Pregenerated sensors for CER1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038192Ensembl transcript IDs: ENSMUST00000048430.4
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGAAGAGAGAGGGGGAGAGAGGGAGAGAGAAAGATATTTTCCACTaGTCTTTATATAACTCACATAACATTTCCAGATTGAATAACCCT | + |
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Preference number: 1 (lower is better) Translates to: EKREGERGREKDIFH*SLYNSHNISRLNNP Trigger: AGGGTTATTCAATCTGGAAATGTTATGTGAGTTATATAAAGATCAGTGGAAAATATCTTTCTCTCTCCCTCTCTCCCCCTCTCTCTTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| 3UTR CCA 72 bp | TACATGGGCCACCAAGCAAGCTGCGTCCCACATCTGTaGCAAGGCCCATTCAATAGAATCAAAATATTTTCT | + |
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Preference number: 3 (lower is better) Translates to: YMGHQASCVPHL*QGPFNRIKIFS Trigger: AGAAAATATTTTGATTCTATTGAATGGGCCTTGCCACAGATGTGGGACGCAGCTTGCTTGGTGGCCCATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| 3UTR TCA 72 bp | AATCATCCCCAGCCACATTGTGAGTTTGAGGCCAGCTaGGAATACATAAGACCCTGTCTAAACACAAACATG | + |
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Preference number: 3 (lower is better) Translates to: NHPQPHCEFEAS*EYIRPCLNTNM Trigger: CATGTTTGTGTTTAGACAGGGTCTTATGTATTCTCAGCTGGCCTCAAACTCACAATGTGGCTGGGGATGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| 3UTR CCA 72 bp | TTATGGAGCATGTCTGTAATCCCAGCACTCAGGAATTaGATCAGGAGTTTAAAATCATCCCCAGCCACATTG | + |
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Preference number: 3 (lower is better) Translates to: LWSMSVIPALRN*IRSLKSSPATL Trigger: CAATGTGGCTGGGGATGATTTTAAACTCCTGATCCAATTCCTGAGTGCTGGGATTACAGACATGCTCCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| 3UTR-3UTR CAA 90 bp | ACACGATTGTCCTTCAAAATGACTCACAATGTACTTGGAGACTTATGGCGTTTCCCCTCACTTATTCTGTaGAGGTTTTGCTTTCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: TRLSFKMTHNVLGDLWRFPSLIL*RFCFLL Trigger: CAACAGAAAGCAAAACCTCAACAGAATAAGTGAGGG...GAAACGCCATAAGTCTCCAAGTACATTGTGAGTCATTTTGAAGGACAATCGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| 3UTR CCA 72 bp | TACACGATTGTCCTTCAAAATGACTCACAATGTACTTaGAGACTTATGGCGTTTCCTAGTAACTTCCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: YTIVLQNDSQCT*RLMAFPSNFLK Trigger: CTTGAGGAAGTTACTAGGAAACGCCATAAGTCTCCAAGTACATTGTGAGTCATTTTGAAGGACAATCGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| 3UTR TCA 72 bp | GAGGGGGAGAGAGGGAGAGAGAAAGATATTTTCCACTaGTCTTTATATAACTCACATAACATTTCCAGATTG | + |
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Preference number: 3 (lower is better) Translates to: EGERGREKDIFH*SLYNSHNISRL Trigger: CAATCTGGAAATGTTATGTGAGTTATATAAAGATCAGTGGAAAATATCTTTCTCTCTCCCTCTCTCCCCCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| 3UTR TCA 72 bp | GAAGATTTCGTCTATATACACGATTGTCCTTCAAAATaGCTCACAATGTACTTGGAGACTTATGGCGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: EDFVYIHDCPSK*LTMYLETYGVS Trigger: GGAAACGCCATAAGTCTCCAAGTACATTGTGAGTCATTTTGAAGGACAATCGTGTATATAGACGAAATCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR TCA 90 bp | ATATTCCGGGAAAAGGTTTGGTTCCTAGTGCCTGAGCCCCTTCCACGTGTAAACCTGGAAGTCCAGGGATaGAGGAACCCTGGGAACCAG | + |
