTTGGCCAGGGTGTGCAGGCTACCAGGGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SKWSLLLASASD*LGQGVQATRAD Trigger: GTCAGCCCTGGTAGCCTGCACACCCTGGCCAAGGCAGTCTGAAGCACTGGCTAAGAGGAGGCTCCATTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR CCA 72 bp | AAGCCGTGTGGCCTGCAGAATTCTGTAGCGAGTAACTaGACCAGCACGAGATGCACACTTCCCCCAGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KPCGLQNSVASN*TSTRCTLPPVQ Trigger: CTGCACTGGGGGAAGTGTGCATCTCGTGCTGGTCCAGTTACTCGCTACAGAATTCTGCAGGCCACACGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR TCA 72 bp | TTGGCCAGGGTGTGCAGGCTACCAGGGCTGACAGAATaGAGCTTCCAAGTGGGCGCTTTGCTGAATTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LARVCRLPGLTE*SFQVGALLNCL Trigger: GAGACAATTCAGCAAAGCGCCCACTTGGAAGCTTCATTCTGTCAGCCCTGGTAGCCTGCACACCCTGGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR TCA 72 bp | GTATCGAACTCACCGAGTACCCTCTGTGTGTGTCAGTaGCTCTCTGTCCCCGCCACCCCCTACCTCTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: VSNSPSTLCVCQ*LSVPATPYLFQ Trigger: TTGAAAGAGGTAGGGGGTGGCGGGGACAGAGAGTCACTGACACACACAGAGGGTACTCGGTGAGTTCGATAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR GCA 72 bp | AGACCAGGAGGCATAATTGGGCCATTCTTGTGTCAGTaGTCCCAGTCAGTGCTCCCAGCTCCAGGAGATTGC | + |
|
Preference number: 3 (lower is better) Translates to: RPGGIIGPFLCQ*SQSVLPAPGDC Trigger: GCAATCTCCTGGAGCTGGGAGCACTGACTGGGAGCACTGACACAAGAATGGCCCAATTATGCCTCCTGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR GCA 72 bp | AAGAATGGATGTGGAACCAGGAGTAGACATAAGGCTTaGACCAGAGTACCTGGGGGTGACCCGAGATCACCC | + |
|
Preference number: 3 (lower is better) Translates to: KNGCGTRSRHKA*TRVPGGDPRSP Trigger: GGGTGATCTCGGGTCACCCCCAGGTACTCTGGTGCAAGCCTTATGTCTACTCCTGGTTCCACATCCATTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR CCA 72 bp | TGTATGCCTCGAAACAGAAGTCAGTGCAAGAGGACCTaGAAAGCCGTGTGGCCTGCAGAATTCTGTAGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: CMPRNRSQCKRT*KAVWPAEFCSE Trigger: CTCGCTACAGAATTCTGCAGGCCACACGGCTTTCCAGGTCCTCTTGCACTGACTTCTGTTTCGAGGCATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR CCA 72 bp | GTATCATGTAGCAAGGTCAGTGAAGACCTGAGTCCTTaGAGGACAGTGCAATTCCTGAGATCCAGGGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: VSCSKVSEDLSP*RTVQFLRSRGT Trigger: GGTGCCCCTGGATCTCAGGAATTGCACTGTCCTCCAAGGACTCAGGTCTTCACTGACCTTGCTACATGATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR TCA 72 bp | ACAATTCCAGAGGAAGTCCCACCAAAGGGGTCAAGGTaGCCGGGTTTTACCCATGTGACCAGATGGTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: TIPEEVPPKGSR*PGFTHVTRWCN Trigger: GTTACACCATCTGGTCACATGGGTAAAACCCGGTCACCTTGACCCCTTTGGTGGGACTTCCTCTGGAATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR GCA 72 bp | CAGAGGATTTTGTGTATGCCTCGAAACAGAAGTCAGTaGAAGAGGACCTGGAAAGCCGTGTGGCCTGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QRILCMPRNRSQ*KRTWKAVWPAE Trigger: TTCTGCAGGCCACACGGCTTTCCAGGTCCTCTTGCACTGACTTCTGTTTCGAGGCATACACAAAATCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCCTGGGTTGGGAATGCCTTCAGAGGAAAACTGGTCATGCGCCCAGGGCTTATGGATACAGAACTGTaGACAAAGCTGTCTTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SPWVGNAFRGKLVMRPGLMDTEL*TKLSFL Trigger: TAGAAAAGACAGCTTTGTCAACAGTTCTGTATCCAT...AAGCCCTGGGCGCATGACCAGTTTTCCTCTGAAGGCATTCCCAACCCAGGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR CCA 72 bp | TCATTAAATAGCACCGCCGCACAACTGCCTTTAAAGTaGTCCCTGAACATGGCCGCCTTTACAGCTGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLNSTAAQLPLK*SLNMAAFTAAL Trigger: AAGAGCAGCTGTAAAGGCGGCCATGTTCAGGGACCACTTTAAAGGCAGTTGTGCGGCGGTGCTATTTAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR TCA 72 bp | CCCTACCTCTTTCAAAACCCAGCTGTAGAAGTGCTTTaGTTCCAAATGGAGCCTCCTCTTAGCCAGTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PYLFQNPAVEVL*FQMEPPLSQCF Trigger: GAAGCACTGGCTAAGAGGAGGCTCCATTTGGAATCAAAGCACTTCTACAGCTGGGTTTTGAAAGAGGTAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR CCA 72 bp | TGGCACCTTTGGGCTCTGCCCATCCAGGGACAGATCTaGATAGAAACTGCTAGTTCATTTACTCTTTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: WHLWALPIQGQI*IETASSFTLSS Trigger: GCTAGAAAGAGTAAATGAACTAGCAGTTTCTATCCAGATCTGTCCCTGGATGGGCAGAGCCCAAAGGTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGTATCGAACTCACCGAGTACCCTCTGTGTGTGTCAGTGACTCTCTGTCCCATGGATACAGAACTGTaGACAAAGCTGTCTTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GGIELTEYPLCVSVTLCPMDTEL*TKLSFL Trigger: TAGAAAAGACAGCTTTGTCAACAGTTCTGTATCCAT...GGGACAGAGAGTCACTGACACACACAGAGGGTACTCGGTGAGTTCGATACCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTGCCCTTCCCCGTTTGCAAGTCAAGTTTAAGCTGTGTAGGCCTGAATTTCACCAGCAAGTGCCATTaGCTGAGAAGAAGTGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SVPFPVCKSSLSCVGLNFTSKCH*LRRSEK Trigger: CTTTTCACTTCTTCTCAGCAAATGGCACTTGCTGGT...GAAATTCAGGCCTACACAGCTTAAACTTGACTTGCAAACGGGGAAGGGCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR CCA 72 bp | ACAGCTTATGACTGTTGCCTAATTGGTATGCACCAGTaGGAGTTAAAACATGGGCCAGACCCTAACAGGATC | + |
|
Preference number: 3 (lower is better) Translates to: TAYDCCLIGMHQ*ELKHGPDPNRI Trigger: GATCCTGTTAGGGTCTGGCCCATGTTTTAACTCCCACTGGTGCATACCAATTAGGCAACAGTCATAAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR TCA 72 bp | GCCGCCTTTACAGCTGCTCTTTTGTCTGGATGGGACTaGATACTAAACAGAGGATTTTGTGTATGCCTCGAA | + |