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Preference number: 4 (lower is better) Translates to: IFREKVWFLVPEPLPRVNLEVQG*RNPGNQ Trigger: CTGGTTCCCAGGGTTCCTTCATCCCTGGACTTCCAG...GTTTACACGTGGAAGGGGCTCAGGCACTAGGAACCAAACCTTTTCCCGGAATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR TCA 90 bp | ACACGATTGTCCTTCAAAATGACTCACAATGTACTTGGAGACTTATGGCGTTTCCCAGGCTGGTGCCCATaGGGTGTGGCACGGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: TRLSFKMTHNVLGDLWRFPGWCP*GVARPQ Trigger: TTGTGGCCGTGCCACACCTCATGGGCACCAGCCTGG...GAAACGCCATAAGTCTCCAAGTACATTGTGAGTCATTTTGAAGGACAATCGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR CCA 90 bp | ATGTCTGTAATCCCAGCACTCAGGAATTGGATCAGGAGTTTAAAATCATCCCCATTGGTGGGCGAGCAGTaGGAGCAGAAGCTGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: MSVIPALRNWIRSLKSSPLVGEQ*EQKLWA Trigger: TGCCCACAGCTTCTGCTCCCACTGCTCGCCCACCAA...TGGGGATGATTTTAAACTCCTGATCCAATTCCTGAGTGCTGGGATTACAGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR TCA 90 bp | AGAATACATAAGACCCTGTCTAAACACAAACATGTGTGTGTGTGTGTGTGTGTGGGGCAATGGTCTGGTTaGAGGGCACAGTCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RIHKTLSKHKHVCVCVCVGQWSG*RAQSCR Trigger: CCTGCAGGACTGTGCCCTTCAACCAGACCATTGCCC...CACACACACACACACACACACATGTTTGTGTTTAGACAGGGTCTTATGTATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR GCA 90 bp | AGAATACATAAGACCCTGTCTAAACACAAACATGTGTGTGTGTGTGTGTGTGTGCACTTTCCTCCCATCTaGTGGCTGAGTCACGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: RIHKTLSKHKHVCVCVCVHFPPI*WLSHGL Trigger: CAGGCCGTGACTCAGCCAGCAGATGGGAGGAAAGTG...CACACACACACACACACACACATGTTTGTGTTTAGACAGGGTCTTATGTATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR GCA 90 bp | ACACGATTGTCCTTCAAAATGACTCACAATGTACTTGGAGACTTATGGCGTTTCGAAGCTGTGGGCATCTaGCCCTTCTCCGGGAAAACG | + |
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Preference number: 4 (lower is better) Translates to: TRLSFKMTHNVLGDLWRFEAVGI*PFSGKT Trigger: CGTTTTCCCGGAGAAGGGGCAGATGCCCACAGCTTC...GAAACGCCATAAGTCTCCAAGTACATTGTGAGTCATTTTGAAGGACAATCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR CCA 90 bp | TGGAGCATGTCTGTAATCCCAGCACTCAGGAATTGGATCAGGAGTTTAAAATCAGATGCCAGAACCTCTTaGCTTCCTCCTGTAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: WSMSVIPALRNWIRSLKSDARTS*LPPVEV Trigger: CACCTCTACAGGAGGAAGCCAAGAGGTTCTGGCATC...TGATTTTAAACTCCTGATCCAATTCCTGAGTGCTGGGATTACAGACATGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR TCA 90 bp | AGAATACATAAGACCCTGTCTAAACACAAACATGTGTGTGTGTGTGTGTGTGTGAAGGATAAAGAGCCCTaGCTCTGGCAGCCATCCACA | + |
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Preference number: 4 (lower is better) Translates to: RIHKTLSKHKHVCVCVCVKDKEP*LWQPST Trigger: TGTGGATGGCTGCCAGAGTCAGGGCTCTTTATCCTT...CACACACACACACACACACACATGTTTGTGTTTAGACAGGGTCTTATGTATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR TCA 90 bp | TTAAGAGTACCTTCACTATTCCTTCTTCAACGCCAGATAACCAACAGTAAAAACTCAAGTGCACGGTGGTaGATTTGGTGGGCGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LRVPSLFLLQRQITNSKNSSARW*IWWASS Trigger: ACTGCTCGCCCACCAAATTCACCACCGTGCACTTGA...GTTTTTACTGTTGGTTATCTGGCGTTGAAGAAGGAATAGTGAAGGTACTCTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR GCA 90 bp | TTAAGAGTACCTTCACTATTCCTTCTTCAACGCCAGATAACCAACAGTAAAAACCCACGTGGAGATCTCTaGGACCCCTTTCTAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LRVPSLFLLQRQITNSKNPRGDL*DPFLGE Trigger: CTCTCCTAGAAAGGGGTCGCAGAGATCTCCACGTGG...GTTTTTACTGTTGGTTATCTGGCGTTGAAGAAGGAATAGTGAAGGTACTCTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR CCA 90 bp | ATGTCTGTAATCCCAGCACTCAGGAATTGGATCAGGAGTTTAAAATCATCCCCAAGAATCTTCCAAGCCTaGACAGCATCTTCCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: MSVIPALRNWIRSLKSSPRIFQA*TASSLS Trigger: AGAGAGGGAAGATGCTGTCCAGGCTTGGAAGATTCT...TGGGGATGATTTTAAACTCCTGATCCAATTCCTGAGTGCTGGGATTACAGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR CCA 90 bp | AGAATACATAAGACCCTGTCTAAACACAAACATGTGTGTGTGTGTGTGTGTGTGTCCCAGTGTACTTCGTaGCTTTTGATGGGCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: RIHKTLSKHKHVCVCVCVSQCTS*LLMGRM Trigger: CATCCTGCCCATCAAAAGCCACGAAGTACACTGGGA...CACACACACACACACACACACATGTTTGTGTTTAGACAGGGTCTTATGTATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR CCA 90 bp | AGCATGTCTGTAATCCCAGCACTCAGGAATTGGATCAGGAGTTTAAAATCATCCCTCCGGGAAAACGAATaGAACTGCATTTGCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SMSVIPALRNWIRSLKSSLRENE*NCICQS Trigger: GCTTTGGCAAATGCAGTTCCATTCGTTTTCCCGGAG...GGATGATTTTAAACTCCTGATCCAATTCCTGAGTGCTGGGATTACAGACATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| 3UTR CAA 72 bp | ATTATGGAGCATGTCTGTAATCCCAGCACTCAGGAATaGGATCAGGAGTTTAAAATCATCCCCAGCCACATT | + |
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Preference number: 4 (lower is better) Translates to: IMEHVCNPSTQE*DQEFKIIPSHI Trigger: AATGTGGCTGGGGATGATTTTAAACTCCTGATCCAATTCCTGAGTGCTGGGATTACAGACATGCTCCATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR TCA 90 bp | AGAATACATAAGACCCTGTCTAAACACAAACATGTGTGTGTGTGTGTGTGTGTGTCATGGGTTTGTTTTTaGAGCTGGAAGTCCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: RIHKTLSKHKHVCVCVCVSWVCF*SWKSRD Trigger: ATCCCTGGACTTCCAGCTTCAAAAACAAACCCATGA...CACACACACACACACACACACATGTTTGTGTTTAGACAGGGTCTTATGTATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR GCA 90 bp | TGGAGCATGTCTGTAATCCCAGCACTCAGGAATTGGATCAGGAGTTTAAAATCAGAATGGAACTGCATTTaGCAAAGCAAAGGTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: WSMSVIPALRNWIRSLKSEWNCI*QSKGCS Trigger: AGAACAACCTTTGCTTTGGCAAATGCAGTTCCATTC...TGATTTTAAACTCCTGATCCAATTCCTGAGTGCTGGGATTACAGACATGCTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR GCA 90 bp | AGCATGTCTGTAATCCCAGCACTCAGGAATTGGATCAGGAGTTTAAAATCATCCGAAAACGAATGGAACTaGATTTGCCAAAGCAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SMSVIPALRNWIRSLKSSENEWN*ICQSKG Trigger: ACCTTTGCTTTGGCAAATGCAGTTCCATTCGTTTTC...GGATGATTTTAAACTCCTGATCCAATTCCTGAGTGCTGGGATTACAGACATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| 3UTR CAA 72 bp | TCAGAATTTGCCATTGAGGTATTTGTCAGGTTGAATTaGTCACACATACTCTTAGACAATAGGAAGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SEFAIEVFVRLN*SHILLDNRKKP Trigger: GGGCTTCTTCCTATTGTCTAAGAGTATGTGTGACAAATTCAACCTGACAAATACCTCAATGGCAAATTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS TCA 90 bp | CCACGGGGGTTGGGCTGGTGCAGTTCAGCATCAAGTGCACGGTGGTaGATTTGGTGGGCGAGCAGTGGGAGCAGAAGCTGTGGGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: PRGLGWCSSASSARW*IWWASSGSRSCGHL Trigger: CAGATGCCCACAGCTTCTGCTCCCACTGCTCGCCCACCAAATTCACCACCGTGCACTTGATGCTGAACTGCACCAGCCCAACCCCCGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS GCA 90 bp | GCCCATGAGGTGTGGCACGGCCACAAACAGATCCGGCTTGTCTTCTaGCTCCTCGTGGTTGGCCACGTGGAGATCTCTGCGACCCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: AHEVWHGHKQIRLVF*LLVVGHVEISATPF Trigger: GAAAGGGGTCGCAGAGATCTCCACGTGGCCAACCACGAGGAGGCAGAAGACAAGCCGGATCTGTTTGTGGCCGTGCCACACCTCATGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS GCA 90 bp | ACCATCTTGACCACGGGGGTTGGGCTGGTGCAGTTCAGCATCAAGTaGACGGTGGTGAATTTGGTGGGCGAGCAGTGGGAGCAGAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: TILTTGVGLVQFSIK*TVVNLVGEQWEQKL Trigger: CAGCTTCTGCTCCCACTGCTCGCCCACCAAATTCACCACCGTGCACTTGATGCTGAACTGCACCAGCCCAACCCCCGTGGTCAAGATGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 90 bp | GCACGGCCACAAACAGATCCGGCTTGTCTTCTGCCTCCTCGTGGTTaGCCACGTGGAGATCTCTGCGACCCCTTTCTAGGAGAGGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: ARPQTDPACLLPPRG*PRGDLCDPFLGEER Trigger: CCTTTCCTCTCCTAGAAAGGGGTCGCAGAGATCTCCACGTGGCCAACCACGAGGAGGCAGAAGACAAGCCGGATCTGTTTGTGGCCGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 90 bp | TGTGGCACGGCCACAAACAGATCCGGCTTGTCTTCTGCCTCCTCGTaGTTGGCCACGTGGAGATCTCTGCGACCCCTTTCTAGGAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: CGTATNRSGLSSASS*LATWRSLRPLSRRG Trigger: TCCTCTCCTAGAAAGGGGTCGCAGAGATCTCCACGTGGCCAACCACGAGGAGGCAGAAGACAAGCCGGATCTGTTTGTGGCCGTGCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 90 bp | GTCTGGTTGAAGGGCACAGTCCTGCAGGTCTCCCAGTGTACTTCGTaGCTTTTGATGGGCAGGATGACTCCCTGGAACGCCGGGCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: VWLKGTVLQVSQCTS*LLMGRMTPWNAGPF Trigger: AAAGGGCCCGGCGTTCCAGGGAGTCATCCTGCCCATCAAAAGCCACGAAGTACACTGGGAGACCTGCAGGACTGTGCCCTTCAACCAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS TCA 90 bp | GCCAGTAGGAGGCGCTCCTCTCCACGTTCCGTCTTCACCATGCACTaGCACTCTTCTACTTGCATCACCATCTTGACCACGGGGGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: ASRRRSSPRSVFTMH*HSSTCITILTTGVG Trigger: CCCAACCCCCGTGGTCAAGATGGTGATGCAAGTAGAAGAGTGTCAGTGCATGGTGAAGACGGAACGTGGAGAGGAGCGCCTCCTACTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 90 bp | CAGTTCAGCATCAAGTGCACGGTGGTGAATTTGGTGGGCGAGCAGTaGGAGCAGAAGCTGTGGGCATCTGCCCCTTCTCCGGGAAAACGA | + |
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Preference number: 5 (lower is better) Translates to: QFSIKCTVVNLVGEQ*EQKLWASAPSPGKR Trigger: TCGTTTTCCCGGAGAAGGGGCAGATGCCCACAGCTTCTGCTCCCACTGCTCGCCCACCAAATTCACCACCGTGCACTTGATGCTGAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 90 bp | GTCTCCCAGTGTACTTCGTGGCTTTTGATGGGCAGGATGACTCCCTaGAACGCCGGGCCCTTTCTGAACATGAACCGATGCCAGAACCTC | + |
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Preference number: 5 (lower is better) Translates to: VSQCTSWLLMGRMTP*NAGPFLNMNRCQNL Trigger: GAGGTTCTGGCATCGGTTCATGTTCAGAAAGGGCCCGGCGTTCCAGGGAGTCATCCTGCCCATCAAAAGCCACGAAGTACACTGGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS TCA 90 bp | CCGTCTTCACCATGCACTGACACTCTTCTACTTGCATCACCATCTTaGCCACGGGGGTTGGGCTGGTGCAGTTCAGCATCAAGTGCACGG | + |
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Preference number: 5 (lower is better) Translates to: PSSPCTDTLLLASPS*PRGLGWCSSASSAR Trigger: CCGTGCACTTGATGCTGAACTGCACCAGCCCAACCCCCGTGGTCAAGATGGTGATGCAAGTAGAAGAGTGTCAGTGCATGGTGAAGACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS GCA 90 bp | AGGATGACTCCCTGGAACGCCGGGCCCTTTCTGAACATGAACCGATaGCAGAACCTCTTGGCTTCCTCCTGTAGAGGTGATCTCTCCACT | + |
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Preference number: 5 (lower is better) Translates to: RMTPWNAGPFLNMNR*QNLLASSCRGDLST Trigger: AGTGGAGAGATCACCTCTACAGGAGGAAGCCAAGAGGTTCTGGCATCGGTTCATGTTCAGAAAGGGCCCGGCGTTCCAGGGAGTCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 90 bp | GCACTGACACTCTTCTACTTGCATCACCATCTTGACCACGGGGGTTaGGCTGGTGCAGTTCAGCATCAAGTGCACGGTGGTGAATTTGGT | + |
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Preference number: 5 (lower is better) Translates to: ALTLFYLHHHLDHGG*AGAVQHQVHGGEFG Trigger: ACCAAATTCACCACCGTGCACTTGATGCTGAACTGCACCAGCCCAACCCCCGTGGTCAAGATGGTGATGCAAGTAGAAGAGTGTCAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 90 bp | GGGAGCAGAAGCTGTGGGCATCTGCCCCTTCTCCGGGAAAACGAATaGAACTGCATTTGCCAAAGCAAAGGTTGTTCTGGACAACGACTT | + |
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Preference number: 5 (lower is better) Translates to: GSRSCGHLPLLRENE*NCICQSKGCSGQRL Trigger: AAGTCGTTGTCCAGAACAACCTTTGCTTTGGCAAATGCAGTTCCATTCGTTTTCCCGGAGAAGGGGCAGATGCCCACAGCTTCTGCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS TCA 90 bp | GAACTGCATTTGCCAAAGCAAAGGTTGTTCTGGACAACGACTTTTTaGCAGTCTTCATGGGCAATGGTCTGGTTGAAGGGCACAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: ELHLPKQRLFWTTTF*QSSWAMVWLKGTVL Trigger: CAGGACTGTGCCCTTCAACCAGACCATTGCCCATGAAGACTGTCAAAAAGTCGTTGTCCAGAACAACCTTTGCTTTGGCAAATGCAGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR CAA 90 bp | AGCATGTCTGTAATCCCAGCACTCAGGAATTGGATCAGGAGTTTAAAATCATCCCGAATGGAACTGCATTaGCCAAAGCAAAGGTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: SMSVIPALRNWIRSLKSSRMELH*PKQRLF Trigger: GAACAACCTTTGCTTTGGCAAATGCAGTTCCATTCG...GGATGATTTTAAACTCCTGATCCAATTCCTGAGTGCTGGGATTACAGACATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS-3UTR CAA 90 bp | AGAATACATAAGACCCTGTCTAAACACAAACATGTGTGTGTGTGTGTGTGTGTGTTGCCAAAGCAAAGGTaGTTCTGGACAACGACTTTT | + |
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Preference number: 5 (lower is better) Translates to: RIHKTLSKHKHVCVCVCVLPKQR*FWTTTF Trigger: AAAAGTCGTTGTCCAGAACAACCTTTGCTTTGGCAA...CACACACACACACACACACACATGTTTGTGTTTAGACAGGGTCTTATGTATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 90 bp | AGGCTGGTGCCCATGAGGTGTGGCACGGCCACAAACAGATCCGGCTaGTCTTCTGCCTCCTCGTGGTTGGCCACGTGGAGATCTCTGCGA | + |