|
Preference number: 3 (lower is better) Translates to: AAFTAALLSGWD*ILNRGFCVCLE Trigger: TTCGAGGCATACACAAAATCCTCTGTTTAGTATTCAGTCCCATCCAGACAAAAGAGCAGCTGTAAAGGCGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR GCA 72 bp | TTTAAAGTGGTCCCTGAACATGGCCGCCTTTACAGCTaGTCTTTTGTCTGGATGGGACTGAATACTAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: FKVVPEHGRLYS*SFVWMGLNTKQ Trigger: CTGTTTAGTATTCAGTCCCATCCAGACAAAAGAGCAGCTGTAAAGGCGGCCATGTTCAGGGACCACTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| 3UTR-3UTR CAA 90 bp | CACATAAAACCCTTTTATACACATTTCAGATGCATCCATCTGGAGACACAGCACACCAGCAAGTGCCATTaGCTGAGAAGAAGTGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HIKPFYTHFRCIHLETQHTSKCH*LRRSEK Trigger: CTTTTCACTTCTTCTCAGCAAATGGCACTTGCTGGT...GTGCTGTGTCTCCAGATGGATGCATCTGAAATGTGTATAAAAGGGTTTTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGGTGTCTTCTCGCTGTGACATGGCCCTGCTCTGCAGGCATGGCTGTGCGGTCCCACCGTGTGCTGTaGTGGGAGGAAGGACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGCLLAVTWPCSAGMAVRSHRVL*WEEGQC Trigger: ACACTGTCCTTCCTCCCAGCACAGCACACGGTGGGA...CCGCACAGCCATGCCTGCAGAGCAGGGCCATGTCACAGCGAGAAGACACCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTGCCTACCTACTCACAGAGCTGCTAGGCTGGCACCTTTGGGCTCTGCCCCACCGTGTGCTGTGCTaGGAGGAAGGACAGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RAAYLLTELLGWHLWALPHRVLC*EEGQCP Trigger: GGGACACTGTCCTTCCTCCCAGCACAGCACACGGTG...GGGCAGAGCCCAAAGGTGCCAGCCTAGCAGCTCTGTGAGTAGGTAGGCAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCTTAGCCAGTGCTTCAGACTGCCTTGGCCAGGGTGTGCAGGCTACCAGCGCACCAGCTGGCAGTaGACCCTGACCTCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPLSQCFRLPWPGCAGYQRTSWQ*TLTSMA Trigger: GGCCATTGAGGTCAGGGTCCACTGCCAGCTGGTGCG...CTGGTAGCCTGCACACCCTGGCCAAGGCAGTCTGAAGCACTGGCTAAGAGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS-3UTR CCA 90 bp | ACGTGGGGGATCCTGAGGATGAGACGTCACCCTGGGTGTCTTCTCGCTGTGACATCCCAGATGGGCAAATaGGGACAGGCCCCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TWGILRMRRHPGCLLAVTSQMGK*GQAPRA Trigger: AGCCCTGGGGGCCTGTCCCCATTTGCCCATCTGGGA...TGTCACAGCGAGAAGACACCCAGGGTGACGTCTCATCCTCAGGATCCCCCACGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCGAGAAGCCCCTGGGTTGGGAATGCCTTCAGAGGAAAACTGGTCATGCGCGGAGATCCCACCGTGTaGTGTGCTGGGAGGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WPRSPWVGNAFRGKLVMRGDPTV*CAGRKD Trigger: GTCCTTCCTCCCAGCACAGCACACGGTGGGATCTCC...GCGCATGACCAGTTTTCCTCTGAAGGCATTCCCAACCCAGGGGCTTCTCGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS-3UTR CCA 90 bp | GGACAATTCCAGAGGAAGTCCCACCAAAGGGGTCAAGGTGACCGGGTTTTACCCCGCACCAGCTGGCAGTaGACCCTGACCTCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQFQRKSHQRGQGDRVLPRTSWQ*TLTSMA Trigger: GGCCATTGAGGTCAGGGTCCACTGCCAGCTGGTGCG...GGGTAAAACCCGGTCACCTTGACCCCTTTGGTGGGACTTCCTCTGGAATTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS-3UTR TCA 90 bp | ATATGCCACTTTCTAATCTTGAAGCCAGCAAGACCAGGAGGCATAATTGGGCCAGCGCGGGCTCCAGGCTaGCGGCACAGCGTCGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ICHFLILKPARPGGIIGPARAPG*RHSVAV Trigger: AACGGCGACGCTGTGCCGTCAGCCTGGAGCCCGCGC...TGGCCCAATTATGCCTCCTGGTCTTGCTGGCTTCAAGATTAGAAAGTGGCATAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR GCA 90 bp | AGCAAGTGCCATTTGCTGAGAAGAAGTGAAAAGCGACTCGGAAGCGGGGCCGAGGGAGATCCCACCGTGTaGTGTGCTGGGAGGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SKCHLLRRSEKRLGSGAEGDPTV*CAGRKD Trigger: GTCCTTCCTCCCAGCACAGCACACGGTGGGATCTCC...CTCGGCCCCGCTTCCGAGTCGCTTTTCACTTCTTCTCAGCAAATGGCACTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS-3UTR GCA 90 bp | ACGTGGGGGATCCTGAGGATGAGACGTCACCCTGGGTGTCTTCTCGCTGTGACAAGCTGTTGCTTGCTCTaGCTGCACACGAAGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TWGILRMRRHPGCLLAVTSCCLL*LHTKHP Trigger: TGGGTGCTTCGTGTGCAGGCAGAGCAAGCAACAGCT...TGTCACAGCGAGAAGACACCCAGGGTGACGTCTCATCCTCAGGATCCCCCACGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR CAA 72 bp | GCACAGGCCATAGTATGTGGCCGAGAAGCCCCTGGGTaGGGAATGCCTTCAGAGGAAAACTGGTCATGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQAIVCGREAPG*GMPSEENWSCA Trigger: GGCGCATGACCAGTTTTCCTCTGAAGGCATTCCCAACCCAGGGGCTTCTCGGCCACATACTATGGCCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR CAA 72 bp | TCAGTGCTCCCAGTCAGTGCTCCCAGCTCCAGGAGATaGCATTGGCTGAAGCATCCTCTGGGAAACCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVLPVSAPSSRR*HWLKHPLGNQP Trigger: CGGCTGGTTTCCCAGAGGATGCTTCAGCCAATGCAATCTCCTGGAGCTGGGAGCACTGACTGGGAGCACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR TCA 90 bp | GGTGGTATCGAACTCACCGAGTACCCTCTGTGTGTGTCAGTGACTCTCTGTCCCGGAGCTTCTGGAGGCTaGGCAAGTGCAAGAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGIELTEYPLCVSVTLCPGASGG*ASARGS Trigger: AGACCCTCTTGCACTTGCTCAGCCTCCAGAAGCTCC...GGGACAGAGAGTCACTGACACACACAGAGGGTACTCGGTGAGTTCGATACCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS-3UTR TCA 90 bp | GGACAATTCCAGAGGAAGTCCCACCAAAGGGGTCAAGGTGACCGGGTTTTACCCGGAGCTTCTGGAGGCTaGGCAAGTGCAAGAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQFQRKSHQRGQGDRVLPGASGG*ASARGS Trigger: AGACCCTCTTGCACTTGCTCAGCCTCCAGAAGCTCC...GGGTAAAACCCGGTCACCTTGACCCCTTTGGTGGGACTTCCTCTGGAATTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR CAA 72 bp | TGCCTACCTACTCACAGAGCTGCTAGGCTGGCACCTTaGGGCTCTGCCCATCCAGGGACAGATCTGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLPTHRAARLAP*GSAHPGTDLDR Trigger: TCTATCCAGATCTGTCCCTGGATGGGCAGAGCCCAAAGGTGCCAGCCTAGCAGCTCTGTGAGTAGGTAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR GCA 90 bp | CAGGGACAGATCTGGATAGAAACTGCTAGTTCATTTACTCTTTCTAGCCAGCTTACCCACAGCACGGAGTaGAGCGGCTCCGCCGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGQIWIETASSFTLSSQLTHSTE*SGSAAP Trigger: GGGGGCGGCGGAGCCGCTGCACTCCGTGCTGTGGGT...AAGCTGGCTAGAAAGAGTAAATGAACTAGCAGTTTCTATCCAGATCTGTCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR GCA 90 bp | GGACAATTCCAGAGGAAGTCCCACCAAAGGGGTCAAGGTGACCGGGTTTTACCCTGGAGGCTGAGCAAGTaGAAGAGGGTCTGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQFQRKSHQRGQGDRVLPWRLSK*KRVCPC Trigger: GCAAGGACAGACCCTCTTGCACTTGCTCAGCCTCCA...GGGTAAAACCCGGTCACCTTGACCCCTTTGGTGGGACTTCCTCTGGAATTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| 3UTR CAA 72 bp | AAGCCAGCAAGACCAGGAGGCATAATTGGGCCATTCTaGTGTCAGTGCTCCCAGTCAGTGCTCCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPARPGGIIGPF*CQCSQSVLPAP Trigger: TGGAGCTGGGAGCACTGACTGGGAGCACTGACACAAGAATGGCCCAATTATGCCTCCTGGTCTTGCTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR TCA 90 bp | GGACAATTCCAGAGGAAGTCCCACCAAAGGGGTCAAGGTGACCGGGTTTTACCCGGAATCTCAGGAAGTTaGACCTGGAGCACTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQFQRKSHQRGQGDRVLPGISGS*TWSTSG Trigger: TCCGGAAGTGCTCCAGGTTCAACTTCCTGAGATTCC...GGGTAAAACCCGGTCACCTTGACCCCTTTGGTGGGACTTCCTCTGGAATTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTATCGAACTCACCGAGTACCCTCTGTGTGTGTCAGTGACTCTCTGTCCCAGTTCCAGGAGCTTCTaGAGGCTGAGCAAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGIELTEYPLCVSVTLCPSSRSF*RLSKCK Trigger: CTTGCACTTGCTCAGCCTCCAGAAGCTCCTGGAACT...GGGACAGAGAGTCACTGACACACACAGAGGGTACTCGGTGAGTTCGATACCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCGAGAAGCCCCTGGGTTGGGAATGCCTTCAGAGGAAAACTGGTCATGCGCATGAATACCAGCAAGTaGTTCGGTCTTGAAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WPRSPWVGNAFRGKLVMRMNTSK*FGLEVR Trigger: CCTGACTTCAAGACCGAAGCACTTGCTGGTATTCAT...GCGCATGACCAGTTTTCCTCTGAAGGCATTCCCAACCCAGGGGCTTCTCGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR CCA 90 bp | GTCGAATTTTTCTTAAGTAATTTCCACACTCCCCGAGCTCAAGGCCGACAGCTCCACCGTGTGCTGTGCTaGGAGGAAGGACAGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VEFFLSNFHTPRAQGRQLHRVLC*EEGQCP Trigger: GGGACACTGTCCTTCCTCCCAGCACAGCACACGGTG...GAGCTGTCGGCCTTGAGCTCGGGGAGTGTGGAAATTACTTAAGAAAAATTCGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTTGTGTCAGTGCTCCCAGTCAGTGCTCCCAGCTCCAGGAGATTGCATTGGAGTTCCAGGAGCTTCTaGAGGCTGAGCAAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILVSVLPVSAPSSRRLHWSSRSF*RLSKCK Trigger: CTTGCACTTGCTCAGCCTCCAGAAGCTCCTGGAACT...CCAATGCAATCTCCTGGAGCTGGGAGCACTGACTGGGAGCACTGACACAAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR TCA 90 bp | AAGCCAATGCCCGGAACCAGCAAGTGCCATTTGCTGAGAAGAAGTGAAAAGCGACAAGTGCTTCGGTCTTaGAGTCAGGCTCTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPMPGTSKCHLLRRSEKRQVLRS*SQALQQ Trigger: CTGCTGGAGAGCCTGACTTCAAGACCGAAGCACTTG...TCGCTTTTCACTTCTTCTCAGCAAATGGCACTTGCTGGTTCCGGGCATTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS-3UTR GCA 90 bp | GTCGAATTTTTCTTAAGTAATTTCCACACTCCCCGAGCTCAAGGCCGACAGCTCTCGATACCAGCGCTCTaGTGCGTCCTCCCAATCACC | + |
|
Preference number: 4 (lower is better) Translates to: VEFFLSNFHTPRAQGRQLSIPAL*CVLPIT Trigger: GGTGATTGGGAGGACGCAGCAGAGCGCTGGTATCGA...GAGCTGTCGGCCTTGAGCTCGGGGAGTGTGGAAATTACTTAAGAAAAATTCGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS-3UTR GCA 90 bp | ACGTGGGGGATCCTGAGGATGAGACGTCACCCTGGGTGTCTTCTCGCTGTGACAATCTTCCCAAACTTCTaGTTCTCTTGTTCCTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TWGILRMRRHPGCLLAVTIFPNF*FSCSFE Trigger: CTCGAAGGAACAAGAGAAGCAGAAGTTTGGGAAGAT...TGTCACAGCGAGAAGACACCCAGGGTGACGTCTCATCCTCAGGATCCCCCACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS-3UTR GCA 90 bp | ACGAGATGCACACTTCCCCCAGTGCAGAACCTAAAACCAGCTCTTGTAACAGTCTGGAGGCTGAGCAAGTaGAAGAGGGTCTGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRCTLPPVQNLKPALVTVWRLSK*KRVCPC Trigger: GCAAGGACAGACCCTCTTGCACTTGCTCAGCCTCCA...GACTGTTACAAGAGCTGGTTTTAGGTTCTGCACTGGGGGAAGTGTGCATCTCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS-3UTR CCA 90 bp | CCTTTTATACACATTTCAGATGCATCCATCTGGAGACACAGCACAGGCCATAGTTCCCAGATGGGCAAATaGGGACAGGCCCCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFIHISDASIWRHSTGHSSQMGK*GQAPRA Trigger: AGCCCTGGGGGCCTGTCCCCATTTGCCCATCTGGGA...ACTATGGCCTGTGCTGTGTCTCCAGATGGATGCATCTGAAATGTGTATAAAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS-3UTR TCA 90 bp | ATATGCCACTTTCTAATCTTGAAGCCAGCAAGACCAGGAGGCATAATTGGGCCAGCCCACTTCCAGCGGTaGTGTCGTACTCGCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ICHFLILKPARPGGIIGPAHFQR*CRTRFT