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Preference number: 6 (lower is better) Translates to: RLVPMRCGTATNRSG*SSASSWLATWRSLR Trigger: TCGCAGAGATCTCCACGTGGCCAACCACGAGGAGGCAGAAGACAAGCCGGATCTGTTTGTGGCCGTGCCACACCTCATGGGCACCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS GCA 72 bp | GTGTGGCACGGCCACAAACAGATCCGGCTTGTCTTCTaGCTCCTCGTGGTTGGCCACGTGGAGATCTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: VWHGHKQIRLVF*LLVVGHVEISA Trigger: CGCAGAGATCTCCACGTGGCCAACCACGAGGAGGCAGAAGACAAGCCGGATCTGTTTGTGGCCGTGCCACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS GCA 72 bp | ACCACGGGGGTTGGGCTGGTGCAGTTCAGCATCAAGTaGACGGTGGTGAATTTGGTGGGCGAGCAGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: TTGVGLVQFSIK*TVVNLVGEQWE Trigger: CTCCCACTGCTCGCCCACCAAATTCACCACCGTGCACTTGATGCTGAACTGCACCAGCCCAACCCCCGTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 72 bp | CCCATGAGGTGTGGCACGGCCACAAACAGATCCGGCTaGTCTTCTGCCTCCTCGTGGTTGGCCACGTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: PMRCGTATNRSG*SSASSWLATWR Trigger: TCTCCACGTGGCCAACCACGAGGAGGCAGAAGACAAGCCGGATCTGTTTGTGGCCGTGCCACACCTCATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 72 bp | ACAGTCCTGCAGGTCTCCCAGTGTACTTCGTGGCTTTaGATGGGCAGGATGACTCCCTGGAACGCCGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: TVLQVSQCTSWL*MGRMTPWNAGP Trigger: GGGCCCGGCGTTCCAGGGAGTCATCCTGCCCATCAAAAGCCACGAAGTACACTGGGAGACCTGCAGGACTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 72 bp | ATCAAGTGCACGGTGGTGAATTTGGTGGGCGAGCAGTaGGAGCAGAAGCTGTGGGCATCTGCCCCTTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: IKCTVVNLVGEQ*EQKLWASAPSP Trigger: CGGAGAAGGGGCAGATGCCCACAGCTTCTGCTCCCACTGCTCGCCCACCAAATTCACCACCGTGCACTTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 90 bp | GGCACGGCCACAAACAGATCCGGCTTGTCTTCTGCCTCCTCGTGGTaGGCCACGTGGAGATCTCTGCGACCCCTTTCTAGGAGAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: GTATNRSGLSSASSW*ATWRSLRPLSRRGK Trigger: CTTTCCTCTCCTAGAAAGGGGTCGCAGAGATCTCCACGTGGCCAACCACGAGGAGGCAGAAGACAAGCCGGATCTGTTTGTGGCCGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 90 bp | TTGAAGGGCACAGTCCTGCAGGTCTCCCAGTGTACTTCGTGGCTTTaGATGGGCAGGATGACTCCCTGGAACGCCGGGCCCTTTCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LKGTVLQVSQCTSWL*MGRMTPWNAGPFLN Trigger: GTTCAGAAAGGGCCCGGCGTTCCAGGGAGTCATCCTGCCCATCAAAAGCCACGAAGTACACTGGGAGACCTGCAGGACTGTGCCCTTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS GCA 72 bp | GGTGGGCGAGCAGTGGGAGCAGAAGCTGTGGGCATCTaGCCCTTCTCCGGGAAAACGAATGGAACTGCATTT | + |
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Preference number: 6 (lower is better) Translates to: GGRAVGAEAVGI*PFSGKTNGTAF Trigger: AAATGCAGTTCCATTCGTTTTCCCGGAGAAGGGGCAGATGCCCACAGCTTCTGCTCCCACTGCTCGCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 72 bp | TCCGGCTTGTCTTCTGCCTCCTCGTGGTTGGCCACGTaGAGATCTCTGCGACCCCTTTCTAGGAGAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: SGLSSASSWLAT*RSLRPLSRRGK Trigger: CTTTCCTCTCCTAGAAAGGGGTCGCAGAGATCTCCACGTGGCCAACCACGAGGAGGCAGAAGACAAGCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 72 bp | GCCACAAACAGATCCGGCTTGTCTTCTGCCTCCTCGTaGTTGGCCACGTGGAGATCTCTGCGACCCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: ATNRSGLSSASS*LATWRSLRPLS Trigger: AGAAAGGGGTCGCAGAGATCTCCACGTGGCCAACCACGAGGAGGCAGAAGACAAGCCGGATCTGTTTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 72 bp | AAGGGCACAGTCCTGCAGGTCTCCCAGTGTACTTCGTaGCTTTTGATGGGCAGGATGACTCCCTGGAACGCC | + |
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Preference number: 6 (lower is better) Translates to: KGTVLQVSQCTS*LLMGRMTPWNA Trigger: GGCGTTCCAGGGAGTCATCCTGCCCATCAAAAGCCACGAAGTACACTGGGAGACCTGCAGGACTGTGCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS TCA 72 bp | TTGGGCTGGTGCAGTTCAGCATCAAGTGCACGGTGGTaGATTTGGTGGGCGAGCAGTGGGAGCAGAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LGWCSSASSARW*IWWASSGSRSC Trigger: ACAGCTTCTGCTCCCACTGCTCGCCCACCAAATTCACCACCGTGCACTTGATGCTGAACTGCACCAGCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 72 bp | CAAACAGATCCGGCTTGTCTTCTGCCTCCTCGTGGTTaGCCACGTGGAGATCTCTGCGACCCCTTTCTAGGA | + |
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Preference number: 6 (lower is better) Translates to: QTDPACLLPPRG*PRGDLCDPFLG Trigger: TCCTAGAAAGGGGTCGCAGAGATCTCCACGTGGCCAACCACGAGGAGGCAGAAGACAAGCCGGATCTGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 72 bp | GTGAATTTGGTGGGCGAGCAGTGGGAGCAGAAGCTGTaGGCATCTGCCCCTTCTCCGGGAAAACGAATGGAA | + |
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Preference number: 6 (lower is better) Translates to: VNLVGEQWEQKL*ASAPSPGKRME Trigger: TTCCATTCGTTTTCCCGGAGAAGGGGCAGATGCCCACAGCTTCTGCTCCCACTGCTCGCCCACCAAATTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 72 bp | GTTTTTGAAGCTGGAAGTCCAGGGATGAAGGAACCCTaGGAACCAGCCAGTAGGAGGCGCTCCTCTCCACGT | + |
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Preference number: 6 (lower is better) Translates to: VFEAGSPGMKEP*EPASRRRSSPR Trigger: ACGTGGAGAGGAGCGCCTCCTACTGGCTGGTTCCCAGGGTTCCTTCATCCCTGGACTTCCAGCTTCAAAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 72 bp | ACAAACAGATCCGGCTTGTCTTCTGCCTCCTCGTGGTaGGCCACGTGGAGATCTCTGCGACCCCTTTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: TNRSGLSSASSW*ATWRSLRPLSR Trigger: CCTAGAAAGGGGTCGCAGAGATCTCCACGTGGCCAACCACGAGGAGGCAGAAGACAAGCCGGATCTGTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 90 bp | CTCCTCTCCACGTTCCGTCTTCACCATGCACTGACACTCTTCTACTaGCATCACCATCTTGACCACGGGGGTTGGGCTGGTGCAGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LLSTFRLHHALTLFY*HHHLDHGGWAGAVQ Trigger: CTGAACTGCACCAGCCCAACCCCCGTGGTCAAGATGGTGATGCAAGTAGAAGAGTGTCAGTGCATGGTGAAGACGGAACGTGGAGAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 72 bp | TGTACTTCGTGGCTTTTGATGGGCAGGATGACTCCCTaGAACGCCGGGCCCTTTCTGAACATGAACCGATGC | + |
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Preference number: 6 (lower is better) Translates to: CTSWLLMGRMTP*NAGPFLNMNRC Trigger: GCATCGGTTCATGTTCAGAAAGGGCCCGGCGTTCCAGGGAGTCATCCTGCCCATCAAAAGCCACGAAGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 72 bp | CTCTTCTACTTGCATCACCATCTTGACCACGGGGGTTaGGCTGGTGCAGTTCAGCATCAAGTGCACGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LFYLHHHLDHGG*AGAVQHQVHGG Trigger: ACCACCGTGCACTTGATGCTGAACTGCACCAGCCCAACCCCCGTGGTCAAGATGGTGATGCAAGTAGAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 90 bp | TGGAACGCCGGGCCCTTTCTGAACATGAACCGATGCCAGAACCTCTaGGCTTCCTCCTGTAGAGGTGATCTCTCCACTTTCCTCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: WNAGPFLNMNRCQNL*ASSCRGDLSTFLPS Trigger: AGATGGGAGGAAAGTGGAGAGATCACCTCTACAGGAGGAAGCCAAGAGGTTCTGGCATCGGTTCATGTTCAGAAAGGGCCCGGCGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS TCA 72 bp | CCATGCACTGACACTCTTCTACTTGCATCACCATCTTaGCCACGGGGGTTGGGCTGGTGCAGTTCAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: PCTDTLLLASPS*PRGLGWCSSAS Trigger: TGATGCTGAACTGCACCAGCCCAACCCCCGTGGTCAAGATGGTGATGCAAGTAGAAGAGTGTCAGTGCATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS TCA 72 bp | AGGCGCTCCTCTCCACGTTCCGTCTTCACCATGCACTaGCACTCTTCTACTTGCATCACCATCTTGACCACG | + |