Trigger: TGTGAAGCGAGTACGACATCACCGCTGGAAGTGGGC...TGGCCCAATTATGCCTCCTGGTCTTGCTGGCTTCAAGATTAGAAAGTGGCATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR TCA 90 bp | TTGAAATATGCACGGTCGGCATGGCTAAAATCTAGGAAGCCAATGCCCGGAACCGGAATCTCAGGAAGTTaGACCTGGAGCACTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKYARSAWLKSRKPMPGTGISGS*TWSTSG Trigger: TCCGGAAGTGCTCCAGGTTCAACTTCCTGAGATTCC...GGTTCCGGGCATTGGCTTCCTAGATTTTAGCCATGCCGACCGTGCATATTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS-3UTR TCA 90 bp | CAGATCTGGATAGAAACTGCTAGTTCATTTACTCTTTCTAGCCAGCTTTCTACTGTCTGCAGCCACAGGTaGCACAGCTGCTCGTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QIWIETASSFTLSSQLSTVCSHR*HSCSSA Trigger: CGCCGACGAGCAGCTGTGTCACCTGTGGCTGCAGAC...AGTAGAAAGCTGGCTAGAAAGAGTAAATGAACTAGCAGTTTCTATCCAGATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS-3UTR GCA 90 bp | CCTTTTATACACATTTCAGATGCATCCATCTGGAGACACAGCACAGGCCATAGTTCCCACCGTGTGCTGTaGTGGGAGGAAGGACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PFIHISDASIWRHSTGHSSHRVL*WEEGQC Trigger: ACACTGTCCTTCCTCCCAGCACAGCACACGGTGGGA...ACTATGGCCTGTGCTGTGTCTCCAGATGGATGCATCTGAAATGTGTATAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS-3UTR GCA 90 bp | GGCATAATTGGGCCATTCTTGTGTCAGTGCTCCCAGTCAGTGCTCCCAGCTCCAATCTTCCCAAACTTCTaGTTCTCTTGTTCCTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GIIGPFLCQCSQSVLPAPIFPNF*FSCSFE Trigger: CTCGAAGGAACAAGAGAAGCAGAAGTTTGGGAAGAT...TGGAGCTGGGAGCACTGACTGGGAGCACTGACACAAGAATGGCCCAATTATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS-3UTR GCA 90 bp | CACATAAAACCCTTTTATACACATTTCAGATGCATCCATCTGGAGACACAGCACCCAGAAGGTCACCCGTaGCCACTTCCAGCGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HIKPFYTHFRCIHLETQHPEGHP*PLPAVM Trigger: CATCACCGCTGGAAGTGGGCACGGGTGACCTTCTGG...GTGCTGTGTCTCCAGATGGATGCATCTGAAATGTGTATAAAAGGGTTTTATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR CCA 90 bp | AAGCCAATGCCCGGAACCAGCAAGTGCCATTTGCTGAGAAGAAGTGAAAAGCGACGTATAAAGTCTCCTTaGCTTGGTTGGCATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPMPGTSKCHLLRRSEKRRIKSP*LGWHAL Trigger: CAGAGCATGCCAACCAAGCCAAGGAGACTTTATACG...TCGCTTTTCACTTCTTCTCAGCAAATGGCACTTGCTGGTTCCGGGCATTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR TCA 90 bp | CTTGAAGCCAGCAAGACCAGGAGGCATAATTGGGCCATTCTTGTGTCAGTGCTCCATAGCTGTCTGTGTTaGTCTCGTATAAAGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LEASKTRRHNWAILVSVLHSCLC*SRIKSP Trigger: AGGAGACTTTATACGAGATCAACACAGACAGCTATG...GAGCACTGACACAAGAATGGCCCAATTATGCCTCCTGGTCTTGCTGGCTTCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR TCA 90 bp | AAGCCAATGCCCGGAACCAGCAAGTGCCATTTGCTGAGAAGAAGTGAAAAGCGATCTTTTCACTGTCCTTaGTTAAGTCCCCGTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPMPGTSKCHLLRRSEKRSFHCP*LSPRRN Trigger: GTTTCTACGGGGACTTAATCAAGGACAGTGAAAAGA...TCGCTTTTCACTTCTTCTCAGCAAATGGCACTTGCTGGTTCCGGGCATTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS-3UTR GCA 90 bp | CACATAAAACCCTTTTATACACATTTCAGATGCATCCATCTGGAGACACAGCACAGCTGTTGCTTGCTCTaGCTGCACACGAAGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: HIKPFYTHFRCIHLETQHSCCLL*LHTKHP Trigger: TGGGTGCTTCGTGTGCAGGCAGAGCAAGCAACAGCT...GTGCTGTGTCTCCAGATGGATGCATCTGAAATGTGTATAAAAGGGTTTTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| 3UTR CAA 72 bp | AAACCAGCTCTTGTAACAGTCAGTGCCCTTCCCCGTTaGCAAGTCAAGTTTAAGCTGTGTAGGCCTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: KPALVTVSALPR*QVKFKLCRPEF Trigger: AAATTCAGGCCTACACAGCTTAAACTTGACTTGCAAACGGGGAAGGGCACTGACTGTTACAAGAGCTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS-3UTR GCA 90 bp | CTGTGTAGGCCTGAATTTCACATAAAACCCTTTTATACACATTTCAGATGCATCACAATCTGTGGACCCTaGGGGTATGATGCCGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCRPEFHIKPFYTHFRCITICGP*GYDADP Trigger: AGGATCGGCATCATACCCGCAGGGTCCACAGATTGT...GATGCATCTGAAATGTGTATAAAAGGGTTTTATGTGAAATTCAGGCCTACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS TCA 90 bp | CCGGGCTCCGCCACCAGCGTAGCAGAGCCCGCGCGGGCTCCAGGCTaGCGGCACAGCGTCGCCGTTTCACCCACAGCACGGAGTGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGSATSVAEPARAPG*RHSVAVSPTARSAA Trigger: CGCTGCACTCCGTGCTGTGGGTGAAACGGCGACGCTGTGCCGTCAGCCTGGAGCCCGCGCGGGCTCTGCTACGCTGGTGGCGGAGCCCGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS TCA 90 bp | ATGATGCCGATCCTGAGGGTACTGGGCACCAGCACGGCTCGGGGGTaGTTGGGGTCGATACCAGCGCTCTGCTGCGTCCTCCCAATCACC | + |
|
Preference number: 5 (lower is better) Translates to: MMPILRVLGTSTARG*LGSIPALCCVLPIT Trigger: GGTGATTGGGAGGACGCAGCAGAGCGCTGGTATCGACCCCAATCACCCCCGAGCCGTGCTGGTGCCCAGTACCCTCAGGATCGGCATCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS GCA 90 bp | CCACAGGTGACACAGCTGCTCGTCGGCGCTCCAGAAGGTCACCCGTaGCCACTTCCAGCGGTGATGTCGTACTCGCTTCACACGGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PQVTQLLVGAPEGHP*PLPAVMSYSLHTVD Trigger: GTCCACCGTGTGAAGCGAGTACGACATCACCGCTGGAAGTGGGCACGGGTGACCTTCTGGAGCGCCGACGAGCAGCTGTGTCACCTGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS GCA 90 bp | AGGCGCACCAGCTGGCAGTGGACCCTGACCTCAATGGCCGGGCTGTaGATGACTTCGCCATCGCAGTTCCAGGAGCTTCTGGAGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRTSWQWTLTSMAGL*MTSPSQFQELLEAE Trigger: CTCAGCCTCCAGAAGCTCCTGGAACTGCGATGGCGAAGTCATGCACAGCCCGGCCATTGAGGTCAGGGTCCACTGCCAGCTGGTGCGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CCA 90 bp | CTGCCTGCACACGAAGCACCCAGCCCGGCAGGGTTTATTGTCCCGTaGAGATCCCACCGTGTGCTGTGCTGGGAGGAAGGACAGTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPAHEAPSPAGFIVP*RSHRVLCWEEGQCP Trigger: GGGACACTGTCCTTCCTCCCAGCACAGCACACGGTGGGATCTCCACGGGACAATAAACCCTGCCGGGCTGGGTGCTTCGTGTGCAGGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CCA 90 bp | GACTCTTCCTCGATTCCCCGAGCAAAGAGGCGCACCAGCTGGCAGTaGACCCTGACCTCAATGGCCGGGCTGTGCATGACTTCGCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: DSSSIPRAKRRTSWQ*TLTSMAGLCMTSPS Trigger: CGATGGCGAAGTCATGCACAGCCCGGCCATTGAGGTCAGGGTCCACTGCCAGCTGGTGCGCCTCTTTGCTCGGGGAATCGAGGAAGAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTCTTAGCCAGTGCTTCAGACTGCCTTGGCCAGGGTGTGCAGGCTACCAGGCCCGGCAGGGTTTATaGTCCCGTGGAGATCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PPLSQCFRLPWPGCAGYQARQGL*SRGDPT Trigger: GGTGGGATCTCCACGGGACAATAAACCCTGCCGGGC...CTGGTAGCCTGCACACCCTGGCCAAGGCAGTCTGAAGCACTGGCTAAGAGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS TCA 90 bp | TGCTCGTCGGCGCTCCAGAAGGTCACCCGTGCCCACTTCCAGCGGTaGTGTCGTACTCGCTTCACACGGTGGACTGTGAATGCGAACGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSSALQKVTRAHFQR*CRTRFTRWTVNANG Trigger: TCCGTTCGCATTCACAGTCCACCGTGTGAAGCGAGTACGACATCACCGCTGGAAGTGGGCACGGGTGACCTTCTGGAGCGCCGACGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS TCA 90 bp | CAGCGCTCTGCTGCGTCCTCCCAATCACCCCATGCAGCACCTCGCTaGACATGCCGTCCCCACCTACGCACACGATGCCATCATAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QRSAASSQSPHAAPR*TCRPHLRTRCHHSC Trigger: ACAGCTATGATGGCATCGTGTGCGTAGGTGGGGACGGCATGTTCAGCGAGGTGCTGCATGGGGTGATTGGGAGGACGCAGCAGAGCGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS-3UTR CAA 90 bp | TGGCCGAGAAGCCCCTGGGTTGGGAATGCCTTCAGAGGAAAACTGGTCATGCGCGCCCGGCAGGGTTTATaGTCCCGTGGAGATCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: WPRSPWVGNAFRGKLVMRARQGL*SRGDPT Trigger: GGTGGGATCTCCACGGGACAATAAACCCTGCCGGGC...GCGCATGACCAGTTTTCCTCTGAAGGCATTCCCAACCCAGGGGCTTCTCGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CCA 90 bp | GAGCACTTCCGGATAAGGATGAGGTCAGAAGACCCATCTCCCAGATaGGCAAATGGGGACAGGCCCCCAGGGCTCCGAGGACAAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: EHFRIRMRSEDPSPR*ANGDRPPGLRGQAQ Trigger: CTGTGCTTGTCCTCGGAGCCCTGGGGGCCTGTCCCCATTTGCCCATCTGGGAGATGGGTCTTCTGACCTCATCCTTATCCGGAAGTGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS-3UTR CAA 90 bp | CCTGGGTGTCTTCTCGCTGTGACATGGCCCTGCTCTGCAGGCATGGCTGTGCGGGACATGTTGGTGGCATaGATGGCCAGGAACTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGCLLAVTWPCSAGMAVRDMLVA*MARNFP Trigger: TGGGAAGTTCCTGGCCATCAATGCCACCAACATGTC...CCGCACAGCCATGCCTGCAGAGCAGGGCCATGTCACAGCGAGAAGACACCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS-3UTR CAA 90 bp | CACCCTGGGTGTCTTCTCGCTGTGACATGGCCCTGCTCTGCAGGCATGGCTGTGCAAGCACAGGACATGTaGGTGGCATTGATGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HPGCLLAVTWPCSAGMAVQAQDM*VALMAR Trigger: CCTGGCCATCAATGCCACCAACATGTCCTGTGCTTG...CACAGCCATGCCTGCAGAGCAGGGCCATGTCACAGCGAGAAGACACCCAGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CCA 90 bp | CCGGATAAGGATGAGGTCAGAAGACCCATCTCCCAGATGGGCAAATaGGGACAGGCCCCCAGGGCTCCGAGGACAAGCACAGGACATGTT | + |
|
Preference number: 5 (lower is better) Translates to: PDKDEVRRPISQMGK*GQAPRAPRTSTGHV Trigger: AACATGTCCTGTGCTTGTCCTCGGAGCCCTGGGGGCCTGTCCCCATTTGCCCATCTGGGAGATGGGTCTTCTGACCTCATCCTTATCCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS TCA 90 bp | TTTCCCTCCGAAAGGGTTGATGAATACCAGCAAGTGCTTCGGTCTTaGAGTCAGGCTCTCCAGCAGCCCACGGAGGGTCTGCAGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FPSERVDEYQQVLRS*SQALQQPTEGLQPQ Trigger: CTGTGGCTGCAGACCCTCCGTGGGCTGCTGGAGAGCCTGACTTCAAGACCGAAGCACTTGCTGGTATTCATCAACCCTTTCGGAGGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS TCA 90 bp | GCTGTGCATGACTTCGCCATCGCAGTTCCAGGAGCTTCTGGAGGCTaGGCAAGTGCAAGAGGGTCTGTCCTTGCAGATCTTCCCAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: AVHDFAIAVPGASGG*ASARGSVLADLPKL Trigger: AAGTTTGGGAAGATCTGCAAGGACAGACCCTCTTGCACTTGCTCAGCCTCCAGAAGCTCCTGGAACTGCGATGGCGAAGTCATGCACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS GCA 90 bp | CTTCCAGCGGTGATGTCGTACTCGCTTCACACGGTGGACTGTGAATaGGAACGGATTTTCCATTTTATGCCATCGGCCACTGGAGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPAVMSYSLHTVDCE*ERIFHFMPSATGGV Trigger: CACGCCTCCAGTGGCCGATGGCATAAAATGGAAAATCCGTTCGCATTCACAGTCCACCGTGTGAAGCGAGTACGACATCACCGCTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS CCA 90 bp | CCGGCAGGGTTTATTGTCCCGTGGAGATCCCACCGTGTGCTGTGCTaGGAGGAAGGACAGTGTCCCTTCATAGTACTGATGAGAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PAGFIVPWRSHRVLC*EEGQCPFIVLMREK Trigger: TTTCTCTCTCATCAGTACTATGAAGGGACACTGTCCTTCCTCCCAGCACAGCACACGGTGGGATCTCCACGGGACAATAAACCCTGCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS-3UTR CAA 90 bp | GGACAATTCCAGAGGAAGTCCCACCAAAGGGGTCAAGGTGACCGGGTTTTACCCGACATGTTGGTGGCATaGATGGCCAGGAACTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GQFQRKSHQRGQGDRVLPDMLVA*MARNFP Trigger: TGGGAAGTTCCTGGCCATCAATGCCACCAACATGTC...GGGTAAAACCCGGTCACCTTGACCCCTTTGGTGGGACTTCCTCTGGAATTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS-3UTR CAA 90 bp | AGCAAGTGCCATTTGCTGAGAAGAAGTGAAAAGCGACTCGGAAGCGGGGCCGAGAGGAATCTCAGGAAGTaGAACCTGGAGCACTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SKCHLLRRSEKRLGSGAERNLRK*NLEHFR Trigger: CCGGAAGTGCTCCAGGTTCAACTTCCTGAGATTCCT...CTCGGCCCCGCTTCCGAGTCGCTTTTCACTTCTTCTCAGCAAATGGCACTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS-3UTR CAA 90 bp | AGCAAGTGCCATTTGCTGAGAAGAAGTGAAAAGCGACTCGGAAGCGGGGCCGAGGTCTCCTTGGCTTGGTaGGCATGCTCTGTAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: SKCHLLRRSEKRLGSGAEVSLAW*ACSVMM Trigger: CATCATTACAGAGCATGCCAACCAAGCCAAGGAGAC...CTCGGCCCCGCTTCCGAGTCGCTTTTCACTTCTTCTCAGCAAATGGCACTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR CAA 90 bp | GGACAATTCCAGAGGAAGTCCCACCAAAGGGGTCAAGGTGACCGGGTTTTACCCCGTTTGTGCCCACTGTaGAGTAACACACACAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQFQRKSHQRGQGDRVLPRLCPL*SNTHNL Trigger: CAGATTGTGTGTGTTACTCAACAGTGGGCACAAACG...GGGTAAAACCCGGTCACCTTGACCCCTTTGGTGGGACTTCCTCTGGAATTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS TCA 90 bp | AATCATACCGGACGAGGCCCATCCACCGTTTCTTTTCACTGTCCTTaGTTAAGTCCCCGTAGAAACCGTAGCCCAGCAGAGAAACCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: NHTGRGPSTVSFHCP*LSPRRNRSPAEKPS Trigger: ACTCGGTTTCTCTGCTGGGCTACGGTTTCTACGGGGACTTAATCAAGGACAGTGAAAAGAAACGGTGGATGGGCCTCGTCCGGTATGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR CAA 90 bp | AAGCCAATGCCCGGAACCAGCAAGTGCCATTTGCTGAGAAGAAGTGAAAAGCGACAAGAGGGTCTGTCCTaGCAGATCTTCCCAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: KPMPGTSKCHLLRRSEKRQEGLS*QIFPNF Trigger: GAAGTTTGGGAAGATCTGCAAGGACAGACCCTCTTG...TCGCTTTTCACTTCTTCTCAGCAAATGGCACTTGCTGGTTCCGGGCATTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTTTTATACACATTTCAGATGCATCCATCTGGAGACACAGCACAGGCCATACAAGCACAGGACATGTaGGTGGCATTGATGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLLYTFQMHPSGDTAQAIQAQDM*VALMAR Trigger: CCTGGCCATCAATGCCACCAACATGTCCTGTGCTTG...TATGGCCTGTGCTGTGTCTCCAGATGGATGCATCTGAAATGTGTATAAAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS TCA 90 bp | CAGTGTCCCTTCATAGTACTGATGAGAGAGAAAGGTCTTCAACCCTaGGAAATCATACCGGACGAGGCCCATCCACCGTTTCTTTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: QCPFIVLMREKGLQP*EIIPDEAHPPFLFT Trigger: AGTGAAAAGAAACGGTGGATGGGCCTCGTCCGGTATGATTTCTCAGGGTTGAAGACCTTTCTCTCTCATCAGTACTATGAAGGGACACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
||
| CDS-3UTR CAA 90 bp | TTGAAATATGCACGGTCGGCATGGCTAAAATCTAGGAAGCCAATGCCCGGAACCAAACTTCTGCTTCTCTaGTTCCTTCGAGTCATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKYARSAWLKSRKPMPGTKLLLL*FLRVIV Trigger: GACAATGACTCGAAGGAACAAGAGAAGCAGAAGTTT...GGTTCCGGGCATTGGCTTCCTAGATTTTAGCCATGCCGACCGTGCATATTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
||
| CDS GCA 90 bp | CTGTCTGTGTTGATCTCGTATAAAGTCTCCTTGGCTTGGTTGGCATaGTCTGTAATGATGATCTCCGTAGTGATGGAAGCCAAGGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LSVLISYKVSLAWLA*SVMMISVVMEAKVN Trigger: GTTTACCTTGGCTTCCATCACTACGGAGATCATCATTACAGAGCATGCCAACCAAGCCAAGGAGACTTTATACGAGATCAACACAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCCTTCCCCGTTTGCAAGTCAAGTTTAAGCTGTGTAGGCCTGAATTTCAAACTTCTGCTTCTCTaGTTCCTTCGAGTCATTGTC | + |
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Preference number: 5 (lower is better) Translates to: SVPFPVCKSSLSCVGLNFKLLLL*FLRVIV Trigger: GACAATGACTCGAAGGAACAAGAGAAGCAGAAGTTT...GAAATTCAGGCCTACACAGCTTAAACTTGACTTGCAAACGGGGAAGGGCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS-3UTR CAA 90 bp | CTGTGTAGGCCTGAATTTCACATAAAACCCTTTTATACACATTTCAGATGCATCTTCTTCTTCCAGCTGTaGCTTGCTCTGCCTGCACAC | + |
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Preference number: 5 (lower is better) Translates to: LCRPEFHIKPFYTHFRCIFFFQL*LALPAH Trigger: GTGTGCAGGCAGAGCAAGCAACAGCTGGAAGAAGAA...GATGCATCTGAAATGTGTATAAAAGGGTTTTATGTGAAATTCAGGCCTACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS-3UTR CAA 90 bp | CTGTGTAGGCCTGAATTTCACATAAAACCCTTTTATACACATTTCAGATGCATCAGGAATCTCAGGAAGTaGAACCTGGAGCACTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: LCRPEFHIKPFYTHFRCIRNLRK*NLEHFR Trigger: CCGGAAGTGCTCCAGGTTCAACTTCCTGAGATTCCT...GATGCATCTGAAATGTGTATAAAAGGGTTTTATGTGAAATTCAGGCCTACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS TCA 72 bp | GCCACCAGCGTAGCAGAGCCCGCGCGGGCTCCAGGCTaGCGGCACAGCGTCGCCGTTTCACCCACAGCACGG | + |