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Preference number: 6 (lower is better) Translates to: RRSSPRSVFTMH*HSSTCITILTT Trigger: CGTGGTCAAGATGGTGATGCAAGTAGAAGAGTGTCAGTGCATGGTGAAGACGGAACGTGGAGAGGAGCGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 72 bp | ACGTTCCGTCTTCACCATGCACTGACACTCTTCTACTaGCATCACCATCTTGACCACGGGGGTTGGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: TFRLHHALTLFY*HHHLDHGGWAG Trigger: ACCAGCCCAACCCCCGTGGTCAAGATGGTGATGCAAGTAGAAGAGTGTCAGTGCATGGTGAAGACGGAACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 72 bp | GGGCCCTTTCTGAACATGAACCGATGCCAGAACCTCTaGGCTTCCTCCTGTAGAGGTGATCTCTCCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: GPFLNMNRCQNL*ASSCRGDLSTF Trigger: GAAAGTGGAGAGATCACCTCTACAGGAGGAAGCCAAGAGGTTCTGGCATCGGTTCATGTTCAGAAAGGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS GCA 72 bp | GGGCATCTGCCCCTTCTCCGGGAAAACGAATGGAACTaGATTTGCCAAAGCAAAGGTTGTTCTGGACAACGA | + |
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Preference number: 6 (lower is better) Translates to: GHLPLLRENEWN*ICQSKGCSGQR Trigger: TCGTTGTCCAGAACAACCTTTGCTTTGGCAAATGCAGTTCCATTCGTTTTCCCGGAGAAGGGGCAGATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CCA 72 bp | AGCTGTGGGCATCTGCCCCTTCTCCGGGAAAACGAATaGAACTGCATTTGCCAAAGCAAAGGTTGTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SCGHLPLLRENE*NCICQSKGCSG Trigger: TCCAGAACAACCTTTGCTTTGGCAAATGCAGTTCCATTCGTTTTCCCGGAGAAGGGGCAGATGCCCACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 90 bp | GGAACTGCATTTGCCAAAGCAAAGGTTGTTCTGGACAACGACTTTTaGACAGTCTTCATGGGCAATGGTCTGGTTGAAGGGCACAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GTAFAKAKVVLDNDF*TVFMGNGLVEGHSP Trigger: AGGACTGTGCCCTTCAACCAGACCATTGCCCATGAAGACTGTCAAAAAGTCGTTGTCCAGAACAACCTTTGCTTTGGCAAATGCAGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS TCA 72 bp | TTGCCAAAGCAAAGGTTGTTCTGGACAACGACTTTTTaGCAGTCTTCATGGGCAATGGTCTGGTTGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LPKQRLFWTTTF*QSSWAMVWLKG Trigger: GCCCTTCAACCAGACCATTGCCCATGAAGACTGTCAAAAAGTCGTTGTCCAGAACAACCTTTGCTTTGGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 72 bp | TCTGCCCCTTCTCCGGGAAAACGAATGGAACTGCATTaGCCAAAGCAAAGGTTGTTCTGGACAACGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: SAPSPGKRMELH*PKQRLFWTTTF Trigger: AAAAGTCGTTGTCCAGAACAACCTTTGCTTTGGCAAATGCAGTTCCATTCGTTTTCCCGGAGAAGGGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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| CDS CAA 72 bp | TTTGCCAAAGCAAAGGTTGTTCTGGACAACGACTTTTaGACAGTCTTCATGGGCAATGGTCTGGTTGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: FAKAKVVLDNDF*TVFMGNGLVEG Trigger: CCCTTCAACCAGACCATTGCCCATGAAGACTGTCAAAAAGTCGTTGTCCAGAACAACCTTTGCTTTGGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048430.4 |
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