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Preference number: 6 (lower is better) Translates to: ATSVAEPARAPG*RHSVAVSPTAR Trigger: CCGTGCTGTGGGTGAAACGGCGACGCTGTGCCGTCAGCCTGGAGCCCGCGCGGGCTCTGCTACGCTGGTGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS CAA 72 bp | TGCCTGCACACGAAGCACCCAGCCCGGCAGGGTTTATaGTCCCGTGGAGATCCCACCGTGTGCTGTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CLHTKHPARQGL*SRGDPTVCCAG Trigger: CCCAGCACAGCACACGGTGGGATCTCCACGGGACAATAAACCCTGCCGGGCTGGGTGCTTCGTGTGCAGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS GCA 72 bp | ACACAGCTGCTCGTCGGCGCTCCAGAAGGTCACCCGTaGCCACTTCCAGCGGTGATGTCGTACTCGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: TQLLVGAPEGHP*PLPAVMSYSLH Trigger: GTGAAGCGAGTACGACATCACCGCTGGAAGTGGGCACGGGTGACCTTCTGGAGCGCCGACGAGCAGCTGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS GCA 72 bp | ATACCAGCGCTCTGCTGCGTCCTCCCAATCACCCCATaGAGCACCTCGCTGAACATGCCGTCCCCACCTACG | + |
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Preference number: 6 (lower is better) Translates to: IPALCCVLPITP*STSLNMPSPPT Trigger: CGTAGGTGGGGACGGCATGTTCAGCGAGGTGCTGCATGGGGTGATTGGGAGGACGCAGCAGAGCGCTGGTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS CCA 72 bp | CACGAAGCACCCAGCCCGGCAGGGTTTATTGTCCCGTaGAGATCCCACCGTGTGCTGTGCTGGGAGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: HEAPSPAGFIVP*RSHRVLCWEEG Trigger: TCCTTCCTCCCAGCACAGCACACGGTGGGATCTCCACGGGACAATAAACCCTGCCGGGCTGGGTGCTTCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CCA 72 bp | TCGATTCCCCGAGCAAAGAGGCGCACCAGCTGGCAGTaGACCCTGACCTCAATGGCCGGGCTGTGCATGACT | + |
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Preference number: 6 (lower is better) Translates to: SIPRAKRRTSWQ*TLTSMAGLCMT Trigger: AGTCATGCACAGCCCGGCCATTGAGGTCAGGGTCCACTGCCAGCTGGTGCGCCTCTTTGCTCGGGGAATCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS GCA 72 bp | AGCTGGCAGTGGACCCTGACCTCAATGGCCGGGCTGTaGATGACTTCGCCATCGCAGTTCCAGGAGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SWQWTLTSMAGL*MTSPSQFQELL Trigger: CAGAAGCTCCTGGAACTGCGATGGCGAAGTCATGCACAGCCCGGCCATTGAGGTCAGGGTCCACTGCCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS TCA 72 bp | GCGCTCCAGAAGGTCACCCGTGCCCACTTCCAGCGGTaGTGTCGTACTCGCTTCACACGGTGGACTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: ALQKVTRAHFQR*CRTRFTRWTVN Trigger: ATTCACAGTCCACCGTGTGAAGCGAGTACGACATCACCGCTGGAAGTGGGCACGGGTGACCTTCTGGAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS CAA 72 bp | AGGCCCCCAGGGCTCCGAGGACAAGCACAGGACATGTaGGTGGCATTGATGGCCAGGAACTTCCCACATGTC | + |
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Preference number: 6 (lower is better) Translates to: RPPGLRGQAQDM*VALMARNFPHV Trigger: GACATGTGGGAAGTTCCTGGCCATCAATGCCACCAACATGTCCTGTGCTTGTCCTCGGAGCCCTGGGGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CAA 90 bp | AATGGGGACAGGCCCCCAGGGCTCCGAGGACAAGCACAGGACATGTaGGTGGCATTGATGGCCAGGAACTTCCCACATGTCACTTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: NGDRPPGLRGQAQDM*VALMARNFPHVTCH Trigger: GTGGCAAGTGACATGTGGGAAGTTCCTGGCCATCAATGCCACCAACATGTCCTGTGCTTGTCCTCGGAGCCCTGGGGGCCTGTCCCCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CAA 90 bp | AGGCCCCCAGGGCTCCGAGGACAAGCACAGGACATGTTGGTGGCATaGATGGCCAGGAACTTCCCACATGTCACTTGCCACTCTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: RPPGLRGQAQDMLVA*MARNFPHVTCHSSI Trigger: AATGGAAGAGTGGCAAGTGACATGTGGGAAGTTCCTGGCCATCAATGCCACCAACATGTCCTGTGCTTGTCCTCGGAGCCCTGGGGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CAA 72 bp | GGTGGCATTGATGGCCAGGAACTTCCCACATGTCACTaGCCACTCTTCCATTTCCTCGGCGTTCTCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GGIDGQELPTCH*PLFHFLGVLQA Trigger: GGCCTGGAGAACGCCGAGGAAATGGAAGAGTGGCAAGTGACATGTGGGAAGTTCCTGGCCATCAATGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS TCA 72 bp | GAAAGGGTTGATGAATACCAGCAAGTGCTTCGGTCTTaGAGTCAGGCTCTCCAGCAGCCCACGGAGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: ERVDEYQQVLRS*SQALQQPTEGL Trigger: CAGACCCTCCGTGGGCTGCTGGAGAGCCTGACTTCAAGACCGAAGCACTTGCTGGTATTCATCAACCCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS TCA 72 bp | GACTTCGCCATCGCAGTTCCAGGAGCTTCTGGAGGCTaGGCAAGTGCAAGAGGGTCTGTCCTTGCAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: DFAIAVPGASGG*ASARGSVLADL Trigger: AAGATCTGCAAGGACAGACCCTCTTGCACTTGCTCAGCCTCCAGAAGCTCCTGGAACTGCGATGGCGAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS GCA 72 bp | GTGGCATTGATGGCCAGGAACTTCCCACATGTCACTTaGCACTCTTCCATTTCCTCGGCGTTCTCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: VALMARNFPHVT*HSSISSAFSRP Trigger: TGGCCTGGAGAACGCCGAGGAAATGGAAGAGTGGCAAGTGACATGTGGGAAGTTCCTGGCCATCAATGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS TCA 72 bp | GGACGAGGCCCATCCACCGTTTCTTTTCACTGTCCTTaGTTAAGTCCCCGTAGAAACCGTAGCCCAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: GRGPSTVSFHCP*LSPRRNRSPAE Trigger: CTCTGCTGGGCTACGGTTTCTACGGGGACTTAATCAAGGACAGTGAAAAGAAACGGTGGATGGGCCTCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS GCA 72 bp | TCTTCTCTTCTTCTTCCAGCTGTTGCTTGCTCTGCCTaGACACGAAGCACCCAGCCCGGCAGGGTTTATTGT | + |
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Preference number: 6 (lower is better) Translates to: SSLLLPAVACSA*TRSTQPGRVYC Trigger: ACAATAAACCCTGCCGGGCTGGGTGCTTCGTGTGCAGGCAGAGCAAGCAACAGCTGGAAGAAGAAGAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CAA 72 bp | GCAAAGCCGATGTCTCTGCGTCGTTTGTGCCCACTGTaGAGTAACACACACAATCTGTGGACCCTGCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: AKPMSLRRLCPL*SNTHNLWTLRV Trigger: TACCCGCAGGGTCCACAGATTGTGTGTGTTACTCAACAGTGGGCACAAACGACGCAGAGACATCGGCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS CAA 90 bp | AACTGGTCCTCCTGGTTCGTGTGCCGGATGAGGAATCTCAGGAAGTaGAACCTGGAGCACTTCCGGATAAGGATGAGGTCAGAAGACCCA | + |
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Preference number: 6 (lower is better) Translates to: NWSSWFVCRMRNLRK*NLEHFRIRMRSEDP Trigger: TGGGTCTTCTGACCTCATCCTTATCCGGAAGTGCTCCAGGTTCAACTTCCTGAGATTCCTCATCCGGCACACGAACCAGGAGGACCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS GCA 72 bp | ACGAAAGTGAAGTCGAACTGGTCCTCCTGGTTCGTGTaGCGGATGAGGAATCTCAGGAAGTTGAACCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: TKVKSNWSSWFV*RMRNLRKLNLE Trigger: CTCCAGGTTCAACTTCCTGAGATTCCTCATCCGGCACACGAACCAGGAGGACCAGTTCGACTTCACTTTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CCA 72 bp | TTTATTGTCCCGTGGAGATCCCACCGTGTGCTGTGCTaGGAGGAAGGACAGTGTCCCTTCATAGTACTGATG | + |
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Preference number: 6 (lower is better) Translates to: FIVPWRSHRVLC*EEGQCPFIVLM Trigger: CATCAGTACTATGAAGGGACACTGTCCTTCCTCCCAGCACAGCACACGGTGGGATCTCCACGGGACAATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CAA 72 bp | TCCTGGTTCGTGTGCCGGATGAGGAATCTCAGGAAGTaGAACCTGGAGCACTTCCGGATAAGGATGAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SWFVCRMRNLRK*NLEHFRIRMRS Trigger: TGACCTCATCCTTATCCGGAAGTGCTCCAGGTTCAACTTCCTGAGATTCCTCATCCGGCACACGAACCAGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CAA 90 bp | GCAAGAGGGTCTGTCCTTGCAGATCTTCCCAAACTTCTGCTTCTCTaGTTCCTTCGAGTCATTGTCCTCGTCTTCCACGTGCTTCGACGT | + |
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Preference number: 6 (lower is better) Translates to: ARGSVLADLPKLLLL*FLRVIVLVFHVLRR Trigger: ACGTCGAAGCACGTGGAAGACGAGGACAATGACTCGAAGGAACAAGAGAAGCAGAAGTTTGGGAAGATCTGCAAGGACAGACCCTCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS TCA 72 bp | AGCGGTGATGTCGTACTCGCTTCACACGGTGGACTGTaGATGCGAACGGATTTTCCATTTTATGCCATCGGC | + |
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Preference number: 6 (lower is better) Translates to: SGDVVLASHGGL*MRTDFPFYAIG Trigger: GCCGATGGCATAAAATGGAAAATCCGTTCGCATTCACAGTCCACCGTGTGAAGCGAGTACGACATCACCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS GCA 72 bp | TTCTGGAGGCTGAGCAAGTGCAAGAGGGTCTGTCCTTaGAGATCTTCCCAAACTTCTGCTTCTCTTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FWRLSKCKRVCP*RSSQTSASLVP Trigger: AGGAACAAGAGAAGCAGAAGTTTGGGAAGATCTGCAAGGACAGACCCTCTTGCACTTGCTCAGCCTCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CAA 72 bp | TTCCCAAACTTCTGCTTCTCTTGTTCCTTCGAGTCATaGTCCTCGTCTTCCACGTGCTTCGACGTGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: FPNFCFSCSFES*SSSSTCFDVKW Trigger: CCACTTCACGTCGAAGCACGTGGAAGACGAGGACAATGACTCGAAGGAACAAGAGAAGCAGAAGTTTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS TCA 72 bp | CACCTACGCACACGATGCCATCATAGCTGTCTGTGTTaGTCTCGTATAAAGTCTCCTTGGCTTGGTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: HLRTRCHHSCLC*SRIKSPWLGWH Trigger: ATGCCAACCAAGCCAAGGAGACTTTATACGAGATCAACACAGACAGCTATGATGGCATCGTGTGCGTAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS GCA 72 bp | CAAGAGGGTCTGTCCTTGCAGATCTTCCCAAACTTCTaGTTCTCTTGTTCCTTCGAGTCATTGTCCTCGTCT | + |
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Preference number: 6 (lower is better) Translates to: QEGLSLQIFPNF*FSCSFESLSSS Trigger: AGACGAGGACAATGACTCGAAGGAACAAGAGAAGCAGAAGTTTGGGAAGATCTGCAAGGACAGACCCTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CAA 72 bp | TCTGTCCTTGCAGATCTTCCCAAACTTCTGCTTCTCTaGTTCCTTCGAGTCATTGTCCTCGTCTTCCACGTG | + |
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Preference number: 6 (lower is better) Translates to: SVLADLPKLLLL*FLRVIVLVFHV Trigger: CACGTGGAAGACGAGGACAATGACTCGAAGGAACAAGAGAAGCAGAAGTTTGGGAAGATCTGCAAGGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS CAA 90 bp | TTGCAGATCTTCCCAAACTTCTGCTTCTCTTGTTCCTTCGAGTCATaGTCCTCGTCTTCCACGTGCTTCGACGTGAAGTGGAATTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LQIFPNFCFSCSFES*SSSSTCFDVKWNFL Trigger: CAAGAAATTCCACTTCACGTCGAAGCACGTGGAAGACGAGGACAATGACTCGAAGGAACAAGAGAAGCAGAAGTTTGGGAAGATCTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044332.16 ENSMUST00000156546.2 |
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| CDS GCA 72 bp | TTGATCTCGTATAAAGTCTCCTTGGCTTGGTTGGCATaGTCTGTAATGATGATCTCCGTAGTGATGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LISYKVSLAWLA*SVMMISVVMEA Trigger: GGCTTCCATCACTACGGAGATCATCATTACAGAGCATGCCAACCAAGCCAAGGAGACTTTATACGAGATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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| CDS CCA 72 bp | CTGTCTGTGTTGATCTCGTATAAAGTCTCCTTGGCTTaGTTGGCATGCTCTGTAATGATGATCTCCGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: LSVLISYKVSLA*LACSVMMISVV Trigger: CACTACGGAGATCATCATTACAGAGCATGCCAACCAAGCCAAGGAGACTTTATACGAGATCAACACAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044332.16 |
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